Plant FIBer expression Database

Potri.001G423600 [POPLAR]


External link
JGI Phytozome v13PopgenieAspWood                  
Symbol
Arabidopsis homologues
Locus ID BLAST score/e-value TF class Alias TAIR10 short description
AT4G27010 1769 / 0 EMB2788 EMBRYO DEFECTIVE 2788, unknown protein
AT1G72270 1109 / 0 unknown protein
Paralogs
Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description
Flax homologues
Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description
Lus10012535
[exp]
2016 / 0 AT4G27010 1343 / 0.0 EMBRYO DEFECTIVE 2788, unknown protein
Lus10041555
[exp]
1471 / 0 AT4G27010 1025 / 0.0 EMBRYO DEFECTIVE 2788, unknown protein
Lus10041554
[exp]
785 / 0 AT4G27010 491 / 6e-152 EMBRYO DEFECTIVE 2788, unknown protein
PFAM info
Clan ID Clan name Pfam ID Pfam name Pfam description
PF11707 Npa1 Ribosome 60S biogenesis N-terminal
PF16201 NopRA1 Nucleolar pre-ribosomal-associated protein 1
Representative CDS sequence
>Potri.001G423600.1 pacid=42792035 polypeptide=Potri.001G423600.1.p locus=Potri.001G423600 ID=Potri.001G423600.1.v4.1 annot-version=v4.1
ATGGACGACCCAAGCTCCGCCTCTGAAGACAACGTTGTAATGGGAGATGAAAACGATAGCGAAGTCGAGGTAGAGGAAAGCGCAGTGCCAAAGTTTGAAA
TCAAAGCAAACTTCCAAGCGAAACTTAGTGAATTACTACACAGAATAAATTCAAATGAGATTAAGTTATGTAAAGACGGAACAAAAGAGTTCATCAAGTT
ACTAAAAAGTGAGTCTGGGGGAGAATTGCTTCGTGTTTATGTACAAATTTCATCGAGTTTTACGGAACTTTTAAGTGCTTGGAAGCTTAGGGCAGGGAAA
AATGGAATTTCATATGTAATGTCATTGATTTCGGTGATTTTTAGTCATTCTGAGGGGAAATATAGCGCTAATGATAGAGAGAGGATATTTGTTAGTAGGG
CTCTTGATAAGTTTGCTAGGTTGATTGTCCAAGAAAAAATGGATGGTCTTTATAAGGAGTTGAATAGTAAAGACGGGAAGCGTGAAAAGGCAGTGCTTTT
GTTAATGGCGTCTATTGTTAGGAGAGGGTCGGGTTTGGCTTCGGAGGTCGCGAAGACTTTTGATTTTAAGCTTCAGGGGTTTTTGAAACTGGCGGAGTAT
AAGAAGAGGCAACAAAATGATAAGAGAAAGAAGAAGTCCACTAGAAAGGCATTTGTTGGGTTTGCGATGTCATTTTTGGAGGTGGGGAAGCCGGGGTTGT
TGAGATGGGTGCTGCAGCAAAAGGAGATGTATTCAGGCGTTCTACGTGGACTTGGGAGTGATGACGATGAGACTTTAATTTATGTTTTGTCCACATTGAG
GGATAGAGTGCTTATCGAGCAGTCATTGGTGCCTCCTGGTCTTAGGAGTGTTCTCTTTGGGAATGTTACTTTGGAACAGTTAGTCGGGATTTCTGGTAAG
GAGAATGGTGGAGATGCTGCTGAGTTGGCACACAATGTGTTGGTTATGGTTTGTACTGATCCTAGCAATGGATTGATGCCGGATTTGAATAGACATCCAA
GTCCATTAAAGGGTAATCCGAAGAGACTCTTGGGGCTCATGAAGAAGCTAAAGGCAGTTAATATTGACTATCACAGAGACTTGCTCTTAGCTATTGTTAA
GGGAAGGCCGTCGTTTGGCTCAGCATACTTGGAGGAGTTCCCTTACAACCTTGAAGATTATGCATCGCCTTCTTGGTTTTCTACTGTTTCTCTGGCAGCA
AAATTAGTTTCGTCAGTGGGAGTCGGCCTTCATTTTGGTTTTCTTGATTCTCAATCCAATGATCCACCTTCCTTCGATAGCATGGATGTGAAGAGTATCA
TTAATTGCATATCTCCTCCTCCATTCAGCAGATCAGTGATCAATAAGGGGTTACTTCACTCAGATTTTCTAGTAAAGAATGGAACTTTAAGACTTCTTAT
GGAGGGACTAAAACTGTTGAATTCCTTCTTCAGATCTATAAACCTTTCCTGTTCCAGGAAACAAAAAAATTTGCATAGCTGGGCATCTCTCAAGCAGGAA
ATCCAGAATGAAATTCGAACTTTGCTTCCTGATCCCCAAGTTTTATTGACCTTGCTTTCTTCTTTTGGTAGCCATGCTAGAACTGATGAGAAATGTTTGA
AAAGAAAAGCAGATGAAGAAAATTTTGCTGAACAAGGAGGCAAAAGAATAAAGAAACTGAAAACAGATGCTGTAGATGAGGAGATGGACATTATTGTAGC
TGGAATAAGTTCAGTTCCCGATATCCCTTTGCCTGGGGAGGGTGAATCTGTTGCTGAGGCAGAGGCACCAGAGGAGCCAGACAGCGGAAAGGATTTTATA
AATGTTATATTACAGCTGTGGGGTTCTGACCTGTGCTCTGAGCCTGTTATTACACTGAAGGATGCAGAGATATTCTTCCACTCTAAGCTGCTTGATGCTC
TGAAAATTTATCTTCTGACAATGCCCACTGCTTTGGAGGGATCATTTGAATTTTTTATGAATCTTCTCAGCAATCCTTTAGCATTACCCAATAATCTGCA
GGGCTCTTTATTGTCTCTTCTAGTTGAGTACATTAAACGGTCTCCAACGAGTGGAATTGCTATTAGAACACCATCCTTGATGTACAAGCAACTGCAGACC
TTTATTAACTTACTGATCTTTTCACCCATTGATGACATAAAGGTTCAAGCATATAACCTGGCACGGGCAGCTATGTCAAGTACTGGTGCATTTGACAGAA
ACTTAAAAGAAATTGATGCATGGTTTTTCTTCTTACCTGGTTACACTGCAGTCAGATCATCTTTTGAGGTCCAAGGAATCGAAGTGCTGCAGAGTTTATC
ATCAGCTGTCATTTCATTCTTATGTGATGCCATCTCTACCATTGGGAATAACTTATTCAAATACTGGGATGCTCTCAGGAATTATAATCACTCCTTGAAA
GAGTTCAAAGATGCATCCCTGGATTTTAGCCCTTTCATCATATGTATCTTGCAGAAGTGTGTAAGGTTACTTGGTTCTGAATCAGGAACCTTTTCATTGC
CTGAGAAATCAATAATTTCAGTATATGTGTGCAGCACATTGAAGTATCTTTTGCAAACTCAGGTAGATGCGGGCTTATTATCTGCTTTGATTAGGTCAGT
TTTGTCCGAGGGGCTTACGGATCACTGTCCTTCAATTGATGATTCTGAGACTTTGTTCTGTGAGTGGAGACCATTGAGGAACTTGTTGCTCTTTGCGGAG
AGTGTATTGAATAAACAAGCTTGCTGCCAATTTTTCAATGACCAAGAAGCTATGCCCACTGTTGGTTCTTTTACAAACACACTTGATGAAGTAAGGAATA
TTGTAGAGAGTGGGCATGGTGGTGAAATAGCTGGAATATCAAAAGCTCTTTCTTCTTCAATTATATGTACAACATCCAATGAGCTATTAAAGAACTTTCC
GTCAGTTTTGATAACTTTTCAACGCCTTCGAGTTCCCGAGTCATTTTTATCATCAATAATCTTTCTTGAGCACAGTTTTCTTGCTGGTGTTCTGAAGCTG
TGGCCTGAAATGTTCTTTTCTGGTTTAGAAATGGTAATCTCTATGATTAATTCTCAAGGCACAATTGGTGATGCCTCTGCTAAAGAAACAGCACAGCATG
TGGATTTTGATGTCAGTGAATCTGCAGCAGCTGTTTCATTCAGCCTCTTTCTTAGGCAGGTGCCTTTTCATCTGCTATTTCCCGCAATCATGAGCATCAA
TGCTCCTTCTTTAGTGGAATCCTTGAATATAAAAGACTTGCTTTTGGCAAGACTATCTGAGTCATCAACTGATTCTGTTATTTCTCATTTGCGCCTTATT
CTATTTTGGTTTCATCAAATATGGTCATCTTATAGAATTAAACCATTGACTGAGCTTGAACGACTTGCTGAAATTTGCTATGTTCTTGTTAAGCACATCC
TTGCTCAACCACTGGCTTCAAAGCTCAATTCTCCCATGAATGCAGGGGTTCCTTTATCAGCAGATAACATTGGAGAAGTGGCTGAAACCATTTTCTGTCA
TCCTGCAGTGGTAGCATCTTTGGTTCATCCTTTGCATTGTCATGGTGATTTCACCGAGGGAAAGTTAGGGGAAAGTTTGGAGGAAATCCTTTGTTTCTCT
GGACAGACGGTTCACAAAATAGATCATCATGTCTTGGATATGTTGACAGCAACTTTTGATGATTTGTTTCTTCTGTCTGGTGGGCAACATCGTTCTACAC
TTGAATTTGATGATTGTGCTAGTAAACTAATTGTGAAGGCTTTCAACACCCTGTTACAGAGGCTATATCTGGAAGTTAGGGACAAGTTTGATCAGTGCAC
TAGTACAGAAGATCCACTGCCCCTTCTCCCATTATTTTATGCTTTGCATGCTTTGAATCGGTTTATATCCCCATTTGAGCTTCTCAAATTGGTCCATTGG
ATGTTTGGTAGGGTTGATGCGAGTGGTTTAAATGTTCAGAAACATTTTGGGTTATCAGCTCTTTCTGTGGGTCTTTGCATCGCTGCTGATGCCTTTGACA
TTTTGTCTGCTTATTTGCAGCAGCCAATGACAAGGAATGTGCCATTTTATATGCTTTGGAAATCAGAAGAGAAATTTTTTGATGTTAACCTGATTGAGGA
GATCTATGTTCAAGTATGCAAGTTTGCCACTGATTTTAACCAGGATTTTGCGCATGTTTGTTTGCTGAAAGCTGTGAATGCTGTCTACAGCCAAAAATAC
ATGCAACATGGCATCCTTCATCCATTAAGCTTGGTATTGCCTAGGATTATAAGGAGCACTCCTCTAGAAATACTTTCTCAATGCATTTACCGAACAAACA
TGACAAAAACTAAATTATTGTCTCTTCTTGTTGAGATGAGCCCCTTGCATTTGTCAGTCTTCGGACACTTATTTTTTGGGATTTTGGATGAAGATTTTAA
TCTGAAGATAAAGACAGTGGAAAAGACTCGTGATTCAGCTCTTTCAAATACAGATTTTGTTATGCTTCTACCCGCTGCTTTGTCATACTTGAATTCAATT
CTCATGAAATTTGAAAAGCAGCAATACAAGCAGTTTACAAATATACCTTCGTTCTACTCAAAATTGCTATTAAAGGGTTTCCTTCATTGGAAGAGTTTTG
TATCTGGATATGTATTTCAGGAAAGTTATAATGATTTCTTGCCATCATCCATTGAAGAACTTCTCAATCTCGTGGATAGTAGTCTTCTTGGAAAGGCAAT
CTGTATGTTACGACAGTACTTCTCCATAAGTGTAGATATGAAATTGAAGGAGCGATTGAAACTTTTTAATTCCATTCTATCCTGTTCCGATACACATGTT
GAACTGCTAGATTGTGAAGTTGGTGAAATGGAATTTTGTTCTCATAACCAGTCATTAAACCTTGTTAATAGAGTTGTTGCAAAAATATCATTTTGTCGAA
TGTTGTTATTTCCAAAGGATAATCAGATTGTGTCTCTGCCAAAAGAAGCAGTTGAGAACTTGCAGGAGGTTTCTTTAGAAAAGGTGTCTAACAAGGAGGG
CCAATCAAGGATGAGGTTGTTAAAGATTTTGGTAGATACTTGGCAATTCATGGTTAAGAAATTCCCTTCAGTTTCAAATGGTTCAACGAAAGAAAAGATC
TCCAATTGTTTGCAGTTATACAGATACCTGGAGCTGTTCATTTTCAGAACCATTTTTGAATTAGCCATGGAGATGCGTGAGGATCTTATCCTTTTGGAGT
CTGTTCCCTTCCTTGAACAGTTGACGAGGTCTTCTCTTCTCTATCGTTTTGAGGATCCAACAACAATGAAAATTCTTCGTGGTATTTTAGTTTTGCTGTC
AGAAGGAAAATTTTCATGTGCTCTATATCTTCAACTGCTTGTTTCTCACTCTCAATTTTCTTCTACTATTCAATCTATCACTGAATCATTTGGATGTCAG
ACCGGTGCTTTTGTCAAGCCCATGTCTAGCATTCTGAGATCACCTGTTATCCTTCGTACAAAAAGCAGTGATGATTTGCAAACAACTGAGCTGCACATGA
AGCAGCTGGAAATTGTTAAGTTACTCAGAACACTCCTTCAACTAAAGCCTCGTCAGAGCAGTTTTGATTCTGGAAACGATATTGGCATAAATCTTAAAGA
ATTGCATTTGTTGCTTCTATCTTCTTATGGTGCAACCCTAAGTGAAACTGACTTTGAGATATACAATTTGATGCTTGAGATTGAGTCAATTGATAATTCT
GTCGTTGATGTTGTTGCTGATATGGATTATCTGTGGGGAACTGCTGTTTTAAAGATAAGCAAAGAACGGGTGCTAGATCAGGAAACATATGATGTCGTGA
CTAATACAGAAGCAGTAAAAGAACATCGAAGAAGTCAATTTAGGGAAAATCTTCCTGTTGATCCCAAGATGTGTGTGACAACGGCGCTACATTTTCCCTA
CGACAGAACTGTAACTGATGGATCTTTTTCCTTGGATAGGCTTCAACTAGATAATCTAAAGGATATATATGAGAGACATGTTCCTGGTGTTGAAAACATA
CAGCTATATGATCCTGTTTTCATATTGCGCTTTTCAATTCATGCTCTGTCAATGGGTTACATTGAAGCCGTGGAGTTTGCTGGTTTGGGGTTGCTTGCTG
TTGCATTTGTTAGCATGTCTTCACCTGATGTTGGGATGAGAAAACTGGGTTATGAATTAATTGGGAAATATAAGAATGTGCTAGAGAACTGTCAAAAGAC
AAAAGATGTAATGCGACTCCGACTCCTGTTGACATACTTGCAAAATGGAATATCTGAACCATGGCAGAGAATTCCTTCTGTTCTAGCACTTTTTGCTGCA
GAGTCATCTTTGATATTGTTGGATCCTTCACATGATCATTACACAACCTTAAGCAAGCATTTGATGCATTCCTCCAAGGTGAACATGAAGAGCATACCAT
TATTTCATGTCTTTTTCCTGAGTAATGCAGTCAATTTCAGAATGGAGAGGCTCTGGATGCTTCGCCTAGCATGTGGAGGGCTGAATTTAGATGACGATAC
TCAAATATTTATTAGGAATTCCACTATTGAGACCCTATTGAGTTTTTATTCTTCTCCTCTTTCAGATAATGAGTCAAAAGAAATAATTCTTGAGATAGTG
AAGAAGGCGGCTAAATTGCCCAGGATGGTTCGTTACCTAGTGGAACACTGTGGTCTGTTTCCGTGGTTATCATCTGTTCTCTCAGTCTACAAAGGGATGC
TGCATGAAAATGAAAGAATTTTTTTCTCACAGCTGTTGGTTGTGGTCATAGAGGTCGTCAATGATGTTGTTTCATCCAGAAACATTGTTGAGTGGTTGCA
AAACTATGCTCTTGAGCAGCTAATGGAACTTGCAACTTATCTTTACAAGCTCCTAGTTGCTGGCTCAAAGTTGATAAAGGAGAATGTCACATTGGTTAAT
TCGGTTCTGCATATAATGCTGACAACATTGAAAATATCCCAAAAAAGGAAAATATACCAGCCACATTTTACCCTAACATTCGAGGGCTTATTCCAAATTT
ATCAGGCTTTGGATGTATTCAATACTTCAAGACCTAGTGCAAGTTCAGAGCTTGGGCTTAAAACAATACTTATGGGTTTTCCTCGGGTTGACATATTGCA
CATGAATCAAGAGAAGCTTTCAAGTTTCCTTCTGTGGGCAGTCTCTACTGCCATGAAGTCTGATTCCAGCCAAATCATCAATGTTAAAGATACTCGTGCG
AATCTCACAATCAACTCGGAGGAAACACCATCTGAGGAGTCTTTGGTATCAAAACTTTTGCGTTGGCTTGTTGCTTCTGTAATTCTGGGAAAGCTTTCAA
GGAAACTTGATGTAAATGCTGAACTTTCTGAAAAATCAAGTTTTAAAACATTGCAAAACTTATTAGAAAATGTTGAAAAAGGGTGTGGAGAAAGCAACAG
ATTGGGATTTGATTGTGAAGAGGTATTAGCTTTGTCAATATTTTACCTCCAGCAGCTTCTTGGCATGAATTTCACAGTGCTTCCTTCAGTTGTGTCTTCA
CTATCTCTTCTACTTCTTCGCAAGAAATCGAAGTTTTCAGATTTCGCACTTGGTTACAGGACTTCTACACTGTCACTATGGTCGAAAATTCGTTGTCCAG
CTGAAGCTAATCCTGCTTGGAGATGGTCATTCTACCAACCGTGGAAGGATCCTTCATGTGAACTGAGTGAATCACAGAGAATGTATGAACAGCACGCCTG
TCAATCTCTTCTAGTGATCATCACAAATGTTCTTGGAAAGAAATCATCAGATGATACACGGGTTTTATCACTTGAAGATGTAGAAAATTCTGGTCTTTTC
AAATGGGAAAGGACTATAGCAGAAATTGAATTATAA
AA sequence
>Potri.001G423600.1 pacid=42792035 polypeptide=Potri.001G423600.1.p locus=Potri.001G423600 ID=Potri.001G423600.1.v4.1 annot-version=v4.1
MDDPSSASEDNVVMGDENDSEVEVEESAVPKFEIKANFQAKLSELLHRINSNEIKLCKDGTKEFIKLLKSESGGELLRVYVQISSSFTELLSAWKLRAGK
NGISYVMSLISVIFSHSEGKYSANDRERIFVSRALDKFARLIVQEKMDGLYKELNSKDGKREKAVLLLMASIVRRGSGLASEVAKTFDFKLQGFLKLAEY
KKRQQNDKRKKKSTRKAFVGFAMSFLEVGKPGLLRWVLQQKEMYSGVLRGLGSDDDETLIYVLSTLRDRVLIEQSLVPPGLRSVLFGNVTLEQLVGISGK
ENGGDAAELAHNVLVMVCTDPSNGLMPDLNRHPSPLKGNPKRLLGLMKKLKAVNIDYHRDLLLAIVKGRPSFGSAYLEEFPYNLEDYASPSWFSTVSLAA
KLVSSVGVGLHFGFLDSQSNDPPSFDSMDVKSIINCISPPPFSRSVINKGLLHSDFLVKNGTLRLLMEGLKLLNSFFRSINLSCSRKQKNLHSWASLKQE
IQNEIRTLLPDPQVLLTLLSSFGSHARTDEKCLKRKADEENFAEQGGKRIKKLKTDAVDEEMDIIVAGISSVPDIPLPGEGESVAEAEAPEEPDSGKDFI
NVILQLWGSDLCSEPVITLKDAEIFFHSKLLDALKIYLLTMPTALEGSFEFFMNLLSNPLALPNNLQGSLLSLLVEYIKRSPTSGIAIRTPSLMYKQLQT
FINLLIFSPIDDIKVQAYNLARAAMSSTGAFDRNLKEIDAWFFFLPGYTAVRSSFEVQGIEVLQSLSSAVISFLCDAISTIGNNLFKYWDALRNYNHSLK
EFKDASLDFSPFIICILQKCVRLLGSESGTFSLPEKSIISVYVCSTLKYLLQTQVDAGLLSALIRSVLSEGLTDHCPSIDDSETLFCEWRPLRNLLLFAE
SVLNKQACCQFFNDQEAMPTVGSFTNTLDEVRNIVESGHGGEIAGISKALSSSIICTTSNELLKNFPSVLITFQRLRVPESFLSSIIFLEHSFLAGVLKL
WPEMFFSGLEMVISMINSQGTIGDASAKETAQHVDFDVSESAAAVSFSLFLRQVPFHLLFPAIMSINAPSLVESLNIKDLLLARLSESSTDSVISHLRLI
LFWFHQIWSSYRIKPLTELERLAEICYVLVKHILAQPLASKLNSPMNAGVPLSADNIGEVAETIFCHPAVVASLVHPLHCHGDFTEGKLGESLEEILCFS
GQTVHKIDHHVLDMLTATFDDLFLLSGGQHRSTLEFDDCASKLIVKAFNTLLQRLYLEVRDKFDQCTSTEDPLPLLPLFYALHALNRFISPFELLKLVHW
MFGRVDASGLNVQKHFGLSALSVGLCIAADAFDILSAYLQQPMTRNVPFYMLWKSEEKFFDVNLIEEIYVQVCKFATDFNQDFAHVCLLKAVNAVYSQKY
MQHGILHPLSLVLPRIIRSTPLEILSQCIYRTNMTKTKLLSLLVEMSPLHLSVFGHLFFGILDEDFNLKIKTVEKTRDSALSNTDFVMLLPAALSYLNSI
LMKFEKQQYKQFTNIPSFYSKLLLKGFLHWKSFVSGYVFQESYNDFLPSSIEELLNLVDSSLLGKAICMLRQYFSISVDMKLKERLKLFNSILSCSDTHV
ELLDCEVGEMEFCSHNQSLNLVNRVVAKISFCRMLLFPKDNQIVSLPKEAVENLQEVSLEKVSNKEGQSRMRLLKILVDTWQFMVKKFPSVSNGSTKEKI
SNCLQLYRYLELFIFRTIFELAMEMREDLILLESVPFLEQLTRSSLLYRFEDPTTMKILRGILVLLSEGKFSCALYLQLLVSHSQFSSTIQSITESFGCQ
TGAFVKPMSSILRSPVILRTKSSDDLQTTELHMKQLEIVKLLRTLLQLKPRQSSFDSGNDIGINLKELHLLLLSSYGATLSETDFEIYNLMLEIESIDNS
VVDVVADMDYLWGTAVLKISKERVLDQETYDVVTNTEAVKEHRRSQFRENLPVDPKMCVTTALHFPYDRTVTDGSFSLDRLQLDNLKDIYERHVPGVENI
QLYDPVFILRFSIHALSMGYIEAVEFAGLGLLAVAFVSMSSPDVGMRKLGYELIGKYKNVLENCQKTKDVMRLRLLLTYLQNGISEPWQRIPSVLALFAA
ESSLILLDPSHDHYTTLSKHLMHSSKVNMKSIPLFHVFFLSNAVNFRMERLWMLRLACGGLNLDDDTQIFIRNSTIETLLSFYSSPLSDNESKEIILEIV
KKAAKLPRMVRYLVEHCGLFPWLSSVLSVYKGMLHENERIFFSQLLVVVIEVVNDVVSSRNIVEWLQNYALEQLMELATYLYKLLVAGSKLIKENVTLVN
SVLHIMLTTLKISQKRKIYQPHFTLTFEGLFQIYQALDVFNTSRPSASSELGLKTILMGFPRVDILHMNQEKLSSFLLWAVSTAMKSDSSQIINVKDTRA
NLTINSEETPSEESLVSKLLRWLVASVILGKLSRKLDVNAELSEKSSFKTLQNLLENVEKGCGESNRLGFDCEEVLALSIFYLQQLLGMNFTVLPSVVSS
LSLLLLRKKSKFSDFALGYRTSTLSLWSKIRCPAEANPAWRWSFYQPWKDPSCELSESQRMYEQHACQSLLVIITNVLGKKSSDDTRVLSLEDVENSGLF
KWERTIAEIEL

DESeq2's median of ratios [POPLAR]

Mapped by: Order by: Show schematic diagram

Coexpressed genes

Only top 10 genes are shown Show allDownload tab-delimited text
Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.
At best At TF class At alias At description Locus MR r Symbol NWA:WTNWB:WTNWA:OE-ARK2NWB:OE-ARK2NWA:miRNA-ARK2NWB:miRNA-ARK2NW 0hrWT H20WT-NWTUA1dEY NWTUA1dEY+TUB15 NWTUA1dY+TUB9 NWPde NWNWA:WT GANWBWT GATW:WTTW:WT GANWA:OE-ARK2 GANWB:OE-ARK2 GATW:OE-ARK2TW:OE-ARK2 GANWA:miRNA-ARK2 GANWB:miRNA-ARK2 GATW:miRNA-ARK2TW:miRNA-ARK2 GATW 2hrTW 8hrTW 24hrTW 48hrTW 96hrTW 336hrWT ACC35S::etr1-1 H2035S::etr1-1 ACCLMX5::etr1-1 H20LMX5::etr1-1 ACCWT-TWTUA1dEY TWTUA1dEY+TUB15 TWTUA1dY+TUB9 TWPde TWOW:WTOW:WT GAOW:OE-ARK2OW:OE-ARK2 GAOW:miRNA-ARK2OW:miRNA-ARK2 GAOW 2hrOW 8hrOW 24hrOW 48hrOW 96hrOW 336hrRoot CTRRoot LongColdRoot LongDrougtRoot LongHeatRoot LongSaltRoot ShortColdRoot ShortDrougtRoot ShortHeatRoot ShortSaltPtr rootLeaf CTRLeaf LongColdLeaf LongDrougtLeaf LongHeatLeaf LongSaltLeaf ShortColdLeaf ShortDrougtLeaf ShortHeatLeaf ShortSaltPtr leafStem CTRStem LongColdStem LongDrougtStem LongHeatStem LongSaltStem ShortColdStem ShortDrougtStem ShortHeatStem ShortSaltPtr shootPtr xylemPtr phloemPtr fiberPtr vesselPtr fiber vessel ray
AT4G27010 EMB2788 EMBRYO DEFECTIVE 2788, unknown... Potri.001G423600
[exp]
0 1
AT3G06530 ARM repeat superfamily protein... Potri.003G151500
[exp]
1.41 0.9122
AT5G40480 EMB3012 embryo defective 3012 (.1) Potri.001G345100
[exp]
2.00 0.8652
AT3G11964 RNA binding;RNA binding (.1) Potri.016G062600
[exp]
3.16 0.8924
AT1G72440 SWA2, EDA25 SLOW WALKER2, embryo sac devel... Potri.001G164100
[exp]
3.46 0.8529
AT2G28450 C3HZnF zinc finger (CCCH-type) family... Potri.009G013000
[exp]
4.24 0.8403
AT3G16010 Pentatricopeptide repeat (PPR-... Potri.001G180000
[exp]
6.92 0.8451
AT1G67120 ATPases;nucleotide binding;ATP... Potri.017G039100
[exp]
7.14 0.8697
AT1G10490 Domain of unknown function (DU... Potri.007G079300
[exp]
8.36 0.8455
AT3G09720 P-loop containing nucleoside t... Potri.019G065300
[exp]
10.67 0.8080
AT5G35910 Polynucleotidyl transferase, r... Potri.019G038701
[exp]
11.00 0.8308

Potri.001G423600 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.