Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol	Pt-CYP722.2
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G19630 607 / 0 CYP722A1 "cytochrome P450, family 722, subfamily A, polypeptide 1", cytochrome P450, family 722, subfamily A, polypeptide 1 (.1) AT4G19230 248 / 1e-76 CYP707A1 "cytochrome P450, family 707, subfamily A, polypeptide 1", cytochrome P450, family 707, subfamily A, polypeptide 1 (.1.2) AT3G19270 247 / 3e-76 CYP707A4 "cytochrome P450, family 707, subfamily A, polypeptide 4", cytochrome P450, family 707, subfamily A, polypeptide 4 (.1) AT2G29090 245 / 2e-75 CYP707A2 "cytochrome P450, family 707, subfamily A, polypeptide 2", cytochrome P450, family 707, subfamily A, polypeptide 2 (.1.2) AT5G45340 243 / 2e-74 CYP707A3 "cytochrome P450, family 707, subfamily A, polypeptide 3", cytochrome P450, family 707, subfamily A, polypeptide 3 (.1.2) AT4G36380 224 / 8e-67 ROT3 ROTUNDIFOLIA 3, Cytochrome P450 superfamily protein (.1) AT3G13730 222 / 2e-66 CYP90D1 "cytochrome P450, family 90, subfamily D, polypeptide 1", cytochrome P450, family 90, subfamily D, polypeptide 1 (.1) AT5G05690 218 / 4e-65 CBB3, DWF3, CYP90A1, CYP90A, CPD DWARF 3, CYTOCHROME P450 90A1, CONSTITUTIVE PHOTOMORPHOGENIC DWARF, CABBAGE 3, Cytochrome P450 superfamily protein (.1.2.3) AT2G42850 216 / 3e-64 CYP718 "cytochrome P450, family 718", cytochrome P450, family 718 (.1) AT3G30180 208 / 2e-61 CYP85A2, BR6OX2 brassinosteroid-6-oxidase 2 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.002G069600 [exp] 327 / 7e-107 AT5G45340 296 / 1e-95 "cytochrome P450, family 707, subfamily A, polypeptide 3", cytochrome P450, family 707, subfamily A, polypeptide 3 (.1.2) Potri.001G242600 [exp] 259 / 2e-80 AT2G29090 652 / 0.0 "cytochrome P450, family 707, subfamily A, polypeptide 2", cytochrome P450, family 707, subfamily A, polypeptide 2 (.1.2) Potri.009G101700 [exp] 251 / 7e-78 AT3G19270 711 / 0.0 "cytochrome P450, family 707, subfamily A, polypeptide 4", cytochrome P450, family 707, subfamily A, polypeptide 4 (.1) Potri.004G140900 [exp] 251 / 8e-78 AT3G19270 731 / 0.0 "cytochrome P450, family 707, subfamily A, polypeptide 4", cytochrome P450, family 707, subfamily A, polypeptide 4 (.1) Potri.014G029100 [exp] 251 / 9e-78 AT3G19270 665 / 0.0 "cytochrome P450, family 707, subfamily A, polypeptide 4", cytochrome P450, family 707, subfamily A, polypeptide 4 (.1) Potri.009G033900 [exp] 251 / 2e-77 AT2G29090 677 / 0.0 "cytochrome P450, family 707, subfamily A, polypeptide 2", cytochrome P450, family 707, subfamily A, polypeptide 2 (.1.2) Potri.004G235400 [exp] 243 / 8e-75 AT4G19230 778 / 0.0 "cytochrome P450, family 707, subfamily A, polypeptide 1", cytochrome P450, family 707, subfamily A, polypeptide 1 (.1.2) Potri.002G126100 [exp] 239 / 4e-73 AT3G19270 666 / 0.0 "cytochrome P450, family 707, subfamily A, polypeptide 4", cytochrome P450, family 707, subfamily A, polypeptide 4 (.1) Potri.004G017800 [exp] 229 / 2e-69 AT5G36110 317 / 1e-103 "cytochrome P450, family 716, subfamily A, polypeptide 1", cytochrome P450, family 716, subfamily A, polypeptide 1 (.1)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10024272 [exp] 610 / 0 AT1G19630 592 / 0.0 "cytochrome P450, family 722, subfamily A, polypeptide 1", cytochrome P450, family 722, subfamily A, polypeptide 1 (.1) Lus10018898 [exp] 328 / 4e-107 AT5G45340 301 / 3e-97 "cytochrome P450, family 707, subfamily A, polypeptide 3", cytochrome P450, family 707, subfamily A, polypeptide 3 (.1.2) Lus10028594 [exp] 321 / 1e-104 AT5G45340 299 / 1e-96 "cytochrome P450, family 707, subfamily A, polypeptide 3", cytochrome P450, family 707, subfamily A, polypeptide 3 (.1.2) Lus10014285 [exp] 267 / 6e-85 AT1G19630 249 / 2e-78 "cytochrome P450, family 722, subfamily A, polypeptide 1", cytochrome P450, family 722, subfamily A, polypeptide 1 (.1) Lus10035685 [exp] 244 / 3e-75 AT4G19230 714 / 0.0 "cytochrome P450, family 707, subfamily A, polypeptide 1", cytochrome P450, family 707, subfamily A, polypeptide 1 (.1.2) Lus10021725 [exp] 243 / 6e-75 AT3G19270 633 / 0.0 "cytochrome P450, family 707, subfamily A, polypeptide 4", cytochrome P450, family 707, subfamily A, polypeptide 4 (.1) Lus10042652 [exp] 240 / 3e-73 AT3G19270 647 / 0.0 "cytochrome P450, family 707, subfamily A, polypeptide 4", cytochrome P450, family 707, subfamily A, polypeptide 4 (.1) Lus10033308 [exp] 239 / 4e-73 AT5G45340 732 / 0.0 "cytochrome P450, family 707, subfamily A, polypeptide 3", cytochrome P450, family 707, subfamily A, polypeptide 3 (.1.2) Lus10034768 [exp] 231 / 3e-70 AT5G45340 731 / 0.0 "cytochrome P450, family 707, subfamily A, polypeptide 3", cytochrome P450, family 707, subfamily A, polypeptide 3 (.1.2) Lus10016515 [exp] 227 / 3e-68 AT2G29090 554 / 0.0 "cytochrome P450, family 707, subfamily A, polypeptide 2", cytochrome P450, family 707, subfamily A, polypeptide 2 (.1.2)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF00067 [poplar] [flax] p450 Cytochrome P450
Representative CDS sequence Show only first row Show all	>Potri.002G033000.3 pacid=42778954 polypeptide=Potri.002G033000.3.p locus=Potri.002G033000 ID=Potri.002G033000.3.v4.1 annot-version=v4.1 ATGCTTCCTCTCTCATCTTATATGCTTTCTTGCCTTTGTTTCTACACGGTGCTTCTTCTTGGCAGCTTGTTTCTTTTGTATCTTGGATTCTTTAAGATGC TAGGGTATCGTAACCGGATTGCAGAGGCTGATATCCCACCGGGTAGTTGTGGATTGCCGTTGATCGGAGAGACCATACAGTTCATGGCAGCCATGAATAA TGGCAGAGGTTTTTACGACTTCGTCCGAGCTCGCCGTCTAAGGTATGGGAATTGCTTCAAGACCAACATCCTTGGACTGGCACAAGTTTTTGTTTCAAGC ACAGAATCGGCTAAGATAATCTTAAATAATGAATCGGGAAAATTCACGAAGAGATACATAAAATCAATCGCAGAGCTTGTGGGAGATCAAAGCCTGCTAT GCGCTTCTCATGGACACCACAAACTCATCCGTAGCTGTTTGACACATTTATTCTCAACAAGTTCCATTTCTGTTTTTATCAAACAGTTCGATGAACTGGT TGTGAAAAGTCTTGGCACCTGGCAAGTTGGGGACACAATAGTTGTTCTTGACCAGGCAACCGAGATAACCTTCAAAGCCATGTGCAGGATGTTGATGAGC TTAGAGGATGAGCCGAAACTACAAATGCTGCAAGAGGACATAACTCATGTCTGTGAAGCAATGCTCGCATTCCCTGTAAGGTTTCCTTGGACTAGATTTT ACAAAGGCCTTAAGGCCAGGAAAAGGATTATGAGCACACTGGATTTGATCATGACTGAAAGAAGAAGATGCTCACAAGGCAATCAAAAAGATTTTATGCA ATGCCTATTGGTAGAAGATGAAAAGCCAGGTTCTGATGAGGCCTATACGATGACAGACACAGAGATAAAAGACAACATTTTGACCATGATTATTGCAGGT CAGGATACAACTGCAAGTGCAATCACATGGATGGTCAAGTATCTAGGAGAAAATCAAGATGTTCTAGACACCCTTAGAGCAGAGCAACTTCACCTTGCAG AAAAAATTTCACCAGGGCCATTTCTCACACTGGAAGATCTTGCTGAGATGCCATACGCTTCTAAGGTAGTCAAAGAATCATTAAGGATGGCATCTATAGT ACCTTGGTTTCCAAGATTAGCACTTCAAGATTGTGAGATTGAAGGATTTAAGATAAAGAAAGGGTGGAACATTAATGTTGATGTTAAATCAATACACCTT GACCCTAATCTTTACAATGGCCCCAATAAGTTCAATCCTACAAGGTTTAATGATGACTCAAAGCCATACAGCTTCTTAGCATTTGGGATGGGAGCAAGAA CCTGCCTGGGAATGAACATGGCTAAAGCCATGATGCTTGTCTTCCTTCATCGTCTGATCACAACATACAAGTGGAAGGTGATAGACTCAGATTCAAGTAT TGAGAAATGGGCATTGTTCTCCAGATTAAAAAGTGGCTGTCCGGTTCAAGTAACTCGTATTGATAATAGAAAGGATGATACCTCTGCGTATGGCTCGCAT TAA
AA sequence Show only first row Show all	>Potri.002G033000.3 pacid=42778954 polypeptide=Potri.002G033000.3.p locus=Potri.002G033000 ID=Potri.002G033000.3.v4.1 annot-version=v4.1 MLPLSSYMLSCLCFYTVLLLGSLFLLYLGFFKMLGYRNRIAEADIPPGSCGLPLIGETIQFMAAMNNGRGFYDFVRARRLRYGNCFKTNILGLAQVFVSS TESAKIILNNESGKFTKRYIKSIAELVGDQSLLCASHGHHKLIRSCLTHLFSTSSISVFIKQFDELVVKSLGTWQVGDTIVVLDQATEITFKAMCRMLMS LEDEPKLQMLQEDITHVCEAMLAFPVRFPWTRFYKGLKARKRIMSTLDLIMTERRRCSQGNQKDFMQCLLVEDEKPGSDEAYTMTDTEIKDNILTMIIAG QDTTASAITWMVKYLGENQDVLDTLRAEQLHLAEKISPGPFLTLEDLAEMPYASKVVKESLRMASIVPWFPRLALQDCEIEGFKIKKGWNINVDVKSIHL DPNLYNGPNKFNPTRFNDDSKPYSFLAFGMGARTCLGMNMAKAMMLVFLHRLITTYKWKVIDSDSSIEKWALFSRLKSGCPVQVTRIDNRKDDTSAYGSH

---

DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

---

Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT1G19630		CYP722A1	"cytochrome P450, family 722, ...		Potri.002G033000 [exp]	0	1	Pt-CYP722.2
AT1G23380	HD	KNAT6S, KNAT6L,...	KNOTTED1-like homeobox gene 6 ...		Potri.010G043500 [exp]	3.46	0.8738
AT3G13540	MYB	ATMYB5, ATM2	myb domain protein 5 (.1)		Potri.006G221200 [exp]	4.00	0.8514
AT2G28305		ATLOG1	LONELY GUY 1, Putative lysine ...		Potri.001G265300 [exp]	4.35	0.8206
AT3G43630			Vacuolar iron transporter (VIT...		Potri.002G069400 [exp]	4.79	0.8811
AT4G02590	bHLH	bHLH059, UNE12	unfertilized embryo sac 12, ba...		Potri.005G217800 [exp]	4.89	0.8494
AT5G56460			Protein kinase superfamily pro...		Potri.001G002300 [exp]	4.89	0.8473
AT4G09890			Protein of unknown function (D...		Potri.007G077500 [exp]	9.32	0.8578
AT2G40200	bHLH	bHLH051	basic helix-loop-helix (bHLH) ...		Potri.010G186700 [exp]	10.24	0.8370
AT5G59020			Protein of unknown function (D...		Potri.001G246200 [exp]	13.56	0.7502
AT5G19640			Major facilitator superfamily ...		Potri.001G013400 [exp]	15.68	0.7841

Compare expression of checked genes

Potri.002G033000 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.