Pt-RGA-II24.59 (Potri.001G422800) [POPLAR]

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| Symbol | Pt-RGA-II24.59 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Arabidopsis homologues
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Paralogs
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Flax homologues |
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Representative CDS sequence |
>Potri.001G422800.15 pacid=42793487 polypeptide=Potri.001G422800.15.p locus=Potri.001G422800 ID=Potri.001G422800.15.v4.1 annot-version=v4.1
ATGGCTATCGAAAGTGTGGGTGGATCCATTATATCTAAGATAGCAGAACTCATGGTGGAACCAGTGGGAAGGCAGTTCCGTTACATGTTCTGTTTCAACA
ATTTTGTTGAAGAATTCAAAGAACAAAAGGAGAACCTTGCTTTAGCACTAGATGGTCTGCAAAAAGATGTCGAAGCTGCTGAAAGGAATGCTGAAGAAAT
TAAGAAAGTTGTCAAAAAGTGGATGGAAGATGCAAACAGCAAAATTGAAGGTGCGAAGCCCTTGGAAAATGAAATAGGAAGAAATGGCAAATGCTTTCCT
TGGTGCCCAAACTGCATGCGACAATTCAAGTTAAGCAAGGCACTGGCCAAGAAGTCGGAGACTTTCAGAGAACTTTTAGAAAAAAAGCCTACTAAAGTGT
CCTACAGAGCTCATCCTCAGCCCATAGAATTTCTTCCATCAAAGGATTTCACGCCCTCAGAATCTTCAAAAGAAGCTTTGGAACAGATTATGAAAGCTCT
CAAAGATGACACCGTCAATATGATCGGACTGTACGGCATGGGAGGGGTGGGTAAAACCACCCTGGTGAAAGAAGTAGGCAGGAGAGCCAAAGAGTTGCAG
CTGTTTGATGAAGTTTTGATGGCTACGGTGTCGCAGAATCCAAATGTCACAGACATTCAGCACCAAATGGCAGATAAGTTAGGTCTGGATATTAAAGAAA
AGAGTACTAATGCAGGGAGAGCAGATCGATTATGGCAGAGACTGAAGCAAGTGGAGAAGATGCTTATTATCCTAGATGATGTTTGGAAATATATTGACTT
GAAAGAGATAGGGATCCCAATTGGTGATGATCACAGGGGTTGTAAAATACTTCTAACAACACGTCGTACAAATGTATGTTCTTCTATGAAATGCCAGCAA
AAAGTGTTCTTAAGAGAATTACCTGAAAAAGAAGCATGGGATTTATTCAGAATCAATGCAGATTTACTTGATGGGCACCCTACCTTGAACACAGTGGCAA
GGGAGGTTGCGAGAGAATGTCAAGGCTTGCCCATAGCACTTGTGACAGTGGGAAGGGCTCTAAGAGATCAATCTGCACTTCAGTGGGAATTAGCGTGTAG
ACAGCTCAAAGAATCTCAATTTGCGCGCATGGAACAAATTGACGAAAAAAATAATGCTTATACATGTCTTAAGTTGAGCTATGATTATTTGAAGCTCCAG
GAAACCAAGTCATGTTTCGTGCTATGCTGTTTATTTCCAGAAGACTATGACATTCCAATCCAGGACTTGACGAGATATGCAGTTGGCTATGGGTTACATC
AAGATGCGGAGCCCATTGAAGATGCAAGGAAACGAGTTTCTGTGGCAATCGAAAACCTCAAAGATTGTTGCATGCTGTTGGGCTCTGAAACTGAAGAACA
TGTGAAAATGCATGACCTTGTTCGTGATGTTGCTATTCACATAGCATCAGAAGAATATGGATTCATGGTAAAGGCTGGCTTAGGGTTAGAGAAGTGGCCA
ATGAGCGATACAAGCTTTGAAGGTTGTACAACAATTTCGTTAATGGGCAATCAACTAGCAGAACTTCCTGAAGGATTGGTATGTCCAAAGCTCAAAGTTC
TATTGTTAGAAGTGGATTCTGGTTTGAATGTTCCAGAGAGGTTTTTTGAAGGGATGAAAGAAATTGAAGTTTTGTCTCTGAAGGGAGGGTGTTTGTCATT
GCAATCACTTGAACTCTCAACGAAACTTCAATCGTTGGTGTTGATCTCGTGTAATTGCAAGGACCTCATTCGGTTGAGAAAGCTGCAGAGACTTAAGATT
CTTGGTCTTGTGTCGTGCTCATCCATTGAAGAATTACCTGATGAAATAGGAGAGCTCAAGGAGTTAAGGTTGTTGGATGTGACAGGTTGTGAAAGGCTAA
GAAGGATCCCTGTGAATTTGATTGGAAGGTTGAAGAAGTTAGAAGAGCTGTTGATCGGGCATCGCAGCTTTGATGGATGGGATGATGTTGGATGTGACAG
CACAGGAGGAATGAATGCAAGACTAACAGAACTAAATTCGTTGTCTCAGTTAGCCGTATTATCATTGAGGATACCGAAGGTTGAATGCATTCCTAGAGAT
TTTGTTTTTCCAGATAGCTTGCGCAAATATGATATAATATTAGGGAATGCTGATGGATATTATAGAATGTTTAGGGATCGCTACCCAACCTCCTTAATTT
CGACAGCTGGTACATCCTTGAATGCGAAGACATTTGAGCAATTGTTTTTACATAAATTAGAATCTGTACAAGTGAGCAGTTGTGGGGATGTTTTCACTCT
GTTTCCAGCAAGATTGCGGCAAGGTTTTAAAAATCTAAAGGAGGTGATTGTTGACAGCTGTAAATCATTGAAAGAGGTATTTGAATTGGGTGAGGCTGAT
GAAGGAAGCAGTGAGGAGAAGGAGATGCCGCTGCTGTCATCTTTAACAGAGTTAAAGCTGAAAATATTACCTGAGCTAAAATGCATATGGAAGGGGCCCA
CCAGACATGTCAACCTCCAAAGTCTTATTAATCTGGAGTTGTATGCTCTCGACAAACTGACATTTATCTTCACACCGTCCCTTGCTTACAGTCTGCCAAA
GCTACAAAGACTTTACATAAGTGATTGTGGTGAATTGAAGCATATTATCAGAGAAGAGGATGGTGAAAGGGAAATAATTCCAGAGTCTCCTTGCTTCCCA
CAATTAAAAAATATCTACATATATTTCTGTGATAAACTGGAATATGTCTTCCCAGTCTCTTTGTCTCATAACAGAGATGGCATCATCAAGTTCCCTCAAC
TAAGAGAATTGTCTCTTGGGCTCAGATCAAATTACAGCTTTTTAGGTCCAAGGAATTTTGATGCTCAATTGCCTTTGCAATACTTAGCCATTCAAGGCCA
CGAAGAAGTGGGTAATTGGTTGGCACAGCTACAACAAAACGGCTTCTTACAAAGATTAGAATTTGTACGAGTGGACGATTGTGGGGATGTTCGCCCTCCG
TTTCCAGCAAAATTGCTGCGAGCTTTGAAAAATCTAAAGAGTGTGGAAATTGAGGACTGCAAATCATTGGAAGAGGTATTTGAATTAGGTGAGCCTGATG
AAGGAAGTAGTGAGGAGAAGGAGCTGCTGTCATCTTTAACAATGTTAGATCTGCAAAGGTTACCTGAGGTCAAATGCATATGGAAGGGGCCCACCAGATA
TGTCAGCCTCCAAAGTCTTAATATTCTGAAATTGAGATCTCTCGACAAACTGACATTTATCTTCACACCGTCCCTGGCTCGAAGTCTGCCAAAGCTAGCA
GGCCTCTACATAAATAATTGCGCTGAATTGCAGCATATTATCAGAGAAGAGGCTGGTGAAAGGGAAATAATTCAAGAGTCTCCTGGCTTCCCAGAATTAA
AAACTATCATCATAGAAGAGTGTGGTAAACTGGAATATGTCTTCCCTGTATCTGTGTCTCCAAGCCTTCTGAACCTGGAAGAGATGCGGATTTTTAAAGC
TCATAATTTAAAGCAAATATTTTACAGTGTAGAAGGAGATGCACTCACCACAGATGGCATCATCAAGTTCCCTAAGCTAAGAAAATTGTCTATTTCAAAT
TGCAGCTTCTTTGGTCCAAAGAATTTTGCTGCCCAATTGCCTTCCTTGCAATATCTAAAAATTGATGGCCACAAAGAATTGGGAAATTTGTCTGCACAGA
TCCAAGGGTTGACAAATTTGAAAACATTACGCTTGAAGTCTCTGCCTGACATGAGTTGTATATGGAAGGGTCTCGTGCTGAGCAAATTGACTACTTTGGA
GATGGCCGTCCATGGGCAGCAAAACGACTTCTTACAAAGATTAAAATATGTAGAAGTGGACGATTGTGGGGATGTTCGCGCTCCGTTTCCAGCAAAATTG
CTGCGAGCTTTGAAAATTCTAAGCAGTGTGCAAATTGAGGACTGCAAATCATTGGAAGAGGTATTTGAATTGGGTGAGCCTTATGAAGGAAGCAGTGAGG
AGAAGGAGCTGCCGCTTCCATCATCTTTAACCTGGTTACGGCTGTACCAGTTACCTGAGCTCAAATGCATATGGAAAGGGCCTACCAGCCATGTCAGCCT
CCAAAGTCTTGCTTATCTGTATTTGAATTCTCTGGACAAACTGACATTTATCTTTACACCGTCCCTCGTTCAGAGTCTACCACAGCTAGAAAGCCTTCAC
ATAAATAAATGCGGTGAATTGAAGCATATTATCAGAGAAGAGGATGGTGAAAGGGAAATAATTCCAGAGCCTCCTTGCTTCCCAAAATTAAAAACTATCA
GCATAAAAGAGTGTGGTAAACTGGAATATGTCTTCCCTGTATCTGTGTCTCCAAGCCTTCTGAACCTGGAAGAGATGCAGATTTTTGAAGCTCATAATTT
AAAGCAAATATTTTACAGTGGAGAAGGAGATGCACTCACCAGAGATGCCATCATCAAGTTCCCTAAGCTAAGAAGATTGTCTCTTTCAAATTGCAGCTTC
TTTGCTACAAAGAATTTTGCTGCCCAATTGCCTTCCTTGCAAATTCTAGAAATTGATGGCCACAAAGAATTGGGAAATTTGTTTGCACAGCTCCAAGGGT
TCACAAATTTGAAAGAATTACGCTTGCACCATCTGCCTGACACGAGGTGTGTATGGAAGGGTCTGAGCAAATTGACTACTTTGAAGCAAAACGGCTTCTT
ACAAAGATTAAAATTTGTACGAGTGGACGATTGTGGGGATGTTCGCACTCCGTTTCCAGCAAAATTGCTGCGAGCTTTGAACAATCTAAAGAAGGTGATT
GTTGACAGCTGTAAATCATTGGAAGAGGTATTTGAATTAGGTGAGCCTGATGAAGGAAGCAGTGAGGAGAAGGAGCTACCGCTTCTGTCATCTTTAACAG
AGTTACGGCTGTCATGTTTACCTGAGCTCAAATGTATATGGAAGGGGCCATCTAGACATGTCAGCCTTCAAAGTCTTAATCGTCTGAATTTGGAGTCTCT
CAACAAACTGACATTTATCTTCACACCGTCCCTCGCTCGAAGTCTGCCAAAGCTAGAAAGACTTTACATAAGTAAATGCGGTCAATTGAAGCATATTATC
AGAGAAGAGAATGGTGAAAAGGAAATAATTCCAGAGTCTCCTGGGCAGGATGATCAAGCTTCACCTATCAATGTTGAGAAGGAGATAGTGCTTCCTAATC
TAAAGGAGTTGTCGCTAGAACAATTATCAAGTATTGTCTGTTTTAGTTTCGGATGGTGTGATTATTTCTTATTCCCTCGTTTGGAGAAGTTGAAGGTCCA
TCAATGTCCAAGGCTGACCACAAAATTTGCTACTACACCAGATGGTTCAATGAGTGCTCAATCAGAGGTATCTGAAGTAGCTGAATATTCAAGCTTTAAA
AGAGAGTGGACCAGAAATAATGGGTGGAAAGAAGTAGAAGAAGAAGAAGAAGAAGAAGAAGATGATGATGATGTTGGGTCAGAAGAGGAAGAGGAAGAGG
AGGAAGAAGAAGAAGATGATGATGATGATTGCTAG
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AA sequence
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>Potri.001G422800.15 pacid=42793487 polypeptide=Potri.001G422800.15.p locus=Potri.001G422800 ID=Potri.001G422800.15.v4.1 annot-version=v4.1
MAIESVGGSIISKIAELMVEPVGRQFRYMFCFNNFVEEFKEQKENLALALDGLQKDVEAAERNAEEIKKVVKKWMEDANSKIEGAKPLENEIGRNGKCFP
WCPNCMRQFKLSKALAKKSETFRELLEKKPTKVSYRAHPQPIEFLPSKDFTPSESSKEALEQIMKALKDDTVNMIGLYGMGGVGKTTLVKEVGRRAKELQ
LFDEVLMATVSQNPNVTDIQHQMADKLGLDIKEKSTNAGRADRLWQRLKQVEKMLIILDDVWKYIDLKEIGIPIGDDHRGCKILLTTRRTNVCSSMKCQQ
KVFLRELPEKEAWDLFRINADLLDGHPTLNTVAREVARECQGLPIALVTVGRALRDQSALQWELACRQLKESQFARMEQIDEKNNAYTCLKLSYDYLKLQ
ETKSCFVLCCLFPEDYDIPIQDLTRYAVGYGLHQDAEPIEDARKRVSVAIENLKDCCMLLGSETEEHVKMHDLVRDVAIHIASEEYGFMVKAGLGLEKWP
MSDTSFEGCTTISLMGNQLAELPEGLVCPKLKVLLLEVDSGLNVPERFFEGMKEIEVLSLKGGCLSLQSLELSTKLQSLVLISCNCKDLIRLRKLQRLKI
LGLVSCSSIEELPDEIGELKELRLLDVTGCERLRRIPVNLIGRLKKLEELLIGHRSFDGWDDVGCDSTGGMNARLTELNSLSQLAVLSLRIPKVECIPRD
FVFPDSLRKYDIILGNADGYYRMFRDRYPTSLISTAGTSLNAKTFEQLFLHKLESVQVSSCGDVFTLFPARLRQGFKNLKEVIVDSCKSLKEVFELGEAD
EGSSEEKEMPLLSSLTELKLKILPELKCIWKGPTRHVNLQSLINLELYALDKLTFIFTPSLAYSLPKLQRLYISDCGELKHIIREEDGEREIIPESPCFP
QLKNIYIYFCDKLEYVFPVSLSHNRDGIIKFPQLRELSLGLRSNYSFLGPRNFDAQLPLQYLAIQGHEEVGNWLAQLQQNGFLQRLEFVRVDDCGDVRPP
FPAKLLRALKNLKSVEIEDCKSLEEVFELGEPDEGSSEEKELLSSLTMLDLQRLPEVKCIWKGPTRYVSLQSLNILKLRSLDKLTFIFTPSLARSLPKLA
GLYINNCAELQHIIREEAGEREIIQESPGFPELKTIIIEECGKLEYVFPVSVSPSLLNLEEMRIFKAHNLKQIFYSVEGDALTTDGIIKFPKLRKLSISN
CSFFGPKNFAAQLPSLQYLKIDGHKELGNLSAQIQGLTNLKTLRLKSLPDMSCIWKGLVLSKLTTLEMAVHGQQNDFLQRLKYVEVDDCGDVRAPFPAKL
LRALKILSSVQIEDCKSLEEVFELGEPYEGSSEEKELPLPSSLTWLRLYQLPELKCIWKGPTSHVSLQSLAYLYLNSLDKLTFIFTPSLVQSLPQLESLH
INKCGELKHIIREEDGEREIIPEPPCFPKLKTISIKECGKLEYVFPVSVSPSLLNLEEMQIFEAHNLKQIFYSGEGDALTRDAIIKFPKLRRLSLSNCSF
FATKNFAAQLPSLQILEIDGHKELGNLFAQLQGFTNLKELRLHHLPDTRCVWKGLSKLTTLKQNGFLQRLKFVRVDDCGDVRTPFPAKLLRALNNLKKVI
VDSCKSLEEVFELGEPDEGSSEEKELPLLSSLTELRLSCLPELKCIWKGPSRHVSLQSLNRLNLESLNKLTFIFTPSLARSLPKLERLYISKCGQLKHII
REENGEKEIIPESPGQDDQASPINVEKEIVLPNLKELSLEQLSSIVCFSFGWCDYFLFPRLEKLKVHQCPRLTTKFATTPDGSMSAQSEVSEVAEYSSFK
REWTRNNGWKEVEEEEEEEEDDDDVGSEEEEEEEEEEEDDDDDC
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DESeq2's median of ratios [POPLAR]
Coexpressed genes
Potri.001G422800 coexpression network
*The number of genes in the network is adjusted within 50 genes.*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.