Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol	ALDH7.2
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G54100 850 / 0 ALDH7B4 aldehyde dehydrogenase 7B4 (.1.2) AT1G79440 197 / 8e-57 ENF1, SSADH1, ALDH5F1 SUCCINIC SEMIALDEHYDE DEHYDROGENASE 1, SUCCINIC SEMIALDEHYDE DEHYDROGENASE, ENLARGED FIL EXPRESSION DOMAIN 1, aldehyde dehydrogenase 5F1 (.1) AT1G74920 190 / 4e-54 ALDH10A8 aldehyde dehydrogenase 10A8 (.1.2) AT1G23800 183 / 2e-51 ALDH2B7 aldehyde dehydrogenase 2B7 (.1) AT3G48000 179 / 1e-49 ALDH2A, ALDH2B4 aldehyde dehydrogenase 2A, aldehyde dehydrogenase 2B4 (.1) AT3G24503 177 / 3e-49 ALDH1A, REF1, ALDH2C4 REDUCED EPIDERMAL FLUORESCENCE1, aldehyde dehydrogenase 1A, aldehyde dehydrogenase 2C4 (.1) AT3G48170 169 / 2e-46 ALDH10A9 aldehyde dehydrogenase 10A9 (.1) AT2G14170 141 / 2e-36 ALDH6B2 aldehyde dehydrogenase 6B2 (.1.2.3) AT2G24270 125 / 1e-30 ALDH11A3 aldehyde dehydrogenase 11A3 (.1.2.3.4) AT3G66658 116 / 1e-27 ALDH22A1 aldehyde dehydrogenase 22A1 (.1.2)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.001G167100 [exp] 959 / 0 AT1G54100 823 / 0.0 aldehyde dehydrogenase 7B4 (.1.2) Potri.012G075600 [exp] 196 / 3e-56 AT1G74920 861 / 0.0 aldehyde dehydrogenase 10A8 (.1.2) Potri.010G174000 [exp] 195 / 8e-56 AT1G79440 810 / 0.0 SUCCINIC SEMIALDEHYDE DEHYDROGENASE 1, SUCCINIC SEMIALDEHYDE DEHYDROGENASE, ENLARGED FIL EXPRESSION DOMAIN 1, aldehyde dehydrogenase 5F1 (.1) Potri.015G070600 [exp] 189 / 9e-54 AT1G74920 896 / 0.0 aldehyde dehydrogenase 10A8 (.1.2) Potri.002G189900 [exp] 184 / 1e-51 AT1G23800 899 / 0.0 aldehyde dehydrogenase 2B7 (.1) Potri.015G074100 [exp] 181 / 9e-51 AT3G48000 885 / 0.0 aldehyde dehydrogenase 2A, aldehyde dehydrogenase 2B4 (.1) Potri.012G078700 [exp] 180 / 2e-50 AT3G48000 872 / 0.0 aldehyde dehydrogenase 2A, aldehyde dehydrogenase 2B4 (.1) Potri.018G075000 [exp] 162 / 7e-44 AT3G24503 751 / 0.0 REDUCED EPIDERMAL FLUORESCENCE1, aldehyde dehydrogenase 1A, aldehyde dehydrogenase 2C4 (.1) Potri.001G283100 [exp] 155 / 3e-41 AT2G14170 891 / 0.0 aldehyde dehydrogenase 6B2 (.1.2.3)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10013155 [exp] 877 / 0 AT1G54100 886 / 0.0 aldehyde dehydrogenase 7B4 (.1.2) Lus10008117 [exp] 876 / 0 AT1G54100 883 / 0.0 aldehyde dehydrogenase 7B4 (.1.2) Lus10034115 [exp] 179 / 2e-49 AT3G48170 825 / 0.0 aldehyde dehydrogenase 10A9 (.1) Lus10042149 [exp] 173 / 9e-48 AT1G74920 850 / 0.0 aldehyde dehydrogenase 10A8 (.1.2) Lus10029166 [exp] 173 / 1e-47 AT1G23800 886 / 0.0 aldehyde dehydrogenase 2B7 (.1) Lus10012999 [exp] 170 / 2e-46 AT1G23800 889 / 0.0 aldehyde dehydrogenase 2B7 (.1) Lus10001845 [exp] 167 / 1e-45 AT1G79440 741 / 0.0 SUCCINIC SEMIALDEHYDE DEHYDROGENASE 1, SUCCINIC SEMIALDEHYDE DEHYDROGENASE, ENLARGED FIL EXPRESSION DOMAIN 1, aldehyde dehydrogenase 5F1 (.1) Lus10023625 [exp] 164 / 2e-44 AT3G24503 749 / 0.0 REDUCED EPIDERMAL FLUORESCENCE1, aldehyde dehydrogenase 1A, aldehyde dehydrogenase 2C4 (.1) Lus10043470 [exp] 163 / 2e-44 AT1G74920 818 / 0.0 aldehyde dehydrogenase 10A8 (.1.2) Lus10023626 [exp] 162 / 1e-43 AT3G24503 753 / 0.0 REDUCED EPIDERMAL FLUORESCENCE1, aldehyde dehydrogenase 1A, aldehyde dehydrogenase 2C4 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0099 [poplar] [flax] ALDH-like PF00171 [poplar] [flax] Aldedh Aldehyde dehydrogenase family
Representative CDS sequence Show only first row Show all	>Potri.003G067700.8 pacid=42785200 polypeptide=Potri.003G067700.8.p locus=Potri.003G067700 ID=Potri.003G067700.8.v4.1 annot-version=v4.1 ATGGGTTTTGCAAGGAAAGAGTATGAGTTTTTGAGTGAGATCGGGCTGAGCTCTCGCAATTTGGGTTGTTATGTAGATGGCACGTGGAAAGCAAATGGCC CTGTGGTCACCAGTGTGAATCCTGCAAACAATCAGGCTATAGCTGAAGTTGTGGAGGGTTCCATTGAAGATTATGAGGAAGGCATGCGAGCTTGCAGTGA AGCTGCTAAGATATGGATGCAGGTTCCTTCTCCAAAGAGAGGTGAGATTGTCAGACAGATTGGGGATGCATTGAGAACTAAACTTCAGCAGCTTGGTCGC CTTGTCTCACTCGAGATGGGAAAAATACTCCCTGAAGGAATAGGGGAAGTTCAAGAAATAATTGATATGTGTGATTTTTCTGTGGGCTTAAGTAGACAAC TGAATGGATCAGTGATACCTTCAGAACGTCCAAATCATGCAATGTTGGAGATGTGGAATCCTCTTGGAATCGTTGGTGTGATTACGGCTTTCAACTTCCC ATGCGCTGTTCTTGGATGGAATGCTTGCATTGCACTAGTCTGTGGCAATTGTGTTGTCTGGAAAGGTGCACCGACAACTCCTTTGATTACCATTGCAATG ACAAGGCTAGTAGCTGGGGTGTTAGAGAAGAATAACTTGCCTCCTGCAATTTTTACATCTTTTTGTGGTGGTGCTGATATTGGTCAAGCAGTAGCAAAAG ATACACGAATTCCTCTGGTTTCTTTCACTGGCAGTTCGAAGGTGGGTCTAATGGTCCAACAGATAGTTAATCAGAGATTTGGTAAATGCTTGCTTGAGTT AAGTGGGAATAATGCTATAATAGTCATGGATGATGCTAACATCCAGCTAGCTGTTCGTTCTGTTATGTTTGCTGCTGTTGGGACAGCTGGTCAGCGTTGC ACAACATGCCGCAGGCTGCTTCTACATGAGAGCATATATCAGAGAGTACTTGATCAACTACTTGATGTGTACAAGCAAGTTAAAATTGGGGATCCATTGG AAAAAGGCACCTTGCTCGGGCCACTGCATACTTCTGAATCAAGAAAGAGCTTTGAAAAGGGAATAGAGATAATTAAGTCCCAGGGAGGTAAGATCATAAC GGGTGGTTCTGTGATTGAATCTGAGGGGAATTTCGTGCAGCCCACAATAGTTGAGATTTCTCCAAATGCAGACGTTGTTAAAGAAGAGTTATTTGCTCCT GTTCTTTACGTTATGAAATTTCAGACTTTACAAGAAGCAATTGAAATAAACAATTCAGTTCCTCAAGGATTAAGTAGTTCTATTTTCACCCGCCAACCTG GAGTTATCTTCAAGTGGATTGGGCCTCAAGGAAGTGATTGTGGTATTGTGAATGTAAATATACCAACAAATGGTGCTGAAATTGGTGGTGCTTTTGGTGG AGAAAAGGCTACAGGGGGTGGCCGTGAAGCAGGAAGTGATTCTTGGAAGCAATACATGAGACGCTCAACTTGTACGATCAATTATGGGAATGAGTTACCA CTGGCACAAGGAATCAATTTTGGGTAG
AA sequence Show only first row Show all	>Potri.003G067700.8 pacid=42785200 polypeptide=Potri.003G067700.8.p locus=Potri.003G067700 ID=Potri.003G067700.8.v4.1 annot-version=v4.1 MGFARKEYEFLSEIGLSSRNLGCYVDGTWKANGPVVTSVNPANNQAIAEVVEGSIEDYEEGMRACSEAAKIWMQVPSPKRGEIVRQIGDALRTKLQQLGR LVSLEMGKILPEGIGEVQEIIDMCDFSVGLSRQLNGSVIPSERPNHAMLEMWNPLGIVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAM TRLVAGVLEKNNLPPAIFTSFCGGADIGQAVAKDTRIPLVSFTGSSKVGLMVQQIVNQRFGKCLLELSGNNAIIVMDDANIQLAVRSVMFAAVGTAGQRC TTCRRLLLHESIYQRVLDQLLDVYKQVKIGDPLEKGTLLGPLHTSESRKSFEKGIEIIKSQGGKIITGGSVIESEGNFVQPTIVEISPNADVVKEELFAP VLYVMKFQTLQEAIEINNSVPQGLSSSIFTRQPGVIFKWIGPQGSDCGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTINYGNELP LAQGINFG

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT1G54100		ALDH7B4	aldehyde dehydrogenase 7B4 (.1...		Potri.003G067700 [exp]	0	1	ALDH7.2
AT1G47128		RD21A, RD21	RESPONSIVE TO DEHYDRATION 21A,...		Potri.009G098100 [exp]	3.74	0.9349
AT5G51070		SAG15, CLPD, ER...	SENESCENCE ASSOCIATED GENE 15,...		Potri.015G110000 [exp]	18.70	0.9263	Pt-ERD1.3
AT2G45900			Phosphatidylinositol N-acetygl...		Potri.001G103400 [exp]	22.53	0.9192
AT4G32250			Protein kinase superfamily pro...		Potri.006G255700 [exp]	24.39	0.9145
AT4G22920		ATNYE1, SGR1, S...	non-yellowing 1 (.1)		Potri.001G112600 [exp]	25.39	0.9249
AT5G45890		SAG12	senescence-associated gene 12 ...		Potri.004G055900 [exp]	25.45	0.8995
AT1G75290			NAD(P)-binding Rossmann-fold s...		Potri.008G116500 [exp]	33.94	0.8811
AT2G33150		PED1, KAT2, PKT...	PEROXISOME DEFECTIVE 1, 3-KETO...		Potri.001G051900 [exp]	34.20	0.8684
AT5G13080	WRKY	ATWRKY75, WRKY7...	ARABIDOPSIS THALIANA WRKY DNA-...		Potri.015G099200 [exp]	34.87	0.8895
AT2G15490		UGT73B4	UDP-glycosyltransferase 73B4 (...		Potri.006G048200 [exp]	44.39	0.8919	ZOG1.17

Compare expression of checked genes

Potri.003G067700 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.