Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol	BAP2.1
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G45760 120 / 2e-34 BAL, BAP2 BON ASSOCIATION PROTEIN 1-LIKE, BON association protein 2 (.1) AT3G61190 108 / 5e-30 BAP1 BON association protein 1 (.1.2) AT2G13350 56 / 3e-09 Calcium-dependent lipid-binding (CaLB domain) family protein (.1) AT4G15755 48 / 8e-07 Calcium-dependent lipid-binding (CaLB domain) family protein (.1) AT1G04540 48 / 2e-06 Calcium-dependent lipid-binding (CaLB domain) family protein (.1) AT2G33320 45 / 7e-06 Calcium-dependent lipid-binding (CaLB domain) family protein (.1) AT3G57880 44 / 3e-05 Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein (.1) AT3G04360 43 / 4e-05 Calcium-dependent lipid-binding (CaLB domain) family protein (.1) AT4G35790 43 / 5e-05 ATPLDDELTA ARABIDOPSIS THALIANA PHOSPHOLIPASE D DELTA, phospholipase D delta (.1.2.3) AT1G51570 42 / 8e-05 Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.014G078700 [exp] 311 / 8e-110 AT2G45760 116 / 1e-32 BON ASSOCIATION PROTEIN 1-LIKE, BON association protein 2 (.1) Potri.014G078600 [exp] 155 / 2e-48 AT2G45760 105 / 2e-28 BON ASSOCIATION PROTEIN 1-LIKE, BON association protein 2 (.1) Potri.010G024200 [exp] 64 / 2e-12 AT3G16510 135 / 5e-37 Calcium-dependent lipid-binding (CaLB domain) family protein (.1) Potri.001G070400 [exp] 60 / 6e-11 AT3G16510 82 / 4e-17 Calcium-dependent lipid-binding (CaLB domain) family protein (.1) Potri.003G160400 [exp] 57 / 5e-10 AT3G16510 72 / 8e-14 Calcium-dependent lipid-binding (CaLB domain) family protein (.1) Potri.013G048400 [exp] 53 / 3e-08 AT2G33320 211 / 6e-63 Calcium-dependent lipid-binding (CaLB domain) family protein (.1) Potri.019G021300 [exp] 52 / 6e-08 AT3G04360 213 / 2e-65 Calcium-dependent lipid-binding (CaLB domain) family protein (.1) Potri.008G209800 [exp] 52 / 6e-08 AT3G16510 137 / 8e-38 Calcium-dependent lipid-binding (CaLB domain) family protein (.1) Potri.008G064900 [exp] 49 / 4e-07 AT1G07310 150 / 1e-42 Calcium-dependent lipid-binding (CaLB domain) family protein (.1)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10036571 [exp] 159 / 1e-49 AT2G45760 105 / 2e-28 BON ASSOCIATION PROTEIN 1-LIKE, BON association protein 2 (.1) Lus10040923 [exp] 152 / 9e-47 AT2G45760 110 / 4e-30 BON ASSOCIATION PROTEIN 1-LIKE, BON association protein 2 (.1) Lus10009818 [exp] 137 / 1e-40 AT2G45760 120 / 6e-34 BON ASSOCIATION PROTEIN 1-LIKE, BON association protein 2 (.1) Lus10040924 [exp] 134 / 8e-40 AT2G45760 119 / 3e-33 BON ASSOCIATION PROTEIN 1-LIKE, BON association protein 2 (.1) Lus10004500 [exp] 56 / 2e-09 AT1G09070 179 / 2e-55 soybean gene regulated by cold-2 (.1) Lus10029901 [exp] 52 / 3e-08 AT1G09070 172 / 6e-52 soybean gene regulated by cold-2 (.1) Lus10003570 [exp] 50 / 3e-07 AT2G33320 222 / 7e-67 Calcium-dependent lipid-binding (CaLB domain) family protein (.1) Lus10032780 [exp] 49 / 6e-07 AT2G33320 227 / 1e-70 Calcium-dependent lipid-binding (CaLB domain) family protein (.1) Lus10014466 [exp] 48 / 1e-06 AT1G04540 245 / 7e-76 Calcium-dependent lipid-binding (CaLB domain) family protein (.1) Lus10024505 [exp] 46 / 3e-06 AT2G45760 58 / 3e-10 BON ASSOCIATION PROTEIN 1-LIKE, BON association protein 2 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0154 [poplar] [flax] C2 PF00168 [poplar] [flax] C2 C2 domain
Representative CDS sequence Show only first row Show all	>Potri.002G155300.1 pacid=42779512 polypeptide=Potri.002G155300.1.p locus=Potri.002G155300 ID=Potri.002G155300.1.v4.1 annot-version=v4.1 ATGGACAAGGGTCACAAGGCTTCTCGCACTATAGAAATCACTATCTTATCAGCAGAAAACCTAAGCCTCGATCGCAAATCCGTGAAGAAGAATGCATACG TTATTGCTAGAATCGACCCTATTAACTATGGATCAACTAAAGCTGATTTTGAAGGAGGCTGTAACCCTTCATGGAACGAGAAGCTTACCCTAGACATGCC ATTTCAGACTCGTTTTATAACCCTTGAAGTGAAATGCAAGACTAGCTCAGGTGACAGAGTTGTTGGCACAGCAAGCCTTCCAATTTCTGACATATCGGGT GATTATACACCGGAGAGTCACTTACATTTCTTGAGTTACCGGTTAAGGGATTCCAGAGGTGAGAAGAATGGTATTATTAATGTCTCGGCAAGAGTTAAGG TGCAGGTAGAGTCCATGAGTCCGGCAGTGACAAAGAATCCGATGAGGAATGGGTGCTCATCGTCGTGGCAGCAGCCTACGCTGGGGGTGCCTGCTGGTCA CCAGAAGAGATATTACGGTGGAGTTGTGACTGGGGTTCCTGTTTGGAGTTAA
AA sequence Show only first row Show all	>Potri.002G155300.1 pacid=42779512 polypeptide=Potri.002G155300.1.p locus=Potri.002G155300 ID=Potri.002G155300.1.v4.1 annot-version=v4.1 MDKGHKASRTIEITILSAENLSLDRKSVKKNAYVIARIDPINYGSTKADFEGGCNPSWNEKLTLDMPFQTRFITLEVKCKTSSGDRVVGTASLPISDISG DYTPESHLHFLSYRLRDSRGEKNGIINVSARVKVQVESMSPAVTKNPMRNGCSSSWQQPTLGVPAGHQKRYYGGVVTGVPVWS

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT2G45760		BAL, BAP2	BON ASSOCIATION PROTEIN 1-LIKE...		Potri.002G155300 [exp]	0	1	BAP2.1
					Potri.002G101600 [exp]	1.41	0.9536
AT2G01670		ATNUDT17	nudix hydrolase homolog 17 (.1...		Potri.008G134000 [exp]	2.82	0.9484
AT1G76490		HMGR1, HMG1, At...	3-HYDROXY-3-METHYLGLUTARYL COA...		Potri.004G208500 [exp]	3.46	0.9516	HMGR3.4
					Potri.001G203400 [exp]	5.38	0.9569
					Potri.010G150750 [exp]	8.36	0.9429
					Potri.001G202800 [exp]	8.48	0.9364
AT3G23230	AP2_ERF	ERF98	Integrase-type DNA-binding sup...		Potri.005G223100 [exp]	9.00	0.9351
AT5G12340			unknown protein		Potri.009G071100 [exp]	9.16	0.9432
AT2G41180		SIB2	sigma factor binding protein 2...		Potri.019G013300 [exp]	10.95	0.9277
					Potri.001G203300 [exp]	12.72	0.9274

Compare expression of checked genes

Potri.002G155300 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.