Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol	SAB.2
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G58250 3388 / 0 SAB SABRE, Golgi-body localisation protein domain ;RNA pol II promoter Fmp27 protein domain (.1.2) AT5G49680 2855 / 0 KIP KINKY POLLEN, Golgi-body localisation protein domain ;RNA pol II promoter Fmp27 protein domain (.2)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10002604 [exp] 2805 / 0 AT1G58250 2636 / 0.0 SABRE, Golgi-body localisation protein domain ;RNA pol II promoter Fmp27 protein domain (.1.2) Lus10032833 [exp] 2805 / 0 AT1G58250 2629 / 0.0 SABRE, Golgi-body localisation protein domain ;RNA pol II promoter Fmp27 protein domain (.1.2) Lus10024282 [exp] 1104 / 0 AT1G58250 1054 / 0.0 SABRE, Golgi-body localisation protein domain ;RNA pol II promoter Fmp27 protein domain (.1.2) Lus10002603 [exp] 424 / 2e-133 AT1G58250 367 / 4e-114 SABRE, Golgi-body localisation protein domain ;RNA pol II promoter Fmp27 protein domain (.1.2) Lus10032834 [exp] 414 / 7e-129 AT1G58250 345 / 1e-105 SABRE, Golgi-body localisation protein domain ;RNA pol II promoter Fmp27 protein domain (.1.2) Lus10024283 [exp] 404 / 4e-126 AT1G58250 320 / 1e-97 SABRE, Golgi-body localisation protein domain ;RNA pol II promoter Fmp27 protein domain (.1.2) Lus10003839 [exp] 365 / 2e-113 AT1G58250 333 / 3e-103 SABRE, Golgi-body localisation protein domain ;RNA pol II promoter Fmp27 protein domain (.1.2)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF10347 [poplar] [flax] Fmp27_GFWDK RNA pol II promoter Fmp27 protein domain PF10351 [poplar] [flax] Apt1 Golgi-body localisation protein domain
Representative CDS sequence Show only first row Show all	>Potri.002G110700.5 pacid=42778134 polypeptide=Potri.002G110700.5.p locus=Potri.002G110700 ID=Potri.002G110700.5.v4.1 annot-version=v4.1 ATGGCAGCTTCGCCTGTCAAGTTTCTCTTCGGTTTCTTGTCGCTTTCCGTCACTTTGTGGTTGCTCTTCATTTTTGCTTCTAGGTTGATGGCTTGGATTT TGAGCCGGATCTTGGGGGCATCTGTTGGATTTCGAGTTGGGGGATGGAAATGTTTGAGGGATGTTGTGGTGAAGTTTAGAAAGGGTCCTGTTGAGTCTAT ATCAGTTGGTGAGGTTAGACTTAGCATACGTCAGTCTTTGGTCAAACTCGGGGTGGGTTTCATTTCCAGGGATCCCAAGCTACAAGTATTAATATGTGAC CTGGAGATTGTAATGAGGCCTTCTAGTAGAGGCACACAGAAAACAAAAACTCAGAGACCCCGACCGCGCACTTCAGGCAGGGGAAAATGGATGGTCTTAG CTAACGTCGCAAGATTTTTGTCAGTTTCTGTGACAGATTTGGCTGTGAAGACACCCAAAGCTACAATTGATGTCAAGGAACTGAGATTAGATATATCCAA AGATGGGGGATCCAAGCCAAATCTGTATGTCAAGCTTAACATATCACCTGTTCTTATCCACATGGGTGAACCACGCATCATTTCTGACCAAATGCCTAAC TTCAACAATGGAGGATGTATTTCTTCAGGAGAGGTGGCATTTGGTAATATGGACAGGTCTTCTGCTGCTTTTTTCTGCGAAGAGCTCTCTCTCTCTTGTG AATTTAATCATGATAGAGAAGTAGGTGTAATAATCCAGAATGTGGACATTAACAGTGGAGAGGTCACTGTTAATCTCAATGAGGAACTGCTTTCAAGAAA AAAGAGTTCATCCGATGCCTTTGCTCATACGGATAAAGAGTTGGTTGCTGATTCTTCAGTCTCTAAAAATCAACAGAACAAACAATCAAAACTTGTAGCA ATTACAAAGTATGCTTCCATGTTTCCAGAAAAGGTTTTCTTCACTTTACCGAAACTGGATGTTAGGTTTGTGCATCAAGAACATGATCTTGTTGTTGAGA ATAATATAATGGGCATTCAATTAAGGAGCATCAAATCACGATCCGCTGAAGATGTGGGAGAGAGTACACTAATTGAAGTTCAAATGGATTTCAGTGAGAT TCATCTTCTTAGAGAAGCTGGCACTTCTGTCTTGGAGATATTGAAAGTCGACGTGGTCTCATCTGTCTACATTCCTATACAGCCAATCTCACCAGTTAGA GCAGAAGTTGATGTTAAGCTCGGAGGTACACAGTGCAACATCATAATGAGCAGATTAAAGCCGTGGCTGCGCCTCCACCACTCAAAGAAGAAAAAAATGG TGCTTCGAGAGGAAACATCTACTCCAGTTAGGTCTCCGACCACTGAATCCAAAGTCATCATGTGGACATGTACTGTCTCTGCTCCTGAGATGACTATTGT GCTTTATAGTATCAATGGTTTGCCTCTGTATCAAGGCTGCTCCCAATCATCACATGTGTTTGCAAATAACATATCAAGCATGGGAACTGCAGTGCATATG GAACTTGGTGAATTAAACTTGCACATGGCAGATGAATATCAAGAATGCTTGAAGGAAAGCCCATTTGGTATGGAATCAAATTCAGGTGCCTTAATGCACA TAGCAAAGGTTAGTTTGGATTGGGGCAAGAAAGACATTGAATCATCGGAAGAAGATGGTTCTAGATGTAAATTGGTCCTTAATGTTGATGTCACTGGAAT GGGTATTTATTTGAATTTTAAGCGTGTAGAATCACTTATAACAACTGGCATTTCCTTTCAAGCTCTCTTGAAAAGTCTTTCAGCTTCTGGTAAAAGAACA GCACAGAGCCGAGGTGGTCGGTCATCTAAACCATCAGGGAAAGGGACTCGATTCTTGAAATTCAATCTGGAACGCTGTTCTGTAAACTTTTGTGGTGACA CAAGCTTGGAAAACACAGTTGTTCTGGATCCCAAGCGTGTCAATTATGGATCACAGGGTGGTCAGGTAATAATCAGTGTTTTGGATGATGGCACTCCTCG TACTGCAAGTATAATGTCCAGTGTTTCTGATGAGTGCAAGAAGTTGAAGTATTCTGTTTCTCTTGATATTTTCCATTTTACTCTGTGTATGAATAAGGAG AAACAGTCCACAGAGATGGAACTTGAAAGAGCAAGGTCTATGTATCAGGAATATTTGGAGGAACGCAGTCTTGATACAAAGGTTACAGTGTTTGACATGC AGAATGCAAAATTTGTACAGCGTTCTGGTGGTCTTAAAGGAATTGCCATCTGCTCTCTCTTCAGTGCTACTGATATTAAAGTCAGGTGGGAGCCTGATGT ACATCTGTCATTAATTGAACTAGTTCTGCAATTGAGGTTGCTTGTACACCATCAGAAGCTCCAGGTTTATGGTAATGAATCCAAGGAAGATGCCTCTAAC ATGAAAGACACTGATCAGAAAAAAGAAGCCCCTTCAGCACCAGAACATTTAGATAAGCATAAGAAAAGGGAATCCATTTTTGCTGTTGATGTGGAAATGC TCACCATATCTGGTGAGGTTGGAGATGGGGTTGAAGCAGTGGTTCAGGTTCAGTCAATTTTCTCTGAGAATGCCTGTATAGGATTGCTTCTTGAAGGGCT TCTTCTCAGTTTCAATGGGTCTAGAGTGTTGAAAAGCAGCAGAATGCAAATTTCCCGTATCCCTAGCACTCCCAGTAGCTTGTCTGATGCAAAAATACCA GCCTCCGTGACATGGGATTGGGTGATTCAAGGGCTTGATGTTCATATCTGCCTGCCATACAGGTTGCAGTTGCGCGCCATTGATGATTCCATTGAGGATA TGTGGCGGGGTTTGAAGCTTATAACTGCTGCTAAAACTGCACTGATATTTCCCATGAAGAAAGAAACCTCAAAGCCCAAAAGGTCCAGTTCAGCAAAATT TGGAAGTGTAAAATTTTTTATACGCAAGCTAACAGCTGATATTGAGGAAGAACCAATGCAGGGTTGGCTTGATGAACACTATCAGCTGATGAAGAACGAG GCTTCTGAGCTTGCTGTCAGGTTGAAATTCTTTGATGAATTTATTTCCAAAGCGAGCCATTGTCCTAAAGTTGCTGAAACAGTTGATTCTAGTCAAGAAA GAAAGGTTATGTATAATGGAGTTGAGATTGATCTGCAAAACCCATCAAATATTCAGGAATTGCGAGAAGGTATATATAAACAGTCATTTAGATCGTATTA CAATGCCTGTCAAAAGCTAGTAACATCAGAAGGTTCGGGTGCCTGTGTGGAAGGATTTCAGACTGGTTTCAAGCCCAGCACTGCTAGAATATCTCTTCTT TCTATTTCTGCTACAGAGTTAGAAGTAAGTTTAACAAGAATTGATGGTGGAGATGCTGGGATGATAGAGGTTCTGAAGAAACTTGATCCTGTTTGTTGCG AGAATGACATACCATTTTCTCGACTTTATGGGAGTAATATTTTCTTGCGTACAGGGAATCTGGCTGTTCAGTTAAGAAATTACACATTTCCTCTTTTTGC TGCTACTTCTGGTAAATGTGAAGGTTGCGTTGTGCTAGCTCAGCAGGCAACAAGTTTTCAGCCCCAAATTTACCAAGATGTCTTTATTGGGAGATGGAGA AAGGTGCGCATGCTTCGTTCCGCTAGTGGCACGACTCCTCCAGTTAAATCGTACTTTGATTTACCTTTACATTTTCAAAAAGGAGAAGTGTCTTTTGGAG TGGGTTATGAACCATCTTTTGCTGATGTGAGCTATGCTTTTATGGTGGCTCTTCGTAGAGCTAATCTAAGTGTTAGGAATTCTGATGCTCCACAAGTTCA ACCACCAAAAAAGGAGCGTAGCTTACCATGGTGGGATGATATGAGAAACTATATTCACGGAAATATCACTTTATTCTTCTCTGAAACTAGATGGCACGTT CTTGCAACAACTGATCCTTATGAAAAGCTTGACCAACTTCAGTTTGTATCTGGTTTGATGAAGATCCAGCAATCAGATGGTCGTGTTTATGTGTCTGCAC AGGATTTTAAGATTTTAATTAGCAGTTTGGAGAAACTGGCAAGCGGCTGTGGCTTAAAACTCCCTTCTGGTGCATCTGGTGCCTTACTTGAAGCCCCGGT CTTTACTCTTGAAGTCACAATGGATTGGGAATGTGATTCTGGAACTCCACTGAATCATTACTTGTACGCACTTCCAATTGAAGGGAAGCCTCGAGAAAAA GTTTTTGATCCATTCAGGTCTACATCTCTGTCCCTCCGATGGAACTTCTCTTTTAGGCCCTCCCCTCCCTCGTGTGAGAGTCAATTGCCTTCTTCCTCTT CAGTAGATAGCAAAGTTGTAAATGGAACTGTCTATGATCTACCTTACAAGCCAGAAAATGTTTCAACAGTTTCCCCAACTTTGAATATTGGTGCACATGA TTTAGCGTGGCTGATTAAGTTCTGGAACATGAATTATCTCCCTCCACACAAATTACGTTCCTTCTCCCGATGGCCTCGCTTTGGAATTGCAAGAGCTATC AGATCAGGCAATTTATCATTAGACAAGGTGATGACAGAATTTTTTCTCCGCATTGATGCTACACCTACTTGTATAAAACACATGCCTTTAGATGTTGATG ATCCGGCAAAAGGACTTACATTTAACATGACGAAGATGAAATATGAACTCTGTTATAGCCGGGGTAAGCAGATGTTCACTTTTGAATGCAAGCGTGATCC TCTTGATCTTGTTTACCAAGGTCTCGACCTTTACATGCCCAAGGCTATCTTAGATAAAGTGGACTCTAACAGTGTGCCAAAAGCAGTTCAAATGACCAGG AATAATTCTCAATCCTCAGCTGTTAATAGAATTCCCAGTGAGAAACGCAATAATATGGGTGGTTGCACTGAGAAGCACCGTGATGATGGATTTCTTTTGT CGTGTGATTATTTTACAATCAGAAGGCAGTCGCGAAAGGCTGATGCTGACAGGTTATCAGCATGGCAAGAGGCTGGGAGAAGAAACCTTGAGATGACATA CGTGAGGTCTGAGTTTGAAAATGGGAGTGAGAGTGATGATCACACAAGATCTGATCCAAGTGATGATGATGGATACAATGTAGTAATAGCTGACAACTGC CAGCAAGTTTTTGTTTATGGCCTCAAGCTTTTATGGACTATTGAGAATAGGGATGCTGTTTGGTCCTGGGTTGGCGGAATATCCAAAGCATTTGAACCCC CTAAGCCTTCTCCTTCTCGACAGAATGCGAGGAAATTGCATGAAGAGAACCAGTTAGATCCCAAATCTGAGGTGCTTCAAGATGATATCTCCAATCTCCC TTCTATCAGTCATAAAGTAGATACCCCTTCTCATCATGTGGAGACCTCAGGAACTCTTTCATCTCCATCACATTCAGCTAAAGTAAAGAATTCGTCATTT CCTTCAATTGTGACAAATGGAAGTATTGATGATTCTGAGGAAGAAGGGACTCGTCATTTCATGGTGAATGTTATGGAGCCACAATTCAATCTTCATTCAG AAGAAGCCAATGGTAGATTCTTGCTTGCTGCCGTTTCTGGTCGTGTTTTAGCTCGATCATTTAATTCTATTCTTCATGTTGGATATGAGATTATTGAACA AGGAATGGTCAATGGAAATGTACAACAAATTCCTGAACATGTACCTGAAATGACATGGAAGCGCATGGAGTTCTCTGTAATGTTGGAGCATGTACAGGCT CATGTTGCACCAACTGATGTTGATCCAGGGGCTGGATTGCAGTGGCTTCCAAAAATTCTTAGAAGCTCTCCAAAAGTAAAGCGTACTGGTGCTCTACTTG AAAGAGTGTTTATGCCTTGTGATATGTACTTTCGGTACACAAGACACAAAGGCGGTACTCCAGACTTGAAGGTCAAGCCTCTAAAAGAGCTTACATTCAA TTCTCATAATATAATGGCAACAATGACATCCCGGCAGTTTCAGGTTATGCTGGATGTGTTGACTAATCTTCTCTTTGCACGGCTCCCCAAGCCTAGAAAA AGCAGCCTGTCATATCCTGCTGAAGATGATGGAGATGTTGAAGAGGAGGCAGATGAGGTGGTTCCTGATGGTGTTGAAGAGGTAGAACTTGCGAAAATCA ACCTTGAACAGAAAGAGCGGGAGCATAAGTTGATTCTTAATGACATCAGGAAATTGTCTCTATTTAGCGATACTTCTGGAGACCCGCTTTCAAGAAAGGA AGCTGACTTGTGGATGGTCACTGGTGGAAGATACTCTCTGGTGCAAGGACTAAAGAGAGAGCTTGTAAGTGCAAAGAAGTCTAGGAAGGAGGCATCTGTA TCTCTAAGGATGGCTCTGCAGAAAGCTGCTCAGTTACGACTGATGGAGAAGGAGAAAAACAAAAGTCCATCCTATGCCATGCGTATATCTTTGAAAATTA ATAAAGTTGTTTGGAGCATGCTTGTAGATGGTAAAACTTTTGCAGAGGCTGAGATAAATGACATGATATTTGATTTTGACCGGGATTACAAGGATGTTGG GGTTGCTTTGTTTACAACAAAGTATTTTGTCGTGAGAAACTGCTTGTCTAATGCCAAGTGTGATATGGTGTTGTCACCATGGAATGCTCCAACAGATTGG GGAAAAGAAGTCATGCTACGTGTAGATGCAAAGCAAGGGGCTCCAAGGGATGGAAATTCGCGTATTGAACTTTTCCAGGTAAAGATTTTTCCCCTTAAGA TTTATTTGACAGAGACAATGTACAAAATGATGTGGGAATATTTCTTCCCTGAAGAAGAACAAGATTCACAACGGCGGCAGGAAGTTTGGAAGGTTTCAAC AACTGCTGGTGCAAAACGTGTTAAGAAAGGCCCATCGAGCCACGAAGCTTCTTCTTCATGCAGTCATACAACAAAAGAGTCTGATGTCCCATCCAAAGTG ATTGGCAGTTCAGCCCCTGAGTTAAGGAGAACATCTTCTTTTGATAGAACATGGGAGGAGACGGTTGCAGAGTCTGTTGCTACTGAACTTGTCTTGCAGG CCCACTCATCTGGCATATCTTCCTCAAAAAGTGAGCCATTTGATTCTATTGAGCAACCAGATGAATCATCTAGAAGCAAGTCAAAAGAGTCCAAGCCTGT GAAGTCTGGTCGGTCATCTCATGAGGAGAAAAAGGTTGGAAAAACAAATGAAGAGAAAAGATCTCGACCTCGAAAAGTAATGGAATTTAACAACATTAAG ATAAGCCAGGTTGAGCTGCAGCTTACTTATGAAAGCTCAAGATTTAATCTGCATGAACTTAAGCTGCTGATGGATACATTTCACCGTGTCGAGTTTACTG GGACTTGGAGAAGACTGTTCTCCAGAGTTAAGAAGCATGTTGTCTGGGGAACCTTGAAGTCTGTTACAGGAATGCAGGGTAAAAAGTTCAAAGACAAAGC ACACGGTCAACGGGATCCTAATGTAGCCAGCGTTCCTGATAGCGACCTTAATTTTAGTGACAATGATGATGGTCTGGCAGTGCAATCTGATCAATATCCA AACTGGCTCAAGCGTCCAACTGATGGAGCAGGTGATGGGTTTGTGACTTCCATAAGGGGTCTTTTCAATACCCAGCGTCGCAAGGCCAAAGCATTTGTAC TGCGAACAATGAGAGGTGAAGCAGAGAATGACTTTCATGGAGAGTGGAGTGAAAGTGATGCTGAGTTCTCTCCCTTTGCTCGGCAACTTACCATAACAAA AGCTAAGAGGCTTATTAAGCGGCACACGAAGAAATTCCGATCGAGAGGACAGAAAGCATCATCATCGCAACAAAGAGAATCACTTCCATCATCTCCAAGG GAATCCACTCCATTTGAAAGTGATTCATATAGCGATTCTTCACCATACGAGGATTTTCATGAGTAA
AA sequence Show only first row Show all	>Potri.002G110700.5 pacid=42778134 polypeptide=Potri.002G110700.5.p locus=Potri.002G110700 ID=Potri.002G110700.5.v4.1 annot-version=v4.1 MAASPVKFLFGFLSLSVTLWLLFIFASRLMAWILSRILGASVGFRVGGWKCLRDVVVKFRKGPVESISVGEVRLSIRQSLVKLGVGFISRDPKLQVLICD LEIVMRPSSRGTQKTKTQRPRPRTSGRGKWMVLANVARFLSVSVTDLAVKTPKATIDVKELRLDISKDGGSKPNLYVKLNISPVLIHMGEPRIISDQMPN FNNGGCISSGEVAFGNMDRSSAAFFCEELSLSCEFNHDREVGVIIQNVDINSGEVTVNLNEELLSRKKSSSDAFAHTDKELVADSSVSKNQQNKQSKLVA ITKYASMFPEKVFFTLPKLDVRFVHQEHDLVVENNIMGIQLRSIKSRSAEDVGESTLIEVQMDFSEIHLLREAGTSVLEILKVDVVSSVYIPIQPISPVR AEVDVKLGGTQCNIIMSRLKPWLRLHHSKKKKMVLREETSTPVRSPTTESKVIMWTCTVSAPEMTIVLYSINGLPLYQGCSQSSHVFANNISSMGTAVHM ELGELNLHMADEYQECLKESPFGMESNSGALMHIAKVSLDWGKKDIESSEEDGSRCKLVLNVDVTGMGIYLNFKRVESLITTGISFQALLKSLSASGKRT AQSRGGRSSKPSGKGTRFLKFNLERCSVNFCGDTSLENTVVLDPKRVNYGSQGGQVIISVLDDGTPRTASIMSSVSDECKKLKYSVSLDIFHFTLCMNKE KQSTEMELERARSMYQEYLEERSLDTKVTVFDMQNAKFVQRSGGLKGIAICSLFSATDIKVRWEPDVHLSLIELVLQLRLLVHHQKLQVYGNESKEDASN MKDTDQKKEAPSAPEHLDKHKKRESIFAVDVEMLTISGEVGDGVEAVVQVQSIFSENACIGLLLEGLLLSFNGSRVLKSSRMQISRIPSTPSSLSDAKIP ASVTWDWVIQGLDVHICLPYRLQLRAIDDSIEDMWRGLKLITAAKTALIFPMKKETSKPKRSSSAKFGSVKFFIRKLTADIEEEPMQGWLDEHYQLMKNE ASELAVRLKFFDEFISKASHCPKVAETVDSSQERKVMYNGVEIDLQNPSNIQELREGIYKQSFRSYYNACQKLVTSEGSGACVEGFQTGFKPSTARISLL SISATELEVSLTRIDGGDAGMIEVLKKLDPVCCENDIPFSRLYGSNIFLRTGNLAVQLRNYTFPLFAATSGKCEGCVVLAQQATSFQPQIYQDVFIGRWR KVRMLRSASGTTPPVKSYFDLPLHFQKGEVSFGVGYEPSFADVSYAFMVALRRANLSVRNSDAPQVQPPKKERSLPWWDDMRNYIHGNITLFFSETRWHV LATTDPYEKLDQLQFVSGLMKIQQSDGRVYVSAQDFKILISSLEKLASGCGLKLPSGASGALLEAPVFTLEVTMDWECDSGTPLNHYLYALPIEGKPREK VFDPFRSTSLSLRWNFSFRPSPPSCESQLPSSSSVDSKVVNGTVYDLPYKPENVSTVSPTLNIGAHDLAWLIKFWNMNYLPPHKLRSFSRWPRFGIARAI RSGNLSLDKVMTEFFLRIDATPTCIKHMPLDVDDPAKGLTFNMTKMKYELCYSRGKQMFTFECKRDPLDLVYQGLDLYMPKAILDKVDSNSVPKAVQMTR NNSQSSAVNRIPSEKRNNMGGCTEKHRDDGFLLSCDYFTIRRQSRKADADRLSAWQEAGRRNLEMTYVRSEFENGSESDDHTRSDPSDDDGYNVVIADNC QQVFVYGLKLLWTIENRDAVWSWVGGISKAFEPPKPSPSRQNARKLHEENQLDPKSEVLQDDISNLPSISHKVDTPSHHVETSGTLSSPSHSAKVKNSSF PSIVTNGSIDDSEEEGTRHFMVNVMEPQFNLHSEEANGRFLLAAVSGRVLARSFNSILHVGYEIIEQGMVNGNVQQIPEHVPEMTWKRMEFSVMLEHVQA HVAPTDVDPGAGLQWLPKILRSSPKVKRTGALLERVFMPCDMYFRYTRHKGGTPDLKVKPLKELTFNSHNIMATMTSRQFQVMLDVLTNLLFARLPKPRK SSLSYPAEDDGDVEEEADEVVPDGVEEVELAKINLEQKEREHKLILNDIRKLSLFSDTSGDPLSRKEADLWMVTGGRYSLVQGLKRELVSAKKSRKEASV SLRMALQKAAQLRLMEKEKNKSPSYAMRISLKINKVVWSMLVDGKTFAEAEINDMIFDFDRDYKDVGVALFTTKYFVVRNCLSNAKCDMVLSPWNAPTDW GKEVMLRVDAKQGAPRDGNSRIELFQVKIFPLKIYLTETMYKMMWEYFFPEEEQDSQRRQEVWKVSTTAGAKRVKKGPSSHEASSSCSHTTKESDVPSKV IGSSAPELRRTSSFDRTWEETVAESVATELVLQAHSSGISSSKSEPFDSIEQPDESSRSKSKESKPVKSGRSSHEEKKVGKTNEEKRSRPRKVMEFNNIK ISQVELQLTYESSRFNLHELKLLMDTFHRVEFTGTWRRLFSRVKKHVVWGTLKSVTGMQGKKFKDKAHGQRDPNVASVPDSDLNFSDNDDGLAVQSDQYP NWLKRPTDGAGDGFVTSIRGLFNTQRRKAKAFVLRTMRGEAENDFHGEWSESDAEFSPFARQLTITKAKRLIKRHTKKFRSRGQKASSSQQRESLPSSPR ESTPFESDSYSDSSPYEDFHE

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT1G58250		SAB	SABRE, Golgi-body localisation...		Potri.002G110700 [exp]	0	1	SAB.2
AT1G58230			binding (.1)		Potri.002G111000 [exp]	2.23	0.8733
AT3G60860			SEC7-like guanine nucleotide e...		Potri.002G149200 [exp]	3.60	0.7782
AT4G10930			unknown protein		Potri.001G089900 [exp]	3.87	0.8118
AT5G64070		PI-4KBETA1, PI4...	phosphatidylinositol 4-OH kina...		Potri.005G059000 [exp]	4.24	0.7970
AT3G62900			CW-type Zinc Finger (.1)		Potri.002G209409 [exp]	5.29	0.8553
AT5G24350			unknown protein		Potri.012G020000 [exp]	7.21	0.8212
AT3G50370			unknown protein		Potri.007G043300 [exp]	8.83	0.8216
AT1G21580			Zinc finger C-x8-C-x5-C-x3-H t...		Potri.002G077700 [exp]	11.74	0.8065
AT3G49600		SUP32, ATUBP26,...	ubiquitin-specific protease 26...		Potri.002G081600 [exp]	13.07	0.7662	UBP26.1
AT5G24350			unknown protein		Potri.015G008500 [exp]	13.85	0.7976

Compare expression of checked genes

Potri.002G110700 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.