Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol	ATFIP37.1
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT3G54170 358 / 1e-123 ATFIP37 FKBP12 interacting protein 37 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10039948 [exp] 376 / 3e-130 AT3G54170 414 / 4e-145 FKBP12 interacting protein 37 (.1) Lus10027681 [exp] 376 / 5e-130 AT3G54170 402 / 2e-140 FKBP12 interacting protein 37 (.1) Lus10018090 [exp] 369 / 1e-127 AT3G54170 390 / 6e-136 FKBP12 interacting protein 37 (.1) Lus10042086 [exp] 352 / 3e-114 AT3G54170 381 / 3e-125 FKBP12 interacting protein 37 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF17098 [poplar] [flax] Wtap WTAP/Mum2p family
Representative CDS sequence Show only first row Show all	>Potri.002G197600.1 pacid=42777559 polypeptide=Potri.002G197600.1.p locus=Potri.002G197600 ID=Potri.002G197600.1.v4.1 annot-version=v4.1 ATGGCATCGCACAACCATCTCGACGTCGATGATGATGATTTTGGCGGTGATTTTCCCGGGAGCCACAATAGCAGACGTTCTGGCAACAAGAGAAGCTTTG GAGATCTCGAGGATGACGAAGATGATATTTTTAGCTCCAAAAAGGGTAATTCCAAGGTAGAAGAAACTGCAATGATTTTGTCGCTTCGTGAGAGTCTTGA GACTTGTAAAAGTTCACTCGCAACATGCCAGACAGAGCTTGAAGCTGCAAAATCTGAAATTCAGAAGTGGCGTTCTGCATTTGAGAATGAGTCCTCCATA CCTGCTGGGGCATCTCTTGAACCTAGACTAGTGATCAACTATCTTCAGACCCTGAAATCTTCTGAGGAGTTATTGAGAGAGCAGTTAGAAAAGGCTAAGA AGAAGGAAGCTGCCTTTATTGTAACTTTTGCAAAACGGGAGCAGGAGATAGCAGAGCTAAAGTCTGCAGTCCGGGATCTGAAAGCTCAACTCAAGCCACC ATCAATGCAGGCAAGGAGGTTACTGCTGGATCCAGCAATTCATGAGGAATTTACACGTTTGAAGAATTTGGTTGAGGAGAAGGACAAGAAGGTGAAGGAA TTGCAGGATAATATTGCTGCTATGAATTTTACTCCACAAAGCAAGATGGGGAAGATGCTGATGGCAAAGTGTAGGACACTGCAAGAGGAAAATGAGGAGA TTGGGAATCAAGCTGCAGAAGGAAAGATACATGAATTAGCAATGAAACTTGCTTTGCAGAAATCGCAGAATGCAGAACTTAGAAGTCAATTTGAAGGACT GTACGAACACATGGAGGGCCTGACAAATGATGTAGAGAAATCAAATGAAACGGTACTTCTGTTGCAAGAAAAGCTAGAGGAGAAGGATCAGGAGCTTAAA AAGCTGAAGCTTCAAGTACCGCAGAAGACATTTGTGGAGGAAAAAACTGATCCGTGTCCAAATAAAACAGTCAGCGCTGATGAATTTAAGAAGGAAGCTG AGGTCAACTAG
AA sequence Show only first row Show all	>Potri.002G197600.1 pacid=42777559 polypeptide=Potri.002G197600.1.p locus=Potri.002G197600 ID=Potri.002G197600.1.v4.1 annot-version=v4.1 MASHNHLDVDDDDFGGDFPGSHNSRRSGNKRSFGDLEDDEDDIFSSKKGNSKVEETAMILSLRESLETCKSSLATCQTELEAAKSEIQKWRSAFENESSI PAGASLEPRLVINYLQTLKSSEELLREQLEKAKKKEAAFIVTFAKREQEIAELKSAVRDLKAQLKPPSMQARRLLLDPAIHEEFTRLKNLVEEKDKKVKE LQDNIAAMNFTPQSKMGKMLMAKCRTLQEENEEIGNQAAEGKIHELAMKLALQKSQNAELRSQFEGLYEHMEGLTNDVEKSNETVLLLQEKLEEKDQELK KLKLQVPQKTFVEEKTDPCPNKTVSADEFKKEAEVN

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT3G54170		ATFIP37	FKBP12 interacting protein 37 ...		Potri.002G197600 [exp]	0	1	ATFIP37.1
AT1G09740			Adenine nucleotide alpha hydro...		Potri.002G104700 [exp]	4.24	0.5883
					Potri.005G043600 [exp]	8.12	0.5797
AT3G18040		ATMPK9	MAP kinase 9 (.1.2)		Potri.015G040300 [exp]	14.83	0.5793	MPK8.2
AT3G52190		AtPHF1, PHF1	phosphate transporter traffic ...		Potri.010G232400 [exp]	15.81	0.5475
AT1G32120			unknown protein		Potri.001G132800 [exp]	19.49	0.5644
AT1G11480			eukaryotic translation initiat...		Potri.011G031900 [exp]	25.90	0.5456
AT1G10430		PP2A-2	protein phosphatase 2A-2 (.1)		Potri.015G068300 [exp]	30.39	0.5436	VFPP2.2
AT5G28850			Calcium-binding EF-hand family...		Potri.013G047300 [exp]	37.24	0.5242
AT3G20070		TTN9	titan9 (.1.2)		Potri.009G049500 [exp]	44.42	0.5338	TTN9.1
AT3G49645			unknown protein		Potri.017G091300 [exp]	54.22	0.5230

Compare expression of checked genes

Potri.002G197600 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.