Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G24740 3006 / 0 Protein of unknown function (DUF1162) (.1), Protein of unknown function (DUF1162) (.2) AT4G17140 124 / 1e-27 pleckstrin homology (PH) domain-containing protein (.1), pleckstrin homology (PH) domain-containing protein (.2), pleckstrin homology (PH) domain-containing protein (.3) AT1G48090 102 / 6e-21 calcium-dependent lipid-binding family protein (.1) AT3G50380 57 / 5e-07 Protein of unknown function (DUF1162) (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.001G148800 [exp] 136 / 4e-31 AT4G17140 3708 / 0.0 pleckstrin homology (PH) domain-containing protein (.1), pleckstrin homology (PH) domain-containing protein (.2), pleckstrin homology (PH) domain-containing protein (.3) Potri.008G100600 [exp] 111 / 1e-23 AT1G48090 3782 / 0.0 calcium-dependent lipid-binding family protein (.1)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10003835 [exp] 2381 / 0 AT5G24740 1701 / 0.0 Protein of unknown function (DUF1162) (.1), Protein of unknown function (DUF1162) (.2) Lus10003834 [exp] 1029 / 0 AT5G24740 858 / 0.0 Protein of unknown function (DUF1162) (.1), Protein of unknown function (DUF1162) (.2) Lus10011036 [exp] 125 / 9e-28 AT4G17140 3546 / 0.0 pleckstrin homology (PH) domain-containing protein (.1), pleckstrin homology (PH) domain-containing protein (.2), pleckstrin homology (PH) domain-containing protein (.3) Lus10003007 [exp] 123 / 3e-27 AT4G17140 3544 / 0.0 pleckstrin homology (PH) domain-containing protein (.1), pleckstrin homology (PH) domain-containing protein (.2), pleckstrin homology (PH) domain-containing protein (.3) Lus10037833 [exp] 93 / 4e-18 AT1G48090 2202 / 0.0 calcium-dependent lipid-binding family protein (.1) Lus10017108 [exp] 67 / 4e-12 AT1G48090 206 / 2e-62 calcium-dependent lipid-binding family protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF06650 [poplar] [flax] SHR-BD SHR-binding domain of vacuolar-sorting associated protein 13 PF16909 [poplar] [flax] VPS13_C Vacuolar-sorting-associated 13 protein C-terminal
Representative CDS sequence Show only first row Show all	>Potri.001G455600.4 pacid=42790849 polypeptide=Potri.001G455600.4.p locus=Potri.001G455600 ID=Potri.001G455600.4.v4.1 annot-version=v4.1 ATGTTTGAAGGACTGGTCCATCGCGTTCTGGTCGGTTATCTAGGCCGTTACTTTAAAAATATCCAAAAAGAACAGCTCAAGCTCAGCCTCTGGAACGAGG AGGTGTTATTGGAGAATGTGGATTTGATTCCGGAAGCTTTCGATTATCTCCGGTTACCCTTTTCGATTAAGCAAGGTCGGGTTGGGAGGTTAAGCATTAA GCTTTCGTGGAAAAAGATTGGGTGGGATCACCCCATTATTATTGCTGTAGAAGACGTTTTCATTTGCTTGTCCCAACGGGAAGATCAGGAGTGGAATTTG GACGCAGTTGAAAGACGGGAATTTGCTGCTAAAAAAGCTCAACTTGCTGCCGCAGAGCTTTCAAAATTGTCAAAGCGCATATGTGATAATCAGGCGGGGA AATCATTTATCTCATATATTACTGCAAAGGTTCTTGATAGCATCCAACTTTCAATTAGAAATTTTCATGTCCAATACAGTGAAAGGCAGTTTGACTCGGC ACAGGTTTTGTTCGGGTTGCAGTTTTCCAACTTGACGGTAAAGCAAAATCTGGTTGGATCATTTGGTGCGAAGATGGTAGGTGGCCAAGTAAACAAAACT GCGAGTATTGAAGGCTTGGAAATTTATTGTACCACATCGAAAGGAGATATTGATTCAATGGGTTTGGATGATGCTGTGGACTCCAAATCCTGGTGCAGTG CAAGAAATGGAGGCAATGAGTTTGACTACTTATTACAGCCACTCAATGTATCAGTGTCACTTGGGGTTAACAGAGCAGGAAAGCTTGACAGTGATTTGCC CCAGTATTCAATCAGGGCCGACCTAAATGAATTGGCTGTGTCTTTAAATGAGATTCAGTTGCAGCGAATATTGATTTTATCAGATTACTTAAGCACGAGC AGTTTACGGGAGAAGTATGGACGTTACCGTCCTTGGGGTTGTCCTCTATCGAGAAAACAGGATGGATGGCAAAGATTATGGTGGCACTATGCTCAAGAAT CCATTCTGGCAGATGTTCGCTTGAAGTTGAAGAAAACTTCATGGAGATATTTAGGACAGAGACTGAGTTTTCGCCGAAAGTATATTAATTTATACCAGAC TAAACTAGAGTTTCTCCATCGAGAACAGGCAATCGATGAATATATTATTCAGGACTTGGAGCAAATGGAGAAAGAATCTGATATAGATGATATCCTAAGT TATAGGTCTGTGGCTGAACTTAAGCTCCAGGAAGTTTTATCGAACTCTTTATCTTCAAATATGGAAGTTAACGGTGCCCATAGTTTCATTGAGAAGTCAC AAAATGATGAACGCTCATCAAGCGGGTCCCGTGGATGGTTGAATTGGATCTCCCGAGGCATGCTTGGTGCTGGTGGAACCGATGATTCAACTCAGTTCTC TGGTGTTGTTTCTGATGAAGTCGTAAAGGATATATATGAAGCAACGGAGTTCCAGCCATCTGTTTTATCTAGTGGTGATGTTGATGCAAATTATAAGATG TTTACATGTGCAATGAAGTTTACTGTAGGTTGCATTACTGCAACACTGCAGAGCAAGAGTTACTCTAAAAAAATTGCTGACCTGATTTTTAATGAGTTAG TCATTGAATGCAAGCTTTGGGAAGAGTTGGCAACGGTTGTTTGCCACTTTAGATCAGGAGAGATGTTTGATCCATGTAACAAGAGAGTCATTCTACAGAT AGGAAGGTCCCTTACGGATGGTAACGTGCGGGAAGATGAACCTCCTTCATGTAGATTTCAAGTGGACATTTCACCAAAGCGGGATATTGAATTGTCAGTA AAGGTCATGCTTCAACTGCTGGAAGTTTCTTGTGATCTAGAGTTGTTTCTAAGTCTCTGGGAACTCTTTACTGTGTTCAAATCCTTTGAATTTCAACTGG AAAGGGTTCTGTTGTCACTAAATGGGATTGAAGATGTCAGGACTCGCTTATTGTCAAAAGTGGAATACATCTTATCAAGTCATAAAAAGCTAAGTTGGGA TGTTAATGTCATCAATATTATAATTAATGTTCCTTGGAGAAAAGCAACGCAGGAAGAACATAAATTGGTTCTGAAATTGAAATCCTTTTCTTATACTTCT AAATTTGATGCGGATTCTGTTGCTTCTATTATTGAAGAACAATCTTCTATCCCAAAACGGTTCTCAAGCTCAATTTCAGCTTCTAATATTTTTACGGGGT TCCAAATTCAAGATCTCTATAATTACTTTGAGGTCAAATTAAATGACATTGAGTTAATTCTCATTACCCCTCAACATGCTCAAGCAATCTCTATCTTGGA GAAATTTTGTGCTTCTGTTGCCCTGGCATCCTGCATCATTTCTGATCAATCAGTATTGAAACAATTGGAGGTTTATGTCAATTTATCAGCACTTAATGCA AGCTTTTCCCCACCAATATATGAGTCAGTCGTGGCATTTATTGCACATATGGAAAATCTTTGTTCAAGGTCTGAACCTCTGATGCTAAAAAACCCCAATT CACCTGTTGTCATCACAAATCGACCTGGGGCTTCTGATTTTGGTTTCGGTTTCTCTGTTTCTGCAAGATTGGACTTGGTCAGTTTTTGTTTTGACCTCGC AAATGATGGAGAGAACAGCTCTGAACTCGTGTTCTCTCTTCAAGGATTAGATATCTGGTTATCTCATACCCAATTTGACGAGTTCTGGGTTTGTACAAAA GCATTAAAGATCACCACTTCCCCGTTGAGAGGTGAAAATGATGGCCATATTCTGTGTTTATCTGGGAAGCAACTTTCTTCCAATTCTGCAAATCATGAAG ACTTGGGCATCCGACATGGCAATCAGGATGGAAATTTAGAACGTTCACTCACTGAAGTATGCTTTCTTTTGCACTATGAAGCTTACAGAAGGGCAGATAC AGTTGTTAACAAGTGTACCGTTGGCTTGAATGATATTGATTTCCATTGCTATCCATACATAGTCGGGTTATTAGTTGGATTTTACAATAAATTATCTGCT TATGGTTCACCCTTCACTTCTGATGACTCATTTAGCCTTGTTACAGAGGCTAAAAGTCCTAGAAGAAGGGCTGGCTTAGAGTTTGAAAGATTTGGTTACT CAAATTTCATTGAAACTGGGTCTTCTGATCATGCTAGCATTTCTTTGGATAACTATCCCTTTGTTACTCTTTGCAATTCTGCTTCTCTTGGCAGCATAGA GAGTTCACTTCATTACCCTATTGCTGACTGGAGGAGATTATTTAATTTAAGGGAAAGAAAAATCAAAAGTACAAAATTCTGTTTAAAGAATGGATTGAAA ACTTTTGATGCTTCACCATTGACGTTCACATCTGTGGTGGATACATCTGCTGCACCAGGAATTATTAGTGATGCAAATTTACTTAATATTGACATAAATC TTTGTGGAGTCAGAGTGCATTTTCATGATTCCTCTTGCATCGTTGGAACTGTTGCACTACCAACCTTGAAATCTTCACTCTCAATTTATGAAGACTCTAT GGATCTGCTGTGTTCTGCTGAGGGATTGGTTCTCACATCGTCTTGGTGGACTAAAAATTTTCAAGAGTTTCTTTGGGGGCCCTCGTTACCAAATCTGTCT CCCATTCTAAATTTACGTGTGAGAAAAGGGAAATTTGGATCATTGCCTTCTGAACTTGAAGTCAGCATCGGTATTCAGCATGTATACTGCATGTTGCCTC CTGAGTTTTTAGCCATTATAATTGGTTACTTTTCATTGCCAGATTGGAGTTTAAATCTGAGTGAGCAGCCTATGAAAATGGAAAACAAGAGTCATGTAGT ATATAAATTTGAGATACTGGACTCCACTTTGATTCTGCCTGTGGAACATGATGACCATCAGTTTCTGAAGATAGAAATTCAACAACTGTTCTGTAGTTTT ATTGATAAGTGTGCTCCAAATGATGCAATGATGAATATTCCCCCTGACTATATGGTTCCAGCACACAAAGTTGCCAAAGCAAATCACTGTTTGAATATGT TTGGAAGGGACTTATCCCTATCGTTCCTGCTAAGCAGAGAGGATGAACATGGTTGCTTAGAGCTTGATCAAGATACCGGGTGTGGTAATATCACCTTAAT TGCAGCACTTAGTTTAGATCTTTGGGTTTGGCTACCTTGTGATGACGAGTCTTGTTTTGAAAGCTCTTCTGTTTCCACATGCATCATGTCAAGGATTACC GATTGTCAACTTATTGCTGATGACTGCTACAGTTTGGATGGATTTGAGGCGCTACTAGATGTCATAGATCAGTTTTCTTCAGTTGATGATCAGTCCAAAA ATTTTGGATCTGATGTTTTGCACTTTCTTCAGTGGAAGAGGAGCCAAAAGGAAAATTGTGAAGTTTCACCTGCTGCCTCAGGCACTGTCTCTTTGGAAGT TCAATGTTCTGTTGATTCCTTGTTGATAAAATTGTATCATTCTAGAGAAGGTTCAACTCTGCTGGAACCAATTGCCAAGATTGATGTGAAGTTTAAATGT TCAGCATCTCTGGTAAATGAGACACTTATGGTATTGGACTTTGGTTTTTCTTCTTTGGCACTATATTCACTGCCTAGTTCTGTGTTGTTAGCACAATGCA CTGGCAGTTCCTCTGCTTCATCAGCCCTTCATTTATGTTTCTTAAAATCTGTTGAAGGTGAAAATGAACTTAATATTTCTCTTCCTTCTGTTAGTATTTG GCTACATCTTTTTGACTGGACTGGGATCATTGATCTTTGTAATTCTTATGCTAAAAGAATTGCTGAAAATGAAGCGGTTCGAGCATCATCAATGAGTTCA TCCAAAGATCTGGTTGATCCGACTGAAACTGTGATATGTGCTGTTTCTCAAAATTCTCCTCAAAATATCAGCGTGCCCAGTTCTTATGTTCATAATTATG TGAGGCAGGACTCTGTTTCACTTATTGTGAGATCAGAAAATATTGGCCTTACGGTTCATTTTCCTGTCTGTGCCACAGAAACTTTACCTGGTGAAATACA GGCAGCTATAGTTCAAGAAAGGAGGCCCCAAGATGTTGCATCTAATACAACAGAACGGAAAAACAATAAATTTATTGCAATCACTACACATAGTAGAAGA ACTGAACTATCCATGGTTGGTAAAATTGTGACCTTGAAATGTAGTTTGCAGAAGGCCATGGGCACTGTTGGAATATGTGAGGATGAGAGCATTACCACAT GGCCTCTCTTTGAGACATCGCAAGTTGTTGTGTCAACTGAGATTTTTAATAGCCAGCTTGAGTCTGTCAATATTAATTTAGGGGTACAGTGTGACCGGTT AGATGTGCAGCTTTCCCATCAAGTACTCTGCTTCTGGCATGGTGTACAGTTAGACATTGCTGAAGCAGGAACTTCTCGTTCTTTGTTTGGTCATATGGAT TTCAAAATCCAGTTGCGGAAAATTTCCTTTCTTGTATCCGATGAAAGGTGGAGCTTTGGTGGTCCTCTGCTAGAAATTGCTATGAGGAACTTTCTGTTGC ATGCTATTGTGACTGAAAACAGCATGGAGAGCTCAGTTGCAAGTGACCTTGAAGTGAACTACAATAACATCCACAAGGTTTTGTGGGAGCCATTTGTCGA GCCTTGGAAGTTTCAGATAAACATGATTAGAAAACAGGAGATGACTGCTCACTTGAACAGTTCCATTTTGACAGATATCGATGTCACATCAACAATGCAA CTTAATTTGAACTGTACAGAATCTCTTATTGAGTGTTTTTTCAGGACACTTGAGATGGTTAACGATGCCTGGCATTTGGGACCAAATGATCCATTTGAAA ACCAGAGATCCTCAAGTAGCCAGTTATCTGAAAATGTACATGAAGGGAGTTATGCTCCCTATGTGCTTCAAAATTTGACTTCCTTGCCTCTTGGATACCA TGTTTTCAAAGGGCTGGTTAATGCAGATGAGTTTGATTTCTCTGAAATGAAAGACGCAAAATCTATCCAACCAGGTTCTTCTGTTCCTATTTATCTTAAT GAAACTCTGGAGGAGCAATTGTTTCGATGTGGCCCTGCTCAGTCTTCTGACAGGCTCAGTGAGAAGCAATCAAATGGAGCTGTTCATCACTTCATGAGCA TTCAGCTTGACGGGATGTTTCTACCTTCTCCTCCTATTTCAATGGATCTTGTAGGACTTACCTACTTTGAGGTTGATTTTACTAAGGTTTTGAAGCGGAC AGAAATGGAGAAAACGAGGAATGTTTCAAAATATGATATGGACCTTGAAGAGAATGCTAGATTCAATACTGATGGTGGTTTTGTTGTTCCTGTTGTCTTT GATGTTTCAGTGCAACGCTACACCAAGTTAATACGATTATACTCAACAGTTATACTTGCTAATGCAACATCAGTGCCACTGGAGTTGAGGTTTGACATTC CTTTTGGACTATCCCCGAAGCTACTTTTGTTTTTACAGGTCTTAGATCCAATTTATCCAGACCAGGAGTTTCCATTGCCTTTGCATTTGGCTGAAGCTGG TCGAATGCGCTGGCGTCCGCTTGGAAATTCGTACTTGTGGAGTGAAGTACATGACATTTCTAACATTCTTTCACACGAAAGCAAGATTGGATTTCTTAGA TCTTTTGTTTGTTATCCATCTCATCCAAGCAGTGATCCCTTTCGCTGTTGCATATCGGTTCACAGTTTTAGCTTGCCTTCATCTAAAAAGCTGAAGAAAG GATCATATAACACTTTGAGGCAATCATTTGAAAGTTTCGATGGTGATCAGAAGAAGTCTAGTAATCGTTTTATTCATCAAGTAACCTTAAGTGCTCCATT AGTAGTGATCAATTATCTTCCAGATGAAGTATCTTTGGCAATCGAGAGTGGTGGGGTTACTCGTACCGTGTTGCTCTCAGAGTTGGAAACTTCTTTCCAT CATATAGATCCTTCATACGACTTAGGAATGGAATTCTGTATTCATGGATTCAGACCTTCGACTTTGAAGTTTCCACGTGCAGAAACATTCTGTACAATGG CGAAGTTCAGTGGAACCAAGTTCTCTTTAACTGATACCGTTTCCTTTGATTCTGATTCATCTGATGGTCTGCTATGTGTTACAGTGGAAAAGATGATGGA TGCATTCTCTGGTGCACGAGAACTATTCATTTATGTCCCCTTTTTGTTATATAATTGCACTGGTTTTCCACTCAATATTTCAGAATGCAATTCAGAAATG AAAGGAAGTCATTGTACTATCCCATCTTGTTATGTTTTGGTTGAAGATGAATGCCTTCAAGGCAGGAAAGATGGTCTTAGCCATTTATCTTTTGACCAGG ATTCACATTTGAGAGCTCCTCATATTATCAGTTCAGGGAGTTCTTCTTCTAAAAATAACGTTCTTTTGTCCAGGAGGGATGCTACTTCGCATCTTGGGAG AGTTATTAGCAAACCTCTGATTTTATCTAGTTCCTCTGGACCTTTGCAAGAGCAATCAGACAAGCATGATTTAGTTTGTCAAAAGGCTTCTTTTGACAAG TGTTCAAGTACTGACTCAATTGATACTGGACGTGGAGAGGTTAAAGCATGCATGTATTCTCCCCATGGTGTTTCTTCTGCTAATGAAATTATGGTAAGAG TAAGTAGGCATGAATTTGTCATGGAAAATGCTTCCCATTCCACATGGTCAAGACCGTTTCTTCTCATTCCACCAAGTGGTTCAAGCACTGTTTTTGTTCC ACAATCATCATCAAATTCTGCACTGATAATATCCGTGACTTCTAGTGATGTTGCTGGATCATTCGCTGGGCGAACCCAAGCTATTGCTTTCCAGCCCAGA TATATCATTAGCAATGTCTGCAGCAAAAAAATATGTTATAAGCAGAAAGGAACTGATTATTCAGTTCGTTTAGGAATTGGACAGCATCACCATCTTCACT GGAAAGACACAACGAGGGAGTTATTAGTTTCCATATGTTTTGATGAACCGGGATGGGAGTGGTCAGGCAGTTTCTTGCCAGATCATCTAGGTGATACACA AGTGAAAATGCGGAATAATGCTGGGGTGCTAAGAATGATAAGGGTGGAGGTACAGAATGCTAATGTTTCCGTTAAAGATGAAAAGATCATTGGAAGCCTC CATGGGAATTCTGGGACGAACTTGATTCTCTTGTCTGATGATGATACGGGTTTTATGCCATACAGAATTGATAATTTCTCGAAGGAGAGGTTACGGGTTT ACCAACAAAAATGTGAAAATTTTGACACAGTCATTCACCCTTACACTTCTTGCCCATATGCATGGGATGAACCCTGTTTTCCCCATCGTCTCACTGTTGA GGTTCCTGGACAGCGTGTCATTGGGTCCTATGCTCTTGATGATCTGAAAGAGTACATACCAGTGCAATTGAAGGCAACTGCTGAGAAGCCGGAAAGAACG TTGCTCTTATCTGTCCATGCTGAGGGAGCAATAAAGGTGCTCGGTATTGTTGATTCAAGTTTCCATGTTTTGAAAGATGTTAAAGATCCATCACCTCCAT GGTTCCGAGAAAAAACTAAACATGAACAGAAACAGAAAGATGTATTTTATTACAAGGAGAAATTCTCGGTCACTATTCCATATATTGGTATCTGCTTGAT TAATTCCTTTCCACAGGAACTGCTCTTTGCCTGTGCACAGAATATTAGCCTTAATCTTCTTCAAAGTTTGGATCAACAAAAGATTTCATTTCAAATCTCG TCATTGCAAATAGATAACCAGTTGCAAACAACACCATATCCTGTTATTCTGTCCTTCAATCAAGAATACCGAGGCAGCACAGAGGGCCAGAGAGTCAAGG ATGACATTGCTAAATCAAAGAGTGATAGAGTATTGCAAAGATCTCGTGAGCCTATACTATCACTCGCTGTAGCAACTTGGAGGAAGAAAGACATCTCCTT GGTTTCATTCGAGTATATAAGCTTAAGAGTGGCAAATTTCCGCCTTGAGCTTGATCAAGAAGTTATATTAAGATTGCTTGACTTCTATAAAGCTGTTTCT TCAAGGTTCCAGAGCAATGTCTTGCCATTTTCAGATCCCAAACACCCACCTCTTCTATGTGATGGGGGTTTCATTCATGCTCAAACTCGTGAATACTTCA AAACAATAGACAGCCAGCTGCTTGGAATCAACTTATCTTCATTGAGCAAGAGTCAAATTAATAGTGCAGCACTACCTCCAGTAGTTCCAATTGGAGCCCC CTGGCAACATATTTCCTTTTTGGATGGAAGACAGAAGAAGATCTATGTAGAACTGTTTGATTTGGCCCCCGTCAAGTTTACTTTGAGCTTTTCTAGTTCT CCATGGATGCTGAGAAATGGAATTCTTACATCAGGAGAATCTCTTATTCATAGAGGACTTATGGCTCTTGCTGATGTTGAGGGAGCTCGAATTCATCTCA AACAATTCAGAATTGAACATCAGATGGCTAGTTGGGAGTCCATGCAGGATATCCTCATCCGGCATTACACTCGTCAACTTCTTCATGAGATGTACAAGGT GTTTGGTTCTGCGGGTGTTATTGGTAACCCAATGGGATTTGCAAGGAGTTTAGGCCTTGGCATAAGAGACTTTTTATCTGTTCCTGCCAGAAGCTTTTTG CAGAGCCCCACTGGACTGATAACTGGCATGGCACAAGGTACCACTAGTCTTGTAAGTAACACAGTCTATGCTTTAAGTGATGCTGCCACCCAGTTCAGTA AAGCAGCTCAAAAGGGTATTGTTGCATTCACATTTGATGACCAGTCCGTTGCAAGAATGGAAAAGCAACAGAAAGGTGCAGCTTCACACAGTAAAGGTGT GATAAATGAAGTCCTTGAGGGGCTAACAGGTCTCCTTCAATCTCCAATAAAAGAAGCTGAGAAACATGGTCTTCCAGGTGTCCTCTCAGGAATTGCCTTT GGGGTTGCAGGGCTTGTGGCAAGACCAGCTGCTAGTATTCTTGAGGTTACTGGAAAAACTGCACAGAGTATCAGAAACCGAAGTCGGCTGTACCAAATGG GACCTCAATGCTATAGGGTCCGGCTGCCTAGGCCTCTAAGTAGAGAACTTCCTCTGAGGCCTTACTCTTTGGAAGAAGCAGTTGGAACTTCAGTGCTTAT GGAGGCTGATGATGGCTTGTATCTCAAGAATGAAGTTTTAGTGATATGCAAATCCCTTAAACAAGCTGGTAAATTTGTTGTTGTCACTGAGAGACTCGTG TTGACTGTTAGCTCTCCTGGTTTGGTAGATTTAGGAAAGCCTGAATTTCGAGGTGTTCCCATTGACCCGGAGTGGTTAGTAGAGTCAGAAATTAGTTTGG ACAGTGTCATCCATGTTGATGCCGTGGAAGAGGTGGTACATATTGTTGGAACCCGTTCAGATGCCTTACTGAAGCAGAACCAGCACCAGTCAAAAAAAGG GGTTCTGACACGAACAAAGAGCTGGAACAATCGAACTTCTCTTCCACTTTCCCTTACAAACTTGGAATTGGCATCCATGAACGATGCAAAGGAATTGTTA CAGATTTTGTTGTCTACGATTGCACAAGGTAAAGAACGTAGACTAGGCAGTGGATATGTTCTACATCGAAGTAATATCATGTAA
AA sequence Show only first row Show all	>Potri.001G455600.4 pacid=42790849 polypeptide=Potri.001G455600.4.p locus=Potri.001G455600 ID=Potri.001G455600.4.v4.1 annot-version=v4.1 MFEGLVHRVLVGYLGRYFKNIQKEQLKLSLWNEEVLLENVDLIPEAFDYLRLPFSIKQGRVGRLSIKLSWKKIGWDHPIIIAVEDVFICLSQREDQEWNL DAVERREFAAKKAQLAAAELSKLSKRICDNQAGKSFISYITAKVLDSIQLSIRNFHVQYSERQFDSAQVLFGLQFSNLTVKQNLVGSFGAKMVGGQVNKT ASIEGLEIYCTTSKGDIDSMGLDDAVDSKSWCSARNGGNEFDYLLQPLNVSVSLGVNRAGKLDSDLPQYSIRADLNELAVSLNEIQLQRILILSDYLSTS SLREKYGRYRPWGCPLSRKQDGWQRLWWHYAQESILADVRLKLKKTSWRYLGQRLSFRRKYINLYQTKLEFLHREQAIDEYIIQDLEQMEKESDIDDILS YRSVAELKLQEVLSNSLSSNMEVNGAHSFIEKSQNDERSSSGSRGWLNWISRGMLGAGGTDDSTQFSGVVSDEVVKDIYEATEFQPSVLSSGDVDANYKM FTCAMKFTVGCITATLQSKSYSKKIADLIFNELVIECKLWEELATVVCHFRSGEMFDPCNKRVILQIGRSLTDGNVREDEPPSCRFQVDISPKRDIELSV KVMLQLLEVSCDLELFLSLWELFTVFKSFEFQLERVLLSLNGIEDVRTRLLSKVEYILSSHKKLSWDVNVINIIINVPWRKATQEEHKLVLKLKSFSYTS KFDADSVASIIEEQSSIPKRFSSSISASNIFTGFQIQDLYNYFEVKLNDIELILITPQHAQAISILEKFCASVALASCIISDQSVLKQLEVYVNLSALNA SFSPPIYESVVAFIAHMENLCSRSEPLMLKNPNSPVVITNRPGASDFGFGFSVSARLDLVSFCFDLANDGENSSELVFSLQGLDIWLSHTQFDEFWVCTK ALKITTSPLRGENDGHILCLSGKQLSSNSANHEDLGIRHGNQDGNLERSLTEVCFLLHYEAYRRADTVVNKCTVGLNDIDFHCYPYIVGLLVGFYNKLSA YGSPFTSDDSFSLVTEAKSPRRRAGLEFERFGYSNFIETGSSDHASISLDNYPFVTLCNSASLGSIESSLHYPIADWRRLFNLRERKIKSTKFCLKNGLK TFDASPLTFTSVVDTSAAPGIISDANLLNIDINLCGVRVHFHDSSCIVGTVALPTLKSSLSIYEDSMDLLCSAEGLVLTSSWWTKNFQEFLWGPSLPNLS PILNLRVRKGKFGSLPSELEVSIGIQHVYCMLPPEFLAIIIGYFSLPDWSLNLSEQPMKMENKSHVVYKFEILDSTLILPVEHDDHQFLKIEIQQLFCSF IDKCAPNDAMMNIPPDYMVPAHKVAKANHCLNMFGRDLSLSFLLSREDEHGCLELDQDTGCGNITLIAALSLDLWVWLPCDDESCFESSSVSTCIMSRIT DCQLIADDCYSLDGFEALLDVIDQFSSVDDQSKNFGSDVLHFLQWKRSQKENCEVSPAASGTVSLEVQCSVDSLLIKLYHSREGSTLLEPIAKIDVKFKC SASLVNETLMVLDFGFSSLALYSLPSSVLLAQCTGSSSASSALHLCFLKSVEGENELNISLPSVSIWLHLFDWTGIIDLCNSYAKRIAENEAVRASSMSS SKDLVDPTETVICAVSQNSPQNISVPSSYVHNYVRQDSVSLIVRSENIGLTVHFPVCATETLPGEIQAAIVQERRPQDVASNTTERKNNKFIAITTHSRR TELSMVGKIVTLKCSLQKAMGTVGICEDESITTWPLFETSQVVVSTEIFNSQLESVNINLGVQCDRLDVQLSHQVLCFWHGVQLDIAEAGTSRSLFGHMD FKIQLRKISFLVSDERWSFGGPLLEIAMRNFLLHAIVTENSMESSVASDLEVNYNNIHKVLWEPFVEPWKFQINMIRKQEMTAHLNSSILTDIDVTSTMQ LNLNCTESLIECFFRTLEMVNDAWHLGPNDPFENQRSSSSQLSENVHEGSYAPYVLQNLTSLPLGYHVFKGLVNADEFDFSEMKDAKSIQPGSSVPIYLN ETLEEQLFRCGPAQSSDRLSEKQSNGAVHHFMSIQLDGMFLPSPPISMDLVGLTYFEVDFTKVLKRTEMEKTRNVSKYDMDLEENARFNTDGGFVVPVVF DVSVQRYTKLIRLYSTVILANATSVPLELRFDIPFGLSPKLLLFLQVLDPIYPDQEFPLPLHLAEAGRMRWRPLGNSYLWSEVHDISNILSHESKIGFLR SFVCYPSHPSSDPFRCCISVHSFSLPSSKKLKKGSYNTLRQSFESFDGDQKKSSNRFIHQVTLSAPLVVINYLPDEVSLAIESGGVTRTVLLSELETSFH HIDPSYDLGMEFCIHGFRPSTLKFPRAETFCTMAKFSGTKFSLTDTVSFDSDSSDGLLCVTVEKMMDAFSGARELFIYVPFLLYNCTGFPLNISECNSEM KGSHCTIPSCYVLVEDECLQGRKDGLSHLSFDQDSHLRAPHIISSGSSSSKNNVLLSRRDATSHLGRVISKPLILSSSSGPLQEQSDKHDLVCQKASFDK CSSTDSIDTGRGEVKACMYSPHGVSSANEIMVRVSRHEFVMENASHSTWSRPFLLIPPSGSSTVFVPQSSSNSALIISVTSSDVAGSFAGRTQAIAFQPR YIISNVCSKKICYKQKGTDYSVRLGIGQHHHLHWKDTTRELLVSICFDEPGWEWSGSFLPDHLGDTQVKMRNNAGVLRMIRVEVQNANVSVKDEKIIGSL HGNSGTNLILLSDDDTGFMPYRIDNFSKERLRVYQQKCENFDTVIHPYTSCPYAWDEPCFPHRLTVEVPGQRVIGSYALDDLKEYIPVQLKATAEKPERT LLLSVHAEGAIKVLGIVDSSFHVLKDVKDPSPPWFREKTKHEQKQKDVFYYKEKFSVTIPYIGICLINSFPQELLFACAQNISLNLLQSLDQQKISFQIS SLQIDNQLQTTPYPVILSFNQEYRGSTEGQRVKDDIAKSKSDRVLQRSREPILSLAVATWRKKDISLVSFEYISLRVANFRLELDQEVILRLLDFYKAVS SRFQSNVLPFSDPKHPPLLCDGGFIHAQTREYFKTIDSQLLGINLSSLSKSQINSAALPPVVPIGAPWQHISFLDGRQKKIYVELFDLAPVKFTLSFSSS PWMLRNGILTSGESLIHRGLMALADVEGARIHLKQFRIEHQMASWESMQDILIRHYTRQLLHEMYKVFGSAGVIGNPMGFARSLGLGIRDFLSVPARSFL QSPTGLITGMAQGTTSLVSNTVYALSDAATQFSKAAQKGIVAFTFDDQSVARMEKQQKGAASHSKGVINEVLEGLTGLLQSPIKEAEKHGLPGVLSGIAF GVAGLVARPAASILEVTGKTAQSIRNRSRLYQMGPQCYRVRLPRPLSRELPLRPYSLEEAVGTSVLMEADDGLYLKNEVLVICKSLKQAGKFVVVTERLV LTVSSPGLVDLGKPEFRGVPIDPEWLVESEISLDSVIHVDAVEEVVHIVGTRSDALLKQNQHQSKKGVLTRTKSWNNRTSLPLSLTNLELASMNDAKELL QILLSTIAQGKERRLGSGYVLHRSNIM

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT5G24740			Protein of unknown function (D...		Potri.001G455600 [exp]	0	1
AT1G58230			binding (.1)		Potri.002G111000 [exp]	1.00	0.9090
AT5G12430		TPR16	tetratricopeptide repeat 16, H...		Potri.009G050200 [exp]	2.00	0.8594
AT3G06670			binding (.1.2)		Potri.008G107300 [exp]	2.00	0.8941
AT2G28290		CHR3, SYD	SPLAYED, CHROMATIN REMODELING ...		Potri.010G019150 [exp]	3.46	0.8615
AT5G24350			unknown protein		Potri.012G020000 [exp]	4.58	0.8533
AT1G50030		TOR	target of rapamycin (.1.2)		Potri.001G289200 [exp]	4.89	0.8569	Pt-TOR.1
AT3G04160			unknown protein		Potri.019G029400 [exp]	5.00	0.8578
AT5G60410		ATSIZ1, SIZ1	DNA-binding protein with MIZ/S...		Potri.004G210200 [exp]	6.24	0.7919
AT4G11110		SPA2	SPA1-related 2 (.1)		Potri.003G137100 [exp]	6.63	0.8067
AT2G36810			ARM repeat superfamily protein...		Potri.006G120800 [exp]	7.34	0.8033

Compare expression of checked genes

Potri.001G455600 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.