Potri.002G091700 [POPLAR]

| External link |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Symbol | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
Arabidopsis homologues
|
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
Paralogs
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
Flax homologues |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
| PFAM info | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
Representative CDS sequence |
>Potri.002G091700.2 pacid=42780082 polypeptide=Potri.002G091700.2.p locus=Potri.002G091700 ID=Potri.002G091700.2.v4.1 annot-version=v4.1
ATGTCGAGGATTACCAAGTGGGAGCTCGAGAAGACTAAAGTGAAAGTTGTCTTTCGGCTGCAGTTCCATGCTACACAGATTCCTCAATCAGGATGGGATA
AGCTTTTTATATCTTTCATTCCTGCTGATTCTGGAAAAGCAACTGGAAAAACAACCAAAGCTAATGTAAGAAACGGGACCTGCAAATGGGCAGATCCTAT
CTACGAGACCACAAGACTTCTCCAAGATGTTAAAACCAAGCAATACGATGAAAAGCTCTATAAGCTTGTTATATCAATGGGTTCATCACGGTCTAGTGTC
CTTGGGGAGGCTACCATCAACCTTGCTGATTATGCTGATGCATTAAAACCATCTGTTGTTGCCCTGCCTCTTCATGGATCTGATTCTGGAACTTCTTTGC
ATGTCACTGTACAGCTGCTCACTTCAAAAACTGGTTTCCGGGAGTTTGAGCAGCAGAGGGAACACAGAGAAAGGGGATTGCAGACTAACCAAAATAGTCC
CAATGAATCCTCTGGTGGAAAAGTATCATCTTCTGAAGAGATTAACAATGATCAGATAGATAAGGTAAATATCAGAGTTAGATTTAAAGACAAATCTAAA
GACCTTGCTTCACTCAAACAAGAGGTGGGGTCAAACGAAGAATATGCAGACTCAGCTGTTGGCTTTGATGGCTCTTCCAATACTTCAGAGAGTTTATATG
CAGAGAAGCATGATACTTCCAGTACACATGAAATTGATCGCCTTAAGAGCACTGTCTCTGGTGACTTAGCTGGACTTTCCCTTAGCCAGGGTCCTCAGCT
GGAGAAAGGGGATCTTTCTGATCATCAATTTTCAGCACAGGGAACGAATGATTGGGTTCATGCCTGGAGTTCAGACTACCATGCAGATAATGACTTGGCA
GCTGCATATGAAGTGAATGGTAGACTTAGAGGAAGCTTGGAAGTGGCGGAGTCATCTATTCTTGAGCTTAGACAGGAGGTAAGCTCCTTACAGGGTCATG
CTGATGAAATAGGTTATGAAGCCCAAAAATTTGCCAAGCAACTTGCTTCTGAGATTGCTTCTGGAGAAGAGATGACCAAAGAGGTGTCCATGTTGAAGTT
GGAGTGTTCAAAGTTGAAAAATGAACTTGAACAGCTAAAGGTTTCTCAGTTATCCCCTCCATTTAGCAGCAGAAATGCTACAGAGCCCAGGCAGGATCAC
AGATTTCAAGATCTGCAGCTCAGATGGCTAAATGGGCTTTTACCCATGGAAGATAAGATAAAAGAGCTTAAAAATAAGGCATGCTTGGGATACCATGAAA
GCGATTCCAGTTTTCTTTGTTCAGACATAGAGGAGTTGCTCAGTGTGCTGCAGAATCTCAAGCAGGCAACAGGGCTGCCAATTTCCAGCACCCACTTGGT
ACCTTCTGAAGGATCTAGCCTGAAGGAGATCCGAGAAATGAGTGTACATAAAAATGGCCAGTTTGTAAGTGAATCAGGGTTTGATGTTGACTCGTATCAA
CCAGAACTAGGCATGCTTCATTGTCTTAATATTCCTGGACTGGTGTCTCATGAGACTGACTCTATAAATACTACCAACGCAATGAATGGAAGAATATTTG
AACTTCTGAGGGAGTTGGATGAATCAAAAGCTGAACGAGAGAGCCTTGTGAAGAAAATGGACCAGATGGAGTGTTACTATGAAGCTCTTGTCCAGGAGCT
TGAGGAAAATCAGAGGCAGATGCTGGGGGAGTTGCAGAATCTCAGAAATGAGCATGCTACTTGCTTGTATACAGTTTCATCCACAAAGGCAGAGATGGAG
ACAATGCGCCTAGATCTGAATGACCAGCTATCAAGACTTGTCGAAGACAAACGTGATTTGGATTCTCTGAACAAGGAGCTTGAAAGAAGGGCTGTTACTG
CAGAGGCAGCGCTCAGAAGGGCACGGCTGAATTATTCTATTGCTGTTGACCAGTTACAAAGGGACTTGGAACTGCTCTCAGTCCAGGTTTTGTCTATGTT
TGAAACTAATGAGAACCTCATCCGGCAAGCTTTTGTAGATTCTTCACAATCAGGCTTCGAAGGAAACCCAGTAACCACGGAGAGCCAGAGATCTGATTCA
AGGGAAGTTCATATGGGGAAGCTCTTTCAGTTCCAAAATCAGTTTGTTGGGACAAAGAAACAGCAGTTGGGTTGTGATATTCTTTTAGATGACTTAAAAA
GATCACTACATTTGCAGGAAGGGCTTTACAGGAAGGTTGAAGAAGAAGCTTGTGAAATGCATTTTGCAAATCTATACTTAGATGTACTTTCAAAGGCTCT
ACAAGAAACTTTGCTTGAAGCCAGTGATGATGTCAAATGTATGAAAGAGAAAATACATGAACTTGTGTGGCAGCTAGAGCTTTCAACCGAGTCGAAGGGG
TTATTATCACAAAAGCTGCACTCTGCATTGGATGATGTTCATGCCTTAAAAGAGCATAGGGCTACTTGCATTGCCAAGTGCAATGAGATGGCTCAACGAA
ACCAAGTTTTGGAAACAAATTTGCAAAATGTCACCAGCAAAAATCACCTTCTCTTGCAGAAGATTGCCGAATGGGAGTCTCAAGTGATGCACTACAGAAG
TTATGAGAGCATGTATGAGATTTGTGCTGCAGAGAAAACAGAGTTGGCATGTTTATTGGAGAAAAAAACCCTAGAAAATTGTGGTCTTCAAAATGAGATC
TTTTCTTTGCAGGAAAAGTTGAAAACTTTCAGAAGTGAATTTGATGATCTGGCTTCTGTGAAGGAAAAACTGCAGGATTTAGTCAATTTCATGGAGAGTA
AGTTGCAGAACTTGCTGGCATCCTATGACAAAAGTATCAATGGAATTCCTTCTAGTGAATCTGGCTATCAGGATTTAGAGTCCATGGATTTAACTGGTGT
CATGATGCAATTGGAAGAGCTTCAGCATAATTCTTGCGATAAGATTCTCCAGCTCAGGGAAGAGAAGAAAGGTCTGGTTCATGAGAGAGATATTGCACAA
GTGTCCATTGCTGCAGCTAAATCAGAGCTTGCATTGTTGAAACAGAAGTTTGAATGTGATATGAGGAACATGGTGGATGAATTAGATGTGTCGAATGCTT
TGGTGCAGAAGCTTCAGTTGGACATTGAGGGTATTGCTTACAAACTCAAGGTTAGCTCTGAAGTCGAAGAAAAATGTGCACAGCAGCACAATGAACTTTT
TTCTGATTTTGATCATTTGGCAGTTCAGTTGAAAGAACTTGTTTCTAAAAACAGGGACCTTGGTCACAAAATCTTGGCATTAGATAGTGTCGCTAGTGAA
CTTGATAAAACTAAGCTGACTGCAGCAGAACTTATGAAAGAAAATCAAGCTTTGATGGCATCTATACGGAATAAAAATGAGGTGTCCTCTAGGATTGCAT
ACGAACTCGAGAGTTTGAAAGGAAGTTTTCGATCTCTGCATGATGAAAACCAATCTTTAATGTTATCTTCTCAAGATAAGGTGGAGTCTGCTCAGCTGGC
TTCAGAGTTGAGCAACTTGAAAGATAGCATCAAAACTCTGCATGATGAAAACCAAGTTCTGATGGAAACTATACGGAATAAAACCGAGGAAGCTGCCAGC
TTTGCATCAGAACTAAATAGTTTGAAAGAAAATTTGCGATTTCTGCACGATGAAAACCGAGCTTTGATAGCATCTTCACAGGATAAAGAGGAGGTCTCTT
CCAAGCTTGCATTGGAGCTAAACAGTTTGAAAGAAAGTTTGCAATCTCTGCATGGTGAAAAACAAGCTTTGATGACATCTTCACAGGATAAAACCGAGGA
AGCTTCCAAACTTGCATCAGAGCTTGACACTTTGAAGGAGAGTTTGCAATCTTTGTGTGATGAAAACCAAGGTTTGATGGCATGTTTGCAGGATAAGACA
GAGGAATCTGCCAAGCTTGCATCGGAGCTAAACAGTTTGAGAGAATGCCTGCAATCTTTGCAAGATGAAAAGCAAGCTTTGATGGTGTCTTTGCAGGATA
AAACTGAGGAGTCTGCCCAACTCGCTTCAGATATGATCAGTTTGAGAGCGAGTTTGCGATCTCTGAATGATGAGCTGCATGATGAGAGAAGCTTGCGAGA
GGGGTTACAGAGTACAGTAACAGATCTAACTTCCCAATTAAATGAGAAGCAGTGCCAGTTGCTCCAATTTGGTCTCCACGAGTCTGAATTGACTCATCTT
AAACACTTGGTGTCGGGTCTAGAATCTGAGAAATCAAGAGTTTGCCAACTGTTGTTGCAGTCAGAGGAATGTGTTAAAAATGCTCATGAAGAAGCTTCCA
CTCTCAAATCTCAGTTGTCTGAGATGCACAAATCTCTAATAGCTGCCGATGTTAAATTCATTTTTGCGAAGACTCAATACGAGGGTGGAGTTGAAGTGCT
TCTTCAGAAACTGAACTCCTCAGATGGACACTTCGCCCAACTTCAGAAGAAGCATATTGACATGGAAATCATCCTTAATCACTGTCATGCAAGTGAAACA
CAACACATTGAAGAGAATGCAAGGCTGATGACAAATGTCAACTCTGTTCAGTCTGAGCTAGAGGCTTCTATTGCTGAAAACAGGTTACTTGTCGAGACAA
AAAGAGCTGAGCTCGAGGGATTCAAAAATAATTCTCAAAATGTTGTGCTTAGTTATATTGAGGATAAAGCTCAGCATTCTAAAGAGTTTGAAAAGCTGAA
GTGCTTGTTGGTGACACCTGAAGAAGAGATTGATAATCTGGTGTTATCTAAGGTTGAGCTGGAAGTAAAATTTCTAGTACTTGAAGCAAAATTGGATGAA
CAGAAAGCTCAGATCATCACCCTTGAAGGATACTATGATGAATTAGTGATGCTGCAGAAGCACTGCAATGAGCTGAACCAGAGGCTTTCTGATCAGATTT
TGAAGACCGAAGAATTCAGAAACTTGTCTATCCATTTGAAAGAGCTCAAAGACAAAGCTGATGCTGAATGTATCCAGGCCCGTGAAAAAAGAGAACCTGA
AGGACCGCCAGTTGCCATGCAAGAGTCCTTGAGAATTGCATTTATCAGAGAGCAGTGCGAAACAAGGCTGCAAGAACAGAAGCAGCAGCTGTCCATCTCC
AAAAAACACAGTGAAGAGATGCTATGGAAATTACAAGATGCCATTGATGAAATTGAGAATAGGAAGAAATCCGAAGCTTCTCATCTGAAGAAAAATGAAG
AACTGGGAATGAGAATCTTGGAATTGGAGGCTGAGTTACAATCTGTACTTTCTGACAAACGTGAAAAAGTGAATGCTTATGACCTGATGAAGGCTGAAAT
GGAATGCTCCTTAATAAGTCTTGAGTGCTGCAAGGAAGAAAAACAAAAACTTGAAGCTGCCTTGGAAGAATGCAACAAGGAGAGGTCAAAAATTGCTGTT
GAACTTGCTTCGATGAAAGAATTGCTAGAGAATTCCAAATCACTAGTGGACATGCAAGCAGAACAAAATGATGGATCTTGCAAAGTGGATTGCTTGTCTT
CTGATGAGTCAGTTATCAGAAATTCCAGCGACAAAAACTCAATCATTGATGCTTCAAGCTATGAAAGAAAAAGAGTACACACGGTCCCTTTGAATGGTCC
AACAGGGGATCCAAACCAGAAGTGTTTGGGAAGGCATAGTTCGAGGAACAGTGAAGAAGCAGAACATGCATTCCCTGCCTCTTTTGACAGAGCTGACCAT
TCAAGCACACTCATGAATGGGCAACCTGAGCAGGATGTTTGTGTATCTGGTGGTGTAAATGGGCTGAAAAGTTCTGCGCTCATAAATCAAGACAGGTTGC
TGCATATTGACATGAAGCATTTAGCTATCATCAATGATCATTTCAGAGCTGAAAGTTTAAAGTCTAGCATGGACCACTTGAGTAATCAGTTAGAAAGGAT
GAAAAACGAGAATTCACTTCTGCTGCAAGATGATAATGATTTTGACCAAAAGTTTCCTGGCTTACAAAGCGAATTTATGAAGCTACAGAAGGCCAATGAA
GAACTAGGAACCATGTTCCCCTTGTTCAATGAATTCTCAGGGTGTGGAAATGCTCTAGAGAGGGTGCTTGCATTAGAAATTGAGCTTGCTGAAGCATTGC
AAGCAAAGAAAAGATCAAGCATCCTCTTCCAGAGTTCTTTCTTGAAACAACACAGTGACGAGGAAGCCATATTCAAAAGCTTTAGAGACATCAATGAGTT
GATTAAGGACATGCTGGAACTAAAGGGAAGGTATACCACTGTGGAGACTGAACTAAAAGAGATGCATGACCGCTATTCTCAGCTAAGCCTTCAATTTGCA
GAGGTTGAAGGTGAGAGACAGAAGCTCATGATGACTCTCAAGAATGCTCGGCATCAAAGAAAGCCCTATACTTAA
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
AA sequence
|
>Potri.002G091700.2 pacid=42780082 polypeptide=Potri.002G091700.2.p locus=Potri.002G091700 ID=Potri.002G091700.2.v4.1 annot-version=v4.1
MSRITKWELEKTKVKVVFRLQFHATQIPQSGWDKLFISFIPADSGKATGKTTKANVRNGTCKWADPIYETTRLLQDVKTKQYDEKLYKLVISMGSSRSSV
LGEATINLADYADALKPSVVALPLHGSDSGTSLHVTVQLLTSKTGFREFEQQREHRERGLQTNQNSPNESSGGKVSSSEEINNDQIDKVNIRVRFKDKSK
DLASLKQEVGSNEEYADSAVGFDGSSNTSESLYAEKHDTSSTHEIDRLKSTVSGDLAGLSLSQGPQLEKGDLSDHQFSAQGTNDWVHAWSSDYHADNDLA
AAYEVNGRLRGSLEVAESSILELRQEVSSLQGHADEIGYEAQKFAKQLASEIASGEEMTKEVSMLKLECSKLKNELEQLKVSQLSPPFSSRNATEPRQDH
RFQDLQLRWLNGLLPMEDKIKELKNKACLGYHESDSSFLCSDIEELLSVLQNLKQATGLPISSTHLVPSEGSSLKEIREMSVHKNGQFVSESGFDVDSYQ
PELGMLHCLNIPGLVSHETDSINTTNAMNGRIFELLRELDESKAERESLVKKMDQMECYYEALVQELEENQRQMLGELQNLRNEHATCLYTVSSTKAEME
TMRLDLNDQLSRLVEDKRDLDSLNKELERRAVTAEAALRRARLNYSIAVDQLQRDLELLSVQVLSMFETNENLIRQAFVDSSQSGFEGNPVTTESQRSDS
REVHMGKLFQFQNQFVGTKKQQLGCDILLDDLKRSLHLQEGLYRKVEEEACEMHFANLYLDVLSKALQETLLEASDDVKCMKEKIHELVWQLELSTESKG
LLSQKLHSALDDVHALKEHRATCIAKCNEMAQRNQVLETNLQNVTSKNHLLLQKIAEWESQVMHYRSYESMYEICAAEKTELACLLEKKTLENCGLQNEI
FSLQEKLKTFRSEFDDLASVKEKLQDLVNFMESKLQNLLASYDKSINGIPSSESGYQDLESMDLTGVMMQLEELQHNSCDKILQLREEKKGLVHERDIAQ
VSIAAAKSELALLKQKFECDMRNMVDELDVSNALVQKLQLDIEGIAYKLKVSSEVEEKCAQQHNELFSDFDHLAVQLKELVSKNRDLGHKILALDSVASE
LDKTKLTAAELMKENQALMASIRNKNEVSSRIAYELESLKGSFRSLHDENQSLMLSSQDKVESAQLASELSNLKDSIKTLHDENQVLMETIRNKTEEAAS
FASELNSLKENLRFLHDENRALIASSQDKEEVSSKLALELNSLKESLQSLHGEKQALMTSSQDKTEEASKLASELDTLKESLQSLCDENQGLMACLQDKT
EESAKLASELNSLRECLQSLQDEKQALMVSLQDKTEESAQLASDMISLRASLRSLNDELHDERSLREGLQSTVTDLTSQLNEKQCQLLQFGLHESELTHL
KHLVSGLESEKSRVCQLLLQSEECVKNAHEEASTLKSQLSEMHKSLIAADVKFIFAKTQYEGGVEVLLQKLNSSDGHFAQLQKKHIDMEIILNHCHASET
QHIEENARLMTNVNSVQSELEASIAENRLLVETKRAELEGFKNNSQNVVLSYIEDKAQHSKEFEKLKCLLVTPEEEIDNLVLSKVELEVKFLVLEAKLDE
QKAQIITLEGYYDELVMLQKHCNELNQRLSDQILKTEEFRNLSIHLKELKDKADAECIQAREKREPEGPPVAMQESLRIAFIREQCETRLQEQKQQLSIS
KKHSEEMLWKLQDAIDEIENRKKSEASHLKKNEELGMRILELEAELQSVLSDKREKVNAYDLMKAEMECSLISLECCKEEKQKLEAALEECNKERSKIAV
ELASMKELLENSKSLVDMQAEQNDGSCKVDCLSSDESVIRNSSDKNSIIDASSYERKRVHTVPLNGPTGDPNQKCLGRHSSRNSEEAEHAFPASFDRADH
SSTLMNGQPEQDVCVSGGVNGLKSSALINQDRLLHIDMKHLAIINDHFRAESLKSSMDHLSNQLERMKNENSLLLQDDNDFDQKFPGLQSEFMKLQKANE
ELGTMFPLFNEFSGCGNALERVLALEIELAEALQAKKRSSILFQSSFLKQHSDEEAIFKSFRDINELIKDMLELKGRYTTVETELKEMHDRYSQLSLQFA
EVEGERQKLMMTLKNARHQRKPYT
|
DESeq2's median of ratios [POPLAR]
Coexpressed genes
Potri.002G091700 coexpression network
*The number of genes in the network is adjusted within 50 genes.*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.