Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol	Pt-CYP94.3
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT3G48520 450 / 2e-154 CYP94B3 cytochrome P450, family 94, subfamily B, polypeptide 3 (.1) AT5G63450 442 / 3e-151 CYP94B1 "cytochrome P450, family 94, subfamily B, polypeptide 1", cytochrome P450, family 94, subfamily B, polypeptide 1 (.1) AT3G56630 430 / 2e-146 CYP94D2 "cytochrome P450, family 94, subfamily D, polypeptide 2", cytochrome P450, family 94, subfamily D, polypeptide 2 (.1) AT3G01900 425 / 1e-144 CYP94B2 "cytochrome P450, family 94, subfamily B, polypeptide 2", cytochrome P450, family 94, subfamily B, polypeptide 2 (.1) AT1G34540 422 / 1e-143 CYP94D1 "cytochrome P450, family 94, subfamily D, polypeptide 1", cytochrome P450, family 94, subfamily D, polypeptide 1 (.1) AT2G27690 407 / 1e-137 CYP94C1 "cytochrome P450, family 94, subfamily C, polypeptide 1", cytochrome P450, family 94, subfamily C, polypeptide 1 (.1) AT5G08250 353 / 7e-117 Cytochrome P450 superfamily protein (.1) AT1G63710 350 / 6e-115 CYP86A7 "cytochrome P450, family 86, subfamily A, polypeptide 7", cytochrome P450, family 86, subfamily A, polypeptide 7 (.1) AT5G23190 346 / 6e-113 CYP86B1 "cytochrome P450, family 86, subfamily B, polypeptide 1", cytochrome P450, family 86, subfamily B, polypeptide 1 (.1) AT1G24540 343 / 1e-112 CYP86C1 "cytochrome P450, family 86, subfamily C, polypeptide 1", cytochrome P450, family 86, subfamily C, polypeptide 1 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.002G042200 [exp] 896 / 0 AT5G63450 442 / 3e-151 "cytochrome P450, family 94, subfamily B, polypeptide 1", cytochrome P450, family 94, subfamily B, polypeptide 1 (.1) Potri.005G220700 [exp] 871 / 0 AT3G48520 436 / 4e-149 cytochrome P450, family 94, subfamily B, polypeptide 3 (.1) Potri.005G220900 [exp] 863 / 0 AT3G48520 414 / 2e-140 cytochrome P450, family 94, subfamily B, polypeptide 3 (.1) Potri.012G096800 [exp] 443 / 1e-151 AT3G48520 611 / 0.0 cytochrome P450, family 94, subfamily B, polypeptide 3 (.1) Potri.016G031700 [exp] 439 / 3e-150 AT3G56630 629 / 0.0 "cytochrome P450, family 94, subfamily D, polypeptide 2", cytochrome P450, family 94, subfamily D, polypeptide 2 (.1) Potri.001G331100 [exp] 424 / 3e-144 AT3G01900 597 / 0.0 "cytochrome P450, family 94, subfamily B, polypeptide 2", cytochrome P450, family 94, subfamily B, polypeptide 2 (.1) Potri.004G185300 [exp] 416 / 2e-141 AT2G27690 604 / 0.0 "cytochrome P450, family 94, subfamily C, polypeptide 1", cytochrome P450, family 94, subfamily C, polypeptide 1 (.1) Potri.006G033600 [exp] 412 / 8e-140 AT3G56630 576 / 0.0 "cytochrome P450, family 94, subfamily D, polypeptide 2", cytochrome P450, family 94, subfamily D, polypeptide 2 (.1) Potri.009G145400 [exp] 408 / 3e-138 AT2G27690 622 / 0.0 "cytochrome P450, family 94, subfamily C, polypeptide 1", cytochrome P450, family 94, subfamily C, polypeptide 1 (.1)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10014741 [exp] 678 / 0 AT5G63450 461 / 1e-158 "cytochrome P450, family 94, subfamily B, polypeptide 1", cytochrome P450, family 94, subfamily B, polypeptide 1 (.1) Lus10014742 [exp] 663 / 0 AT5G63450 451 / 8e-155 "cytochrome P450, family 94, subfamily B, polypeptide 1", cytochrome P450, family 94, subfamily B, polypeptide 1 (.1) Lus10033853 [exp] 654 / 0 AT5G63450 474 / 7e-164 "cytochrome P450, family 94, subfamily B, polypeptide 1", cytochrome P450, family 94, subfamily B, polypeptide 1 (.1) Lus10033852 [exp] 632 / 0 AT5G63450 457 / 4e-157 "cytochrome P450, family 94, subfamily B, polypeptide 1", cytochrome P450, family 94, subfamily B, polypeptide 1 (.1) Lus10041562 [exp] 422 / 5e-143 AT3G01900 597 / 0.0 "cytochrome P450, family 94, subfamily B, polypeptide 2", cytochrome P450, family 94, subfamily B, polypeptide 2 (.1) Lus10012531 [exp] 414 / 7e-140 AT3G01900 592 / 0.0 "cytochrome P450, family 94, subfamily B, polypeptide 2", cytochrome P450, family 94, subfamily B, polypeptide 2 (.1) Lus10036024 [exp] 411 / 1e-138 AT3G56630 380 / 3e-127 "cytochrome P450, family 94, subfamily D, polypeptide 2", cytochrome P450, family 94, subfamily D, polypeptide 2 (.1) Lus10040687 [exp] 340 / 2e-111 AT5G58860 803 / 0.0 "cytochrome P450, family 86, subfamily A, polypeptide 1", cytochrome P450, family 86, subfamily A, polypeptide 1 (.1) Lus10018217 [exp] 339 / 8e-111 AT5G58860 802 / 0.0 "cytochrome P450, family 86, subfamily A, polypeptide 1", cytochrome P450, family 86, subfamily A, polypeptide 1 (.1) Lus10010193 [exp] 336 / 3e-109 AT5G23190 741 / 0.0 "cytochrome P450, family 86, subfamily B, polypeptide 1", cytochrome P450, family 86, subfamily B, polypeptide 1 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF00067 [poplar] [flax] p450 Cytochrome P450
Representative CDS sequence Show only first row Show all	>Potri.002G042100.1 pacid=42777897 polypeptide=Potri.002G042100.1.p locus=Potri.002G042100 ID=Potri.002G042100.1.v4.1 annot-version=v4.1 ATGTCTATTATTGAGCTGTTAGCATCAATTGCCCTTGTTGTCTCACTCTTCTTCTATCTCACCAAAAACTCCAACTCCAAAGCATCATCAAAATCCAATC CATATCTCCCAAAACCATACCCCTTAATTGGATCCTCTGTAGCCATCTATGCCAATAGAAACCGAGTCATCCAATGGACATCAGATCTTATCCAAAACTC CCCCACTGCCACTATTGTTCTCCACCGTTTCTTGGATGACAGCCGTGTCCATACAGGAAACCCAGCAAATGTCCAACATATACTTAAAACCCAGTTTCAC AACTATGGGAAAGGCAGCAAATTTCGGCGAATTCTCTTCGATTTTCTTGGAAACGGTATCTTTAACATTGATGGCGATTCTTGGAAGTTTCAAAGGCAAG TTTCCAGCAATGAATTCAACACCAAATCACTGCGTAAATTCGTCGAGACCCTCGTTGATACTGAACTCTCTCAACGCTTGATCCCGATTCTCTCCTCCGC TGCTGCTAACAATACAGTTCTTGATTTGCAAGACATACTTCAAAGATTCGCTTTTGACAACATATGCAATATCGCTTTCGGATACGACCCTGCATACTTG CTGCCTGATCTCCCTGAAGCAGAATTTGCAAAAACTTTCGATGACGCTGCCAAGATAAGCAGCGAGAGGTTAAATTCAGTTTTCCCCTATCTTTGGAAGA TTAAAAGGGTCTTGAATATTGGTTCAGAGAAACGCCTCAAAGAAGCATCCTCTCAACTACGTCAGTTCGCCAAAAATATCATCAAAGAAAAGAAGCAAGA ACTCAGCAAAAAACCATCACTCGAATCCGTCGATCTATTATCCCGGTTCTTGAGCTCTGGTCATTCTGATGAAGACTTTGTCACTGATATTGTCATCAGT TTTATACTAGCTGGCCGGGACACGACTTCTGCTGCCTTAACATGGTATTTCTGGCTACTCTCTCAGAACCAAGAAGTGGAGAAGGAAGTACTTAGGGAAA TAAAAGAGAAATCGGAGAGTCCAGTTTATGAGGAAGTTAAGGACATGGTTTACACACATGCTTCTTTATGTGAGAGCATGAGGCTGTACCCTCCTGTCCC AATAGATAGCAAGGTTGCAAAGCACGACGATGTTTTGCCTGATGGGACTGTGGTTAAGAAGGGTATGAGAGTATCTTACCATCCCTATGCAATGGGGAGG CTCGAGGTGTTGTGGGGTTCAGATTGGGAAAAGTTCAAGCCAGAGAGATGGCTGGAGAGTGCTGCCGATGGAGCTACTAAGAATGGGAAGTGGAGTTTTG TGGGGAGGGACCCGTATACCTACCCTGTTTTTCAGGCTGGGCCAAGGATTTGTTTGGGTAAGGACATGGCTTTCTTGCAAATGAAGAAGGTGGTGGCTGG AATATTACGGAGGTTTAAGGTTGTACCGGTGGCAGAGGATGGTTTTGAGCCCGAGTTTGTTGCTTATTTGACGGGCAAGATGAAGGGTGGTTTTCCTGTG AGGTTCGAGAAGAGAGCTGACGGTAAGAATTCCCTTGATTGTCAGCACCTTTGA
AA sequence Show only first row Show all	>Potri.002G042100.1 pacid=42777897 polypeptide=Potri.002G042100.1.p locus=Potri.002G042100 ID=Potri.002G042100.1.v4.1 annot-version=v4.1 MSIIELLASIALVVSLFFYLTKNSNSKASSKSNPYLPKPYPLIGSSVAIYANRNRVIQWTSDLIQNSPTATIVLHRFLDDSRVHTGNPANVQHILKTQFH NYGKGSKFRRILFDFLGNGIFNIDGDSWKFQRQVSSNEFNTKSLRKFVETLVDTELSQRLIPILSSAAANNTVLDLQDILQRFAFDNICNIAFGYDPAYL LPDLPEAEFAKTFDDAAKISSERLNSVFPYLWKIKRVLNIGSEKRLKEASSQLRQFAKNIIKEKKQELSKKPSLESVDLLSRFLSSGHSDEDFVTDIVIS FILAGRDTTSAALTWYFWLLSQNQEVEKEVLREIKEKSESPVYEEVKDMVYTHASLCESMRLYPPVPIDSKVAKHDDVLPDGTVVKKGMRVSYHPYAMGR LEVLWGSDWEKFKPERWLESAADGATKNGKWSFVGRDPYTYPVFQAGPRICLGKDMAFLQMKKVVAGILRRFKVVPVAEDGFEPEFVAYLTGKMKGGFPV RFEKRADGKNSLDCQHL

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT3G48520		CYP94B3	cytochrome P450, family 94, su...		Potri.002G042100 [exp]	0	1	Pt-CYP94.3
AT4G14550	AUX_IAA	SLR, IAA14	SOLITARY ROOT, indole-3-acetic...		Potri.002G044900 [exp]	1.00	0.9324	Pt-AUX28.3
AT5G67390			unknown protein		Potri.005G145800 [exp]	2.00	0.8964
AT1G34300			lectin protein kinase family p...		Potri.016G102700 [exp]	4.58	0.8724
AT1G34110			Leucine-rich receptor-like pro...		Potri.005G198000 [exp]	4.89	0.8900
AT5G04820	OFP	ATOFP13, OFP13	ARABIDOPSIS THALIANA OVATE FAM...		Potri.008G017500 [exp]	6.92	0.8711
AT2G26640		KCS11	3-ketoacyl-CoA synthase 11 (.1...		Potri.008G160000 [exp]	7.48	0.8874
AT4G24140		BDG3	alpha/beta-Hydrolases superfam...		Potri.003G147400 [exp]	15.65	0.8873
AT5G12460			Protein of unknown function (D...		Potri.009G051600 [exp]	18.38	0.8455
AT2G22590			UDP-Glycosyltransferase superf...		Potri.012G034100 [exp]	20.56	0.8661
AT5G50400		ATPAP27, PAP27	ARABIDOPSIS THALIANA PURPLE AC...		Potri.015G095900 [exp]	22.97	0.8309	Pt-PPD3.1

Compare expression of checked genes

Potri.002G042100 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.