Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol	NADK2.2
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G21640 1192 / 0 ATNADK2, NADK2, ATNADK-2 NAD kinase 2 (.1.2) AT3G21070 247 / 2e-71 NADK1, ATNADK-1 NAD kinase 1 (.1.2)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.005G182600 [exp] 1609 / 0 AT1G21640 699 / 0.0 NAD kinase 2 (.1.2) Potri.001G256100 [exp] 244 / 4e-70 AT3G21070 774 / 0.0 NAD kinase 1 (.1.2) Potri.009G051500 [exp] 241 / 5e-69 AT3G21070 754 / 0.0 NAD kinase 1 (.1.2)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10000856 [exp] 1219 / 0 AT1G21640 1205 / 0.0 NAD kinase 2 (.1.2) Lus10029717 [exp] 1191 / 0 AT1G21640 1154 / 0.0 NAD kinase 2 (.1.2) Lus10028677 [exp] 1116 / 0 AT1G21640 1112 / 0.0 NAD kinase 2 (.1.2) Lus10003178 [exp] 248 / 3e-71 AT3G21070 768 / 0.0 NAD kinase 1 (.1.2) Lus10009958 [exp] 207 / 3e-57 AT3G21070 700 / 0.0 NAD kinase 1 (.1.2)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0240 [poplar] [flax] PFK PF01513 [poplar] [flax] NAD_kinase ATP-NAD kinase
Representative CDS sequence Show only first row Show all	>Potri.002G078700.1 pacid=42777939 polypeptide=Potri.002G078700.1.p locus=Potri.002G078700 ID=Potri.002G078700.1.v4.1 annot-version=v4.1 ATGGTGCTATGTCTCTTCCATGTGCCTGTCATCATGAATAGGTTATCTCCGGTCACCGGAATATTATCGTCATGCTCGTGCTCCTTCAAGCTCAATAACA GAGACACCAAACTGGTGGGTTTTGGGTTTGAGTTGCAAAGAAAGGAGAGGTTAAAGAGGAAGCTTAAGTTTGTCGTCAGCGCGGAGTTATCCAAGTCTTT CTCTGTGAACTTGGGTTTGGACTCTAAGAACATCAGCCAGTCTCATGATCTATCACAGTTGCCTTGGATTGGTCCAGTTCCTGGGGACATTGCAGAAGTC GAGGCTTATTGTAGAATATTTAGAGCAGCTGAACGGCTTCATGCTGCATTGATGGATACATTATGCAATCCATTGACTGGGGAGTGTAAAATTTCTTATG ATTTTCCGTCAGAGGAAAAGCCATTATTGGAAGATAAAATAGTACCCGTGCTTGGCTGCATCCTATCGCTTTTGAACAAAGGAAGAGAAGATGTTCTTTC TGGAAGATCTTCCATCATGAATTCCTTTCGGGTTGCAGAAGTAAGTGCGATGGAGGGTAAACTCCCACCGCTAGCCATTTTCAGGAGTGAGATGAAAAGG TGTTGTGAGAGTTTGCATGTTGCTCTTGAAAACTTTTTGACACCTGACGATGATCGAAGCCTGGATGTATGGAGGAAACTGCAGAGGCTGAAGAATGTAT GCTATGATTCTGGGTTCCACCGTCGTGATGATTATCCTTGTCATATGCTGTTTGCAAATTGGAATGCTGTTTATTTCTCCACTTCTAGAGAAGACATAAT CTCCAAAAATTCCGAGTTTGCATTTTGGATGGGTGGGCAGGTAACGGAGGAAGGTTTAAATTGGTTGCTGGAGAGAGGATTCAAGACCATTGTAGATCTT AGAGCAGAAATTATTAAGGATAACTTCTACAAAGCCGCGGTAGATGATGCTATTGCGGCTGGGAAAGTAGAACTGATTAAAATTGCTGTTGAAGATGGGA CAGCTCCTTCAATGGAGCAGGTTGAAAAGTTTGCATCTTTGGTTTCAGATAGCAGCAAAAAGCCCATATATCTCCACAGCAAGGAAGGAGTACGGAGAAC TTCCGCTATGGTCTCCAGATGGAGGCAGTATATGACTCGCAGTGCATCTCTGATCACCACTCCGAGAGACAAGGGACTACAAGATAAAAATGAAAAGGGA GGAAGGCAGGGACCTTCCCTCATTGGAGGGGGGTCCCACCCCAGACAGGAAAATGGATCTCTGTCGGAGACTTTGAATAAACGTCACAGTTCAAATGGAT TATCTAATGGAGCTGTCTCTCCAAAGGATGAAAATGGTCAGAGCATTAATGAGACATACAATGTCCATGCCTCTGTTCAAGATTCTATTCCATTAGAAAC GGTAGAAAACAAGGTAGGATCTGTTGCAAACATATCCATGGAAGCTGACCCTCTGAAGGCTCAGGTTCCTCCTTGCAATTTCTTTTCCAAAGCAGAGATG TCCAAATTTTTCAGAAGTAAAAAATTCAAACCTCCAGCATACTCTAATTATCAGTTGAAAGGGTTTGAAAAGTTGCATGTTTCTAGAACGGCAAGTGTTG GGACATTCCAGAAAGTTGATGGTACTGATCCTGAGTCAAGGTTCGTGGAGGCAAAAAGATCCAATGGATTGGTCAGTGGTAAAATGGCATCTTCAAAGCC TCAGAGCTCACCTGCTGACAGTGACAAGCATCTGAATGGCAGCAGTGATGCTTCTGTTGGTTCAGGCATGGGTGTATTTAGTGGAGGGGAGAGGCGTTTC ATGACTGGAAACAATGTCTCTACCACTGTGGTTGAGAATTTAACTGAGCATCTAGCATGCGCATCAATCAAGGATGGTGGTGAAAACAATGGTGTTGCTT ACTTATCCTCCAGTGATGATGACTTGTGCACAATTGAAGGAAACATGTGTGCTTCTGCAACTGGTGTTGTAAGGGTGCAGTCAAGAAGGAAAGCAGAGAT GTTTCTTGTGCGGACAGATGGATTCTCCTGCACCAGAGAGCAGGTTACAGAATCTTCCCTGGCCTTCACTCATCCTAGCACCCAGCAACAGATGCTTATG TGGAAATCCATGCCAAAGACAGTACTATTGTTGAAGAAGCTGGGGCAAGAACTCTTGGAAGAAGCAAAAGAGGTTGCCTCCTTCTTGTACCACCAAGAGA AAATGAATGTTCTTGTTGAACCGGACGTTCATGACATATTTGCTAGAATTCCAGGGTTTGGATTTGTTCAGACCTTTTATAGTCAAGATACCAGTGATCT TCATGAGATGGTTGATTTCGTGGCTTGCTTGGGAGGAGATGGGGTTATATTACACGCATCGAATTTATTTCGAGGGGCGTTTCCACCTGTTGTGTCCTTT AATCTTGGATCTCTTGGATTTCTGACTTCCCATTATTTTGAAGACTACAGGCAGGACTTGAGACAAGTTATCCATGGGAATAACACCTTGGACGGTGTTT ATATAACTCTTAGAATGCGCCTTCGGTGCGAAATCTTTCGCAATGGTAAAGCAGTGCCCGGGAAAGTTTTTGATGTCTTAAATGAGGTGGTTGTTGATCG GGGTTCTAATCCATATCTTTCCAAGATTGAATGCTATGAGCATGACCGACTTATAACCAAGGTGCAAGGTGATGGAGTCATAGTGGCTACACCTACAGGA AGTACTGCTTATTCCACATCTGCTGGAGGTTCCATGGTGCATCCAAATGTTCCTTGCATGCTGTTTACCCCTATCTGCCCGCATTCTCTCTCATTTAGGC CAGTCATACTTCCAGATTCTGCGAGACTTGAATTAAAGATTCCAGAGGATGCTCGAAGTAATGCATGGGTTTCTTTTGATGGGAAGAGGAGGCAGCAGCT CTCAAGAGGGGATTCAGTCCGGATATCTATGAGCCAGCACCCACTTCCAACAGTCAACAAATCTGATCAAACAGGCGATTGGTTTCACAGCTTGGTCCGC TGCCTAAACTGGAACGAGAGGCTAGATCAGAAGGCCCTTTGA
AA sequence Show only first row Show all	>Potri.002G078700.1 pacid=42777939 polypeptide=Potri.002G078700.1.p locus=Potri.002G078700 ID=Potri.002G078700.1.v4.1 annot-version=v4.1 MVLCLFHVPVIMNRLSPVTGILSSCSCSFKLNNRDTKLVGFGFELQRKERLKRKLKFVVSAELSKSFSVNLGLDSKNISQSHDLSQLPWIGPVPGDIAEV EAYCRIFRAAERLHAALMDTLCNPLTGECKISYDFPSEEKPLLEDKIVPVLGCILSLLNKGREDVLSGRSSIMNSFRVAEVSAMEGKLPPLAIFRSEMKR CCESLHVALENFLTPDDDRSLDVWRKLQRLKNVCYDSGFHRRDDYPCHMLFANWNAVYFSTSREDIISKNSEFAFWMGGQVTEEGLNWLLERGFKTIVDL RAEIIKDNFYKAAVDDAIAAGKVELIKIAVEDGTAPSMEQVEKFASLVSDSSKKPIYLHSKEGVRRTSAMVSRWRQYMTRSASLITTPRDKGLQDKNEKG GRQGPSLIGGGSHPRQENGSLSETLNKRHSSNGLSNGAVSPKDENGQSINETYNVHASVQDSIPLETVENKVGSVANISMEADPLKAQVPPCNFFSKAEM SKFFRSKKFKPPAYSNYQLKGFEKLHVSRTASVGTFQKVDGTDPESRFVEAKRSNGLVSGKMASSKPQSSPADSDKHLNGSSDASVGSGMGVFSGGERRF MTGNNVSTTVVENLTEHLACASIKDGGENNGVAYLSSSDDDLCTIEGNMCASATGVVRVQSRRKAEMFLVRTDGFSCTREQVTESSLAFTHPSTQQQMLM WKSMPKTVLLLKKLGQELLEEAKEVASFLYHQEKMNVLVEPDVHDIFARIPGFGFVQTFYSQDTSDLHEMVDFVACLGGDGVILHASNLFRGAFPPVVSF NLGSLGFLTSHYFEDYRQDLRQVIHGNNTLDGVYITLRMRLRCEIFRNGKAVPGKVFDVLNEVVVDRGSNPYLSKIECYEHDRLITKVQGDGVIVATPTG STAYSTSAGGSMVHPNVPCMLFTPICPHSLSFRPVILPDSARLELKIPEDARSNAWVSFDGKRRQQLSRGDSVRISMSQHPLPTVNKSDQTGDWFHSLVR CLNWNERLDQKAL

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT1G21640		ATNADK2, NADK2,...	NAD kinase 2 (.1.2)		Potri.002G078700 [exp]	0	1	NADK2.2
AT5G50920		CLPC1, CLPC, AT...	HEAT SHOCK PROTEIN 93-V, DE-RE...		Potri.015G105100 [exp]	2.44	0.9704	Pt-CLPC.2
AT2G04842		EMB2761	EMBRYO DEFECTIVE 2761, threony...		Potri.014G162200 [exp]	2.64	0.9746
AT4G25450		ABCB28, ATNAP8	ARABIDOPSIS THALIANA NON-INTRI...		Potri.015G136700 [exp]	6.24	0.9502	Pt-NAP8.1
AT3G19170		ATPREP1, ATZNMP	presequence protease 1 (.1.2)		Potri.004G142300 [exp]	7.07	0.9605
AT3G05350			Metallopeptidase M24 family pr...		Potri.013G021400 [exp]	7.74	0.9667
AT5G08650			Small GTP-binding protein (.1)		Potri.001G305300 [exp]	8.24	0.9660
AT1G54350		ABCD2	ATP-binding cassette D2, ABC t...		Potri.010G176400 [exp]	8.48	0.9566
AT3G06980			DEA(D/H)-box RNA helicase fami...		Potri.010G004700 [exp]	9.16	0.9604
AT5G42390		SPP	stromal processing peptidase, ...		Potri.014G149200 [exp]	10.00	0.9460
AT3G21070		NADK1, ATNADK-1	NAD kinase 1 (.1.2)		Potri.001G256100 [exp]	11.83	0.9398

Compare expression of checked genes

Potri.002G078700 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.