Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G58230 3477 / 0 binding (.1) AT2G45540 429 / 4e-120 WD-40 repeat family protein / beige-related (.1.2) AT1G03060 376 / 4e-104 SPI SPIRRIG, Beige/BEACH domain ;WD domain, G-beta repeat protein (.1) AT4G02660 364 / 2e-100 Beige/BEACH domain ;WD domain, G-beta repeat protein (.1) AT3G60920 204 / 5e-52 unknown protein AT5G18525 108 / 6e-23 protein serine/threonine kinases;protein tyrosine kinases;ATP binding;protein kinases (.1) AT4G02730 56 / 2e-07 AtWDR5b human WDR5 \(WD40 repeat\) homolog b, Transducin/WD40 repeat-like superfamily protein (.1) AT3G50390 54 / 2e-06 Transducin/WD40 repeat-like superfamily protein (.1) AT3G18950 52 / 4e-06 Transducin/WD40 repeat-like superfamily protein (.1) AT1G71840 52 / 4e-06 transducin family protein / WD-40 repeat family protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.014G072600 [exp] 380 / 2e-105 AT2G45540 3647 / 0.0 WD-40 repeat family protein / beige-related (.1.2) Potri.002G150000 [exp] 379 / 6e-105 AT2G45540 3620 / 0.0 WD-40 repeat family protein / beige-related (.1.2) Potri.005G215400 [exp] 369 / 8e-102 AT1G03060 5153 / 0.0 SPIRRIG, Beige/BEACH domain ;WD domain, G-beta repeat protein (.1) Potri.002G047700 [exp] 369 / 1e-101 AT1G03060 5063 / 0.0 SPIRRIG, Beige/BEACH domain ;WD domain, G-beta repeat protein (.1) Potri.010G153300 [exp] 117 / 2e-25 AT5G18525 1878 / 0.0 protein serine/threonine kinases;protein tyrosine kinases;ATP binding;protein kinases (.1) Potri.002G051900 [exp] 70 / 5e-12 AT4G02730 524 / 0.0 human WDR5 \(WD40 repeat\) homolog b, Transducin/WD40 repeat-like superfamily protein (.1) Potri.019G087200 [exp] 59 / 4e-08 AT1G71840 515 / 0.0 transducin family protein / WD-40 repeat family protein (.1) Potri.001G384200 [exp] 51 / 1e-05 AT3G49180 125 / 7e-32 ROOT INITIATION DEFECTIVE 3, Transducin/WD40 repeat-like superfamily protein (.1) Potri.002G130400 [exp] 51 / 2e-05 AT2G26490 632 / 0.0 Transducin/WD40 repeat-like superfamily protein (.1)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10028167 [exp] 4544 / 0 AT1G58230 3404 / 0.0 binding (.1) Lus10042866 [exp] 3117 / 0 AT1G58230 2871 / 0.0 binding (.1) Lus10042867 [exp] 1058 / 0 AT1G58230 533 / 7e-164 binding (.1) Lus10009305 [exp] 438 / 1e-126 AT2G45540 1969 / 0.0 WD-40 repeat family protein / beige-related (.1.2) Lus10015858 [exp] 417 / 1e-125 AT2G45540 1209 / 0.0 WD-40 repeat family protein / beige-related (.1.2) Lus10018744 [exp] 372 / 1e-103 AT1G03060 2581 / 0.0 SPIRRIG, Beige/BEACH domain ;WD domain, G-beta repeat protein (.1) Lus10024828 [exp] 372 / 7e-103 AT1G03060 4870 / 0.0 SPIRRIG, Beige/BEACH domain ;WD domain, G-beta repeat protein (.1) Lus10015857 [exp] 87 / 3e-16 AT2G45540 2610 / 0.0 WD-40 repeat family protein / beige-related (.1.2) Lus10009307 [exp] 80 / 3e-14 AT2G45540 1420 / 0.0 WD-40 repeat family protein / beige-related (.1.2) Lus10013988 [exp] 64 / 2e-09 AT3G49180 471 / 4e-160 ROOT INITIATION DEFECTIVE 3, Transducin/WD40 repeat-like superfamily protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0186 [poplar] [flax] Beta_propeller PF00400 [poplar] [flax] WD40 WD domain, G-beta repeat CL0186 [poplar] [flax] PF02138 [poplar] [flax] Beach Beige/BEACH domain CL0004 [poplar] [flax] Concanavalin PF13385 [poplar] [flax] Laminin_G_3 Concanavalin A-like lectin/glucanases superfamily CL0266 [poplar] [flax] PH PF14844 [poplar] [flax] PH_BEACH PH domain associated with Beige/BEACH CL0266 [poplar] [flax] PF15787 [poplar] [flax] DUF4704 Domain of unknown function (DUF4704) CL0266 [poplar] [flax] PF16057 [poplar] [flax] DUF4800 Domain of unknown function (DUF4800)
Representative CDS sequence Show only first row Show all	>Potri.002G111000.2 pacid=42779571 polypeptide=Potri.002G111000.2.p locus=Potri.002G111000 ID=Potri.002G111000.2.v4.1 annot-version=v4.1 ATGAACATTGTTAAGGGTGTGGCTGATCTCATTCGAAGGACATCCAGTGGTCAAACTGGAGAGTCCATCCAGGGGTCATCATCTGGGAGGTTTTCTCCTC CTTCTCCAAAGATCTGTTTCAGTGAAGTAGGTGACGAGGCGGTTTTACATACACTCTGGGAGAAATATGAGAATGCTGTTGACAAGGCTGAAAAGAAGAA GCTATTTCATGTCTTCCTCAAGCAATTTTTAATGGTATTTGAGAAATGGGAACCCGCTAATGCCAGCCAGTTGCCAGAGGCTGCATTGACAACTGTGCCT CCCGTGGAGTATCCATTGCGGGTTGATGATATAATTGTTGGCTGCTCTGCTGGACACCCTGCAGAAATCATTCTTGCATTGACTGAAGAGATCACACAGT TAACCTCTCTTGTTTCTGAATTAAACACCAGTGTGGTGCGCACCAGGGTGGACTCACCAGGGAATTCGACAAGTTTGAGTATCACTTCTGAAGGGCTGCC CTTGTTGAATGCTTTAACAATAATTGTTCGTTCAATGCATAACTGCAGAGTTTTTGGATACTATGGCGGGATTCAAAAGCTAACTGCATTAATGAAAGGG GCTCTTGTACAGCTAAAATCAATAACAAGTGAACTATCTGGCGACGAGAGTCTGTCTAGTATTTCTCTAGATAAGACCAGACTTTTGCAACAAATACTTT TATATGTGGTGTCCATAATATGTGGTTATATTGATTTAAATACAAATTTATATGAGAAAGCACAGTTGTTCAGTAGCCATGCAGAGTTTTTCACCCCCAG TTGGGGTGCATCTTCCAATGAATCTTCTAGTGGTGTGAAGGTTCCTACTGAAACGAGGCTATATTGGCATCAGAGGGCAGTTGTGTCAGTGATGGAAGCT GGTGTTCTTAACTGGTTAGTAGAGTTGCTGCGAGTCATCAGAAGGTTGAGCATGAAAGAACAAAGGACAGATTTGTCACTTCAATATTTGACTTTGTGGA CTCTTCATCTAGCATTATCCAATAATCCACGTGGTCAAAATCATTTTAAAAGCATTGGAGGGCTTGAAGTTCTGCTGGATGGACAAGGACTTCCATCAAT TAATGTGCTATTGTGGAGGAACGCCTCTCATGTTGGTGATGAAAGAGGTGAGAATCCCTTGCTGAAAATATTCCAGTTACATGTACTGTCTTTGACAGTT CTAAGAGAGGCTGTCTTTGGTAATATGAACAACCTGCAGTTCCTATGTGAAAATGGAAGAATTCATAAATTTGCAAATAGCTTTTGTTCGCTTTCCTTCT TGCTTCAAGAGTGTGAGCAGAATACAAAGGATTTGTCTGTACAGGATGATTGCCAAATTCCTGTTTCTGACTTGGAAAATGAGAATCATGTAAAGATGGA ACGATCTTTTCCCCTTCCAGCTGATGCTGCTTATTCTAAACTTTGGAATGAATATGTTGTCAAATTGAGTGGGGTGCTGTGTTCTTTCATTGTTGCTCCT GAAAATATTAAACCTCACCATGTCCAAACAAACACTGGTCGAATTGGAATGCCAATTTCTGCAGCATATGGTGAGCTTTCAATTAAGTGGGTCATGGGGG TTCTTCTTACAGTCTTTCCATGCATCAAGGCTTGTTCAAATCAAAAGGAGTTGCCTAACCATTTAAGGGTCTTTGCTAATGTCCTACAACACTCTGTACT TGATGCCTTTACGAAGGTTCTTGTTTCATCACCTGTATCACTTGAAATATTCAGGGAAGAGGGGATATGGGACCTTATCTTCTCTGAGAATTTTTTCCAC TTCGGACCAGATTCAGAAGAAATGGCTGGAGAGTGTGGCAGTTACAATCAAGGGTTCCCAGGACAGCTTGACAGAAACTTGTCCTCTAGTAGCATTTCCA ATCAAACAAAGATTAGTAGTTTTGAGATCCTTCAGATGGAAGTAATCTCCTTTGTGGAATTTGCTGCAACTTGCAATGGAACTGTGGATAACTTGCTTGA GGTGTCTGTTTTACTGGATGCCTTAGAACAATGTGCATGTCATCCTGACATCGCTGTTGTTCTTGCAAAGAGTCTACTGCATATATTGCAGCTTTTGCCA GAGAAAACGATTGCCTCCTTCAAGTCTCTAAGTGCAGTTTCTCGGGTCCTCAAAGTTGCATGTATTCAAGCCGAAGAGTGTAGAAGGTCTGGAAATATGA GCCCTTCTCTTGAGAGTAAAATACTACCACTTCATGGTGGTCAGAGACCTAATTCAGAAAAGATGGGCCAAAGTTGGTTTACATGCATGGATACATGCAT GGAGCTCTTCACAAAATTTTTCTCAATTGCTGATGATGCAGGAAGTTTCGTTTTGTGTGACTGGACTTGCATTGATTGTTTGTTTGATTTATTTTGGGAA GAAGGCATGAGAAATCATGTGTTTGAGAGCATCCTTGACCTCATGAAGTTAGTTCCATCATCTCTAGAAGATCAAAAGGCAAAGTTGCATTTATGTTCAA AGTATTTAGAGACTTTCACTCAAATAAAGGAAAGGGAGAAAAGTTTTGCAGAGCTGTCTATCAATCTATTGGTTGGAATGAGAGAGATGCTCATGACCAA TCCTGCGTACTACCAAGCCTTGTTTCGTGATGGCGAATGCTTTTTGCATGTTGTCTCATTACTAAATGGTAATCTTGATGAGGTGTATGGAGAGAAGTTG GTTCTAAATGTCCTTCAAACTCTGACCTGCCTCCTAGAAAATAATGATGACTCAAAGGCTTCGTTTAGAGCCTTAGTTGGCAAGGGTTATCAGACAATGC AAAGTTTGCTATTGGACTTTTGTCAATGGCGTCCAAGTGAAGCACTTTTAAATGCACTTCTTGATATGCTTGTCGATGGAAAGTTTGATATAAAATCAAG CCCTCTCATAAAGAATGAGGATGTGATCATACTTTATCTCAGTGTTCTACAGAAGAGCAGTGACTCTTTGCGGCACTATGGTCTCAACATGTTCCAGCAA CTGCTCAGGGATTCCATTTCCAACCGAGCCTCATGTGTCAGAGCAGGAATGCTTAATTTTCTTCTTGATTGGTTTTCTCAAGAAGATAATGACAGCACCA TTTTGAAAATTGCGCAATTGATTCAGGTCGTTGGTGGGCATAGCATATCTGGGAAGGATATCCGTAAAATCTTTGCTCTTCTCCGAAGTGAAAAAGTCGG GATGCGGCAGCAGTACTGCTCACTATTATTGACCACTGTTTTGTCAATGCTCAATGAGAAGGGCCCAACTGCTTTTTTTGATTTCAACGGGAATGATTCT GGGATTATAGTTAAAACACCTGTGCAGTGGCCTCTCAGCAAGGGTTTTTCTTTTTCGTGCTGGCTTAGAGTGGAAAGCTTCCCTAGAAATGGAACAATGG GTCTTTTCAGTTTTCTTTCTGAAAATGGAAAAGGGTGCTTGGCAGCTGTTGGAAATGAAAGGCTTATTTATGAGTCAATTAATCTGAAGCAGCAGCGTAT TCAATTTCACATTAATTTAGCCAGTAAGAAATGGCATTTTCTTTGCATAACTCATAGCATTGGGCGGGCATTTTCTGGGGGTAGCCTGTTGAGATGTTAT GTGAATGGTGATCTCGTGGCATCTGAACGATGCAGATATGCAAAAGTTAATGAATTATTGACGAGCAGTAGTATTGGCATGAAAATTAATTTGCCTCATA ATGAAGAAGAAATTTTTCCGGACTCCATTCGAGATTTCTTCTCTTTTCATGGTCAGATTGGTCCTGTCTACTTGTTTAGTGATGCCATTTCTTCTGAGCA AGTCCAGGGCATCTATTCCTTGGGACCAAGCTATATGTACTCGTTCCTTGATAATGAAGCCACACCTTTTTATGATAGCTCATTGCCCAGTGGAATTCTT GATTCTAAAGATGGTCTGTCATCAAAAATTATCTTTGGACTCAATGCCCAGGCAAGTGATGGCAAGAAGCTGTTTAATGTTTCACTGGTAACAGATCATG CATTAGATAAGAAGGCATTTGAAGCAACTGTTATGGCTGGTACACAGTTATGTTCACGACGCATGCTGCAACAGATAATTTACTGCGTCGGTGGCGTGTC TGTGTTTTTTCCTCTCATTTCCCAATCTGATAGGTATGACAATGAAGAAAGTGGATCCTTTGAACATGCATTGCTTACACCAATCACAAAAGAACGCCTG ACAGCTGAGGTTATTGAGCTTATAGCTTCTGTCCTAGATGATAATTTAGCAAATCAGCAGCAAATGCATCTTCTTTCTGGATTTTCAATACTGGGATTTT TATTGCAATCAGTTCCACCAGAGCTACTCAATTTGGAGACCCTTTCAGCTTTGAAACATCTGTTTAACGTTGCTGCAAATTGCGGGTTAGCTGAGCTGCT TGTTAAAGATGCCATATCTTGCATCTTTCTTAATCCTTTCATCTGGGTCTACACAGTATACAAGGTGCAGCGAGAGCTTTACATGTTTCTCATCCAGCAA TTTGACAATGATCCAAGATTACTCAAGAGTCTGTGTCAACTACCTCGTGTTATTGATATAATTCGTCAATTTTATTGGGACAACTCAAAATCTCGGTTTG CTATTGGAAGCAAGCCTCTTCGGCATCCCATTACCAAAGTTATTATTGGAGAGAGACCTAATAGAGAAGAAACTCACAAAATTCGTCTTCTTTTATTGAG TCTCGGTGAGATGAGCCTCAGGCAATGCATTGGCACTGCAGACATAAAGGCAATAATAGCCTTCTTTGAAACAAGCCAGGATATGGCATGCATTGAGGAT GTTCTGCATATGGTCATCCGTGCTCTCTCTCAAAAACAACTGCTTGTTGCTTTCCTTGAACAAGTTAATCTCATTGGTGGTTGCCACATTTTTGTTAATC TTCTTCAGAGGGAATATGAGCCTATCAGACTTCTCAGCTTGCAGTTTCTGGGAAGACTTTTGGTTGGTTTACAATCTGAGAGGAAGCCACCAAGACTCTT CAATCTTTCTGTTGGGAGATCCAGATCTGTTTCAGAAAGCCAGAAGAAAGTCAGTTCAAAAATGCAGCCAGTCTTCTCAGCTATATCTGATAGGTTGTTC AGATTTCCACTAACAGATAATTTGTGTGCAGCCTTGTTTGATGTTCTTCTTGGTGGTGCTAGTCCCAAACAGGTTTTGCAGAAATATAACCAGGTTGACA AGCAGAGAAGCAAAGGAAATAATTCTCATTTTCTTGTTCCTCAAATCTTGGTTATCATATTCGGATTCTTGTCTAGCTGTGAGGATGTATCCACTAGAAC GAAAATAATAAGGGATCTGCTTGATCTGCTTGATTCAAATTCTTCAAACATTGAAGCTTTGATGGAATATGGATGGAATGCATGGTTAACAGCCACTTTA AAACTTAACGTGATCAAAGACTATATAGTTGAGTCTCAAGACCAAACTCATAGTGAGAGACTCGAGCAGAATTTGGTGAGGAGTTTATTTTGTGTTGTTC TTTGCCACTATATGCTTTCAGTAAAAGGTGGCTGGCAACAGTTGGAAGAGACAGTGAATTTTCTACTCCTGCAATGTGACCAAGACAGCATCTCACGTAG AAAGTTGCTTCATGATATCTTTGAGGACCTGATTCAAAGGCTGGTAGACTTTTCTTTTGAGGAAAATATCTTTGCTGCACAACCTTGTCGGGACAATACA TTATATCTTCTACAACTGATGGATGAGATGCTCGTTGCTGAAATTGATCATAAGATTTTGTTTCCAGAAAACAGCTCTGAAGTGTCGATTGATTCTTCAG AACTAGAAAGTCAGAAGAATTTTAGTTCTGCACTCTCTCAGGTTGTGCAAGGAGAATTTAATAATCAGACATCTAGAAATCCGTGGGGTGGCAAGCATTC AACCACACATGAAGGTGAAGTAATCAATGATAAGTGGTGGGATTTGTATGAAAATTTGTGGATTATTATCAGCGAGATCAATGGCAAAGGGCCAAGCAAG ATGATGCTTAAATCATCAGCAGCAGCAGGACCATCATTGGGTCAAAGAGCACGTGGCTTAGTAGAATCATTGAATATTCCTGCAGCAGAAATGGCTGCGG TTGTTGTGTCAGGGGGGATTGGCAATGCATTAGCTGGAAAACCAAATAAAACTGCTGACAAAGCTATGCTTTTAAGAGGGGAGAGGTGCCCAAGAATTGT TTTCCGACTTGCTATTCTGTATCTTTGCAGATCTTCCCTAGAAAGAGCATCTCGGTGTGTGCAACAGGTTATTGCACTTTTACCTTCTATTCTGGCTGCC GATGATGAGCAAAGTAAGAGCAGGTTGCAGCTTTTCATCTGGTCTTTGCTTGCTGTAAGGTCTGAATATGGGGTGTTAGATGATGGTGCTCGTCTTCATG TTATATCTCACCTAATTCGAGAAACAATCAACTGTGGTAAATCGATGCTGGCTTCTAGCATTGTGGGTAGAGATGACTCTTCTGATACAGGGAGTAACTC AAAAGACACCAGCTCTATTCACAGTATAATTCAAAAGGATCGAGTGCTTGCAGCGGTTTCTGACGAGGCAAAATACATAAAATCATCAATATCTGACCGC ACCAGGCAGTTGGAGGAGCTCCATGCTAGGATGGATGAGAATTCCACTGTGGAAACTACTAACAAGAAAGCATTTGAAGATGAGATACAAAATAGTTTGA ACTCAATTGTTGCTTTGGATGACAGTAGAAGAGCTGCACAGCAGCTTGTGCACGAGGAAGAGGAGCAAAATGTTGCAGAGAAGTGGATGCACATGTTCCG CACATTGATTGATGAGAGAGGTCCGTGGTCAGCTAATCTTTTTCCAAATGGTGTTGTAAAGCACTGGAAACTTGACAAGACAGAGGATGCATGGAGACGC AGACCCAAGTTAAGACAGAACTATCACTTTGATGAGAAGCTATGTCTTCCTCCTTCATCCTCTAGCAATGAGGATACTCTTCCTGTAAATGAAACCAAAA ATAGTTTTGTGGGCCATATTCCTGAGCAAATGAAGCAGTTTCTATTGAAAGGAGTGCGCAGGATAACTGATGAGGTGATTTCAGAAGCTGGTGAAAATGA TGCTGAAACCAGTGGGCAAACAACACCTATCCCTGATGATCCTTCAGAGAGTCAACGCTTGGATCTTGTTGGAGACAGTAGCAGTCAGAATGAAATTGTA CAAGACAAAAGAGATTCTTCTTCCACTTCACAAGAAACAGAAACTAGTGAGGTTCTCATGTCTGTTCAATGTGTACTTGTAACACCAAAAAGAAAACTGG CTGGAAATTTGGCAGTCAAGAAAAATTTCTTGCACTTTTTTGGTGAGTTTTTGGTTGAAGGTACTGGAGGATCATCTGTATTCAAAAACTTCCAAGCTTC TATCAAGTCTGATGCAAACAAGCTTGAACAGAAACATAAGTCTCTTAACTGGCCTATACATGTCAATTTTAGCCCTGAGAAGGTGATTTCTGTTGATAAT ACAGTCTTAGCAAATGAAAATGTGCAGCAAAGGCAGTTAAAACATGTGAGGCGACATAAAAGATGGAGTGTTGACAAGATAAAGGCTGTCCATTGGAGTC GTTATCTGCTTAGATACAGTGCCATAGAGATTTTCTTCAGTGACTCTGTTGCTCCTGTCTTCTTGAATTTCGCATCACAGAAGGATGCAAAAGAAGTTGG AACATTAATAGTTGCTACTCGAAATGAATTCTTGTTTCCGAAAGGAAGTAGTAAGGACAAGAGTGGGACTATTTCATTTGTTGATAGGCATGTAGCCTTG CGGATGGCAGAAATTGCCAGGGAGAATTGGAGGAGAAGGGATATAACGAACTTTGAATACCTGATGATCCTCAACACACTTGCAGGAAGATCTTACAATG ACTTAACACAGTATCCTGTCTTCCCTTGGGTTTTGGCAGATTATTCCTCTGAGGATCTTGATTTTAACAAGGCTTTGACCTTTCGGGATCTTACTAAACC TGTTGGAGCTCTTGATGTAAAACGTTTTGAGGTGTTTGAAGACAGGTATCGCAGCTTCTCTGATCCTGATATACCCAGCTTCTACTATGGGTCTCATTAT TCAAGCATGGGGATTGTGCTTTATTACCTTCTTAGGTTAGAGCCATTCACATCTCTTCACCGTAATTTGCAGGGTGGTAAGTTTGATCATGCAGATCGCC TTTTCCAAAGCATTGAAGGCACATATCGAAATTGTCTTTCTAATACTAGTGATGTGAAGGAGTTGATTCCTGAGTTCTTTTACATGCCGGAGTTTCTTGT TAATTCAAATTCTTATCATTTGGGAGTCAAACAGGACGGGGAACCACTAGGGGATGTTTGCCTCCCTCCCTGGGCCAAGGGTTCACCTGAATTATTTATA AATAAAAATCGAGATGCACTTGAAAGTGAATATGTTAGCTCAAATCTCCATCACTGGATTGATTTGGTGTTTGGTTACAAGCAGCGAGGAAAACCAGCAG TGGAGGCTGCAAATATTTTTTATTATTTAACTTACGAAGGTGCTGTTGATCTGGACACTATGGAAGATGAGTTGCAGAGATCAGCAATTGAAGACCAGAT TGCGAACTTTGGCCAAACTCCAATTCAGATTTTCCGCAAGAAACACCCTAGAAGAGGGCCTCCAATTCCAATTGCCCGTCCTTTATACTTCGCACCTGAT TCCATTAATTTATCATCCATTGTATCTAGTACAAGTCATCCACCTTCAGCTGTATTATATGTTGGTACTTTGGATTCGAATATTGTTCTCGTAAACCAAG GGCTAACTTTGTCAGTTAAGATGTGGTTGACAACTCAGCTTCAATCTGGTGGAAATTTCACTTTCTCTAGCTTCCAGGAACCGCTATTTGGAGTTGGTTA TGATGTTCTTTCTGCTCGAAAAATTGGCAGTCCTTTGGCTGAAAATGTTGAACTAGGAGCACAATGCTTTGCAATATTGCAAACACCAACCGAGAATTTT TTAATCTCATGTGGTAATTGGGAAAATAGTTTCCAAGTCATTTCTTTAAGTGATGGAAGAATGGTGCAGAGCACTCGACAACATAAAGATGTGGTCAGCT GTGTGGCAGTGACAGATGATGGTTGTTTCCTTGCTACTGGAAGTTACGACACCACAGTCATGGTTTGGGAGGTTCTTCGTGCCCGAATTACTGAAAAGAG AGTTCGAAACACTCCGACTGAACTAGCCCGTAAAGATTATGTCATTGCTGAAACTCCCTTTCATATTCTCTGTGGTCACGATGACATAATTACATGTTTA TGTGCTAGTGTGGAGCTTGATTTAGTTATTAGTGGTTCAAAGGATGGAACTTGTGTTTTCCATACCTTGAGGGAGGGAAAATATGTAAGATCTTTACGCC ATCCATCTGGCAATGCATTGTCAAAACTCGTTGCATCTCGGCATGGGCGGGTAGTCCTTTATGCTGATGAGGATCTCAGTTTACATCTGTATTCTATTAA CGGAAAGCACCTTGCCTCCTCTGAATCTAATGGGCGCCTCAACTGTGTTGAACTTAGCAAATGTGGTGAGTTCTTGGTTTGTGCAGGTGACCAAGGACAG ATAGTTGTGCGCTCTATGAACACATTTGATATTGTCAAAAGGTATAATGGAGTTGGAAAGATTATAACTTGTCTTACAGTAACTGTGGAGGAATGCTTCA TAGCTGGGACCAAGGATGGAAGCCTTCTTGTGTACTCCATAGAAAATCCTCAACTTCGTAAGACTAGCATTCCTCGTATGAAATCTAAATCTTCTGTATC AGGATAG
AA sequence Show only first row Show all	>Potri.002G111000.2 pacid=42779571 polypeptide=Potri.002G111000.2.p locus=Potri.002G111000 ID=Potri.002G111000.2.v4.1 annot-version=v4.1 MNIVKGVADLIRRTSSGQTGESIQGSSSGRFSPPSPKICFSEVGDEAVLHTLWEKYENAVDKAEKKKLFHVFLKQFLMVFEKWEPANASQLPEAALTTVP PVEYPLRVDDIIVGCSAGHPAEIILALTEEITQLTSLVSELNTSVVRTRVDSPGNSTSLSITSEGLPLLNALTIIVRSMHNCRVFGYYGGIQKLTALMKG ALVQLKSITSELSGDESLSSISLDKTRLLQQILLYVVSIICGYIDLNTNLYEKAQLFSSHAEFFTPSWGASSNESSSGVKVPTETRLYWHQRAVVSVMEA GVLNWLVELLRVIRRLSMKEQRTDLSLQYLTLWTLHLALSNNPRGQNHFKSIGGLEVLLDGQGLPSINVLLWRNASHVGDERGENPLLKIFQLHVLSLTV LREAVFGNMNNLQFLCENGRIHKFANSFCSLSFLLQECEQNTKDLSVQDDCQIPVSDLENENHVKMERSFPLPADAAYSKLWNEYVVKLSGVLCSFIVAP ENIKPHHVQTNTGRIGMPISAAYGELSIKWVMGVLLTVFPCIKACSNQKELPNHLRVFANVLQHSVLDAFTKVLVSSPVSLEIFREEGIWDLIFSENFFH FGPDSEEMAGECGSYNQGFPGQLDRNLSSSSISNQTKISSFEILQMEVISFVEFAATCNGTVDNLLEVSVLLDALEQCACHPDIAVVLAKSLLHILQLLP EKTIASFKSLSAVSRVLKVACIQAEECRRSGNMSPSLESKILPLHGGQRPNSEKMGQSWFTCMDTCMELFTKFFSIADDAGSFVLCDWTCIDCLFDLFWE EGMRNHVFESILDLMKLVPSSLEDQKAKLHLCSKYLETFTQIKEREKSFAELSINLLVGMREMLMTNPAYYQALFRDGECFLHVVSLLNGNLDEVYGEKL VLNVLQTLTCLLENNDDSKASFRALVGKGYQTMQSLLLDFCQWRPSEALLNALLDMLVDGKFDIKSSPLIKNEDVIILYLSVLQKSSDSLRHYGLNMFQQ LLRDSISNRASCVRAGMLNFLLDWFSQEDNDSTILKIAQLIQVVGGHSISGKDIRKIFALLRSEKVGMRQQYCSLLLTTVLSMLNEKGPTAFFDFNGNDS GIIVKTPVQWPLSKGFSFSCWLRVESFPRNGTMGLFSFLSENGKGCLAAVGNERLIYESINLKQQRIQFHINLASKKWHFLCITHSIGRAFSGGSLLRCY VNGDLVASERCRYAKVNELLTSSSIGMKINLPHNEEEIFPDSIRDFFSFHGQIGPVYLFSDAISSEQVQGIYSLGPSYMYSFLDNEATPFYDSSLPSGIL DSKDGLSSKIIFGLNAQASDGKKLFNVSLVTDHALDKKAFEATVMAGTQLCSRRMLQQIIYCVGGVSVFFPLISQSDRYDNEESGSFEHALLTPITKERL TAEVIELIASVLDDNLANQQQMHLLSGFSILGFLLQSVPPELLNLETLSALKHLFNVAANCGLAELLVKDAISCIFLNPFIWVYTVYKVQRELYMFLIQQ FDNDPRLLKSLCQLPRVIDIIRQFYWDNSKSRFAIGSKPLRHPITKVIIGERPNREETHKIRLLLLSLGEMSLRQCIGTADIKAIIAFFETSQDMACIED VLHMVIRALSQKQLLVAFLEQVNLIGGCHIFVNLLQREYEPIRLLSLQFLGRLLVGLQSERKPPRLFNLSVGRSRSVSESQKKVSSKMQPVFSAISDRLF RFPLTDNLCAALFDVLLGGASPKQVLQKYNQVDKQRSKGNNSHFLVPQILVIIFGFLSSCEDVSTRTKIIRDLLDLLDSNSSNIEALMEYGWNAWLTATL KLNVIKDYIVESQDQTHSERLEQNLVRSLFCVVLCHYMLSVKGGWQQLEETVNFLLLQCDQDSISRRKLLHDIFEDLIQRLVDFSFEENIFAAQPCRDNT LYLLQLMDEMLVAEIDHKILFPENSSEVSIDSSELESQKNFSSALSQVVQGEFNNQTSRNPWGGKHSTTHEGEVINDKWWDLYENLWIIISEINGKGPSK MMLKSSAAAGPSLGQRARGLVESLNIPAAEMAAVVVSGGIGNALAGKPNKTADKAMLLRGERCPRIVFRLAILYLCRSSLERASRCVQQVIALLPSILAA DDEQSKSRLQLFIWSLLAVRSEYGVLDDGARLHVISHLIRETINCGKSMLASSIVGRDDSSDTGSNSKDTSSIHSIIQKDRVLAAVSDEAKYIKSSISDR TRQLEELHARMDENSTVETTNKKAFEDEIQNSLNSIVALDDSRRAAQQLVHEEEEQNVAEKWMHMFRTLIDERGPWSANLFPNGVVKHWKLDKTEDAWRR RPKLRQNYHFDEKLCLPPSSSSNEDTLPVNETKNSFVGHIPEQMKQFLLKGVRRITDEVISEAGENDAETSGQTTPIPDDPSESQRLDLVGDSSSQNEIV QDKRDSSSTSQETETSEVLMSVQCVLVTPKRKLAGNLAVKKNFLHFFGEFLVEGTGGSSVFKNFQASIKSDANKLEQKHKSLNWPIHVNFSPEKVISVDN TVLANENVQQRQLKHVRRHKRWSVDKIKAVHWSRYLLRYSAIEIFFSDSVAPVFLNFASQKDAKEVGTLIVATRNEFLFPKGSSKDKSGTISFVDRHVAL RMAEIARENWRRRDITNFEYLMILNTLAGRSYNDLTQYPVFPWVLADYSSEDLDFNKALTFRDLTKPVGALDVKRFEVFEDRYRSFSDPDIPSFYYGSHY SSMGIVLYYLLRLEPFTSLHRNLQGGKFDHADRLFQSIEGTYRNCLSNTSDVKELIPEFFYMPEFLVNSNSYHLGVKQDGEPLGDVCLPPWAKGSPELFI NKNRDALESEYVSSNLHHWIDLVFGYKQRGKPAVEAANIFYYLTYEGAVDLDTMEDELQRSAIEDQIANFGQTPIQIFRKKHPRRGPPIPIARPLYFAPD SINLSSIVSSTSHPPSAVLYVGTLDSNIVLVNQGLTLSVKMWLTTQLQSGGNFTFSSFQEPLFGVGYDVLSARKIGSPLAENVELGAQCFAILQTPTENF LISCGNWENSFQVISLSDGRMVQSTRQHKDVVSCVAVTDDGCFLATGSYDTTVMVWEVLRARITEKRVRNTPTELARKDYVIAETPFHILCGHDDIITCL CASVELDLVISGSKDGTCVFHTLREGKYVRSLRHPSGNALSKLVASRHGRVVLYADEDLSLHLYSINGKHLASSESNGRLNCVELSKCGEFLVCAGDQGQ IVVRSMNTFDIVKRYNGVGKIITCLTVTVEECFIAGTKDGSLLVYSIENPQLRKTSIPRMKSKSSVSG

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT1G58230			binding (.1)		Potri.002G111000 [exp]	0	1
AT5G24740			Protein of unknown function (D...		Potri.001G455600 [exp]	1.00	0.9090
AT5G24350			unknown protein		Potri.012G020000 [exp]	2.00	0.8741
AT1G58250		SAB	SABRE, Golgi-body localisation...		Potri.002G110700 [exp]	2.23	0.8733	SAB.2
AT3G62900			CW-type Zinc Finger (.1)		Potri.002G209409 [exp]	3.00	0.8852
AT1G02890			AAA-type ATPase family protein...		Potri.002G205900 [exp]	3.60	0.8309
AT1G24300			GYF domain-containing protein ...		Potri.017G069220 [exp]	3.74	0.8891
AT1G02080			transcription regulators (.1.2...		Potri.014G058800 [exp]	4.24	0.8615
AT2G36810			ARM repeat superfamily protein...		Potri.006G120800 [exp]	4.79	0.8055
AT1G50030		TOR	target of rapamycin (.1.2)		Potri.001G289200 [exp]	6.70	0.8404	Pt-TOR.1
AT5G12430		TPR16	tetratricopeptide repeat 16, H...		Potri.009G050200 [exp]	7.74	0.8334

Compare expression of checked genes

Potri.002G111000 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.