Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol	CHR928,PIE1.4
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT3G12810 1824 / 0 CHR13, SRCAP, PIE1 PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1, SNF2 domain-containing protein / helicase domain-containing protein (.1) AT3G57300 316 / 3e-87 ATINO80 INO80 ortholog (.1.2) AT3G06400 278 / 1e-76 CHR11 chromatin-remodeling protein 11 (.1.2.3) AT5G18620 277 / 3e-76 CHR17 chromatin remodeling factor17 (.1.2) AT3G06010 267 / 8e-73 ATCHR12 Homeotic gene regulator (.1) AT5G19310 257 / 1e-69 Homeotic gene regulator (.1) AT5G66750 240 / 7e-66 CHR01, CHA1, SOM1, CHR1, SOM4, DDM1, ATDDM1 SOMNIFEROUS 1, DECREASED DNA METHYLATION 1, chromatin remodeling 1 (.1) AT2G28290 234 / 3e-61 CHR3, SYD SPLAYED, CHROMATIN REMODELING COMPLEX SUBUNIT R 3, P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1.2.3) AT2G46020 224 / 2e-58 CHA2, ATBRM, CHR2, BRM CHROMATIN REMODELING 2, ARABIDOPSIS THALIANA BRAHMA, transcription regulatory protein SNF2, putative (.1.2) AT2G13370 223 / 3e-58 CHR5 chromatin remodeling 5 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.001G207700 [exp] 3246 / 0 AT3G12810 2199 / 0.0 PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1, SNF2 domain-containing protein / helicase domain-containing protein (.1) Potri.016G043500 [exp] 322 / 6e-89 AT3G57300 2157 / 0.0 INO80 ortholog (.1.2) Potri.006G047100 [exp] 316 / 3e-87 AT3G57300 2135 / 0.0 INO80 ortholog (.1.2) Potri.010G021400 [exp] 278 / 1e-76 AT3G06400 1748 / 0.0 chromatin-remodeling protein 11 (.1.2.3) Potri.008G205600 [exp] 274 / 2e-75 AT3G06400 1724 / 0.0 chromatin-remodeling protein 11 (.1.2.3) Potri.010G091200 [exp] 268 / 4e-73 AT3G06010 1408 / 0.0 Homeotic gene regulator (.1) Potri.008G149900 [exp] 264 / 1e-71 AT3G06010 1485 / 0.0 Homeotic gene regulator (.1) Potri.019G129900 [exp] 236 / 7e-65 AT5G66750 1047 / 0.0 SOMNIFEROUS 1, DECREASED DNA METHYLATION 1, chromatin remodeling 1 (.1) Potri.007G026700 [exp] 235 / 3e-64 AT5G66750 993 / 0.0 SOMNIFEROUS 1, DECREASED DNA METHYLATION 1, chromatin remodeling 1 (.1)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10002974 [exp] 1059 / 0 AT3G12810 1071 / 0.0 PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1, SNF2 domain-containing protein / helicase domain-containing protein (.1) Lus10007173 [exp] 663 / 0 AT3G12810 668 / 0.0 PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1, SNF2 domain-containing protein / helicase domain-containing protein (.1) Lus10007174 [exp] 297 / 6e-90 AT3G12810 281 / 2e-85 PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1, SNF2 domain-containing protein / helicase domain-containing protein (.1) Lus10031050 [exp] 317 / 2e-87 AT3G57300 2115 / 0.0 INO80 ortholog (.1.2) Lus10033967 [exp] 270 / 2e-72 AT5G18620 1650 / 0.0 chromatin remodeling factor17 (.1.2) Lus10010522 [exp] 253 / 2e-68 AT3G06010 1358 / 0.0 Homeotic gene regulator (.1) Lus10041735 [exp] 248 / 2e-68 AT5G66750 1069 / 0.0 SOMNIFEROUS 1, DECREASED DNA METHYLATION 1, chromatin remodeling 1 (.1) Lus10034064 [exp] 251 / 8e-68 AT3G06010 1422 / 0.0 Homeotic gene regulator (.1) Lus10024019 [exp] 233 / 6e-63 AT5G66750 1034 / 0.0 SOMNIFEROUS 1, DECREASED DNA METHYLATION 1, chromatin remodeling 1 (.1) Lus10012798 [exp] 231 / 2e-60 AT2G28290 1549 / 0.0 SPLAYED, CHROMATIN REMODELING COMPLEX SUBUNIT R 3, P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1.2.3)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0023 [poplar] [flax] P-loop_NTPase PF00271 [poplar] [flax] Helicase_C Helicase conserved C-terminal domain CL0023 [poplar] [flax] P-loop_NTPase PF04851 [poplar] [flax] ResIII Type III restriction enzyme, res subunit CL0023 [poplar] [flax] P-loop_NTPase PF07529 [poplar] [flax] HSA HSA
Representative CDS sequence Show only first row Show all	>Potri.003G022100.8 pacid=42787440 polypeptide=Potri.003G022100.8.p locus=Potri.003G022100 ID=Potri.003G022100.8.v4.1 annot-version=v4.1 ATGGCGTCGAAAGGTCCAAGGTCTAAGCTTGATCACGAGACGAGAGCTCGGCGTCAAAAGGCACTGGAAGCTCCAAGAGAACCCCGTCGCCCGAAAACTC ACTGGGATCATGTTTTGGAGGAAATGGTTTGGTTGTCGAAGGATTTTGAGTCGGAGAGGAAATGGAAATTGGCGCAAGCCAAGAAAGTGGCTTTAAGAGC AAGCAAGGGCATGTTGGATCAGGCCACCAGAGGAGAAAAGAAATTGAAGGAAGAGGAGCAGCGGTTGCGAAAAGTAGCGGTCAATATTTCAAAGGATGTA AAGAAGTTCTGGGTTAAAATAGAAAAGCTGGTGCTTTACAAGCATCAGATGGAGCTTGATGAGAAGAAGAAAAAGGCACTTGATAAGCATCTTGAGTTTC TTCTAGGACAAACTGAGAGGTACTCTACAATGCTGGCAGAAAATCTAGTGGAGAAACCACCAGAGCAATATTTTGCACCAGAAAAACCGAGTATTGCGGA TAGGGTAGGAGATGATGCTAATACACCCCTGCAAGTTGTTGATGCTCATTGTTTAGAGGCCCAAGTGGACACTGCAGACAATGACGATGAGTATGATGTG CAATCTGAAGATGAAGTGGAAGATGATGAGCATACTATTGAGGAAGATGAGGCTCTTATAACCAAAGAAGAAAGGCAAGAAGAATTGGAAGCTCTGCACA ATGAAATGGATATTCCCCTTGAGGAGCTACTCAAGCGTTACGCTGTAGAGAAAGGTGGCAGGGAAAGTAGTGAAAATGGAGCTAAGCCATGTGCAAATGG GGAAGAACATTGTGAGAGCAAAGGAGAAGATATTTCTGCTGCTTGTGAGATGGAGATAAGCAGCTCACCTGTTAATGCTGGTCGTCGTTGTGGTGAAAAT AATGGTGCCTTGCCCATTCCAGACAACAATTTATTGGAAATTGGGGCATATGAAACCAGAAATCAGTTAAGTATCTCTGAGGATCCAGCCAGAGAACATG TGCCATATGATTTCAATGATGAACAGGAAGATGGTGATTTTGATCTTGCCGCTGAAGAAGAAAAGGATGATGAGACAACCTTGTTGGAGGAGGAAGAGAT GGCAAAAGCAGATTCAAACAATCCCATAGATGAGATTTTGTTACTGCAAAAGGAGAGTGAAATTCCTTTGGAAGAATTGCTTGCAAGGTATACAAAGGAG CCAAACAGTGAAGTTTCAGAGGATGAATCTGAATACGCACCAGTATTATCAGACAATATGTCAAATTCCCCAGGCCATGAAGAAGAACTGAAGCAGCTGG ATAACTCAATGGATGAAATGGTTGAACATGGGGAACATCCTCTTGTAGAAGAACAAGAGAAGGGAAATGAAGAAATTTCAGAAGAAGGAAGGGAGAGTGA AAGTAAGATAGCTGATGCTGCTGCTGCTGCAAGATCTGCACAACCAACAGGCAATACATTCTCGACAACCAAAGTGCGCACAAAATTCCCCTTTCTTCTC AAGTATCCTCTTCGTGAATATCAACATATAGGCCTCGATTGGCTTGTTACAATGTATGAACAAAGATTAAATGGGATTCTAGCTGATGAAATGGGGCTTG GAAAGACGATCATGACAATTGCTTTGCTTGCACACCTAGCATGTGAAAAGGGAATATGGGGTCCTCATCTGATTGTGGTTCCAACAAGTGTCATGCTTAA CTGGGAAACAGAGTTTCTTAAATGGTGTCCTGCCTTCAAGATTTTAACATATTTTGGCAGTGCAAAAGAGCGTAAATGCAAGAGGCAAGGTTGGCTGAAA CCAAATTTCTTCCATGTATGCATAACAACTTACAGACTGGTTATACAGGATTCTAAAGTCTTCAAGAGGAAGAAATGGAAGTATTTGATTTTGGATGAAG CTCATCTGATTAAAAATTGGAAGTCCCAGAGATGGCAAACTCTTTTAAATTTCAATTCAAAAAGACGCATCTTATTAACTGGCACACCTCTGCAGAATGA TCTCATGGAACTGTGGTCACTAATGCATTTCTTGATGCCCCACATCTTTCAATCTCACCAGGAATTTAAGGACTGGTTCAGTAATCCAATAACTGGGATG GTGGAGGGACAAGAAAGAGTGAACAAAGAAGTTGTTGATCGTTTGCACAATGTTCTCCGTCCGTTTATCCTCCGTCGATTGAAAAGGGACGTGGAGAAGC AACTCCCCATGAAAGTTGAACATGTAATCTTTTGTAGACTTTCAAGGAGGCAGCGTAACTTGTACGAGGATTTCATTGCTAGTTCAGAGACACAAGCTAC CCTTGCCACTGCCAACTTTTTTGGGATGATCAGCATCATAATGCAACTTCGTAAAGTTTGTAATCATCCCGACTTATTTGAGGGTCGTCCAATTATTAGT TCTTTTGATATGGCTGGTGTGGACATCCAATTGAGTAGTTCTATTTGTTCAATGTTTTCACCTGGCCCATATTCATCTGTAGATCTTTGTGCTTTGGGGC TTATATTTACACATCTTGATTTTAACATGGTTTCTTGGGAGTGCGATGAAGTAAAGGCTATTGCAACTCCTTCAAGATTAATTGAAGAGCGTGCCAATTT GGCTAACATAGAAGATGTTGGGCCTGGGTCTAAACATTTGAAGAGATTGCCTGGAACAAATATTTTTGAAGAGATTAGAAAGTCATTATTGGAGGGGAGA TTAAGAGAGATGAAGCAACGGGCAGCATCTATTGCGTGGTGGAATTCTTTGAGGTGTCGGAAAAAACCCATATACTCAACAACCCTACGAGAACTTCTCA CGGTGAAGCATCCTATCTATGATATCCATCGCCAAAAAGTTGAGCGACTCTCCTCGTTATGCTCCTCTAAGCTTGGTGATGTTGTTCTTTCACCAATTGA ACGGTTCCAGAAGATGACTGATCTCGTGGAATCATTTATGTTTGCAATTCCAGCAGCACGTTCCACTGCACCTATCTTCTGGTGCAGTCAGACCAGAACT CCTGTGTTTCTGCATTCAACTTATGAGGAGAAATGCTCTGAAATGTTGTTGCCTCTTCTTTCACCTATTAGACCTGCAATTGTCCGGAGACAACTGTATT TCCCAGACAGGCGCCTAATACAGTTTGACTGTGGTAAATTGCAGGAGCTTGCTATTTTGCTCAGGAAGTTAAAGTCAGAAGGCCATCGGGTATTAATATT CACACAGATGACCAAGATGCTGGATATTTTGGAGGCTTTCATAAACCTGTACGGCTACACTTACATGCGTTTAGATGGATCTACTCAACCAGAGGATAGA CAAACTTTAATGCAGCGTTTCAACACCAATCCCAAAATATTTATCTTCATTCTATCAACCCGTAGTGGGGGTGTTGGCATCAATCTTGTTGGGGCAGATA CTGTAATCTTCTATGATAGTGACTGGAATCCTGCGATGGATCAACAAGCCCAAGATCGCTGCCATCGGATAGGACAGACACGTGAAGTGCATATCTACAG GTTAATCAGTGAGAGCACCATTGAAGAAAATATCTTAAAGAAAGCCAATCAGAAGCGTGCTCTTGATGATCTAGTTATACAGAGTGGAGGATACAACACA GAATTTTTCAAGAAGCTCGATCCTATGGAATTATTTTCTGGGCATAAAACACTTCAGATTAAGAACATGCAGAGGGAGAAAAACAATAACAATGGAAATG AGGTTTCTTTGTCTAATGCAGACGTGGAGGCTGCTCTGAAATATGCTGAAGATGAAGCAGATTACATGGCATTGAAGAAAGTCGAACAGGAAGAGGCTGT AGACAACCAAGAGTTTACTGAAGAGGCCATTGGGAGATTGGAAGATGATGAATTCGTAAATGATGATGATATGAAGGCTGATGAGCCTACAGACCATGAG ATGACAACTTATTGCAAAGAGGGTGAGGTGAATTTAGATGAAAATGATTGCATTGAAGAGAGAGCTGTAACTTTTACTGGGAACAAAGATGATGTCGATA TGTTGGCTGATGTCAAGCAGATGGCAGCGGCGGCAGCTGCTGCTGGACAAGCTATCTCATCCTTCGAAAATCAGCTACGTCCAATAGACAGATATGCAGT CCGTTTTCTGGAACTGTGGGATCCAATTATAGACAAAGCAGCCTTGGAATCCCAAGTTAGGTTTCAGGAGACAGAATGGGAGCTTGATCGTATTGAGAAG TACAAGGACGAAATGGAAGCTGAGATTGATGATGATGAAGAGCCATTGGTGTATGAAAGATGGGATGCTGATTTTGCGACCGAGGCATACCGACAACAAG TTGAGGCGCTAACTCAATATCAGTTGATGGAAGAAAAGGAAGCTGAAGCTGAAGCTGAAGCTAATGAGAAGGAAAGTGCAGATGGACATTTAGATGCTAT GGTCAGGTGTAAAGTGCCACGCAATCCTAAATCGAAGTCTAAGAAGAAACCAAAGAAAACCAAGTTCAAATCCCTCAAGAAAGAATCTTTAACTTCTGAA TTGAAACACATGAAAGTGGAGGCATCAATAGAAACTTTGTCTGCAGATGATGAGGACGACGACGACGACGTGATATATCCTGATGATGGTACATATTCAG ATACTACGTCTCCTTATTCAAGTGTGCAGAGAAAACGTAAGAAAGCAGAATTAGCAATTGATATAGACAAAAAGAGGTCAAGGAAGAATAGCAAGAAATT CAAAAAAGCTCCCGAAACGTGCTCTTTTGATGTAGATTCGGATCTGTCTGGAAAGCAGCATGGCAGGTCTATGGAATTAAAACCATATGAGGTGGTTTCT GATCTTGAGCAGAAACCAGCTGGCAGGAGCAAGATGGGAGGGAAAATCTCCATCAGTACCATGCCAGTGAAACGGGTGTTGATGATAAAGCCAGAGAAGT TAAAGAAAGGGAATGTTTGGTCGAGAGATTGTGTTCCTCCACCTGATTCATGGTTGCCACAGGAGGATGCAATATTATGTGCTGTTGTACATGAATATGG CCCTCACTGGAGCTTGGTCAGTGAAACTCTGTATGGGATGGCTGCTGGTGGGTTTTATCGGGGAAGATACCGCCATCCAGTTCATTGTTGTGAGAGATTT AGAGAACTAATCCATAGATATGTTTTATCTTCTCCAGAATATCCTATCAATAATGAAAAGATGAGCAATATGGTCTCCGGGAAGGCCCTTCTCAAAGTAA CTGAGGATAACATACGGATGTTATTAAATGTTGCTGCTGAGCAGCCAGACCATGAGTTACTTCTCCAGAAGCACTTCACAGCACTGCTTTCTGCTGTGTG GAGGGTGAACTCTCGTGCTGAACGTCAACAGAACTTGTCATCATCTCGAAATGCTCTTTATAATCATGGAAGGGTTTTCAATTCTTCTGTCAATCAGTTA CCTTCGAATTCCTCAAAGGAATCTGCAAAAAGAATGAAATTCACTAATTTGGGACATAGTAGCAAGTTGCTTGCTGATGCACTCCATGATGCCAGCAGTA GAAGGCCAGATGATAGAGTTTCCTATTCCAACTTGAGCGAAGTTGCTCCTGCCATTGGTGAGCAGTTGGAAATAACATTGGAATTCCAAAAAGAGGAAGA TGATTCTTTGATTCAATTCCCACCTATAATAAGTTTGTCAATACCTAGCTCAGCGCCATTGACATCAGTAAATAAGGATAGAGCAGAGGCTCACCATCTC AGAGCATCCACAAGTATAGCTGAAAATCGATTCAGGGATGCAGCAAGAGCTTGTGTTGAAGGAGATCTGGGCTGGGTTTCATCTTCCGCACCAGCAAATG ATTTCAAGTTGCGGCTGCCTTCAAAGACGCAGTCCTTGGGAAAGCACAAGCTCTCCGTCTCCGAGTCAACCAAGCCTCCTAGGTCAAAGATGAAGAAAAC TTTAATAGAGCACAGTCAAGGACACCTTTTTGCCGAGCCAGTATCCCAGCCACTGCCTGTACTGTCATCCAGGGATCCCAATTTAAGGTTTGACCTGCCG CCAATAGCCATTCAGGATGACAAGGATGAATATTCTATCTCATGCATTGAGAAGGAGCTTTCAGCGGAAATGGGGACCTGGGATGCTGTCGCACATGACT ATGTTCTTGGTTTCACATCGGGTCTTGATGATTTTTCATCGTTGCCAGAATTTACTGACATCGGATAA
AA sequence Show only first row Show all	>Potri.003G022100.8 pacid=42787440 polypeptide=Potri.003G022100.8.p locus=Potri.003G022100 ID=Potri.003G022100.8.v4.1 annot-version=v4.1 MASKGPRSKLDHETRARRQKALEAPREPRRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKKVALRASKGMLDQATRGEKKLKEEEQRLRKVAVNISKDV KKFWVKIEKLVLYKHQMELDEKKKKALDKHLEFLLGQTERYSTMLAENLVEKPPEQYFAPEKPSIADRVGDDANTPLQVVDAHCLEAQVDTADNDDEYDV QSEDEVEDDEHTIEEDEALITKEERQEELEALHNEMDIPLEELLKRYAVEKGGRESSENGAKPCANGEEHCESKGEDISAACEMEISSSPVNAGRRCGEN NGALPIPDNNLLEIGAYETRNQLSISEDPAREHVPYDFNDEQEDGDFDLAAEEEKDDETTLLEEEEMAKADSNNPIDEILLLQKESEIPLEELLARYTKE PNSEVSEDESEYAPVLSDNMSNSPGHEEELKQLDNSMDEMVEHGEHPLVEEQEKGNEEISEEGRESESKIADAAAAARSAQPTGNTFSTTKVRTKFPFLL KYPLREYQHIGLDWLVTMYEQRLNGILADEMGLGKTIMTIALLAHLACEKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKCKRQGWLK PNFFHVCITTYRLVIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHIFQSHQEFKDWFSNPITGM VEGQERVNKEVVDRLHNVLRPFILRRLKRDVEKQLPMKVEHVIFCRLSRRQRNLYEDFIASSETQATLATANFFGMISIIMQLRKVCNHPDLFEGRPIIS SFDMAGVDIQLSSSICSMFSPGPYSSVDLCALGLIFTHLDFNMVSWECDEVKAIATPSRLIEERANLANIEDVGPGSKHLKRLPGTNIFEEIRKSLLEGR LREMKQRAASIAWWNSLRCRKKPIYSTTLRELLTVKHPIYDIHRQKVERLSSLCSSKLGDVVLSPIERFQKMTDLVESFMFAIPAARSTAPIFWCSQTRT PVFLHSTYEEKCSEMLLPLLSPIRPAIVRRQLYFPDRRLIQFDCGKLQELAILLRKLKSEGHRVLIFTQMTKMLDILEAFINLYGYTYMRLDGSTQPEDR QTLMQRFNTNPKIFIFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQSGGYNT EFFKKLDPMELFSGHKTLQIKNMQREKNNNNGNEVSLSNADVEAALKYAEDEADYMALKKVEQEEAVDNQEFTEEAIGRLEDDEFVNDDDMKADEPTDHE MTTYCKEGEVNLDENDCIEERAVTFTGNKDDVDMLADVKQMAAAAAAAGQAISSFENQLRPIDRYAVRFLELWDPIIDKAALESQVRFQETEWELDRIEK YKDEMEAEIDDDEEPLVYERWDADFATEAYRQQVEALTQYQLMEEKEAEAEAEANEKESADGHLDAMVRCKVPRNPKSKSKKKPKKTKFKSLKKESLTSE LKHMKVEASIETLSADDEDDDDDVIYPDDGTYSDTTSPYSSVQRKRKKAELAIDIDKKRSRKNSKKFKKAPETCSFDVDSDLSGKQHGRSMELKPYEVVS DLEQKPAGRSKMGGKISISTMPVKRVLMIKPEKLKKGNVWSRDCVPPPDSWLPQEDAILCAVVHEYGPHWSLVSETLYGMAAGGFYRGRYRHPVHCCERF RELIHRYVLSSPEYPINNEKMSNMVSGKALLKVTEDNIRMLLNVAAEQPDHELLLQKHFTALLSAVWRVNSRAERQQNLSSSRNALYNHGRVFNSSVNQL PSNSSKESAKRMKFTNLGHSSKLLADALHDASSRRPDDRVSYSNLSEVAPAIGEQLEITLEFQKEEDDSLIQFPPIISLSIPSSAPLTSVNKDRAEAHHL RASTSIAENRFRDAARACVEGDLGWVSSSAPANDFKLRLPSKTQSLGKHKLSVSESTKPPRSKMKKTLIEHSQGHLFAEPVSQPLPVLSSRDPNLRFDLP PIAIQDDKDEYSISCIEKELSAEMGTWDAVAHDYVLGFTSGLDDFSSLPEFTDIG

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT3G12810		CHR13, SRCAP, P...	PHOTOPERIOD-INDEPENDENT EARLY ...		Potri.003G022100 [exp]	0	1	CHR928,PIE1.4
AT1G10320	C3HZnF		Zinc finger C-x8-C-x5-C-x3-H t...		Potri.004G228600 [exp]	1.41	0.9154
AT2G13370		CHR5	chromatin remodeling 5 (.1)		Potri.009G047800 [exp]	2.00	0.9232
AT1G65440		GTB1	global transcription factor gr...		Potri.016G029200 [exp]	3.00	0.9078
AT2G39260			binding;RNA binding (.1)		Potri.008G045400 [exp]	3.31	0.8737
AT1G65440		GTB1	global transcription factor gr...		Potri.006G031900 [exp]	3.87	0.8853
AT3G12810		CHR13, SRCAP, P...	PHOTOPERIOD-INDEPENDENT EARLY ...		Potri.001G207700 [exp]	4.24	0.8846
AT1G28420	HD	HB-1	homeobox-1 (.1)		Potri.004G048675 [exp]	5.09	0.8676
AT5G04290		SPT5L, KTF1	SPT5-LIKE, kow domain-containi...		Potri.008G032800 [exp]	5.29	0.8816
AT5G53440			unknown protein		Potri.012G013800 [exp]	5.65	0.8913
AT1G03080			kinase interacting (KIP1-like)...		Potri.002G049600 [exp]	6.00	0.8260

Compare expression of checked genes

Potri.003G022100 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.