Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol	ACCASE.2
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G36160 3806 / 0 GSD1, PAS3, GK, EMB22, AT-ACC1, ACC1 PASTICCINO 3, GLOSSYHEAD 1, GURKE, EMBRYO DEFECTIVE 22, acetyl-CoA carboxylase 1 (.1.2) AT1G36180 3697 / 0 ACC2 acetyl-CoA carboxylase 2 (.1.2) AT5G35360 215 / 2e-59 CAC2 acetyl Co-enzyme a carboxylase biotin carboxylase subunit (.1.2.3) AT1G03090 204 / 5e-54 MCCA methylcrotonyl-CoA carboxylase alpha chain, mitochondrial / 3-methylcrotonyl-CoA carboxylase 1 (MCCA) (.1), methylcrotonyl-CoA carboxylase alpha chain, mitochondrial / 3-methylcrotonyl-CoA carboxylase 1 (MCCA) (.2) AT1G29900 63 / 4e-09 VEN3, CARB VENOSA 3, carbamoyl phosphate synthetase B (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.005G169100 [exp] 4356 / 0 AT1G36160 3800 / 0.0 PASTICCINO 3, GLOSSYHEAD 1, GURKE, EMBRYO DEFECTIVE 22, acetyl-CoA carboxylase 1 (.1.2) Potri.018G146300 [exp] 216 / 6e-60 AT5G35360 911 / 0.0 acetyl Co-enzyme a carboxylase biotin carboxylase subunit (.1.2.3) Potri.006G078200 [exp] 214 / 4e-59 AT5G35360 926 / 0.0 acetyl Co-enzyme a carboxylase biotin carboxylase subunit (.1.2.3) Potri.005G213300 [exp] 217 / 3e-58 AT1G03090 1099 / 0.0 methylcrotonyl-CoA carboxylase alpha chain, mitochondrial / 3-methylcrotonyl-CoA carboxylase 1 (MCCA) (.1), methylcrotonyl-CoA carboxylase alpha chain, mitochondrial / 3-methylcrotonyl-CoA carboxylase 1 (MCCA) (.2) Potri.010G023100 [exp] 56 / 6e-07 AT1G29900 1902 / 0.0 VENOSA 3, carbamoyl phosphate synthetase B (.1)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10006934 [exp] 3793 / 0 AT1G36160 3698 / 0.0 PASTICCINO 3, GLOSSYHEAD 1, GURKE, EMBRYO DEFECTIVE 22, acetyl-CoA carboxylase 1 (.1.2) Lus10024748 [exp] 2451 / 0 AT1G36160 2397 / 0.0 PASTICCINO 3, GLOSSYHEAD 1, GURKE, EMBRYO DEFECTIVE 22, acetyl-CoA carboxylase 1 (.1.2) Lus10024747 [exp] 642 / 0 AT1G36160 632 / 0.0 PASTICCINO 3, GLOSSYHEAD 1, GURKE, EMBRYO DEFECTIVE 22, acetyl-CoA carboxylase 1 (.1.2) Lus10017534 [exp] 216 / 1e-59 AT5G35360 892 / 0.0 acetyl Co-enzyme a carboxylase biotin carboxylase subunit (.1.2.3) Lus10003679 [exp] 219 / 4e-59 AT2G01690 614 / 0.0 ARM repeat superfamily protein (.1.2) Lus10028196 [exp] 212 / 4e-58 AT5G35360 892 / 0.0 acetyl Co-enzyme a carboxylase biotin carboxylase subunit (.1.2.3) Lus10028753 [exp] 219 / 9e-58 AT5G35360 888 / 0.0 acetyl Co-enzyme a carboxylase biotin carboxylase subunit (.1.2.3) Lus10042623 [exp] 213 / 4e-57 AT1G03090 1064 / 0.0 methylcrotonyl-CoA carboxylase alpha chain, mitochondrial / 3-methylcrotonyl-CoA carboxylase 1 (MCCA) (.1), methylcrotonyl-CoA carboxylase alpha chain, mitochondrial / 3-methylcrotonyl-CoA carboxylase 1 (MCCA) (.2) Lus10042899 [exp] 195 / 2e-52 AT5G35360 821 / 0.0 acetyl Co-enzyme a carboxylase biotin carboxylase subunit (.1.2.3) Lus10022078 [exp] 132 / 2e-33 AT1G03090 405 / 4e-138 methylcrotonyl-CoA carboxylase alpha chain, mitochondrial / 3-methylcrotonyl-CoA carboxylase 1 (MCCA) (.1), methylcrotonyl-CoA carboxylase alpha chain, mitochondrial / 3-methylcrotonyl-CoA carboxylase 1 (MCCA) (.2)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0105 [poplar] [flax] Hybrid PF00364 [poplar] [flax] Biotin_lipoyl Biotin-requiring enzyme CL0127 [poplar] [flax] ClpP_crotonase PF01039 [poplar] [flax] Carboxyl_trans Carboxyl transferase domain CL0127 [poplar] [flax] PF08326 [poplar] [flax] ACC_central Acetyl-CoA carboxylase, central region
Representative CDS sequence Show only first row Show all	>Potri.002G092700.1 pacid=42780063 polypeptide=Potri.002G092700.1.p locus=Potri.002G092700 ID=Potri.002G092700.1.v4.1 annot-version=v4.1 ATGACATACATTGCATATCCCGCGAACTGTAACACAAAATCACATTTCTCCCGTTCCCTCTCTCTCTCTCTCTCTCTCTCTCGTCCTAATCTCACCCCTC GATGCTTGAGTCGAGTTGAATTTGATCCCAGCTTCTCAGATTCCAGCAGCATGTCAGAAGCACAAAGGAGACCGCCTATAACCTTGGCTGTTGGGCGTGG GAATGGGTACATAAATGGGATAGCTTCAATAAGGAGCCCTGCTACAATATCCCTTGTGGATCATTTCTGCCGTTCCCTTGGAGGAAAGAAGCCAATACAT AGTATTTTAGTTGCAAACAATGGAATGGCAGCTGTCAAGTTTATGCGTAGCATTAGGACATGGGCTTATGAAACATTTGGTACGGATAAAGCTATCCTGT TGGTGGCTATGGCTACTCCAGAAGATATGAGAATCAATGCAGAACATATCAGAATAGCCGATCAGTTTGTGGAAGTTCCCGGTGGAACAAACAATAATAA CTATGCCAATGTGCAGCTCATTGTAGAGATGGCAGAGATAACTCATGTCGATGCAGTTTGGCCTGGTTGGGGTCATGCTTCTGAGAACCCTGAGCTTCCA GATGCACTGAATGCAAAGGGGATTGTATTTCTTGGCCCCCCGGCTACATCAATGGCAGCATTGGGAGATAAGATTGGTTCATCCTTGATTGCTCAAGCAG CTGATGTTCCTACCCTACCATGGAGTGGTTCTCATGTGAAACTTTCTCCACAAAGTTGCTTGGTTACTATCCCAGATGAGATATATAGGGAAGCATGTGT ATATACAACAGAGGAAGCAATTGCTAGCTGTCAAGTTGTCGGTTACCCTGCAATGATAAAGGCATCATGGGGTGGTGGTGGTAAAGGCATAAGAAAGGTT CATAATGACGATGAAGTCAGGGCACTGTTCAAGCAAGTTCAGGGTGAAGTCCCAGGCTCACCGATATTTATTATGAAGGTTGCTTCTCAGAGTCGACATT TAGAAGTCCAGTTACTATGTGATCATTATGGAAATGTAGCAGCATTGCATAGCCGCGATTGCAGCATTCAGAGGCGGCACCAGAAAATAATTGAGGAGGG TCCAATTACTGTTGCGCCAGTGGACACGGTCAAAAAACTAGAACAGGCAGCACGAAGGTTAGCAAAATGTGTGAATTATGTGGGAGCAGCCACCGTTGAG TATTTGTATAGCATGGAGACCGGCGAGTATTACTTCTTAGAACTCAACCCTCGGTTACAGGTGGAGCACCCTGTCACCGAGTGGATTGCTGAAATAAATC TGCCAGCAGCCCAGGTTGCAGTGGGGATGGGTATTCCTCTCTGGCAAATTGCTGAGATAAGGAGATTTTATGGAATGGAGCATGGCGGAGGTTATGATGC ATGGAGGAAAACTTCATTGGTTGCAACCCCTTTTGATTTTGACAAGGCTGAGTCCATAAGACCAAAAGGTCATTGTGTAGCTGTGCGTGTGACGAGTGAG GATCCAGATGATGGTTTTAAGCCTACGAGTGGAAAAGTACAGGAACTAAGTTTTAAAAGCAAGCCAAATGTGTGGGCTTACTTCTCTGTTAAGTCTGGAG GAGGCATTCATGAATTCTCAGATTCTCAATTTGGACATGTTTTTGCATTTGGGGAATCTAGAGCTTTGGCTATAGCAAATATGGTCCTTGGACTTAAAGA AATTCAAATCCGTGGAGAAATCCGTACAAATGTTGACTACACAATTGACCTTTTACATGCTTCAGATTACAGAGATAATAAAATCCACACAGGTTGGTTG GACAGTAGGATTGCGATGCGGGTTAGAGCAGAGAGACCCCCATGGTATCTCTCTGTTGTCGGAGGGGCTCTGTATAAAGCATCTGCTAGCAGCGCAGCTG TAGTTTCTGATTATATAGGTTATCTGGAAAAGGGGCAAATCCCTCCCAAGCACATATCTCTTGTTAACTCTCAAGTTTCACTGAACATTGAAGGAAGCAA ATACACGATTGACATGGTTAGAGAGGGACCGGGCAGCTATAAATTGAGGATGAACAAATCAGAGCTTGAAGTAGAGATACATACTTTACGTGATGGAGGT CTACTGATGCAGCTGGATGGGAACAGCCATGTGATATATGCAGAAGAAGAAGCAGCTGGAACACGCCTCCTCATCGATGGAAGGACTTGCTTGTTACAGA ATGATCATGATCCATCAAAATTAATGGCAGAGACACCATGCAAGTTGCTGAGATATTTGGTTTTGGATGGTAGTCATATTGATGCAGACATGCCATATGT CGAGGTTGAAGTTATGAAAATGTGCATGCCTCTTCTTTCACCTGCTTCTGGATTGATTCAGTTCAAAATGTCCGAAGGTCAAGCAATGCAGGCTGGTGAG CTTATAGCAAGGCTTGATCTTGATGATCCTTCAGCTGTACGAAAGGCTGAACCTTTTCATGGGAGCTTCCCGGTGCTGGGCCCTCCAACTGCTATTTCTG GAAAAGTTCATCAAAGATGTGCTGCAAGCCTAAATGCAGCCCGGATGATTCTTGCTGGTTATGATCATAATATTGACGAAGTAGTGCAAAACTTGCTTAT TTGTCTTGATAGTCCTGAACTCCCTTTCCTCCAATGGCAAGAGTGCTTGGCTGTTCTTGCAAACCGCCTTCCAAAAGATCTTAGAACTGAGTTGGAAGCT ACTTACAGAGAGTTTGAGGGGGTTTCAAGCTCCTTGAATATTGACTTCCCTGCCAAATTATTGAAGGGCGTGCTTGAGGCCCATTTATCCTCTTGTCCAG AAAAAGAAAAAGGAGCTCAGGAAAGGCTCGTTGAACCTTTGATGAGTCTAGTGAAGTCTTATGAGGGTGGAAGAGAGAGCCATGCCCGTGTTATTGTTCA GTCACTTTTTGAAGAGTATTTATCCGTTGAAGAGTTATTTAGTGATAACATCCAGGCTGATGTGATTGAACGTCTTCGACTTCAATATAAGAAAGATCTA TTGAAGGTTGTTGACATTGTGCTTTCTCATCAGGGGGTCAGAAGTAAAAATAAGCTGATACTATGCCTCATGGAACAACTGGTTTATCCCAACCCTGCTG CATATAGGGACAAACTAATCCGCTTCTCTCAACTTAACCACACAAATTATTCCGAGCTCGCACTAAAGGCAAGTCAGCTACTAGAACAAACCAAACTGAG TGAACTTCGTTCCACCATTGCTAGAAGCCTTTCTGAATTGGAGATGTTCACGGAGGATGGTGAAAACATGGATACTCCTAAGAGGAAAAGTGCAATTAAT GAACGAATGGAGGATCTTGTTAGTGCTCCTTTAGCTGTTGAAGATGCCCTTGTGGGTCTATTTGATCATGGCGACCACACCCTTCAAAGAAGAGTGGTGG AAACTTATGTCCGTAGGCTATACCAGCCCTATCTTGTGAAGGGGAGTGTCAGGATGCAGTGGCACAGATCTGGTCTTATTGCTTCATGGGAGTTCTTGGA AGAACACATTGAGAGAAATAATGGTTCTGGAGATCAAACATCAGATAAACCACTGGTTGAAAAGCACTGTGAGCAAAAATGGGGAGCTATGGTTATTATT AAATCTCTTCAATTTTTGCCAGCTATCATTAGTGCTGCATTACGGGAGACAGTGCATGACCCTCATGAAACAATTTCAAATGGATCTTTAGAACCAACTA GCTTTGGAAATATGATGCACATTGCATTGGTGGGAATCAACAATCCGATGAGTCTACTTCAGGATAGTGGCGATGAGGACCAGGCTCAGGAGAGAATTAA CAAATTAGCCAAAATACTCAAGGAGCAAGAGGTGGGCTCCAGTTTACACAGTGCTGGTGTTGGTGTTATTAGTTGCATTATACAGAGAGATGAAGGGCGC GCTCCTATGAGGCATTCCTTTCACTGGTCAGCAGAAAAGCTTTATTATGCAGAAGAGCCTCTGTTGCGTCACCTAGAACCTCCACTGTCCATCTACCTTG AATTGGACAAGCTTAAAGGCTATGAAAATATACAATATACTCCATCCCGGGACCGACAATGGCATTTGTACACTGTTGTAGACAAGCCAGTGCCAATTCG GAGAATGTTTCTTAGAACACTTGTAAGGCAGACAACAATGAATGAAGGATTTACTGCATATCAAGGGCTGGGAATGGAAACAGCTCGTACCCATTGGGCT GTTTCCTTTACTTCAAAGAGCATTTTGAGGTCATTGGTGGCTGCAATGGAAGAATTGGAGCTTAATGCGCATAATACTACGGTCAAATCTGACCATGCTC ATATGTACCTTTGTATCTTACGTGAGCAGCAAATAGATGATCTTGTGCCATACCCAAAGAAAGTTGAAATCGACGCTGAGCAAGAAGAAGTAGCAGTAGA GGCAATCTTGGAAGGGTTGGCTAGGGAAATCCATGCATTTGTTGGTGTGAGAATGCATAGACTCGGCGTCTGCGAGTGGGAAGTGAAGCTCTGGATGGCG TCATCTGGACAGGCAAATGGTGCTTGGAGGGTTGTCGTTGCAAATGTGACTGGTCACACATGCGCTGTGCATATATACCGGGAATTAGAGGATACTAGCA AGCACAGAGTGGTGTACCATTCAATCTCTGTACAGGGTCCTCTGCATCTTGTACCAGTAAATGCACACTATCAACCGTTGGGAGCTCTTGATCGAAAACG TCTAATGGCAAGGAAAAGCAGCACCACTTACTGCTATGATTTTCCATTGGCTTTTGAGACAGTCTTGGAACAAATATGGGCATCCCAATTCCCGGGCATG GAAAAACCTGAGGGTAAAGTTCTAAAGGTGACAGAGCTCATATTTGCTAATGAAAATGGTAGCTGGGGCACACCTCTTATTTCCACACAGCGTCCAGCTG GGCTCAATGATTTTGGCATGGTAGCTTGGTGCATGGAAATACTAACTCCTGAGTTCCCTTTAGGAAGGACTATTTTGGTAGTAGCAAATGACGTGACCTT CAAAGCAGGTTCTTTTGGTCAAAGAGAGGATGCATTCTTTCTTGCAGTGACTGATCTTGCCTGCAATAAGAAAATTCCACTTATTTATTTGGCAGCAAAT TCAGGTGCCCGTATTGGGGTTGCTGATGAAGTCAAATCCTGCTTTAAAGTTGGTTGGTCAGATGAACTTTTCCCTGATCGTGGCTTTCAGTATGTATATT TAAGTCCTTTGGATCATGCTCGGATCAGATCATCAGTGATAGCACATGAGTTGAAGCTGGAGAATGGAGAAACAAGATGGGTGATCGATGCCATTGTGGG GAAGGAGGATGGCCTGGGGGTAGAGAATTTATCTGGAAGTGGGGCCATTGCCAGTGCATATTCTAGGGCATACAAAGAAACCTTTACCTTAACTTATGTG ACTGGCAGAACTGTAGGAATTGGTGCCTATCTTACTCGGCTTGGAATGCGTTGTATACAGAGGCTTGATCAGCCTATTATTTTGACTGGTTTTTCTGCTT TAAACAAGCTTCTTGGTCGTGAGGTGTACAGCTCGCACATGCAACTTGGTGGACCTAAAATTATGGCAACCAACGGGGTAGTTCATCTTACTGTCTCGGA TGATCTTGAAGGGGTATCAGCTATTTTCAAGTGGCTAAGCTGTGTTCCTCATCGTGTGGGTGGTGCACTTCCCATTTCAAGTCCATTAGATTCTCCAGAA AGACCTGTGGATTACTTCCCAGAGAATTCATGTGACCCTCGAGCTGCTATTTGTGGTATTTTTGATGGCAGTGGGAAGTGGCTGGGTGGTATTTTTGACA AGGATAGCTTTGTTGAGACACTGGAAGGCTGGGCAAGGACAGTTGTGACAGGACGGGCGAAGCTTGGAGGAATCCCTGTTGGAATAGTCGCTGTTGAGAC ACAGACGGTTATGCAAGTGATCCCTGCTGACCCAGGACAGCTTGATTCCCATGAGAGGGTTGTTCCTCAGGCTGGGCAAGTATGGTTTCCAGATTCTGCA ACCAAAACAGCTCAGGCAATATTTGATTTCAATAGAGAAGAGCTCCCGCTTTTCATTTTAGCCAACTGGAGAGGCTTTTCTGGTGGGCAGAGAGACCTTT TTGAAGGTATCCTCCAGGCAGGTGCAACCATAGTTGAGAACCTTAGAAATTACAAACAACCTGTTTTTGTGTATATTCCCATGATGGGCGAGCTTCGCGG TGGGGCATGGGCTGTTCTTGATAGTAAGATCAATTCAGATCACATTGAAATGTATGCAGATCGAACAGCTAAAGGTAATGTCCTTGAGCCAGAAGGAATG ATTGAGATCAAATTCAGGACAAAGGATCTGCTTGAGTGCATGGGTAGGCTTGATCAACAGCTGATCAATTTGAAGTTGAAACTTCAGGAAGCCAGGAGCA GTGCACCATATGGAATGGCTGATTCTCTCCAACAGCAGATAAAAACTCGTGAAAAGCAGCTTTTGCCTGTCTACACTCAGATAGCCACAAAATTTGCCGA GCTTCATGATTCTTCTCTAAGAATGGAGGCAAAAGGTGTGATAAGAGAAGTTGTGGACTGGGCTAGATCGCGCCATTTCTTCTGTGGAAGGTTGCGTAGG AGAATTGCTGAGTGTTTGCTGATCAAGGATGTGATAGATGCAGCAGGTCAGCAGCTGACACATAAATCTGCAATGGACATGATCAAAATTTGGTTCTTGA ATTCAGATACTGCAAGAGGGAGAGAAGATGCTTGGGTGGATGATGAAGCATTCTTTGCATGGAAGGATGATTCAGGAAATTATGAAGCCAAGCTACAAGA GTTGCGGGTCCAGAAGGTATTGCTTCAGTTAACAAGCGTTGGTGAATCTATGTCAGATTTGAAAGCTCTACCACAAGGTCTTGCTGCCCTTCTAAGCAAG GTGGAACCATCAAGCAGAGAACATTTGGTTGATGAACTTCGTAAAGTGCTTAGTTGA
AA sequence Show only first row Show all	>Potri.002G092700.1 pacid=42780063 polypeptide=Potri.002G092700.1.p locus=Potri.002G092700 ID=Potri.002G092700.1.v4.1 annot-version=v4.1 MTYIAYPANCNTKSHFSRSLSLSLSLSRPNLTPRCLSRVEFDPSFSDSSSMSEAQRRPPITLAVGRGNGYINGIASIRSPATISLVDHFCRSLGGKKPIH SILVANNGMAAVKFMRSIRTWAYETFGTDKAILLVAMATPEDMRINAEHIRIADQFVEVPGGTNNNNYANVQLIVEMAEITHVDAVWPGWGHASENPELP DALNAKGIVFLGPPATSMAALGDKIGSSLIAQAADVPTLPWSGSHVKLSPQSCLVTIPDEIYREACVYTTEEAIASCQVVGYPAMIKASWGGGGKGIRKV HNDDEVRALFKQVQGEVPGSPIFIMKVASQSRHLEVQLLCDHYGNVAALHSRDCSIQRRHQKIIEEGPITVAPVDTVKKLEQAARRLAKCVNYVGAATVE YLYSMETGEYYFLELNPRLQVEHPVTEWIAEINLPAAQVAVGMGIPLWQIAEIRRFYGMEHGGGYDAWRKTSLVATPFDFDKAESIRPKGHCVAVRVTSE DPDDGFKPTSGKVQELSFKSKPNVWAYFSVKSGGGIHEFSDSQFGHVFAFGESRALAIANMVLGLKEIQIRGEIRTNVDYTIDLLHASDYRDNKIHTGWL DSRIAMRVRAERPPWYLSVVGGALYKASASSAAVVSDYIGYLEKGQIPPKHISLVNSQVSLNIEGSKYTIDMVREGPGSYKLRMNKSELEVEIHTLRDGG LLMQLDGNSHVIYAEEEAAGTRLLIDGRTCLLQNDHDPSKLMAETPCKLLRYLVLDGSHIDADMPYVEVEVMKMCMPLLSPASGLIQFKMSEGQAMQAGE LIARLDLDDPSAVRKAEPFHGSFPVLGPPTAISGKVHQRCAASLNAARMILAGYDHNIDEVVQNLLICLDSPELPFLQWQECLAVLANRLPKDLRTELEA TYREFEGVSSSLNIDFPAKLLKGVLEAHLSSCPEKEKGAQERLVEPLMSLVKSYEGGRESHARVIVQSLFEEYLSVEELFSDNIQADVIERLRLQYKKDL LKVVDIVLSHQGVRSKNKLILCLMEQLVYPNPAAYRDKLIRFSQLNHTNYSELALKASQLLEQTKLSELRSTIARSLSELEMFTEDGENMDTPKRKSAIN ERMEDLVSAPLAVEDALVGLFDHGDHTLQRRVVETYVRRLYQPYLVKGSVRMQWHRSGLIASWEFLEEHIERNNGSGDQTSDKPLVEKHCEQKWGAMVII KSLQFLPAIISAALRETVHDPHETISNGSLEPTSFGNMMHIALVGINNPMSLLQDSGDEDQAQERINKLAKILKEQEVGSSLHSAGVGVISCIIQRDEGR APMRHSFHWSAEKLYYAEEPLLRHLEPPLSIYLELDKLKGYENIQYTPSRDRQWHLYTVVDKPVPIRRMFLRTLVRQTTMNEGFTAYQGLGMETARTHWA VSFTSKSILRSLVAAMEELELNAHNTTVKSDHAHMYLCILREQQIDDLVPYPKKVEIDAEQEEVAVEAILEGLAREIHAFVGVRMHRLGVCEWEVKLWMA SSGQANGAWRVVVANVTGHTCAVHIYRELEDTSKHRVVYHSISVQGPLHLVPVNAHYQPLGALDRKRLMARKSSTTYCYDFPLAFETVLEQIWASQFPGM EKPEGKVLKVTELIFANENGSWGTPLISTQRPAGLNDFGMVAWCMEILTPEFPLGRTILVVANDVTFKAGSFGQREDAFFLAVTDLACNKKIPLIYLAAN SGARIGVADEVKSCFKVGWSDELFPDRGFQYVYLSPLDHARIRSSVIAHELKLENGETRWVIDAIVGKEDGLGVENLSGSGAIASAYSRAYKETFTLTYV TGRTVGIGAYLTRLGMRCIQRLDQPIILTGFSALNKLLGREVYSSHMQLGGPKIMATNGVVHLTVSDDLEGVSAIFKWLSCVPHRVGGALPISSPLDSPE RPVDYFPENSCDPRAAICGIFDGSGKWLGGIFDKDSFVETLEGWARTVVTGRAKLGGIPVGIVAVETQTVMQVIPADPGQLDSHERVVPQAGQVWFPDSA TKTAQAIFDFNREELPLFILANWRGFSGGQRDLFEGILQAGATIVENLRNYKQPVFVYIPMMGELRGGAWAVLDSKINSDHIEMYADRTAKGNVLEPEGM IEIKFRTKDLLECMGRLDQQLINLKLKLQEARSSAPYGMADSLQQQIKTREKQLLPVYTQIATKFAELHDSSLRMEAKGVIREVVDWARSRHFFCGRLRR RIAECLLIKDVIDAAGQQLTHKSAMDMIKIWFLNSDTARGREDAWVDDEAFFAWKDDSGNYEAKLQELRVQKVLLQLTSVGESMSDLKALPQGLAALLSK VEPSSREHLVDELRKVLS

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT1G36160		GSD1, PAS3, GK,...	PASTICCINO 3, GLOSSYHEAD 1, GU...		Potri.002G092700 [exp]	0	1	ACCASE.2
AT4G12560		CPR1, CPR30	CONSTITUTIVE EXPRESSER OF PR G...		Potri.016G012500 [exp]	17.57	0.8102
AT1G12420		ACR8	ACT domain repeat 8 (.1)		Potri.003G116600 [exp]	22.84	0.7943	ACR7.2
AT5G03040		IQD2	IQ-domain 2 (.1.2.3)		Potri.016G086300 [exp]	34.64	0.8054
AT4G00440			Protein of unknown function (D...		Potri.002G160000 [exp]	69.32	0.7811
AT1G31730			Adaptin family protein (.1)		Potri.004G235200 [exp]	75.57	0.7358
AT2G40850		ATPI4KGAMMA1 ,P...	phosphoinositide 4-kinase gamm...		Potri.006G031600 [exp]	106.13	0.7467
AT4G31570			unknown protein		Potri.018G008600 [exp]	112.76	0.7534
AT5G19390			Rho GTPase activation protein ...		Potri.001G275200 [exp]	123.51	0.7359
AT1G17200			Uncharacterised protein family...		Potri.001G436400 [exp]	153.39	0.7138
AT5G19290			alpha/beta-Hydrolases superfam...		Potri.008G040000 [exp]	160.85	0.7177

Compare expression of checked genes

Potri.002G092700 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.