Potri.002G049600 [POPLAR]


External link
JGI Phytozome v13PopgenieAspWood                  
Symbol
Arabidopsis homologues
Locus ID BLAST score/e-value TF class Alias TAIR10 short description
AT1G03080 1233 / 0 kinase interacting (KIP1-like) family protein (.1)
AT4G14760 871 / 0 kinase interacting (KIP1-like) family protein (.1)
AT3G22790 786 / 0 Kinase interacting (KIP1-like) family protein (.1)
AT4G02710 608 / 0 Kinase interacting (KIP1-like) family protein (.1)
AT2G22560 154 / 1e-37 Kinase interacting (KIP1-like) family protein (.1)
AT2G30500 146 / 2e-36 Kinase interacting (KIP1-like) family protein (.1), Kinase interacting (KIP1-like) family protein (.2)
AT5G10500 149 / 5e-36 Kinase interacting (KIP1-like) family protein (.1)
AT1G09720 145 / 9e-35 Kinase interacting (KIP1-like) family protein (.1)
AT5G58320 135 / 2e-32 Kinase interacting (KIP1-like) family protein (.1), Kinase interacting (KIP1-like) family protein (.2), Kinase interacting (KIP1-like) family protein (.3)
AT2G47920 108 / 4e-26 Kinase interacting (KIP1-like) family protein (.1)
Paralogs
Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description
Potri.005G213400 2805 / 0 AT1G03080 1399 / 0.0 kinase interacting (KIP1-like) family protein (.1)
Potri.010G083300 1247 / 0 AT3G22790 1306 / 0.0 Kinase interacting (KIP1-like) family protein (.1)
Potri.008G156200 717 / 0 AT3G22790 762 / 0.0 Kinase interacting (KIP1-like) family protein (.1)
Potri.008G156250 540 / 6e-175 AT3G22790 519 / 7e-168 Kinase interacting (KIP1-like) family protein (.1)
Potri.007G011300 157 / 2e-38 AT2G22560 851 / 0.0 Kinase interacting (KIP1-like) family protein (.1)
Potri.005G147300 155 / 1e-37 AT2G22560 421 / 2e-131 Kinase interacting (KIP1-like) family protein (.1)
Potri.013G158100 152 / 1e-37 AT2G30500 384 / 7e-127 Kinase interacting (KIP1-like) family protein (.1), Kinase interacting (KIP1-like) family protein (.2)
Potri.002G106400 150 / 4e-36 AT1G58210 702 / 0.0 EMBRYO DEFECTIVE 1674, kinase interacting family protein (.1)
Potri.019G131000 147 / 4e-36 AT2G30500 389 / 4e-129 Kinase interacting (KIP1-like) family protein (.1), Kinase interacting (KIP1-like) family protein (.2)
Flax homologues
Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description
Lus10022079 1642 / 0 AT1G03080 1179 / 0.0 kinase interacting (KIP1-like) family protein (.1)
Lus10014687 1157 / 0 AT1G03080 938 / 0.0 kinase interacting (KIP1-like) family protein (.1)
Lus10039359 1114 / 0 AT3G22790 1402 / 0.0 Kinase interacting (KIP1-like) family protein (.1)
Lus10006896 1108 / 0 AT1G03080 927 / 0.0 kinase interacting (KIP1-like) family protein (.1)
Lus10042627 670 / 0 AT4G02710 624 / 0.0 Kinase interacting (KIP1-like) family protein (.1)
Lus10041192 592 / 0 AT4G14760 744 / 0.0 kinase interacting (KIP1-like) family protein (.1)
Lus10021908 587 / 0 AT4G14760 710 / 0.0 kinase interacting (KIP1-like) family protein (.1)
Lus10006606 221 / 3e-60 AT3G22790 368 / 3e-111 Kinase interacting (KIP1-like) family protein (.1)
Lus10002655 150 / 4e-36 AT2G22560 511 / 9e-164 Kinase interacting (KIP1-like) family protein (.1)
Lus10035944 139 / 9e-33 AT5G10500 280 / 3e-78 Kinase interacting (KIP1-like) family protein (.1)
PFAM info
Clan ID Clan name Pfam ID Pfam name Pfam description
PF07765 KIP1 KIP1-like protein
Representative CDS sequence
>Potri.002G049600.1 pacid=42779933 polypeptide=Potri.002G049600.1.p locus=Potri.002G049600 ID=Potri.002G049600.1.v4.1 annot-version=v4.1
ATGGCTGCCAGGTCGCAAGCAGATTCTAAAAGGAAGTATTCGTGGTGGTGGGACAGCCACATTAGCCCAAAAAACTCAAAATGGCTTCAAGAAAATCTTA
CAGATATGGATTCCAAAGTCAAACAGATGATCAAACTCATCGAAGAAGATGCAGATTCCTTTGCAAGGAGGGCAGAGATGTACTACAAGAAACGCCCAGA
GCTTATGAAATTGGTCGAAGAGTTTTATAGAGCGTATCGTGCCTTGGCTGAAAGATATGATCATGCCACCGGGGCCCTTCACCAGGCGCAACGAACAATG
GCAGAAGCATTTCCCAACCAAGCCCCCTTTATTCTGGGTGATGATTCCCCTGCAGGTTCTGCTACTGACTGTGATCCCCGTACACCTGATATGCCACCAA
TACGTGCACCTTTTGACCCTGATGAGCTGCAAAAGGATGCTTTGGGCGTCTCACCATCCCATGCTATCAATAGGAATGGAGCTTTTACTGAGAAATCAGA
TCCTGGAAGAAAGGGTTTGAAACAATTCAATGATCTTTTTGGGCTTGGAGATGGGATGGACAATGCTAAGTTTGCAGAAGGGAGGGTGAGAAAAGGCCTC
AATTTCCATGACCCAGAGGAGAAAGGACGAGGTGTGCAAAACAATGGCATCCATGATCTCAAGGCTCGAGCCCCATCTGAGTCTGAGCAAGTTAGTAAAG
CTGAGCTAGAAATTTTAAATTTAAAGAATGCACTTGCTAAACTAGAAGCCGAAAAAGAAGCTGGCCTGCTTCAGTATGAGCAAAGTTTGGAAAGATTGTC
TAAACTGGAGTCAGAAGTCTCTCGTGCAACGGAGGATTCCAGGGGACTTAATGAACGAGCTAGCAAAGCTGAAGCTGAAGTTCAAACTTTGAAGGAAGTC
CTTGCACAATTAGAGGCTGAAAAGGAATCTAGTTTTCTTCAATACCAGGGGTGTCTGGAAAAGATATCTAATCTGGAGAACAATCTCTCTCTTGTCCAAA
AGGATGCAGGAGAACTAAATGAGCGAGCCAGCAAAGCTGAAACTGAAGCTCGATCCCTAAAGCAAGACCTGTCTAGATTAGAAGCTGAAAAAATTGATGC
ACAGGTTCAGTACAGCCAATGTTTGGAAAAGATATCTGATCTAGAGGACAAATTACATAATGCACAGGAAGATGCCAAGAGGTTCAGTGAGCGTGCAGAT
GATGCTGAAAGGGAAATTGAAGCCTTGAAGCATGCTTTGACCAGGCTAACTGAAGAAAAGGAAGCTGCTGTCACTCAGTACCAGCAGTGCTTGGCAACAA
TTGTCAGTCTGGAGCATAAAATTGCTTGTTTTGAGGAGGAAGCCCGGAGGCTTAACTTGGTGATAGATAATGGGACTGTGAAGTTAAAGAGTTCTGAAGA
GAGGTGTCTTCTGTTAGAAAAATCAAACCAAACCATACACTCAGAGTTAGAGTCAGTGATGCAGAAAGTGGCGGCTCAAAGCAATGAGCTTACGGAAAAG
CAGAAGGAGTTGGGGAGACTTTGGGCTTGCGTCCAAGAAGAGCACTTGAGATTCATGGAGGCCGAAACTGCTTTTCAAACTCTACAGCATCTGCACTCTC
AATCTCAGGAAGAATTGAGATCTGTGGTGGCTCAGCTTCAGAACAGGGCTCAAATTTTGGAGGACCTGGAAGCTCGTAATCAGAGTTTAAAAGATGAAAT
GGAGCATGTCAATGTGGAGAACAAGAGCCTTAGTGACGTCAACTTATCTTCAGCTCTGACTATACAGAATCTGCAAGATGAGATTTCAAGCTTAAGGGAG
ACCATAAAGAAACTTGAAGCAGAGGTGGAGCTTCGAGTGGACCAAAGAAATGCTCTTCAGCAAGAGATTTACTGTCTAAAGGAGGAGCTAAATGAACTTA
ACCAGAAGCATCAGGCAATCATGAGGCAGGTGGAATCAGTTGGCTTCAGTCCAGAGTCCTTTGGATCATCTGTGAAGGATTTGAAGGATGTCAACATCAA
GCTGAAGGAGGTTTGTGAGAGAGACAGAACTGAAAAGGTAGCTCTTTTGGAAAAGTTGGAGAACATGGAGAAACTTATTGATAAAAATGCTCTTCTGGAG
AATTCTTTATCAGATTTGAATGTTGAGCTAGAAGGGGTCGGAGAGAAGTTAAAGGCACTAGAAGAATCCTGTCAATATCTTGTGGAAGAGAAATCCGTTC
TTGTTTCTGAGAAGGATTTGATGGCTTCTGAGTTGCAATTTGCTACTGATGATTTGGAGAAACTTACAGAGAAGAACCACATTCTGGAGAATTTCCTCCT
TGATGCAAATGCTGAACTTGAAGGGTTGAGGGAAAAATCAAAGAGCTTAGAAGATTTTTGCCTGCTGCTTGTGAATGAGAAGTCTGAGCTGGCCTCCATG
AAAGGAAGTTTATCTTCTCAGTTGGACATCAGTGAGAAAAGCTTGCAGGATTTGGAGAAGAATTATACAGAATTAGAAGAAAAATATTCCCATCTGGAGA
AGGAGAGACAATCCTCACTTCATGAAGTACAAGAATTACAGGTTCGTTTAGATGCTGAAAAGCAAGAACATGCTAATCTAGCCCAGTTGAGTGAGTCCCA
ATTGGCTGGTATGGCATCACAGATTTGTTTGCTACAAGAAGAAAGTCTGTGCAGAAAGAAAGAATATGAAAAGGAGCTGGACAAAGCTGTGAATGCAGAG
ATTGAGATCTTTATCTTGCAGAAATGTGCGCAAGAATTGGAAGAGAAGAATTCTTCCCTCTTGCTTGATCATCAGAAGCTCGTGGAGGCATCTAAACTGT
CAGAGAAACTGATCTCTGATATGAGACATGAAAATTGTGAACAACAAGAAGAGGTGAAATGCTTATCTGATAAAATTAAAACACTGAGGATGGGACTTTA
TCAGGTGTTGATGACTCTTGAACTTGATGCGAACCAGTGTGAAAATAAACCCAAGCAAGACCAAAAACTGCTGAACCATGTACTCAACAGGCTTCAAGAA
TCACAGGAGTTTCTCTTCAAGACACAAGATGAAAATCAGCGGTTGTTCACTGAGAACTCTGTTCTAGTTACTCTGCTTAGGCAACTGCAATTAGAGGTGG
AAAATCTTGTGAAGACTAAAAATATCCTCGATCAAGAATTGACAACCAGGTCTGAGCAATTCTTGGTTTTGCAGAATGAGAGCCAAGAGCTTTCAGGGAT
AAACGAAGAGATGAAATTGAAGTTAATAGAGGGAGATCGCAAAGAGGAGGCTTTGAAGGTTGAACTAAATAATCTCCATGTACAGCTGTCAGACTTGCAA
GGTGCTTTCCAGAACTTACAAGAGGAGAACTGCAAGGTTCTTGATGATCAGAGGTCCTTGATGAAATCATTTTCAGACCTGCAGATGGAGAAATGTGAAC
TGGAAGAGGAAAACTTCTGCATTCTTGTTGAAACTGTATCTCAAAGTACCCTTTCTCTAATTTTCAGGGATATCATCTGTGAAAAATCTGTGGAAATAAA
AAGCCTTGGTGTAAGCCTAGATAAACAGTGTCATGACAATAATGGTCTCAACGAGAAGGTGAAGACACTGGAGAAAGAGTTAGATAACTTCAGTGGCTTA
GAAGATGATAAGAGAGAGTTGCATAAAATGGTGGAGGATCTGAAGTGCAAGTATGATGAGGTTGAGGTGATACGATCAGATCAAGAAATGCAGATCATTA
AACTATTAGGAGATTATGATCAGAAAATTAAGGAGGCTGAAAACATTCGTGAAGTAAATCAGAAATTGGAGTCTGAAATTAGGAAATTGCATGAAGAATT
TCAAGAAGTTAAAGACAGGAAGGAAAATTTGAGTCATGAACTGGTCAAGGAAAGAAATGAGGTTGAACTACAAGAGTCTCAGGCTGTTGCATTGTTTGGT
GAGCTGCAGATATCTGCTGTCCGAGAAGCCTTGTTTGAAGGAAAGCTTCGCGAGCTCCTTAAAATATGTGAGAGCCTTGAAGATGGAAATTGCTCAAAAG
ACATGGAGATTGACCAGCTGAAAGAAAGAGTTAGCACTTTGGAAGGCGGAAATGCAGAACTAAAAGCTCTTGTGGCTGCATATTTGCCAGCTTTCATGTC
GTTGAGGGATTGTGTAACATCACTGGAGAAGCACACTCTTCCAGATGCGACACTTCATGAAGGTGACAGCAAGGAATCAAAGGATGCTGCATTGGTGGTG
CATGCCAAAGGCTTTCACCAAATGAGTGAAGGACAGAGTGGCATGGTGCCAGGTGGAACCTTGGACTTCCAGGATTTGCAAATGAGGATTAGAGCTATTG
AGAAAGAAATCATTGAGAAGGAGAGACTTGTTATGCTAGAAAATTTGAGTTATCATTCCAAACTCGATGCTGCAATAAGGCAGATTGAGGACTTGAAATC
TGGAAGCAGTGCACGTCAAAAAGGTGTCGAGACAAGGAGGTATGTTAAGCCAAAACCGGAGGATGGGGAACTGGGGGCCACACCAAGTGATGATCTGAGG
CGGCAGAAACGAACACATGAAATCTCAGAGGATGGGAATGAAGTGATGACAAAAGACATAATACTTGATCAGATATCAGAATGTTCATCCCATGGAATCA
GCAGGAGAGAAACTATGCAGGCTGATGAACAGATGCTTGAAATATGGGAAACTGCTGATCGGGATGACAGCATTGACCTGACTGTTGGAAAAACGCAGAA
GGTGACTGCTTCACAGAAGAAGAAAAAACACATTAGGCAGCATCCTTCTGCAGAATCAATGGTTGAGAAGGAGGTGGGTGTGGACAAATTAGAGATCTCA
AAAAGATTATCAGGGTCTCGTCAAGAAGGGAATGAGAGGAAAATTCTAGAAAGACTTGATTCTGATGCTCAAAAGTTGACAAATCTTCAAATAACAGTTC
AAGATTTGATGAGCAAGGTGGAGATTACAGAGAAGAGCGAGAAGGGAAAAGGTATTGAATATGATAATGTGAAGGAGCAGCTGGAAGAATCCGAGGAGGC
CATCATGAAGTTGTTTGAAGTGAATCGCAAACTAATGAAGACTGTTGAAGATGAGCCACTGTACTTTGACGAGAAACCTGAATTAGCACCAGATGAGAGT
GGCAGTGTCAGGAGAAGAAAGATTACAGAGCAGGCAAGAAGAGTGTCAGAGAAAATCGGGCGTTTGCAGTTGGAGGTGCAGAAATTGCAGTTCGTTTTGC
TGAAACTTGATGATGAAAACAGAAGTAGAGGGAAAACAAAAATCACAGAGCAAAAAACAAAAGTTCTACTGCAGGACTATCTGTATGGCAGCACAAGAAC
TCGCCAGAAGAGGAAGAAAGGGCACTTCTGTTCATGCGTGCAACCTCCAACTAAAGGAGATTGA
AA sequence
>Potri.002G049600.1 pacid=42779933 polypeptide=Potri.002G049600.1.p locus=Potri.002G049600 ID=Potri.002G049600.1.v4.1 annot-version=v4.1
MAARSQADSKRKYSWWWDSHISPKNSKWLQENLTDMDSKVKQMIKLIEEDADSFARRAEMYYKKRPELMKLVEEFYRAYRALAERYDHATGALHQAQRTM
AEAFPNQAPFILGDDSPAGSATDCDPRTPDMPPIRAPFDPDELQKDALGVSPSHAINRNGAFTEKSDPGRKGLKQFNDLFGLGDGMDNAKFAEGRVRKGL
NFHDPEEKGRGVQNNGIHDLKARAPSESEQVSKAELEILNLKNALAKLEAEKEAGLLQYEQSLERLSKLESEVSRATEDSRGLNERASKAEAEVQTLKEV
LAQLEAEKESSFLQYQGCLEKISNLENNLSLVQKDAGELNERASKAETEARSLKQDLSRLEAEKIDAQVQYSQCLEKISDLEDKLHNAQEDAKRFSERAD
DAEREIEALKHALTRLTEEKEAAVTQYQQCLATIVSLEHKIACFEEEARRLNLVIDNGTVKLKSSEERCLLLEKSNQTIHSELESVMQKVAAQSNELTEK
QKELGRLWACVQEEHLRFMEAETAFQTLQHLHSQSQEELRSVVAQLQNRAQILEDLEARNQSLKDEMEHVNVENKSLSDVNLSSALTIQNLQDEISSLRE
TIKKLEAEVELRVDQRNALQQEIYCLKEELNELNQKHQAIMRQVESVGFSPESFGSSVKDLKDVNIKLKEVCERDRTEKVALLEKLENMEKLIDKNALLE
NSLSDLNVELEGVGEKLKALEESCQYLVEEKSVLVSEKDLMASELQFATDDLEKLTEKNHILENFLLDANAELEGLREKSKSLEDFCLLLVNEKSELASM
KGSLSSQLDISEKSLQDLEKNYTELEEKYSHLEKERQSSLHEVQELQVRLDAEKQEHANLAQLSESQLAGMASQICLLQEESLCRKKEYEKELDKAVNAE
IEIFILQKCAQELEEKNSSLLLDHQKLVEASKLSEKLISDMRHENCEQQEEVKCLSDKIKTLRMGLYQVLMTLELDANQCENKPKQDQKLLNHVLNRLQE
SQEFLFKTQDENQRLFTENSVLVTLLRQLQLEVENLVKTKNILDQELTTRSEQFLVLQNESQELSGINEEMKLKLIEGDRKEEALKVELNNLHVQLSDLQ
GAFQNLQEENCKVLDDQRSLMKSFSDLQMEKCELEEENFCILVETVSQSTLSLIFRDIICEKSVEIKSLGVSLDKQCHDNNGLNEKVKTLEKELDNFSGL
EDDKRELHKMVEDLKCKYDEVEVIRSDQEMQIIKLLGDYDQKIKEAENIREVNQKLESEIRKLHEEFQEVKDRKENLSHELVKERNEVELQESQAVALFG
ELQISAVREALFEGKLRELLKICESLEDGNCSKDMEIDQLKERVSTLEGGNAELKALVAAYLPAFMSLRDCVTSLEKHTLPDATLHEGDSKESKDAALVV
HAKGFHQMSEGQSGMVPGGTLDFQDLQMRIRAIEKEIIEKERLVMLENLSYHSKLDAAIRQIEDLKSGSSARQKGVETRRYVKPKPEDGELGATPSDDLR
RQKRTHEISEDGNEVMTKDIILDQISECSSHGISRRETMQADEQMLEIWETADRDDSIDLTVGKTQKVTASQKKKKHIRQHPSAESMVEKEVGVDKLEIS
KRLSGSRQEGNERKILERLDSDAQKLTNLQITVQDLMSKVEITEKSEKGKGIEYDNVKEQLEESEEAIMKLFEVNRKLMKTVEDEPLYFDEKPELAPDES
GSVRRRKITEQARRVSEKIGRLQLEVQKLQFVLLKLDDENRSRGKTKITEQKTKVLLQDYLYGSTRTRQKRKKGHFCSCVQPPTKGD

DESeq2's median of ratios [POPLAR]

Mapped by: Order by: Show schematic diagram

Coexpressed genes

Only top 10 genes are shown Show allDownload tab-delimited text
Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.
At best At TF class At alias At description Locus MR r Symbol NWA:WTNWB:WTNWA:OE-ARK2NWB:OE-ARK2NWA:miRNA-ARK2NWB:miRNA-ARK2NW 0hrWT H20WT-NWTUA1dEY NWTUA1dEY+TUB15 NWTUA1dY+TUB9 NWPde NWNWA:WT GANWBWT GATW:WTTW:WT GANWA:OE-ARK2 GANWB:OE-ARK2 GATW:OE-ARK2TW:OE-ARK2 GANWA:miRNA-ARK2 GANWB:miRNA-ARK2 GATW:miRNA-ARK2TW:miRNA-ARK2 GATW 2hrTW 8hrTW 24hrTW 48hrTW 96hrTW 336hrWT ACC35S::etr1-1 H2035S::etr1-1 ACCLMX5::etr1-1 H20LMX5::etr1-1 ACCWT-TWTUA1dEY TWTUA1dEY+TUB15 TWTUA1dY+TUB9 TWPde TWOW:WTOW:WT GAOW:OE-ARK2OW:OE-ARK2 GAOW:miRNA-ARK2OW:miRNA-ARK2 GAOW 2hrOW 8hrOW 24hrOW 48hrOW 96hrOW 336hrRoot CTRRoot LongColdRoot LongDrougtRoot LongHeatRoot LongSaltRoot ShortColdRoot ShortDrougtRoot ShortHeatRoot ShortSaltPtr rootLeaf CTRLeaf LongColdLeaf LongDrougtLeaf LongHeatLeaf LongSaltLeaf ShortColdLeaf ShortDrougtLeaf ShortHeatLeaf ShortSaltPtr leafStem CTRStem LongColdStem LongDrougtStem LongHeatStem LongSaltStem ShortColdStem ShortDrougtStem ShortHeatStem ShortSaltPtr shootPtr xylemPtr phloemPtr fiberPtr vesselPtr fiber vessel ray
AT1G03080 kinase interacting (KIP1-like)... Potri.002G049600 0 1
AT3G12810 CHR13, SRCAP, P... PHOTOPERIOD-INDEPENDENT EARLY ... Potri.003G022100 6.00 0.8260 CHR928,PIE1.4
AT3G09670 Tudor/PWWP/MBT superfamily pro... Potri.010G216900 6.16 0.7928
AT3G57910 D111/G-patch domain-containing... Potri.016G048600 8.48 0.7477
AT1G15340 MBD10 methyl-CPG-binding domain 10 (... Potri.001G192300 10.24 0.7264
AT1G65440 GTB1 global transcription factor gr... Potri.016G029200 13.19 0.7927
AT2G16485 nucleic acid binding;zinc ion ... Potri.007G016000 13.67 0.7391
AT5G04290 SPT5L, KTF1 SPT5-LIKE, kow domain-containi... Potri.008G032800 14.96 0.7860
AT1G28420 HD HB-1 homeobox-1 (.1) Potri.004G048675 18.33 0.7494
AT1G10320 C3HZnF Zinc finger C-x8-C-x5-C-x3-H t... Potri.004G228600 21.21 0.7786
AT5G16780 MDF, DOT2 MERISTEM-DEFECTIVE, DEFECTIVEL... Potri.001G082100 27.60 0.7540

Potri.002G049600 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.