Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol	SIN1.1,DCL902
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G01040 2836 / 0 SIN1, EMB76, EMB60, CAF, ASU1, SUS1, DCL1, ATDCL1 SHORT INTEGUMENTS 1, EMBRYO DEFECTIVE 76, EMBRYO DEFECTIVE 60, CARPEL FACTORY, ABNORMAL SUSPENSOR 1, dicer-like 1 (.1.2) AT3G43920 383 / 9e-109 DCL3, ATDCL3 dicer-like 3 (.1.2.3) AT3G03300 359 / 1e-101 ATDCL2, DCL2 dicer-like 2 (.1.2.3) AT5G20320 306 / 9e-84 DCL4, ATDCL4 dicer-like 4 (.1.2) AT3G20420 174 / 8e-47 RTL2, ATRTL2 RNASEIII-LIKE 2, RNAse THREE-like protein 2 (.1) AT4G15417 154 / 1e-41 ATRTL1 RNAse II-like 1 (.1) AT5G45150 123 / 8e-28 RTL3 RNAse THREE-like protein 3 (.1) AT1G35530 60 / 3e-08 DEAD/DEAH box RNA helicase family protein (.1.2) AT5G11200 52 / 5e-06 DEAD/DEAH box RNA helicase family protein (.1.2.3) AT5G11170 51 / 6e-06 DEAD/DEAH box RNA helicase family protein (.1.2)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.018G047500 [exp] 772 / 0 AT3G43920 1518 / 0.0 dicer-like 3 (.1.2.3) Potri.010G181400 [exp] 375 / 9e-107 AT3G03300 1548 / 0.0 dicer-like 2 (.1.2.3) Potri.008G075900 [exp] 373 / 6e-106 AT3G03300 1567 / 0.0 dicer-like 2 (.1.2.3) Potri.006G188800 [exp] 327 / 2e-90 AT5G20320 1733 / 0.0 dicer-like 4 (.1.2) Potri.011G086700 [exp] 191 / 2e-53 AT3G20420 356 / 9e-122 RNASEIII-LIKE 2, RNAse THREE-like protein 2 (.1) Potri.002G226700 [exp] 189 / 5e-53 AT4G15417 244 / 1e-80 RNAse II-like 1 (.1) Potri.013G109600 [exp] 60 / 2e-08 AT1G35530 1234 / 0.0 DEAD/DEAH box RNA helicase family protein (.1.2) Potri.013G110200 [exp] 49 / 2e-05 AT1G35530 0 / 1 DEAD/DEAH box RNA helicase family protein (.1.2) Potri.018G028600 [exp] 49 / 3e-05 AT5G11170 807 / 0.0 DEAD/DEAH box RNA helicase family protein (.1.2)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10005142 [exp] 2009 / 0 AT1G01040 2012 / 0.0 SHORT INTEGUMENTS 1, EMBRYO DEFECTIVE 76, EMBRYO DEFECTIVE 60, CARPEL FACTORY, ABNORMAL SUSPENSOR 1, dicer-like 1 (.1.2) Lus10030177 [exp] 1190 / 0 AT1G01040 1138 / 0.0 SHORT INTEGUMENTS 1, EMBRYO DEFECTIVE 76, EMBRYO DEFECTIVE 60, CARPEL FACTORY, ABNORMAL SUSPENSOR 1, dicer-like 1 (.1.2) Lus10030176 [exp] 1062 / 0 AT1G01040 972 / 0.0 SHORT INTEGUMENTS 1, EMBRYO DEFECTIVE 76, EMBRYO DEFECTIVE 60, CARPEL FACTORY, ABNORMAL SUSPENSOR 1, dicer-like 1 (.1.2) Lus10005141 [exp] 603 / 0 AT1G01040 569 / 0.0 SHORT INTEGUMENTS 1, EMBRYO DEFECTIVE 76, EMBRYO DEFECTIVE 60, CARPEL FACTORY, ABNORMAL SUSPENSOR 1, dicer-like 1 (.1.2) Lus10016367 [exp] 387 / 3e-109 AT3G43920 1457 / 0.0 dicer-like 3 (.1.2.3) Lus10019757 [exp] 375 / 1e-105 AT3G43920 1379 / 0.0 dicer-like 3 (.1.2.3) Lus10036447 [exp] 329 / 5e-92 AT3G03300 1405 / 0.0 dicer-like 2 (.1.2.3) Lus10019587 [exp] 200 / 3e-54 AT5G20320 556 / 0.0 dicer-like 4 (.1.2) Lus10019588 [exp] 183 / 3e-46 AT5G20320 1152 / 0.0 dicer-like 4 (.1.2) Lus10000182 [exp] 160 / 4e-43 AT4G15417 230 / 5e-75 RNAse II-like 1 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0023 [poplar] [flax] P-loop_NTPase PF00271 [poplar] [flax] Helicase_C Helicase conserved C-terminal domain CL0539 [poplar] [flax] RNase_III PF00636 [poplar] [flax] Ribonuclease_3 Ribonuclease III domain CL0638 [poplar] [flax] PAZ PF02170 [poplar] [flax] PAZ PAZ domain CL0196 [poplar] [flax] DSRM PF03368 [poplar] [flax] Dicer_dimer Dicer dimerisation domain CL0196 [poplar] [flax] DSRM PF14709 [poplar] [flax] DND1_DSRM double strand RNA binding domain from DEAD END PROTEIN 1
Representative CDS sequence Show only first row Show all	>Potri.002G181400.1 pacid=42779272 polypeptide=Potri.002G181400.1.p locus=Potri.002G181400 ID=Potri.002G181400.1.v4.1 annot-version=v4.1 ATGGAGAGCGAGAGTAATGGTAGGGTTTCGGGGATTGGAGGTGGAGGTGGTCCGTCTTACTGGCTTGATGCATGTGAGGATATTTCTTGTGATATTATAG ATGATTTTGTTGATTTTGATACTTCAATTGTTCCAGAATTATCTGTTGATAATAATTCCAATGTTAATAATGATTTCTTTGGAGGGATTGATCACATTCT TGATAGTATCAAGAATGGTAGTGGTCTTCCTCCTCTTCATAATGCTAGTACGACAGCTAATGTTTCCAATGGAAATCGGGATTGCATTGTTGGTGATGGT TGGTTTATTAATGTTGAAAATGGAGTTTGCCATGGGAGCTCGGTTTCACAATCAAATGGTGGTGATAAGGACAATATTGACAGAAAAGGGCAGGTGGAGA ATGGTGGTAATGGGTTGAATTTGTCCAATGGGAAGAGAGAAGAGAGGTTCTCAAACAATTTTGTTAAAGAAAATGGGAAGAAGGATGAGCAGTCGACGGA GCAAGGTATTGATGGTGATGAAAGGTGCGGTAAAAGGGCTAGACTTTGTTGTTATAGAAATGAGAGAGTGTATTCTAGTAGAGGGCAGCATGAGCATAGG GATAGGGAGAGATGTTCTAGCAGGAAGAGGTCACGGGATTGGGATGAAAGCGATAGAAGGGATAGGGATATTAGTCGAAGAAGAGATAGATATAGTGGTA GTAATAGGAGGGATGGTAGAGATAGGGATTGGAGGGAAAGAGAACTTAGGGGTTATTGGGAGAGGGATCGTTCAGGGTCCAAAGACATGGTTTTCCGATT GGGCACTTGGGAAGCTGATCATAACAAAGAAGGAAGGGAGGCAAATGACAAAATTCAGGAGTGCAAAGGAGAGCTAGAGAAGAAATCAGAGGAGAGTAAA GAGAAAGTCCCTGAAGAACAGGCCCGCCAGTATCAATTGGATGTTCTTGACCAGGCTAAGAAGAAAAATACAATAGCTTTTCTTGAAACAGGGGCAGGGA AGACACTCATTGCTGTACTCCTCATCAGAAGCATTTGCAATGACTTGCAAAGGCAGAATAAAAAAATTCTAGCTGTATTTTTAGTTCCGAAGGTTCCACT TGTTTATCAGCAAGCAGAAGTTATTCGTGAGCGCGGTTACCAAGTGGGCCATTATTGTGGTGAGATGGGTCAAGATTTCTGGGATACTCGAAGATGGCAG CGTGAGTTTGAAACAAAACAGGTTTTAGTAATGACAGCCCAAATTCTTTTGAACATTCTGAGGCACAGCATAATCAAAATGGAAGCCATAAATCTCCTCA TTCTGGATGAGTGTCATCATGCTGTGAAGAAACATCCATATTCTCTTGTGATGTCTGAGTTTTACCATACGACTCCCAAGGAGAAGAGACCGTCTGTTTT TGGAATGACAGCTTCTCCTGTTAACTTAAAGGGTGTTTCAAGTCAGGTGGATTGTGCAATAAAGATCCGCAATCTTGAAAGTAAACTGGACTCAATTGTT TGTACGATAAAAGACCGCAAGGAACTGGAAAAGCATGTACCAATGCCGGCAGAGGTTGTGGTGGAGTACGACAAAGCAGCTAGCTTGTGGTCCCTTCATG AACAAATAAAGCAAATCGAAGCAGCTGTTGAGGAAGCTGCACAGTCTAGCTCGAGAAGAAGTAAATGGCAATTTATGGGAGCTAGGGATGCTGGGGCCAA GGAAGAGCTGCGCCAGGTTTATGGTGTCTCTGAAAGAACAGAAAGTGATGGGGCTGCTAACTTAATTCAAAAGTTGAGGGCAATTAATTATGCACTTGGT GATCTGGGTCAGTGGTGTGCTTACAAGGTTGCACAATCCTTTCTGACTGCCTTACAAAATGACGAGAGAGCAAACTATCAGCTTGATGTTAAGTTTCAAG AATCCTACCTCGAAAGAGTCGTGTTGCTCTTACAATGCCAATTAACAGAGGGAGCTGTTACAGACAAGGATACAAAAGTTTCAGACAATGGGAATGACAA TATTCAGGATGGGCCTGGTTTTGATGAGATTGAGGAGGGAGAGCTCCCTGACAGTCATGTTGTCTCTGGTGGAGAACATGTTGATGTGATAATAGGAGCT GCTGTAGCTGATGGAAAAGTGACCCCTAAAGTGCAGTCACTGATTAAAGTACTTCTCAGATATCAGCACACGGAGGATTTTCGTGCGATCATCTTTGTTG AGCGCGTAGTAGCTGCTTTGGTTCTTCCTAAGGTCTTTGCAGAGCTTCCATCTCTAAGTTTTGTTAGGTGTGCAAGTTTGATAGGGCACAATAATAGTCA GGAAATGAGAACAAGCCAAATGCAAGACACAATTGCCAAATTTCGAGATGGTCGTGTGACATTGTTAGTTGCTACCAGTGTTGCTGAGGAAGGACTTGAT ATTAGGCAATGCAATGTTGTTATTCGCTTTGATCTTGCAAAAACTGTTCTTGCATATATTCAGTCTCGAGGTCGTGCAAGAAAGCCAGGCTCTGATTACA TCTTGATGGTGGAGAGGGGAAACCTGTCTCATGGAGCATTCTTAAGGAATGCTAGGAATAGTGAGGAGACCCTGAGGAAAGAAGCGATTGAGAGAACTGA CCTCAGTCATCTTAAGGATACTTCAAGGTTAATTGCAGTAGATTCAATACCAGGAACTGTGTATCAGGTGGAGTCTACTGGTGCTGTTGTGAGCTTAAAT TCTGCTGTTGGACTTGTTCATTTCTATTGCTCTCAGTTACCCAGTGACAGGTATTCAATACTTCGTCCTGGGTTTATTATGGAGAAGCATGAGAAGCCAG GAGGTCCCACGGAATATTCATGCAAGCTTCAGCTTCCTTGTAATGCACCATTTGAGGAGCTTGAGGGTCCTGTATGCAGTTCAATGCGCCTTGCACATCA GGCTGTTTGTTTGGCTGCTTGCAAGAAGCTTCATGAGATGGGAGCATTTACTGACATGCTCTTGCCAGACAAGGGAAGTGAGGAAGAAAAGGACAAGGTT GACCAGAATGATGAAGGTGAACCACTTCCTGGTACTGCTAGGCATCGGGAGTTCTATCCTGAAGGTGTAGCTAAGACACTCCAGGGAGAATGGATCTTAT GCGGAAGGGATGGTTGCAACAACTCCAAAGTGCTTCATCTCTACTTGTATGGAGTCAGATGCTTAAACATTGGCACTTCAAATGATCCATTCTTGACTCA AGTTTCAAATTTTGCAGTGCTTTTTGGCAATGAGCTGGATGCAGAGGTCTTATCGATGTCGATGGATCTATTTATCGCTCGAACCATGATAACGAAGGCA TCTCTTGTCTTTAGGGGTCGCATACCTATTACAGAAAGTCAGCTGGCATCCCTTAAAAATTTTCATGTAAGGTTGATGAGCATTGTACTGGATGTGGATG TTGAACCTTCCACCACTCCATGGGATCCTGCAAAAGCTTATTTATTCGTCCCTATGGTTAGCGATAAGTCTGTAGATCCTATAAAAGAAATTGACTGGGA TCTGGTTGAAAATATAATTGGAACAGATGCTTGGAGCAATCGTCTTCAGAGAGCTCGACCAGATGTTTACCTTGGTACAAATGAGAGGACACTTGGTGGA GACAGGAGGGAGTATGGTTTTGGGAAATTGCGACATGGAATTGCTTTTGGACAGAAACCTCATCCCACTTATGGCATCAGGGGAGCTGTAGCACAGTTTG ATGTTGTGAAAGCTTCTGGATTGATTCCTAAGAGGGGATGGGATGCAACTGAGACGCAAAAACTGGAGCTGACCAAAGGCAAATTGATGATGGCTGATAC TTGTGTCAATGCTGATGCTTTGATGGGGAGAATTGTAACAGCTGCTCACTCTGGGAAGAGGTTTTATGTGGATTCCATATGCTATGATATGACTGCAGAG ATCTCATTTCCAAGAAAAGAGGGTTATCTTGGTCCTCTGGAGTACAGCTCATATGCTGATTACTACAAGCAAAAGTATGGAGTTGAATTGAAATTTAAGC AGCAGCCTTTACTAAGAGGACGTGGTGTTTCATACTGCAAGAATCTCTTATCTCCTCGGTTTGAACACTCAGATTCAAATGAAGGCGATGCTGAAGAGAA TCTTGACAAGACTTACTATGTGTTTCTTCCTCCTGAGCTGTGTCTGGTGCACCCTCTTCCTGGATCACTTGTTCGAGGTGCCCAGAGATTACCATCGATA ATGAGGAGGGTTGAAAGCATGCTGCTCGCTGTTGAACTTAAGGATATAATAAATTATCCAGTCCCTGCTTCAAAGATCTTGGAAGCCTTGACTGCTGCTT CATGCCAAGAGACATTCTGCTATGAAAGAGCAGAGCTTCTAGGAGATGCTTACCTGAAATGGGTGGTTAGTCGATTTCTTTTTCTGAAGTATCCCCAGAA ACATGAGGGTCAACTTACTAGAATGAGGCAACAAATGGTAAGTAATATGGTTTTGTATCAATATGCACTTAACAAAGGACTTCAGTCATATATCCAAGCA GATCGCTTTGCTCCATCTCGATGGGCTGCTCCTGGAGTGTTGCCTGTCTTTGATGAGGAAACAAAAGATGGAGACTCGTACATATTTGATCAGGAGAAGT CACTTGCTGAGGATAGAACCGGAATGAATCATCTTGATGATGGGTATGAAAATGAAATTGAAGATGGTGAACTTGAGAGTGATGCTAGTTCTTACAGAGT CCTCTCTAGCAAGACATTGGCAGATGTTGTTGAAGCATTAATTGGTGTTTATTATGTTGAAGGTGGGAAAAATGCTGTTAACCACCTTATGAAATGGATT GGAATTCAGGTAGAGTTTGATCATGAAGAGATAGATGGTGCATCTAGGCCATTCAATGTTCCAGAAAGTGTTCTTAGGAGTGTTGACTTTGATACTTTAG AAGGTGCCTTGGATATTAAGTTCAATGATCGTGGCTTGTTGATAGAAGCCATAACGCATGCTTCACGACCATCTTCTGGAGTATCCTGCTATCAACGATT AGAATTTGTTGGTGACGCAGTCTTAGATCATCTTATTACTAGGCACTTGTTTTTTACATATACAAATCTGCCCCCAGGTCGCCTGACAGACTTGCGAGCC GCTGCTGTAAACAATGAAAATTTTGCACGTGTTGCAGTTAAACATAAGCTTCATGTGCACCTTAGACATGGGTCAAGTGCCCTTGAAAAGCAGATTCGGG ACTTTGTTAGGGAAGTTCAAGATGAACTATTGAAGCCAGTGTTCAACTCCTTTGGTTTGGGAGATTGCAAAGCTCCAAAGGTTCTTGGTGACATCGTTGA ATCCATTGCTGGTGCTATTTTTCTTGACAGCGGACGAGATACAGCGGTTGTGTGGAAGGTTTTTCAACCTCTGTTGCATCCAATGGTCACTCCAGAAACC CTGCCAATGCATCCTGTAAGGGAGCTGCAGGAACGGTGCCAGCAACAGGCTGAAGGATTGGAATACAAAGCCACTCGAAGTGGCAATTTGGCTACTGTTG AAGTTTTCATTGATGGTGTTCAGGTAGGAGTTGCCCAAAATCCACAAAAGAAAATGGCACAGAAACTCGCAGCTAGGAATGCACTTGTTGTTTTGAAAGA GAAGGAAACAGCTGAAGCCAAGGAAAAGAGTGATGAAAATGGGAAGAAGAAAAGGAACGGCAACCAAACCTTTACTAGACAAACATTAAATGATATCTGC TTGCGTAGAAATTGGCCTATGCCATCATATCGGTGTGTCAATGAGGGTGGTCCTGCACATGCAAAGAGGTTTACTTTTGCAGTTCGTGTGAATACTACCG ATAGAGGATGGACAGACGAATGTGTGGGAGAGCCGATGCCGAGTGTTAAGAAGGCCAAAGACTCTGCTGCAGTTCTTCTCTTGGAACTATTAAATAAACG GTACTCATGA
AA sequence Show only first row Show all	>Potri.002G181400.1 pacid=42779272 polypeptide=Potri.002G181400.1.p locus=Potri.002G181400 ID=Potri.002G181400.1.v4.1 annot-version=v4.1 MESESNGRVSGIGGGGGPSYWLDACEDISCDIIDDFVDFDTSIVPELSVDNNSNVNNDFFGGIDHILDSIKNGSGLPPLHNASTTANVSNGNRDCIVGDG WFINVENGVCHGSSVSQSNGGDKDNIDRKGQVENGGNGLNLSNGKREERFSNNFVKENGKKDEQSTEQGIDGDERCGKRARLCCYRNERVYSSRGQHEHR DRERCSSRKRSRDWDESDRRDRDISRRRDRYSGSNRRDGRDRDWRERELRGYWERDRSGSKDMVFRLGTWEADHNKEGREANDKIQECKGELEKKSEESK EKVPEEQARQYQLDVLDQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKILAVFLVPKVPLVYQQAEVIRERGYQVGHYCGEMGQDFWDTRRWQ REFETKQVLVMTAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTPKEKRPSVFGMTASPVNLKGVSSQVDCAIKIRNLESKLDSIV CTIKDRKELEKHVPMPAEVVVEYDKAASLWSLHEQIKQIEAAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALG DLGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLERVVLLLQCQLTEGAVTDKDTKVSDNGNDNIQDGPGFDEIEEGELPDSHVVSGGEHVDVIIGA AVADGKVTPKVQSLIKVLLRYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVRCASLIGHNNSQEMRTSQMQDTIAKFRDGRVTLLVATSVAEEGLD IRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMVERGNLSHGAFLRNARNSEETLRKEAIERTDLSHLKDTSRLIAVDSIPGTVYQVESTGAVVSLN SAVGLVHFYCSQLPSDRYSILRPGFIMEKHEKPGGPTEYSCKLQLPCNAPFEELEGPVCSSMRLAHQAVCLAACKKLHEMGAFTDMLLPDKGSEEEKDKV DQNDEGEPLPGTARHREFYPEGVAKTLQGEWILCGRDGCNNSKVLHLYLYGVRCLNIGTSNDPFLTQVSNFAVLFGNELDAEVLSMSMDLFIARTMITKA SLVFRGRIPITESQLASLKNFHVRLMSIVLDVDVEPSTTPWDPAKAYLFVPMVSDKSVDPIKEIDWDLVENIIGTDAWSNRLQRARPDVYLGTNERTLGG DRREYGFGKLRHGIAFGQKPHPTYGIRGAVAQFDVVKASGLIPKRGWDATETQKLELTKGKLMMADTCVNADALMGRIVTAAHSGKRFYVDSICYDMTAE ISFPRKEGYLGPLEYSSYADYYKQKYGVELKFKQQPLLRGRGVSYCKNLLSPRFEHSDSNEGDAEENLDKTYYVFLPPELCLVHPLPGSLVRGAQRLPSI MRRVESMLLAVELKDIINYPVPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNMVLYQYALNKGLQSYIQA DRFAPSRWAAPGVLPVFDEETKDGDSYIFDQEKSLAEDRTGMNHLDDGYENEIEDGELESDASSYRVLSSKTLADVVEALIGVYYVEGGKNAVNHLMKWI GIQVEFDHEEIDGASRPFNVPESVLRSVDFDTLEGALDIKFNDRGLLIEAITHASRPSSGVSCYQRLEFVGDAVLDHLITRHLFFTYTNLPPGRLTDLRA AAVNNENFARVAVKHKLHVHLRHGSSALEKQIRDFVREVQDELLKPVFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTAVVWKVFQPLLHPMVTPET LPMHPVRELQERCQQQAEGLEYKATRSGNLATVEVFIDGVQVGVAQNPQKKMAQKLAARNALVVLKEKETAEAKEKSDENGKKKRNGNQTFTRQTLNDIC LRRNWPMPSYRCVNEGGPAHAKRFTFAVRVNTTDRGWTDECVGEPMPSVKKAKDSAAVLLLELLNKRYS

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT1G01040		SIN1, EMB76, EM...	SHORT INTEGUMENTS 1, EMBRYO DE...		Potri.002G181400 [exp]	0	1	SIN1.1,DCL902
AT1G77800			PHD finger family protein (.1....		Potri.005G171800 [exp]	1.00	0.8873
AT1G73960		TAF2	TBP-associated factor 2 (.1.2)		Potri.015G050800 [exp]	1.41	0.8816
AT4G02070		ATMSH6, MSH6-1	MUTS HOMOLOG 6-1, ARABIDOPSIS...		Potri.014G121601 [exp]	2.00	0.8617
AT1G55325		MAB2, GCT	MACCHI-BOU 2, GRAND CENTRAL, R...		Potri.003G220800 [exp]	5.74	0.8647
AT5G67570		EMB246, DG1, EM...	EMBRYO DEFECTIVE 246, embryo d...		Potri.007G004900 [exp]	8.77	0.8307
AT5G64420			DNA polymerase V family (.1)		Potri.001G285600 [exp]	10.39	0.8071
AT3G10390		FLD	FLOWERING LOCUS D, Flavin cont...		Potri.008G035200 [exp]	13.78	0.8193
AT2G29200		APUM1	pumilio 1 (.1)		Potri.010G201100 [exp]	16.00	0.8255
AT1G24706		EMB2793, AtTHO2	EMBRYO DEFECTIVE 2793, THO2 (....		Potri.019G054600 [exp]	16.97	0.8199
AT2G39340		AtSAC3A	yeast Sac3 homolog A, SAC3/GAN...		Potri.008G047700 [exp]	17.14	0.8320

Compare expression of checked genes

Potri.002G181400 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.