Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G45540 3620 / 0 WD-40 repeat family protein / beige-related (.1.2) AT3G60920 1509 / 0 unknown protein AT1G58230 394 / 1e-109 binding (.1) AT1G03060 350 / 3e-96 SPI SPIRRIG, Beige/BEACH domain ;WD domain, G-beta repeat protein (.1) AT4G02660 347 / 3e-95 Beige/BEACH domain ;WD domain, G-beta repeat protein (.1) AT5G18525 104 / 1e-21 protein serine/threonine kinases;protein tyrosine kinases;ATP binding;protein kinases (.1) AT5G25150 47 / 0.0003 TAF5 TBP-associated factor 5 (.1) AT5G13840 45 / 0.0006 FZR3 FIZZY-related 3 (.1.2)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.014G072600 [exp] 4764 / 0 AT2G45540 3647 / 0.0 WD-40 repeat family protein / beige-related (.1.2) Potri.002G111000 [exp] 400 / 2e-111 AT1G58230 3474 / 0.0 binding (.1) Potri.005G215400 [exp] 348 / 1e-95 AT1G03060 5153 / 0.0 SPIRRIG, Beige/BEACH domain ;WD domain, G-beta repeat protein (.1) Potri.002G047700 [exp] 347 / 2e-95 AT1G03060 5063 / 0.0 SPIRRIG, Beige/BEACH domain ;WD domain, G-beta repeat protein (.1) Potri.010G153300 [exp] 100 / 3e-20 AT5G18525 1878 / 0.0 protein serine/threonine kinases;protein tyrosine kinases;ATP binding;protein kinases (.1) Potri.008G220800 [exp] 50 / 5e-05 AT3G06880 1115 / 0.0 Transducin/WD40 repeat-like superfamily protein (.1.2) Potri.001G470900 [exp] 45 / 0.0006 AT5G56130 586 / 0.0 Transducin/WD40 repeat-like superfamily protein (.1) Potri.008G057500 [exp] 45 / 0.001 AT5G13840 705 / 0.0 FIZZY-related 3 (.1.2)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10015857 [exp] 2645 / 0 AT2G45540 2610 / 0.0 WD-40 repeat family protein / beige-related (.1.2) Lus10009305 [exp] 2001 / 0 AT2G45540 1969 / 0.0 WD-40 repeat family protein / beige-related (.1.2) Lus10009307 [exp] 1451 / 0 AT2G45540 1420 / 0.0 WD-40 repeat family protein / beige-related (.1.2) Lus10015858 [exp] 1226 / 0 AT2G45540 1209 / 0.0 WD-40 repeat family protein / beige-related (.1.2) Lus10042866 [exp] 394 / 4e-110 AT1G58230 2871 / 0.0 binding (.1) Lus10028167 [exp] 377 / 2e-104 AT1G58230 3404 / 0.0 binding (.1) Lus10018744 [exp] 355 / 1e-98 AT1G03060 2581 / 0.0 SPIRRIG, Beige/BEACH domain ;WD domain, G-beta repeat protein (.1) Lus10024828 [exp] 340 / 5e-93 AT1G03060 4870 / 0.0 SPIRRIG, Beige/BEACH domain ;WD domain, G-beta repeat protein (.1) Lus10009306 [exp] 114 / 2e-28 AT3G60920 141 / 3e-39 unknown protein Lus10023903 [exp] 50 / 3e-05 AT3G21540 1223 / 0.0 transducin family protein / WD-40 repeat family protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0186 [poplar] [flax] Beta_propeller PF00400 [poplar] [flax] WD40 WD domain, G-beta repeat CL0186 [poplar] [flax] PF02138 [poplar] [flax] Beach Beige/BEACH domain CL0266 [poplar] [flax] PH PF14844 [poplar] [flax] PH_BEACH PH domain associated with Beige/BEACH
Representative CDS sequence Show only first row Show all	>Potri.002G150000.1 pacid=42779869 polypeptide=Potri.002G150000.1.p locus=Potri.002G150000 ID=Potri.002G150000.1.v4.1 annot-version=v4.1 ATGGAAGAAGAAGAAGAAAACAAGGAGATCGGAGAAAGTTGTGATGCTCAGGAAGTAGATAGTTTTGTAGAGGAAGGTAGGGTAGGAGAATCTCCTCAGG AGAATGTAAATGTGATTAGTCGTGGTCAAGAGGAGATAGAAAATGAAAATCTGGTTATGGATGGGGATGATTCTGTAGATACTGATGATGATGATCAGTT TGAACTGGTGTCTTTAAAAGATCAAGAAAAGAGTTTTGGTGAGTTTCCGGCTAATAATAACAATTCTAACCGGTCATCGAATTCAGAGAGTGAGAGATTC TCATTTGATAGGTTTGGAGAAATCTCTCCGAATTCATACAGTAATTATGGTGTTGAATATGATTCTTCCTCTGTCATGGAAATTCAACATGATCGCTCTG CATCGAGCCCTGGGCCTGAGACACAATTTGGTTATGCAATTAAGCAGTCACACTCGTCAACCAGTCTAGATTCTGGTTACTTTATTGATGGATTTTCTCC AACTGGTTCACCGCAAAAGGTTAAGCCAAAAGCTGCAATGCCAAATGTGTCCCCAGAGTTATTGCATTTGGTGGATTCAGCTATAATGGGAAAGCCTGAA AGCTTGGACAAGCTGAAGAACATTGTCAGTGGAGTTGAGAGTTTTGGAAGTGGAGGGGAAGCTGAGGGCATTGCTTACTTGGTTGTTGATTCCCTTTTGG CCACAATGGGTGGAGTTGAAAGTTTTGAGGATGAGGATCATAATCCTCCTAGTGTGATGCTGAACTCTAGGGCAGCCATTGTGGCAGGTGAGCTTATTCC TTGCCTTCCTTGGGTAGGTGACAGTGAGGTTTTCATGTCCCCTAGGACACGAATGGTGAGGGGGTTGCTCGCCATATTACGGGCTTGCACAAGAAACAGA GCCATGTGCTCTATGGCTGGTTTATTGGGAGTACTTTTGGGGACCGCAGAGAAAATCTTTGTTCAGGCTGGTGGGTTAACAGAACAGATGAAATGGGACG GGACTCCTTTATGCTATTGTCTCCAGTACCTAGCAGGTCATTCACTTAATGTTGTTGATTTGCATAGATGGTTGCAAGTAATTACAAGAACGCTTACTAC TTCATGGGCATATCGCTTAATGCTAGTGTTGGAGAAGGCAATGGGTGGAAAGGAGTCAAAGGGACCAGCATCTACTTTCGAGTTTGATGGTGAAAGCTCA GGTTTACTTGGTCCAGGAGAGAGTCGTTGGCCGTTTACCAATGGTTATGCATTTGCAACATGGATTTATATCGAATCATTTGCAGACACATTGAACACAG CTACTGCTGCAGCTGCTATTGCAGCTGCTGCAGCAGCCAAGTCAGGAAAATCATCTGCTATGTCAGCTGCAGCTGCTGCCAGTGCTCTTGCTGGTGAAGG GGCGACCCACATGCCTAGATTGTTCAGTTTCTTGTCTGCTGATAACCAGGGCATAGAGGCTTACTTTCATGCTCAGTTTTTGGTTGTTGAAAGTGGTAGC GGAAAGGGAAAGAAGGCATCTTTGCATTTCACTCATGCATTCAAGCCACAATGCTGGTACTTTATTGGTTTGGAGCATATTTACAAGCAGGGACTGATTG GGAAAACAGAGAGTGAACTGAGATTGTATATTGATGGATCCTTGTATGAAACTCGTCCTTTTGAGTTCCCTCGGATCTCCAAGCCACTAGCATTTTGCTG CATTGGGACAAACCCTCCTCCTACAATGGCTGGTTTACAACGACGTCGTAGGCAGTGTCCTTTGTTTGCTGAGATGGGGCCTGTTTATATCTTTAAGGAG CCAATTGGTCCTGAAAGGATGGCACGCTTAGCTTCCAGAGGAGGGGATGTGCTGCCTTGTTTTGGTAATGCCGCTGGGCTTCCTTGGCGAGCTACAAATG ACCACGTTCGAGCAATGGCAGAAGAAAGTTCACTTTTGGATGCAGAGATTGGAGGGTCAATTCACCTTCTCTATCACCCCAGTTTGCTTAGTGGGCGTTT CTGTCCCGATGCTTCTCCTTCTGGTGCTGCAGGCATGCTCCGACGGCCAGCTGAGGTTCTAGGACAAGTCCATGTTGCTACACGAATGCGACCAGTGGAG GCTTTGTGGGCGTTGGCTTATGGAGGCCCCATTTCCTTACTTCCTCTAGCGGTAAGCAGTGTGCATAAAGATAGTCTGGAACCAGAACAAGGAAATATTC CCATAACCTTTGCCACAGCTACTCTGGCTGCTCCAGTATTCCGAATAATTTCCATAGCTATTCAACATCCTGGGAACAATGAAGAATTGTGCCGCACTAG AGGGCCTGAGGTTCTCTCAAAAATCTTAAATTATCTTCTCCAAACTTTGTCTTCGTTGGATGCTGGGAATTGCAATGGTGTTGGAGATGAGGAACTTGTT GCAGCCATTGTTTCCCTATGCCAGTCCCAGAAGCATAATCATGCCCTCAAAGTGCAGCTTTTCACTACGCTGTTACTGGATCTGAGAATTTGGAGCTTGT GCAACTATGGATTGCAAAAGAAGCTTCTGTCCTCACTAGCAGACATGGTTTTCTCAGAGTCATTGGTGATGCGAGATGCCAATGCTATTCAGATGCTGCT TGATGGCTGCAGAAGATGTTATTGGACAGTTATCGAGAAGGATTCTGTGAATACGTTTTCATCGAAAGAGGCAACCCATCCAGTGGGTGAATTGAATGCT TTGGTTGATGAACTCTTAGTGATCATAGAACTTCTAATAGGAGCAGCATCTGCTGCAGTGGCCACAGATGACCTCCGTTGTCTGCTTGGGTTCATGGTTG ATTGCCCTCAACCTAATCAGGTTGCCAGAGTTTTGAATCTTATCTACAGGTTAGTCATACAACCAAATACAGCTAGAGCTCGTACGTTTGCAGAGTCATT CATAACATGTGGTGGTATAGAAACACTTCTTGTTCTGCTTCAGCGAGAAGCAAAAGCTGGTGAACATAGCATTCCAGAATCAGTGGCAAAGAGTGATGAT AGCTTACAAGTTCAAGAAACTGAACTAGATATTGGTAAGGGTACTTCAGAAAGAAGAATGAATGATGAAAAGGAAAAGGACTTGACTTCTCTGGATCAAG ATTATGAATCTGAACGTTTAGATAGTGGCGGTGGTGGCAGTCCTGCCACCTCTTCCCCTGGCATGAAAATTGAAAGGATGTCATCTGTTTCTGAAAACCC ATTTATTAAGAATTTGGGTGGTATAAGCCTTTCTATTAGTGCTGATAATGCAAGGAATAATGTTTACAATGTTGATAAAAGTGATGGCATTGTTGTTGCA ATCATTGGGCTAATAGGCGCTCTTGTAACTTCTGGTCATTTCAAGTTTGGTTCACATGCACCCTCTGATACTACTAGCACCTTTTTTGGTGGTGGCCTGC ATGATGGCAGCGGTACAATGTTTGATGATAAAGTTTCTCTACTACTTTTTGCACTACAGAAGGCTTTCCAAGCAGCGCCCAATAGGCTTATGACAACCAC TGTGTACACAGCTTTATTGGCAGCCTCGATTAATGCTTCTTCAACAGAGGAGGGGCTGAACTTTTATGATTCTGGACATCGCTTTGAACATTCACAACTT CTGTTGGTTCTGTTGCGGTCTCTGCCTTATGCATCTAGAGCCTTGCAAAGCCAAGCATTGCAGGATCTTCTGTTTTTGGCTTGCAGTCATCCAGAAAACA GAAGCAGTCTGACAAAAATGGAGGAATGGCCTGAGTGGCTTCTAGAGATTCTAATCTCTAATTATGAGATGAGTGCAACCAAAGATTCTAATGTGGCTAG CTTAGGAGACATAGAGGACCTCGTACACAACTTCTTGATTATAATGTTAGAGCACTCAATGCGCCAGAAGGATGGTTGGAAGGATATTGAAGCTACAATT CATTGTGCAGAATGGCTTTCTATTGTTGGGGGATCAAGCACAGGAGACCAACGAGTTAGACGCGAAGAATCACTGCCTGTATTTAAAAGAAGACTCTTGG GTGCATTGCTAGACTTTGCTGCAAGAGAATTGCAGGTTCAGACTCAAGTAATTGCAGCTGCAGCTGCTGGTGTTGCAGCTGAGGGTTTGCCACCAAAAGA TGCTAAGGTTGAAGCAGACAACGCTGCTCAGCTTTCGGTGGCTTTGGTTGAAAATGCTATTGTGATTTTAATGCTTGTTGAAGATCACTTACGATTACAA AGCAAACTTTCTTGTGCGTCACGTGTTGCTGATAGTTCACCATCTCCGCTTTCTCTTGTATCTCCCCTCAATAATCGCTCAAGTTCCCTTGGTGCGGATT CATTTGAAGCCTTGGGTGATCGCAGATCTAGTGACTCTGGGGGACTCCCTCTTGATGTCCTTGCTTCGATGGCTGATGCAAATGGGCAAATTTCTGCGAG TGTGATGGAACGTCTTACCGCAGCAGCAGCAGCTGAGCCTTATGAATCTGTTTTATGTGCTTTTGTTTCGTATGGGAGCTGTATGATGGATTTGGCTGAG GGTTGGAAATTTAGGAGCAGACTGTGGTATGGTGTTGGCATGTCTTCAAAAACAGCTCCCTTTGGTGGTGGTGGAAGTGGATGGGAATCTTGGAGGTCTA CTTTAGAAAAAGATGCAAATGGAAACTGGATTGAACTTCCTTTGGTTAAAAAGTCAGTTGCCATGCTTCAAGCTCTGTTATTAGACGAGTCTGGACTTGG TGGTGGTCTTGGTATAGGTGGAGGATCTGGTACTGGAATGGGTGGAATGGCGGCACTATATCAGCTATTGGATAGCGACCAACCATTTCTATGCATGCTC CGTATGGTGCTTCTGTCTATGAGAGAGGAGGACAATGGGGAGACCAGTTTGCTCATGAGAAATGTAAGCATGGACGATGGGATGTCAGAAGGATTTGACC GACAAGCTGGCAACATCATGTGTTTAGAAAACAGTGCTCGAATGCCTATGAGACAACCACGATCAGCTTTGCTGTGGAGTGTGCTTTCACCTGTTCTGAA CATGCCAATTTCTGATTCAAAACGACAGAGAGTGTTGGTTGCGTCTTGTGTTCTTTACTCTGAGGTATGGCATGCTGTTGGCAGAGACAGGAAACCCCTC CGTAAACAGTACCTTGAGGGTATCTTACCACCATTTGTTGCTGTATTGAGGAGGTGGCGGCCCCTTCTTGCTGGAATTCATGAGCTTGCAACTGCTGATG GTTTAAATCCTCTTGTTGTTGATGATCGTGCATTAGCTGCTGATGCACTACAAATAGAGGCTGCTCTCTGCATGATTTCTCCCGCTTGGGCAGCTGCTTT TGCATCACCACCAGCTGCAATGGCATTGGCAATGATTGCTGCTGGTGCTGCAGGTGGAGAAACCCCTGCTCCTGCAACAACTACACATCTTAGGCGTGAC TCTTCCTTGCTGGAGCGAAAAACTGCTAGATTACATACCTTCTCAAGCTTTCAAAAGCCTTTGGAAGTGCCTAACAAAACACCAGCTCATCCTAAGGATA AGGCTGCTGCAAAAGCTGCTGCGTTGGCAGCTGCGCGTGATCTTCAACGTAATGCTAAGATTGGTTCTGGACGGGGCCTTAGTGCTGTTGCAATGGCCAC GTCTGCACAGAGAAGAAATGCTAGTGATATGGAGCGTGTTAGGAGATGGAATATTGCTGAAGCCATGGGAGTTGCATGGATGGAATGCTTACAACCAGCT GACACAAGATCAGTCTATGGGAAAGATTTCAATGCTCTATCCTATAAATTTATTGCAGTCCTTGTTGCTAGCTTTGCTTTAGCAAGAAACATGCAACGAT TAGAGGTTGACAGGCGTGCTCAAGTTGATGTTATATCTCGTCATCGTTTATCCAGTGGAATTCATGCTTGGCGCAGACTTATACATTGCTTGATAGAGAT GAAGAGTCTTTTCGGGCCCTTTGGGGACTCCTTGTGCAATCCTGAACGTGTTTTCTGGAAGCTAGATTTTATGGAAACTTCTTCAAGAATGAGAAGATGT TTGAGGAGGAATTATAAAGGGTCTGATCATTTTGGTGCTGCTGCTAATTATGAGGATCAAATTGAGATAAAGCATGATAAAGGAAATGTTCCTGTTCTGG CAGCAGAAGCAATCTCAGTGGAGGGACTAAATGAAGATGGGGAACGTACAGAAATTGAGAATTTTGATGGTAGATCCTTTGATACTGAGCAGAGTGGGGA GAGTCAGCTGAGCCTGTCTGGAGCAACTGATCAAAATATGCAGCCTCCAGCTGAACCTAATGACATTCAGCTTGCCAGGGACCAAGACTTGGAAAATGCA TCTGCAGTTGCACCAGGTTATGTACCCAGTGAACTTGATGAAAGAATCATTCTTGAACTTCCTTCATCTATGGTCCGGCCGCTGACAGTTATGCGAGGAA CATTTCAAGTAACTACTAGGAGAATAAACTTTATAGTTAATACCACTGAGAGCAATGCTGATGGAATGGAATCTTCTGAATCGGGAGTCCAAGAAAAGGA TCACAGTTGGCTGATGTCTTCCCTCCATCAGATTTATAGCCGGCGGTATTTGCTAAGAAGAAGTGCTCTGGAATTGTTTATGATTGACCGATCGAACTTC TTCTTTGATTTCGGGAGTACTGAGGCACGGAGAAATGCTTACCGAGCTATAGTTCAATCAAGACCTCCTCATTTGAACAATATTTATCTGGCTACTCAGA GACCTGAGCAACTTCTGAAGAGAACTCAACTTATGGAACGTTGGGCAAGGTGGGAGATTAGCAACTTTGAGTATCTAATGCAACTCAATACTCTGGCTGG GCGTAGTTATAATGACATCACTCAGTATCCAGTTTTTCCATGGGTTCTTTCCGATTACAGTTCAAAAAGTTTGGATCTTTCTGATGCTTCTTCTTATCGA GATCTTTCAAAGCCTGTTGGTGCTTTGAATCCTGATCGGCTGAAAAAGTTCCAGGAGAGATATTCTAGCTTTGATGATCCAGTCATTCCAAAATTCCATT ATGGTTCTCATTACTCAAGTGCAGGGACAGTTTTATATTATCTTGTTAGAGTTGAACCGTTTACAACGCTTTCAATTCAATTGCAAGGTGGAAAATTCGA TCATGCAGATCGGATGTTTTCAGATATTGCTGCTACCTGGAATGGAGTTACTGAAGACATGAGTGATGTGAAGGAATTGGTTCCTGAGCTGTTTTATCTT CCCGAGATCTTAACCAATGAAAATTCAATCGACTTTGGTACAACACAGTTGGGTGGAAAGCTTGATTCTGTGAAACTTCCTCCTTGGGCTGAAAATACTA CTGATTTTATTCATAAGCATCAGATGGCTCTTGAAAGTGAGCATGTATCTGCACATTTGCATGAATGGATTGATCTCATATTCGGCTTTAAGCAACGTGG TAAAGAAGCTATAGCTGCAAACAATGTTTTCTTTTACATCACCTATGAAGGGGCGGTTGATATTGACAAGATTTCAGATCCAGCACAACAACATGCCACA CAAGACCAGATTGCATACTTTGGACAGACTCCATCCCAACTTCTGACTGCTCCTCACTTGAAGAGGATGCCCTTAGCTGATGTTCTTCACTTGCAGACTA TCTTCAGGAACCCAAAAGAAGTCAAACCATATGCTGTTCCAGCCCCAGAACGCTGCAATCTACCTGCAGCTTCCATTCATGCATCTTCAGATGCTGTCAT AATTGTTGATATAAATGCACCAGCAGCACATATTGCCCAGCACAAGTGGCAACCCAACACGCCAGATGGCCAAGGCACACCTTTCCTCTTCCAACATGGA AAGGCCTTAACAAGCTCTGCTGGTGGAACATTCATGCGAATGTTTAAAGGGCAGTCTGTGTCTGGTGGAGATGAGTGGCATTTTCCCCAAGCACTTGCAT TTGCTTCATCTGGGATTAGAAGCAAAGCGGTGGTTTCCATCACTCATGACAAAGAAATAATTACTGGTGGACATGCAGATAATAGTATCAAGCTAATATC AGCAGATAGTGCAAAAACCCTAGAAACTGCCATTGCACATTGTGCTCCAGTCACTTGCCTTGCTCTTTCTCCAGATGGCAACTATCTTGTCACGGGATCA CGGGACACTACTGTACTACTCTGGAAGATGCATAGAGCTTTCACTTCGAGCTCAAGTAGTATCTCAGATCCTTCCACAGGCACCGGAACCCCACCTGCAG CCGGTAGCACTCTAGCAACTAACCTGGCAGAAAAAAGTAGGTGGCGTCGTATTGAGGGTCCGATACATGTCCTTCGTGGTCACCACAGAGAAATACTGTG TTGTTGTGTCAGTTCAGATCTTGGGATCGTTGTTTCTTGCTCCCAATCATCAGATGTGCTGTTGCATTCTATAAGAAGGGGTCGTTTGATCAGAAGGCTG TTTGGTGTGGAGGCCCATTCTGTTTTTCTTTCATCCGAGGGGGTTGTAATGACTTGGAACAAATGTCAAAATTCTCTAAACACCTATACTCTTAACGGGA TACTAATTGCTAGAGCACAACTTCCTTTATCTGGCAGTGTTAGTTGCATTGAAATATCTGTGGATGGGAAGTGTGCTTTGATTGGCATGAACTCATGTCC AGAAAATCATGGATCCTCTAATAACAGCCAAAACTTAAGCTTAAAAAAGACAGGGGCTGCAGATTTTGATCTAGAATCAGTGGACACTGGTGAAGATAAC AGATTAGATGTTCCTGCCCCGTCGATTTGTTTCCTGGATCTCTATACACTAAAGGTATTTCATGTTCTGAAACTTGGAGAAGGCCAGGATATTACTGCTC TGGCTTTAAACAATGATAGCACAAATCTCGTGGTATCAACTGCAGATAAGCAGTTGATAATCTTCACTGATCCTGCTTTGAGCTTGAAAGTGGTCGATCA GATGCTCAAGCTTGGTTGGGAAGGCGACGGACTGAGCCCACTTATAAAATCGTAG
AA sequence Show only first row Show all	>Potri.002G150000.1 pacid=42779869 polypeptide=Potri.002G150000.1.p locus=Potri.002G150000 ID=Potri.002G150000.1.v4.1 annot-version=v4.1 MEEEEENKEIGESCDAQEVDSFVEEGRVGESPQENVNVISRGQEEIENENLVMDGDDSVDTDDDDQFELVSLKDQEKSFGEFPANNNNSNRSSNSESERF SFDRFGEISPNSYSNYGVEYDSSSVMEIQHDRSASSPGPETQFGYAIKQSHSSTSLDSGYFIDGFSPTGSPQKVKPKAAMPNVSPELLHLVDSAIMGKPE SLDKLKNIVSGVESFGSGGEAEGIAYLVVDSLLATMGGVESFEDEDHNPPSVMLNSRAAIVAGELIPCLPWVGDSEVFMSPRTRMVRGLLAILRACTRNR AMCSMAGLLGVLLGTAEKIFVQAGGLTEQMKWDGTPLCYCLQYLAGHSLNVVDLHRWLQVITRTLTTSWAYRLMLVLEKAMGGKESKGPASTFEFDGESS GLLGPGESRWPFTNGYAFATWIYIESFADTLNTATAAAAIAAAAAAKSGKSSAMSAAAAASALAGEGATHMPRLFSFLSADNQGIEAYFHAQFLVVESGS GKGKKASLHFTHAFKPQCWYFIGLEHIYKQGLIGKTESELRLYIDGSLYETRPFEFPRISKPLAFCCIGTNPPPTMAGLQRRRRQCPLFAEMGPVYIFKE PIGPERMARLASRGGDVLPCFGNAAGLPWRATNDHVRAMAEESSLLDAEIGGSIHLLYHPSLLSGRFCPDASPSGAAGMLRRPAEVLGQVHVATRMRPVE ALWALAYGGPISLLPLAVSSVHKDSLEPEQGNIPITFATATLAAPVFRIISIAIQHPGNNEELCRTRGPEVLSKILNYLLQTLSSLDAGNCNGVGDEELV AAIVSLCQSQKHNHALKVQLFTTLLLDLRIWSLCNYGLQKKLLSSLADMVFSESLVMRDANAIQMLLDGCRRCYWTVIEKDSVNTFSSKEATHPVGELNA LVDELLVIIELLIGAASAAVATDDLRCLLGFMVDCPQPNQVARVLNLIYRLVIQPNTARARTFAESFITCGGIETLLVLLQREAKAGEHSIPESVAKSDD SLQVQETELDIGKGTSERRMNDEKEKDLTSLDQDYESERLDSGGGGSPATSSPGMKIERMSSVSENPFIKNLGGISLSISADNARNNVYNVDKSDGIVVA IIGLIGALVTSGHFKFGSHAPSDTTSTFFGGGLHDGSGTMFDDKVSLLLFALQKAFQAAPNRLMTTTVYTALLAASINASSTEEGLNFYDSGHRFEHSQL LLVLLRSLPYASRALQSQALQDLLFLACSHPENRSSLTKMEEWPEWLLEILISNYEMSATKDSNVASLGDIEDLVHNFLIIMLEHSMRQKDGWKDIEATI HCAEWLSIVGGSSTGDQRVRREESLPVFKRRLLGALLDFAARELQVQTQVIAAAAAGVAAEGLPPKDAKVEADNAAQLSVALVENAIVILMLVEDHLRLQ SKLSCASRVADSSPSPLSLVSPLNNRSSSLGADSFEALGDRRSSDSGGLPLDVLASMADANGQISASVMERLTAAAAAEPYESVLCAFVSYGSCMMDLAE GWKFRSRLWYGVGMSSKTAPFGGGGSGWESWRSTLEKDANGNWIELPLVKKSVAMLQALLLDESGLGGGLGIGGGSGTGMGGMAALYQLLDSDQPFLCML RMVLLSMREEDNGETSLLMRNVSMDDGMSEGFDRQAGNIMCLENSARMPMRQPRSALLWSVLSPVLNMPISDSKRQRVLVASCVLYSEVWHAVGRDRKPL RKQYLEGILPPFVAVLRRWRPLLAGIHELATADGLNPLVVDDRALAADALQIEAALCMISPAWAAAFASPPAAMALAMIAAGAAGGETPAPATTTHLRRD SSLLERKTARLHTFSSFQKPLEVPNKTPAHPKDKAAAKAAALAAARDLQRNAKIGSGRGLSAVAMATSAQRRNASDMERVRRWNIAEAMGVAWMECLQPA DTRSVYGKDFNALSYKFIAVLVASFALARNMQRLEVDRRAQVDVISRHRLSSGIHAWRRLIHCLIEMKSLFGPFGDSLCNPERVFWKLDFMETSSRMRRC LRRNYKGSDHFGAAANYEDQIEIKHDKGNVPVLAAEAISVEGLNEDGERTEIENFDGRSFDTEQSGESQLSLSGATDQNMQPPAEPNDIQLARDQDLENA SAVAPGYVPSELDERIILELPSSMVRPLTVMRGTFQVTTRRINFIVNTTESNADGMESSESGVQEKDHSWLMSSLHQIYSRRYLLRRSALELFMIDRSNF FFDFGSTEARRNAYRAIVQSRPPHLNNIYLATQRPEQLLKRTQLMERWARWEISNFEYLMQLNTLAGRSYNDITQYPVFPWVLSDYSSKSLDLSDASSYR DLSKPVGALNPDRLKKFQERYSSFDDPVIPKFHYGSHYSSAGTVLYYLVRVEPFTTLSIQLQGGKFDHADRMFSDIAATWNGVTEDMSDVKELVPELFYL PEILTNENSIDFGTTQLGGKLDSVKLPPWAENTTDFIHKHQMALESEHVSAHLHEWIDLIFGFKQRGKEAIAANNVFFYITYEGAVDIDKISDPAQQHAT QDQIAYFGQTPSQLLTAPHLKRMPLADVLHLQTIFRNPKEVKPYAVPAPERCNLPAASIHASSDAVIIVDINAPAAHIAQHKWQPNTPDGQGTPFLFQHG KALTSSAGGTFMRMFKGQSVSGGDEWHFPQALAFASSGIRSKAVVSITHDKEIITGGHADNSIKLISADSAKTLETAIAHCAPVTCLALSPDGNYLVTGS RDTTVLLWKMHRAFTSSSSSISDPSTGTGTPPAAGSTLATNLAEKSRWRRIEGPIHVLRGHHREILCCCVSSDLGIVVSCSQSSDVLLHSIRRGRLIRRL FGVEAHSVFLSSEGVVMTWNKCQNSLNTYTLNGILIARAQLPLSGSVSCIEISVDGKCALIGMNSCPENHGSSNNSQNLSLKKTGAADFDLESVDTGEDN RLDVPAPSICFLDLYTLKVFHVLKLGEGQDITALALNNDSTNLVVSTADKQLIIFTDPALSLKVVDQMLKLGWEGDGLSPLIKS

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT2G45540			WD-40 repeat family protein / ...		Potri.002G150000 [exp]	0	1
AT5G20490		XI-17, ATXIK, X...	MYOSIN XI-17, MYOSIN XI K, Myo...		Potri.006G145700 [exp]	1.00	0.9110
AT3G60860			SEC7-like guanine nucleotide e...		Potri.014G070600 [exp]	2.00	0.8890
AT2G35630		GEM1, MOR1	MICROTUBULE ORGANIZATION 1, AR...		Potri.011G153700 [exp]	3.46	0.8971	Pt-MOR1.1
AT5G65930		PKCBP, ZWI	POTATO KINESIN-LIKE CALMODULIN...		Potri.001G455300 [exp]	3.74	0.8820
AT2G45540			WD-40 repeat family protein / ...		Potri.014G072600 [exp]	4.12	0.8614
AT4G38200			SEC7-like guanine nucleotide e...		Potri.004G208400 [exp]	4.47	0.8988
AT5G04930		ALA1	aminophospholipid ATPase 1 (.1...		Potri.016G138000 [exp]	6.48	0.8523
AT1G12470			zinc ion binding (.1)		Potri.013G147600 [exp]	7.68	0.8222
AT5G47490			RGPR-related (.1)		Potri.003G077100 [exp]	9.16	0.8429
AT2G35110		NAPP, GRL, NAP1	NCK-ASSOCIATED PROTEIN 1, GNAR...		Potri.015G123900 [exp]	10.95	0.8699

Compare expression of checked genes

Potri.002G150000 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.