Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol	Pt-EMB177.4
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G80070 4524 / 0 EMB33, EMB177, EMB158, EMB14, SUS2 ABNORMAL SUSPENSOR 2, EMBRYO DEFECTIVE 33, EMBRYO DEFECTIVE 177, EMBRYO DEFECTIVE 14, Pre-mRNA-processing-splicing factor (.1) AT4G38780 4324 / 0 Pre-mRNA-processing-splicing factor (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10011489 [exp] 4590 / 0 AT1G80070 4603 / 0.0 ABNORMAL SUSPENSOR 2, EMBRYO DEFECTIVE 33, EMBRYO DEFECTIVE 177, EMBRYO DEFECTIVE 14, Pre-mRNA-processing-splicing factor (.1) Lus10023129 [exp] 4566 / 0 AT1G80070 4583 / 0.0 ABNORMAL SUSPENSOR 2, EMBRYO DEFECTIVE 33, EMBRYO DEFECTIVE 177, EMBRYO DEFECTIVE 14, Pre-mRNA-processing-splicing factor (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0366 [poplar] [flax] JAB PF01398 [poplar] [flax] JAB JAB1/Mov34/MPN/PAD-1 ubiquitin protease CL0366 [poplar] [flax] PF08083 [poplar] [flax] PROCN PROCN (NUC071) domain CL0366 [poplar] [flax] PF08084 [poplar] [flax] PROCT PROCT (NUC072) domain CL0363 [poplar] [flax] H-int PF10596 [poplar] [flax] U6-snRNA_bdg U6-snRNA interacting domain of PrP8 CL0363 [poplar] [flax] PF10597 [poplar] [flax] U5_2-snRNA_bdg U5-snRNA binding site 2 of PrP8 CL0363 [poplar] [flax] PF10598 [poplar] [flax] RRM_4 RNA recognition motif of the spliceosomal PrP8 CL0363 [poplar] [flax] PF12134 [poplar] [flax] PRP8_domainIV PRP8 domain IV core
Representative CDS sequence Show only first row Show all	>Potri.003G031900.1 pacid=42786122 polypeptide=Potri.003G031900.1.p locus=Potri.003G031900 ID=Potri.003G031900.1.v4.1 annot-version=v4.1 ATGTGGAACGACACCGGAGAGCAGCATATAGCGCCTCCGGGGACGGCTGGGCCGTCGATCCCACCGCCTCCACCGTCGCAGCCTTCTTACACCGTACTGG CGCCGTCGCAAACGGTGTCGAATCCAGCGGATGCGGAGGCGAAGCTGGAGGAGAAGGCCAGGAAATGGCAGCAACTTAACACGAAGAGGTACAGTGATAA GCGGAAGTTTGGTTTCGTCGAGACGCAAAAGGAGGATATGCCGCCGGAACACGTGAGGAAGATTATAAGGGACCATGGTGATATGTCCTCGAAGAAATAT CGCCATGATAAACGTGTGTATCTTGGAGCCCTTAAATTCATTCCACATGCAGTATACAAGCTTCTTGAGAATATGCCAATGCCCTGGGAGCAGGTTCGTG ATGTGAAGGTTCTATACCATATTACAGGAGCGATCACTTTTGTGAATGAAATTCCATGGGTTGTTGAACCTATTTACTTAGCTCAGTGGGGGACAATGTG GATCATGATGCGAAGAGAAAAGAGGGATCGGCGGCATTTCAAGAGAATGAGGTTTCCGCCTTTTGATGATGAGGAACCTCCTTTAGACTATGCTGATAAT TTGTTAGATGTTGATCCTCTAGAGCCTATTCAATTAGAGTTGGACGAAGAAGAAGATTCTGCTGTCTATACTTGGTTTTATGACCATAAGCCTCTTGTTA AAACGAAGCTTATCAATGGTCCTAGTTACAGGAAGTGGCATCTCTCTCTTCCAATAATGGCGACTCTTCACCGTCTGGCAGGACAGCTTCTTTCTGATCT AATTGACCGCAACTATTTTTACTTGTTCGACATGGAGTCATTCTTTACAGCCAAAGCATTGAACATGTGCATACCTGGCGGGCCTAAGTTTGAACCTTTG TATCGTGACATGGAGAAAGGTGATGAGGACTGGAACGAATTCAATGACATCAACAAACTCATTATTCGGTCACCTTTGCGGACAGAGTATAGAATTGCAT TTCCTCATCTTTACAATAATAGGCCCCGGAAAGTAAAACTTTGTGTGTATCACACTCCCATGATCATGTACATTAAAGCTGAGGATCCTGATTTACCTGC TTTCTATTATGATCCTTTGATACACCCAATAACCTCCTCTAACAAGGAACGCCGTGAAAAAAAGACTCATGATGACGATGATGATGATGAGGATTTTGTT ATGCCAGAAGGGGTGGAACCTTTTTTGGAGGATACACAGCTTTATACTGACACCACAGCTGCTGGCATTTCCTTGTTATTTGCTAACCGACCTTTTAACA TGAGATCTGGACGGATGCGACGGGCAGAAGATATACCCCTTGTGTCGGAGTGGTATAAGGAGCACTGTCCTCCATCATATCCTGTCAAAGTTCGAGTTAG CTATCAGAAATTGTTGAAATGTTTTGTTTTGAATGAACTGCATCATAGACCGCCAAAAGCTCAGAAGAAGAAGCACTTGTTCCGGTCATTAGCAGCAACT AAATTCTTCCAAACCACAGAGCTAGATTGGGCTGAAGCAGGTCTCCAAGTTTGTAAGCAGGGGTACAACATGCTGAATCTATTGATACACCGGAAAAATT TAAATTACCTCCACCTTGATTATAATTTTAACTTGAAGCCTGTGAAGACCCTTACGACAAAGGAACGCAAGAAGTCACGGTTTGGCAATGCTTTTCATCT TTGTCGTGAGATCTTGCGTTTGACAAAGCTTGTGGTTGATGCCAATATACAATTCAGGTTAGGTAATGTGGATGCTTTCCAATTGGCTGACGGTCTTCAG TATACATTTTCCCATGTTGGTCAGTTGACGGGAATGTACAGATACAAGTATAGGCTGATGCGCCAGATAAGAATGTGCAAAGATCTTAAGCATTTGATAT ATTACCGCTTCAATACTGGCCCAGTGGGTAAGGGACCTGGTTGTGGATTTTGGGCACCAATGTGGAGGGTATGGCTATTTTTCCTACGTGGCATAGTGCC TCTTCTTGAACGGTGGTTGGGTAATCTTCTTGCAAGACAGTTTGAAGGGCGCCATTCAAAAGGAACTGCCAAGACTGTTACAAAGCAGCGTGTCGAGAGC CACTTTGACTTGGAACTCCGTGCCGCTGTTATGCATGATGTTCTTGATGCCATGCCAGAGGGCATTAAGCAAAATAAGGCTAGAACGATACTGCAGCACC TTAGTGAGGCTTGGCGCTGCTGGAAAGCAAACATTCCATGGAAGGTTCCTGGTTTACCAGTTCCCATTGAAAACATGATACTTCGGTATGTTAAGTCAAA AGCAGACTGGTGGACGAATGTTGCTCACTATAATCGTGAGCGTATCAGAAGGGGTGCGACTGTTGACAAGACAGTATGCAGAAAGAATCTTGGAAGACTG ACTCGGTTGTGGTTAAAGGCAGAACAGGAACGTCAACACAACTATTTGAAGGATGGCCCATATGTCACTCCAGAAGAAGCTGTTGCGATTTACACAACTA CTGTCCATTGGTTGGAGTCCAGAAAGTTTTCACCAATTCCATTCCCTCCCTTGTCATACAAGCATGACACTAAGCTGCTTATCCTTGCTTTGGAAAGGTT GAAAGAGTCATACAGTGTGGCTGTGAGATTAAACCAACTGCAGAGGGAAGAACTAGGTCTTATTGAACAAGCTTATGACAACCCCCATGAGGCTTTATCA CGGATCAAGCGTCACCTGCTCACTCAGCGTGCTTTCAAAGAAGTGGGCATAGAGTTCATGGATTTGTACAGTTCTCTGATTCCGGTTTATGAAATTGAGC CTCTTGAAAAAATAACAGATGCTTATTTGGACCAATATCTGTGGTATGAAGGTGATAAGCGCCACCTCTTTCCAAACTGGATTAAACCTGCAGATTCCGA GCCACCACCACTGCTTGTCTATAAATGGTGTCAAGGCATAAACAATTTGCAAGGTATCTGGGACACAAGTGAGGGGCAGTGTGTGGTGATGCTTCAGACC AAGTTTGAGAAGTTCTTTGAAAAGATCGACTTGACAATGTTAAATAGGCTTCTTCGGTTGGTCCTTGACCACAATATTGCTGATTATGTGACTGCCAAGA ACAATGTTGTCCTTTCCTACAAGGACATGAGTCACACGAACTCGTATGGTTTGATACGTGGCCTTCAGTTTGCTTCTTTTGTGGTGCAGTATTATGGACT TGTGCTGGATCTCCTGCTTCTTGGATTGACCCGGGCCAGTGAGATCGCTGGTCCGCCACAAATGCCAAATGAATTTATCACCTACTGGGATACAAAGGTT GAGACACGACATCCAATTCGTCTTTATTCCAGGTACATAGACAGGGTGCATATATTGTTTCGGTTTACTCATGAAGAGGCCCGAGATCTAATACAACGAT ATCTCACTGAGCATCCTGATCCCAACAATGAAAATATGGTTGGGTATCAGAACAAGAAATGCTGGCCTAGAGATGCAAGGATGAGGCTTATGAAACATGA TGTCAATCTTGGGAGGAGTGTTTTCTGGGACATGAAGAATCGTCTCCCTCGAAGCATCACAACTTTAGAGTGGGAGAACAGCTTTGTTTCTGTTTACAGC AAGGACAACCCAAACCTGCTTTTCAGCATGTGTGGGTTTGAAGTTCGGATACTTCCTAAAATAAGAATGACTCAAGAAGCATTCAGCAATACAAGAGATG GTGTTTGGAATTTGCAGAATGAGCAGACCAAGGAACGGACCGCAGTTGCTTTTCTACGGGTTGATGATGAGCACATGAAAGTGTTTGAGAATCGTGTGAG GCAGATTCTGATGTCCTCAGGGTCAACTACTTTCACAAAGATTGTTAACAAATGGAATACAGCCTTGATTGGATTGATGACATATTTCCGTGAAGCAACT GTGCATACTCAAGAGCTGTTAGATTTGCTTGTAAAATGTGAAAATAAAATTCAAACCCGTATCAAGATTGGGCTAAACTCAAAAATGCCAAGCAGATTTC CTCCTGTTATCTTCTATACACCAAAAGAAATTGGAGGACTTGGCATGTTATCCATGGGTCACATATTGATCCCTCAAAGTGATCTTCGATATAGTCAGCA AACAGATGTTGGTGTAACCCATTTCAGGAGCGGAATGAGTCATGAGGAGGACCAGCTGATTCCAAATCTTTATCGGTACATTCAGCCATGGGAGAGTGAG TTCATTGACTCGCAGCGGGTTTGGGCAGAGTATGCATTGAAGAGGCAGGAAGCGCAGGCGCAAAATAGGCGTCTAACACTTGAAGATTTGGAAGATTCAT GGGACAGGGGAATTCCACGCATTAATACTCTTTTTCAGAAAGATCGTCACACTTTAGCATATGACAAAGGGTGGAGAGTGCGCACAGACTTCAAGCAATA CCAAGTTTTAAAACAAAATCCTTTCTGGTGGACGCACCAGAGACATGATGGAAAATTGTGGAACTTGAACAATTATCGAACTGATGTCATTCAAGCTCTT GGTGGTGTTGAAGGAATTCTTGAGCATACCTTGTTCAAAGGAACATATTTCCCAACTTGGGAAGGTCTCTTTTGGGAAAAGGCATCTGGCTTTGAGGAGT CCATGAAGTATAAGAAGCTTACTAATGCACAGAGATCTGGTCTGAACCAAATTCCTAACCGTAGATTTACACTTTGGTGGTCCCCCACAATAAACAGGGC AAATGTTTATGTGGGTTTTCAAGTGCAGTTAGATCTAACCGGCATCTTCATGCACGGGAAGATCCCGACCTTGAAGATTTCGCTGATTCAGATATTCCGT GCTCACTTGTGGCAGAAGATTCATGAGAGTGTTGTTATGGACCTCTGTCAGGTCTTGGATCAGGAACTGGATGCTTTGGAAATTGAGACTGTGCAGAAAG AAACAATCCATCCAAGGAAAAGTTATAAAATGAACAGCTCCTGTGCAGACGTTCTCCTTTTTGCTGCCCATAGATGGCCCATGTCAAAGCCTAGTCTTGT GGCTGAGTCAAAAGATGTGTTTGACCAGAAAGCAAGCAATAAATACTGGATAGATGTACAGCTGAGATGGGGAGACTATGATTCTCATGATATTGAGCGC TATACTAGGGCCAAATTTATGGATTACACAACAGACAACATGTCTATATATCCATCTCCAACTGGGGTTATGATTGGGCTTGATCTAGCGTACAATTTGC ACTCTGCATTTGGCAACTGGTTTCCGGGGTCTAAACCACTGCTAGCTCAAGCTATGAACAAAATAATGAAGTCAAACCCAGCTTTGTATGTCTTGAGGGA GCGCATAAGAAAAGGTTTGCAGTTGTATTCTTCAGAGCCTACAGAACCATATTTATCATCACAGAATTATGGGGAGATCTTTAGCAATCAGATAATATGG TTTGTTGATGATACTAATGTCTACCGTGTCACAATCCACAAGACATTTGAAGGGAATCTCACAACAAAACCCATAAATGGTGCAATCTTCATATTCAATC CGAGAACTGGGCAGCTATTTTTGAAGGTTATCCACACTAGTGTATGGGCAGGACAGAAACGTCTGGGCCAGCTTGCCAAGTGGAAAACTGCTGAAGAAGT TGCAGCTCTTGTGCGGTCTCTGCCTGTGGAAGAACAACCAAAACAAATTATTGTGACTCGCAAAGGGATGCTTGATCCATTGGAGGTTCACTTGCTTGAT TTCCCCAACATAGTTATCAAGGGAAGTGAGTTGCAGCTCCCATTCCAGTCATGCTTAAAGATAGAGAAATTTGGTGATTTGATTTTGAAGGCAACGGAAC CACAAATGGTTTTGTTCAATATTTATGATGATTGGCTGAAGAGTATATCATCTTACACTGCGTTCTCTCGGCTCATTCTGATTCTCCGTGCACTTCATGT TAATAATGAGAAGGCAAAGATGCTACTCAAGCCTGACAAGACTATCGTTACTGAGCCACACCACATCTGGCCTTCACTTACTGATGATCAGTGGATGAAA GTTGAGGTTGCTTTAAGGGATCTCATACTCTCTGACTATGCCAAGAAGAACAATGTGAACACCTCAGCACTGACACAATCTGAGATACGTGATATTATTC TTGGAGCTGAGATCACTCCTCCTTCTCAACAAAGGCAGCAGATAGCAGAGATTGAGAAACAGGCCAAAGAAGCGAGTCAACTGACAGCGGTCACCACAAG GACCACAAATGTGCATGGTGATGAACTCATTGTCACAACCACTAGTCCATATGAGCAAGCTGCGTTTGGTTCTAAAACAGATTGGCGTGTCAGAGCTATA TCTGCTACAAATCTCTATCTTCGAGTCAATCATATCTATGTGAATTCTGAGGATATCAAGGAAACTGGATACACATATATCATGCCGAAGAATATCTTGA AGAAGTTTATCTGTATAGCTGATCTGCGAACTCAAATTTCTGGGTATTTGTATGGTATAAGCCCCCCGGACAATCCTCAGGTCAAGGAAATCCGTTGTAT TGCTATGCCCCCACAGTGGGGGACTCATCAACAGGTTCATCTTCCATCAGCTCTTCCTGAGCATGATTTCCTCAATGATCTGGAGCCTTTGGGATGGATG CACACACAACCAAATGAGCTTCCTCAGTTATCACCACAGGATCTCACGGCTCATGCTCGGGTTTTGGAGAACAACAAGCAATGGGATGGAGAAAAGTGCA TCATCCTGACATGTAGTTTCACTCCAGGATCATGCTCGTTAACTGCATATAAGCTTACTCCTAGTGGTTATGAGTGGGGACGTGTCAACAAGGACACGGG AAGCAATCCTCATGGCTACCTGCCAACTCATTACGAGAAGGTTCAGATGCTCCTGAGCGACCGCTTCCTTGGTTTCTACATGATTCCTGATAACGGGCCA TGGAATTACAATTTTATGGGAGTGAAGCATACAGTGAGCATGAAATATGGAATCAAGCTGGGGACACCTCGAGAGTATTACCATGAGGACCATAGGCCAA CACATTTCCTGGAGTTCAGCAACCTGGAGGAGGGTGAGACCGCTGAAGGCGATAGAGAGGATACATTCACTTGA
AA sequence Show only first row Show all	>Potri.003G031900.1 pacid=42786122 polypeptide=Potri.003G031900.1.p locus=Potri.003G031900 ID=Potri.003G031900.1.v4.1 annot-version=v4.1 MWNDTGEQHIAPPGTAGPSIPPPPPSQPSYTVLAPSQTVSNPADAEAKLEEKARKWQQLNTKRYSDKRKFGFVETQKEDMPPEHVRKIIRDHGDMSSKKY RHDKRVYLGALKFIPHAVYKLLENMPMPWEQVRDVKVLYHITGAITFVNEIPWVVEPIYLAQWGTMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYADN LLDVDPLEPIQLELDEEEDSAVYTWFYDHKPLVKTKLINGPSYRKWHLSLPIMATLHRLAGQLLSDLIDRNYFYLFDMESFFTAKALNMCIPGGPKFEPL YRDMEKGDEDWNEFNDINKLIIRSPLRTEYRIAFPHLYNNRPRKVKLCVYHTPMIMYIKAEDPDLPAFYYDPLIHPITSSNKERREKKTHDDDDDDEDFV MPEGVEPFLEDTQLYTDTTAAGISLLFANRPFNMRSGRMRRAEDIPLVSEWYKEHCPPSYPVKVRVSYQKLLKCFVLNELHHRPPKAQKKKHLFRSLAAT KFFQTTELDWAEAGLQVCKQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLTKLVVDANIQFRLGNVDAFQLADGLQ YTFSHVGQLTGMYRYKYRLMRQIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPMWRVWLFFLRGIVPLLERWLGNLLARQFEGRHSKGTAKTVTKQRVES HFDLELRAAVMHDVLDAMPEGIKQNKARTILQHLSEAWRCWKANIPWKVPGLPVPIENMILRYVKSKADWWTNVAHYNRERIRRGATVDKTVCRKNLGRL TRLWLKAEQERQHNYLKDGPYVTPEEAVAIYTTTVHWLESRKFSPIPFPPLSYKHDTKLLILALERLKESYSVAVRLNQLQREELGLIEQAYDNPHEALS RIKRHLLTQRAFKEVGIEFMDLYSSLIPVYEIEPLEKITDAYLDQYLWYEGDKRHLFPNWIKPADSEPPPLLVYKWCQGINNLQGIWDTSEGQCVVMLQT KFEKFFEKIDLTMLNRLLRLVLDHNIADYVTAKNNVVLSYKDMSHTNSYGLIRGLQFASFVVQYYGLVLDLLLLGLTRASEIAGPPQMPNEFITYWDTKV ETRHPIRLYSRYIDRVHILFRFTHEEARDLIQRYLTEHPDPNNENMVGYQNKKCWPRDARMRLMKHDVNLGRSVFWDMKNRLPRSITTLEWENSFVSVYS KDNPNLLFSMCGFEVRILPKIRMTQEAFSNTRDGVWNLQNEQTKERTAVAFLRVDDEHMKVFENRVRQILMSSGSTTFTKIVNKWNTALIGLMTYFREAT VHTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVIFYTPKEIGGLGMLSMGHILIPQSDLRYSQQTDVGVTHFRSGMSHEEDQLIPNLYRYIQPWESE FIDSQRVWAEYALKRQEAQAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRTDFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDVIQAL GGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFR AHLWQKIHESVVMDLCQVLDQELDALEIETVQKETIHPRKSYKMNSSCADVLLFAAHRWPMSKPSLVAESKDVFDQKASNKYWIDVQLRWGDYDSHDIER YTRAKFMDYTTDNMSIYPSPTGVMIGLDLAYNLHSAFGNWFPGSKPLLAQAMNKIMKSNPALYVLRERIRKGLQLYSSEPTEPYLSSQNYGEIFSNQIIW FVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKVIHTSVWAGQKRLGQLAKWKTAEEVAALVRSLPVEEQPKQIIVTRKGMLDPLEVHLLD FPNIVIKGSELQLPFQSCLKIEKFGDLILKATEPQMVLFNIYDDWLKSISSYTAFSRLILILRALHVNNEKAKMLLKPDKTIVTEPHHIWPSLTDDQWMK VEVALRDLILSDYAKKNNVNTSALTQSEIRDIILGAEITPPSQQRQQIAEIEKQAKEASQLTAVTTRTTNVHGDELIVTTTSPYEQAAFGSKTDWRVRAI SATNLYLRVNHIYVNSEDIKETGYTYIMPKNILKKFICIADLRTQISGYLYGISPPDNPQVKEIRCIAMPPQWGTHQQVHLPSALPEHDFLNDLEPLGWM HTQPNELPQLSPQDLTAHARVLENNKQWDGEKCIILTCSFTPGSCSLTAYKLTPSGYEWGRVNKDTGSNPHGYLPTHYEKVQMLLSDRFLGFYMIPDNGP WNYNFMGVKHTVSMKYGIKLGTPREYYHEDHRPTHFLEFSNLEEGETAEGDREDTFT

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT1G80070		EMB33, EMB177, ...	ABNORMAL SUSPENSOR 2, EMBRYO D...		Potri.003G031900 [exp]	0	1	Pt-EMB177.4
AT3G44600		AtCYP71, CYP71	cyclophilin 71, cyclophilin71 ...		Potri.009G146400 [exp]	1.41	0.9161
AT4G31880			unknown protein		Potri.006G263300 [exp]	2.44	0.9080
AT4G21710		NRPB2, EMB1989	EMBRYO DEFECTIVE 1989, DNA-dir...		Potri.004G043200 [exp]	3.46	0.9001
AT4G35270		NLP2	Plant regulator RWP-RK family ...		Potri.009G166932 [exp]	4.58	0.8985
AT3G05680		EMB2016	embryo defective 2016 (.1.2)		Potri.016G069100 [exp]	5.65	0.9018
AT4G17330		ATG2484-1	G2484-1 protein (.1)		Potri.003G077600 [exp]	6.70	0.9014
AT5G15920		EMB2782, SMC5	EMBRYO DEFECTIVE 2782, structu...		Potri.001G262600 [exp]	7.48	0.8973
AT3G06480			DEAD box RNA helicase family p...		Potri.010G152400 [exp]	8.48	0.8813
AT3G26730			RING/U-box superfamily protein...		Potri.014G145300 [exp]	9.94	0.8944
AT3G54440			glycoside hydrolase family 2 p...		Potri.003G196500 [exp]	10.14	0.8360

Compare expression of checked genes

Potri.003G031900 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.