Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol	Pt-HSP91.3
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G79920 1281 / 0 AtHsp70-15 heat shock protein 70-15, Heat shock protein 70 (Hsp 70) family protein (.1), Heat shock protein 70 (Hsp 70) family protein (.2) AT1G79930 1277 / 0 AtHsp70-14, HSP91 heat shock protein 91 (.1.2) AT1G11660 704 / 0 heat shock protein 70 (Hsp 70) family protein (.1) AT1G16030 263 / 8e-77 HSP70B heat shock protein 70B (.1) AT5G02500 261 / 3e-76 AtHsp70-1, AT-HSC70-1, HSP70-1, HSC70-1 HEAT SHOCK PROTEIN 70-1, ARABIDOPSIS THALIANA HEAT SHOCK COGNATE PROTEIN 70-1, heat shock cognate protein 70-1 (.1.2) AT3G12580 258 / 5e-75 ATHSP70, HSP70 ARABIDOPSIS HEAT SHOCK PROTEIN 70, heat shock protein 70 (.1) AT3G09440 254 / 8e-74 Heat shock protein 70 (Hsp 70) family protein (.1), Heat shock protein 70 (Hsp 70) family protein (.2) AT1G09080 252 / 6e-73 BIP3 binding protein 3, Heat shock protein 70 (Hsp 70) family protein (.1), Heat shock protein 70 (Hsp 70) family protein (.2) AT5G02490 249 / 1e-71 AtHsp70-2 Heat shock protein 70 (Hsp 70) family protein (.1) AT1G56410 247 / 2e-71 HSP70T-1, ERD2 HEAT SHOCK PROTEIN 70T-1, EARLY-RESPONSIVE TO DEHYDRATION 2, heat shock protein 70 (Hsp 70) family protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.001G180100 [exp] 1413 / 0 AT1G79920 1262 / 0.0 heat shock protein 70-15, Heat shock protein 70 (Hsp 70) family protein (.1), Heat shock protein 70 (Hsp 70) family protein (.2) Potri.011G139100 [exp] 796 / 0 AT1G11660 990 / 0.0 heat shock protein 70 (Hsp 70) family protein (.1) Potri.004G016700 [exp] 734 / 0 AT1G11660 1025 / 0.0 heat shock protein 70 (Hsp 70) family protein (.1) Potri.001G042700 [exp] 277 / 5e-82 AT3G12580 1058 / 0.0 ARABIDOPSIS HEAT SHOCK PROTEIN 70, heat shock protein 70 (.1) Potri.001G042600 [exp] 264 / 3e-77 AT3G12580 1061 / 0.0 ARABIDOPSIS HEAT SHOCK PROTEIN 70, heat shock protein 70 (.1) Potri.010G206600 [exp] 263 / 7e-77 AT3G12580 1181 / 0.0 ARABIDOPSIS HEAT SHOCK PROTEIN 70, heat shock protein 70 (.1) Potri.003G184000 [exp] 262 / 1e-76 AT3G12580 1040 / 0.0 ARABIDOPSIS HEAT SHOCK PROTEIN 70, heat shock protein 70 (.1) Potri.008G054000 [exp] 261 / 2e-76 AT5G02500 1160 / 0.0 HEAT SHOCK PROTEIN 70-1, ARABIDOPSIS THALIANA HEAT SHOCK COGNATE PROTEIN 70-1, heat shock cognate protein 70-1 (.1.2) Potri.010G205800 [exp] 259 / 1e-75 AT5G02500 1142 / 0.0 HEAT SHOCK PROTEIN 70-1, ARABIDOPSIS THALIANA HEAT SHOCK COGNATE PROTEIN 70-1, heat shock cognate protein 70-1 (.1.2)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10037529 [exp] 1249 / 0 AT1G79930 1313 / 0.0 heat shock protein 91 (.1.2) Lus10011461 [exp] 1211 / 0 AT1G79930 1282 / 0.0 heat shock protein 91 (.1.2) Lus10037531 [exp] 1202 / 0 AT1G79920 1269 / 0.0 heat shock protein 70-15, Heat shock protein 70 (Hsp 70) family protein (.1), Heat shock protein 70 (Hsp 70) family protein (.2) Lus10011463 [exp] 1097 / 0 AT1G79920 1167 / 0.0 heat shock protein 70-15, Heat shock protein 70 (Hsp 70) family protein (.1), Heat shock protein 70 (Hsp 70) family protein (.2) Lus10019627 [exp] 747 / 0 AT1G11660 916 / 0.0 heat shock protein 70 (Hsp 70) family protein (.1) Lus10040078 [exp] 601 / 0 AT1G11660 919 / 0.0 heat shock protein 70 (Hsp 70) family protein (.1) Lus10005953 [exp] 263 / 5e-77 AT5G02500 1207 / 0.0 HEAT SHOCK PROTEIN 70-1, ARABIDOPSIS THALIANA HEAT SHOCK COGNATE PROTEIN 70-1, heat shock cognate protein 70-1 (.1.2) Lus10002319 [exp] 263 / 7e-77 AT3G12580 1160 / 0.0 ARABIDOPSIS HEAT SHOCK PROTEIN 70, heat shock protein 70 (.1) Lus10025333 [exp] 257 / 1e-74 AT5G02500 1236 / 0.0 HEAT SHOCK PROTEIN 70-1, ARABIDOPSIS THALIANA HEAT SHOCK COGNATE PROTEIN 70-1, heat shock cognate protein 70-1 (.1.2) Lus10017306 [exp] 253 / 1e-72 AT5G28540 1169 / 0.0 heat shock protein 70 (Hsp 70) family protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0108 [poplar] [flax] Actin_ATPase PF00012 [poplar] [flax] HSP70 Hsp70 protein
Representative CDS sequence Show only first row Show all	>Potri.003G055800.1 pacid=42786891 polypeptide=Potri.003G055800.1.p locus=Potri.003G055800 ID=Potri.003G055800.1.v4.1 annot-version=v4.1 ATGAGTGTGGTGGGTTTTGATTTTGGTAATGAGAACTGCCTTGTTGCTGTTGCGAGGCAAAGAGGGATTGATGTTGTGCTTAATGATGAATCCAAGCGTG AGACTCCTGCTATTGTATGTTTCGGTGACAAACAGCGGTTCATTGGGACTGCGGGGGCTGCCTCCACTATGATGAACCCCAAAAACTCAATTTCCCAGAT TAAGCGGTTAATTGGGCGCCCATTTTCTGATCCTGAATTGCAAAGGGATCTGAAGTCATTTCCTTATACAGTCACTGAAGGTCCCGATGGATTTCCTTTA ATTCACGCTCAGTACTTGGGTGAGATGAGGACATTCACACCTACCCAAGTCTTGGGAATGGTGTTTTCAGATTTGAAAATCATTGCTCAGAAAAATCTGA ATGCAGCAGTGGTGGATTGCTGCATTGGTATTCCGGTATATTTCACTGACCTTCAAAGGAGGGCCGTCTTGGATGCAGCCACAATTGCTGAATTGCATCC TCTCCGTTTGATGCATGAGACCACAGCTACAGCACTGGCTTATGGTATTTATAAGACTGACTTGCCTGAGAACGACCAATTGAATGTTGCTTTTGTTGAT GTTGGACATGCCAGCCTGCAAGTGTGCATTGCTGGATTCAAGAAAGGTCAACTTAAGATTTTGGCTCATTCTTATGATCGGTCCTTGGGTGGTAGAGATT TTGATGAGGCTCTGTTCCACCACTTCGCCACCAAGTTTAAGGCAGAGTATCACATTGATGTTCTCCAGAATGCGAGAGCATGCCTTAGGCTTAGGGCTGC TTGTGAGAAGCTGAAGAAGGTCCTTAGTGCCAACCCCGTGGCACCTCTTAATATTGAATGCTTAATGGATGAGAAGGATGTCAGAGGCGTCATTAAGAGG GAAGAGTTTGAACAAATTAGTACTCCGATATTGGAGCGTGTGAAGAGGCCTTTGGAGAAGGCACTTCAAGATGCTGGACTTGCAGTTGAGAATGTTCATA TGGTTGAAGTGGTTGGCTCTGCTTCTCGCATACCTGCCGTAATGAAGATTTTGACCGAGTTCTTTGGAAAGGAACCTAGGCGTACAATGAATGCTAGTGA ATGTGTTTCCAGGGGATGTGCACTGCAGTGTGCTATTCTCAGTCCCACTTTTAAAGTGCGAGATTTCCAGGTCCATGAATGCTTCCCATTTTCAATTGCT GTATCATGGAAAGGTGGGGCGCTAGATTCTCAGAATGGAGCAGCAGATCATCAACAGGGCACAATTGTCTTCCCCAAGGGAAATCCCATCCCTAGTATCA AGGCTTTGACATTCTATAGGTCAGGGACGTTCTCCATTGATGTACAATATTCTGATGTCAGTGAATTGCAGGCACCAGCTAAGATCAGTACATATACGAT CGGTCCTTTCCAATGTACAAAAAGTGAACGTGCAAAAGTGAAGGTGAAAGTCCGTTTGAGTCTACATGGGATTGTGTCTGTTGAATCAGCAACACTTTTG GAGGAAGAAGAGGTTGAAGTTCCTGTTGTGAAAGAGCCAGCAAAGGAACCTACCAAGATGGATACTGATGAATCTCTCAGTGATGCCACCACTACAGGCC CTAATGAAGCAGATGACAACATGCAAGATGAAAAAGCAGCTGCTGATGCATCTGGGACTGAAAATGGGGTTCCTGAGTCTGACAAGCCAACACAAATGGA AACTGATACCAAGGTTGAGGCTCCCAAAAAGAAAGTAAAGAAAACAAATATCCCTGTGTCAGAGGTGGTTTATGGCGGAATACCAGCAGCAGAAGTGCAA AAGTTACTAGAAAAAGAATACGAAATGGCATTGCAAGACCGGGTTATGGAGGAAACAAAAGATAAGAAAAATGCTGTTGAAGCTTATGTCTACGATATGA GGAACAAGTTAAGTGACAAATACCATGAATTTGTTCCTGATCTGGAGAGGGAGGGATTCACAGCTAAACTGCAGGAGACAGAGGATTGGTTGTATGAAGA TGGTGAAGATGAAACCAAAGGTGTTTACATTGCCAAGCTTGAGGAGCTCAAGAAACAAGGTGATCCTATTGAAGAGCGGTACAAGGAGTACACAGATAGG GGATCTGTGATTGATCAACTTGTTTATTGTATTAATAGTTACAGAGAGGCAGCAATGTCTGGTGATCTTAAATTCGATCACATTGACATGGCAGAAAAGC AGAAGGTATTGAATGAGTGTGTTGAAGCTGAAGCCTGGTTAAGAGAGAAAAAGCAACACCAGGACTCACTTCCCAAGCATGCTACTCCAGTTCTTCTGTC AGCTGATGTGAGAAAGAAGGCCGAGGCACTTGATAGGTTTTGCAGGCCTATAATGACAAAACCAAAACCAAAACCAGCCAAACCAACCACTCCTGAGACA CCAGCAACCCCACCATCTCAGGGTAGCGAACAACAGCAGGGAGGAGATGCAAATGCAGACCCCAATGCTAACGCAGGTGCCCATGAGACTGCCGGAGCTG CCGGTGGTGAGGTGCCACCTGCTTCTGGAGAACCAATGGAGACAGACAAGCCAGAGACTGCCTCTGGTGCTGCATAA
AA sequence Show only first row Show all	>Potri.003G055800.1 pacid=42786891 polypeptide=Potri.003G055800.1.p locus=Potri.003G055800 ID=Potri.003G055800.1.v4.1 annot-version=v4.1 MSVVGFDFGNENCLVAVARQRGIDVVLNDESKRETPAIVCFGDKQRFIGTAGAASTMMNPKNSISQIKRLIGRPFSDPELQRDLKSFPYTVTEGPDGFPL IHAQYLGEMRTFTPTQVLGMVFSDLKIIAQKNLNAAVVDCCIGIPVYFTDLQRRAVLDAATIAELHPLRLMHETTATALAYGIYKTDLPENDQLNVAFVD VGHASLQVCIAGFKKGQLKILAHSYDRSLGGRDFDEALFHHFATKFKAEYHIDVLQNARACLRLRAACEKLKKVLSANPVAPLNIECLMDEKDVRGVIKR EEFEQISTPILERVKRPLEKALQDAGLAVENVHMVEVVGSASRIPAVMKILTEFFGKEPRRTMNASECVSRGCALQCAILSPTFKVRDFQVHECFPFSIA VSWKGGALDSQNGAADHQQGTIVFPKGNPIPSIKALTFYRSGTFSIDVQYSDVSELQAPAKISTYTIGPFQCTKSERAKVKVKVRLSLHGIVSVESATLL EEEEVEVPVVKEPAKEPTKMDTDESLSDATTTGPNEADDNMQDEKAAADASGTENGVPESDKPTQMETDTKVEAPKKKVKKTNIPVSEVVYGGIPAAEVQ KLLEKEYEMALQDRVMEETKDKKNAVEAYVYDMRNKLSDKYHEFVPDLEREGFTAKLQETEDWLYEDGEDETKGVYIAKLEELKKQGDPIEERYKEYTDR GSVIDQLVYCINSYREAAMSGDLKFDHIDMAEKQKVLNECVEAEAWLREKKQHQDSLPKHATPVLLSADVRKKAEALDRFCRPIMTKPKPKPAKPTTPET PATPPSQGSEQQQGGDANADPNANAGAHETAGAAGGEVPPASGEPMETDKPETASGAA

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT1G79920		AtHsp70-15	heat shock protein 70-15, Heat...		Potri.003G055800 [exp]	0	1	Pt-HSP91.3
AT5G09590		HSC70-5, mtHSC7...	HEAT SHOCK COGNATE, mitochondr...		Potri.001G285500 [exp]	3.16	0.9517
AT5G48570		ROF2, ATFKBP65	FKBP-type peptidyl-prolyl cis-...		Potri.014G149400 [exp]	4.24	0.9635
					Potri.010G110751 [exp]	8.66	0.9493
AT3G25230		ROF1, ATFKBP62	FK506 BINDING PROTEIN 62, rota...		Potri.002G248300 [exp]	11.31	0.9242
AT4G39210		APL3	Glucose-1-phosphate adenylyltr...		Potri.004G157100 [exp]	11.53	0.9453	APL3.1
AT3G09350		Fes1A	Fes1A (.1.2.3)		Potri.006G088000 [exp]	12.16	0.9488
AT2G27285			Coiled-coil domain-containing ...		Potri.009G162500 [exp]	13.30	0.8174
AT5G52640		AtHsp90-1, ATHS...	HEAT SHOCK PROTEIN 83, HEAT SH...		Potri.004G073600 [exp]	14.83	0.9466
AT4G10250		ATHSP22.0	HSP20-like chaperones superfam...		Potri.013G089200 [exp]	15.87	0.9463
AT5G26731			unknown protein		Potri.005G000401 [exp]	15.96	0.9342

Compare expression of checked genes

Potri.003G055800 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.