Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol	Pt-BOU.2
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G46800 443 / 3e-158 BOU A BOUT DE SOUFFLE, Mitochondrial substrate carrier family protein (.1) AT2G33820 150 / 3e-43 ATMBAC1 Mitochondrial substrate carrier family protein (.1) AT1G79900 132 / 2e-36 ATMBAC2, BAC2 RABIDOPSIS MITOCHONDRIAL BASIC AMINO ACID CARRIER 2, Mitochondrial substrate carrier family protein (.1) AT5G48970 103 / 3e-25 Mitochondrial substrate carrier family protein (.1) AT1G25380 100 / 7e-24 ATNDT2 NAD+ transporter 2, ARABIDOPSIS THALIANA NAD+ TRANSPORTER 2, NAD+ transporter 2 (.1) AT4G01100 94 / 7e-22 ADNT1 adenine nucleotide transporter 1 (.1.2) AT2G47490 87 / 1e-19 ATNDT1 NAD+ transporter 1, ARABIDOPSIS THALIANA NAD+ TRANSPORTER 1, NAD+ transporter 1 (.1) AT3G21390 85 / 9e-19 Mitochondrial substrate carrier family protein (.1) AT5G58970 83 / 4e-18 ATUCP2 uncoupling protein 2 (.1.2) AT3G54110 81 / 2e-17 ATUCP1, UCP1, UCP2, UCP, ATPUMP1 ARABIDOPSIS THALIANA UNCOUPLING PROTEIN 1, ARABIDOPSIS THALIANA PLANT UNCOUPLING MITOCHONDRIAL PROTEIN 1, plant uncoupling mitochondrial protein 1 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.001G142600 [exp] 508 / 0 AT5G46800 434 / 1e-154 A BOUT DE SOUFFLE, Mitochondrial substrate carrier family protein (.1) Potri.004G046801 [exp] 154 / 6e-45 AT2G33820 453 / 4e-162 Mitochondrial substrate carrier family protein (.1) Potri.011G056000 [exp] 151 / 1e-43 AT2G33820 460 / 9e-165 Mitochondrial substrate carrier family protein (.1) Potri.001G182000 [exp] 140 / 1e-39 AT1G79900 424 / 1e-150 RABIDOPSIS MITOCHONDRIAL BASIC AMINO ACID CARRIER 2, Mitochondrial substrate carrier family protein (.1) Potri.003G053900 [exp] 134 / 4e-37 AT1G79900 419 / 2e-148 RABIDOPSIS MITOCHONDRIAL BASIC AMINO ACID CARRIER 2, Mitochondrial substrate carrier family protein (.1) Potri.001G094100 [exp] 97 / 7e-23 AT4G01100 563 / 0.0 adenine nucleotide transporter 1 (.1.2) Potri.002G200900 [exp] 96 / 1e-22 AT2G47490 471 / 1e-168 NAD+ transporter 1, ARABIDOPSIS THALIANA NAD+ TRANSPORTER 1, NAD+ transporter 1 (.1) Potri.010G024100 [exp] 96 / 2e-22 AT5G48970 528 / 0.0 Mitochondrial substrate carrier family protein (.1) Potri.003G137500 [exp] 95 / 3e-22 AT4G01100 618 / 0.0 adenine nucleotide transporter 1 (.1.2)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10004565 [exp] 468 / 3e-168 AT5G46800 481 / 2e-173 A BOUT DE SOUFFLE, Mitochondrial substrate carrier family protein (.1) Lus10000906 [exp] 468 / 3e-168 AT5G46800 482 / 1e-173 A BOUT DE SOUFFLE, Mitochondrial substrate carrier family protein (.1) Lus10015420 [exp] 137 / 2e-38 AT2G33820 415 / 7e-147 Mitochondrial substrate carrier family protein (.1) Lus10037544 [exp] 137 / 4e-38 AT1G79900 408 / 2e-144 RABIDOPSIS MITOCHONDRIAL BASIC AMINO ACID CARRIER 2, Mitochondrial substrate carrier family protein (.1) Lus10011451 [exp] 131 / 4e-36 AT1G79900 410 / 4e-145 RABIDOPSIS MITOCHONDRIAL BASIC AMINO ACID CARRIER 2, Mitochondrial substrate carrier family protein (.1) Lus10033948 [exp] 100 / 3e-24 AT4G01100 604 / 0.0 adenine nucleotide transporter 1 (.1.2) Lus10033947 [exp] 100 / 5e-24 AT4G01100 602 / 0.0 adenine nucleotide transporter 1 (.1.2) Lus10032365 [exp] 100 / 7e-24 AT4G01100 602 / 0.0 adenine nucleotide transporter 1 (.1.2) Lus10013998 [exp] 93 / 3e-22 AT2G33820 215 / 3e-69 Mitochondrial substrate carrier family protein (.1) Lus10034104 [exp] 94 / 8e-22 AT1G25380 414 / 3e-145 NAD+ transporter 2, ARABIDOPSIS THALIANA NAD+ TRANSPORTER 2, NAD+ transporter 2 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF00153 [poplar] [flax] Mito_carr Mitochondrial carrier protein
Representative CDS sequence Show only first row Show all	>Potri.003G091500.6 pacid=42786916 polypeptide=Potri.003G091500.6.p locus=Potri.003G091500 ID=Potri.003G091500.6.v4.1 annot-version=v4.1 ATGGGGGACGTAGCGAAGGACTTGACTGCCGGGACAATCGGTGGTGTAGCACAATTGATAGTCGGGCACCCCTTTGACACCATCAAGGTCAAGCTCCAAA GCCAGCCTGCCCCACTCCCTGGCCAAGCTCCCAAGTATGCTGGTGCAGTGGATGCTGTCAAGCAGACTTTATCTGCTGAAGGCCCAAGGGGGTTATACAA AGGTATGGGAGCTCCACTTGCTACTGTGGCAGCCTTCAATGCTGTTCTTTTCACAGTGAGGGGACAAATGGAGGGATTGTTAAGGTCTCAACCTGGTGCC CCACTTACAGTTAACCAGCAAGTTGTTGCTGGTGCGGGTGCTGGAGTTGCTGTTTCTTTTCTTGCTTGTCCCACTGAATTGATCAAATGCAGGTTGCAAG CACAAAGTGCTTTGGCAAGTTCAGACTCAGCAGTGGTGGCTGTGAAGTATGGGGGGCCAATGGATGTGACCAGGCATGTTCTCAAATCAGAAGGTGGTGT GAGGGGTCTCTTCAAGGGCTTGGTTCCTACTATGGCACGTGAAATTCCTGGAAATGCTGCTATGTTTGGTGTCTATGAATTGCTGAAGCAGTCCTTTGCA GGAGGTGAGGATACTTCTCAGTTGGGAAGGGGCTCTTTGATGGTGGCCGGTGGCTTAGCTGGCGCTTCCTTTTGGGTATCTGTCTACCCCACTGATGTTG TTAAAAGCGTCATTCAAGTAGATGATTACAAAAACCCCAAGTTCTCTGGGTCTATTGATGCTTTTAGGAAGATCCTGGCTTCTGAAGGTATCAAAGGCCT GTACAAAGGTTTTGGCCCTGCCATGGCTAGAAGTGTCCCTGCAAATGCAGCATGCTTCTTGGCATATGAGGTGACAAGGTCAAGCATGGGGTGA
AA sequence Show only first row Show all	>Potri.003G091500.6 pacid=42786916 polypeptide=Potri.003G091500.6.p locus=Potri.003G091500 ID=Potri.003G091500.6.v4.1 annot-version=v4.1 MGDVAKDLTAGTIGGVAQLIVGHPFDTIKVKLQSQPAPLPGQAPKYAGAVDAVKQTLSAEGPRGLYKGMGAPLATVAAFNAVLFTVRGQMEGLLRSQPGA PLTVNQQVVAGAGAGVAVSFLACPTELIKCRLQAQSALASSDSAVVAVKYGGPMDVTRHVLKSEGGVRGLFKGLVPTMAREIPGNAAMFGVYELLKQSFA GGEDTSQLGRGSLMVAGGLAGASFWVSVYPTDVVKSVIQVDDYKNPKFSGSIDAFRKILASEGIKGLYKGFGPAMARSVPANAACFLAYEVTRSSMG

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT5G46800		BOU	A BOUT DE SOUFFLE, Mitochondri...		Potri.003G091500 [exp]	0	1	Pt-BOU.2
AT1G11790		AtADT1, ADT1	Arabidopsis thaliana arogenate...		Potri.011G004700 [exp]	1.73	0.7999
AT5G03250			Phototropic-responsive NPH3 fa...		Potri.016G090400 [exp]	5.09	0.7568
AT1G04650			unknown protein		Potri.001G053000 [exp]	6.00	0.8021
AT5G03300		ADK2	adenosine kinase 2 (.1)		Potri.008G038100 [exp]	7.54	0.8578
AT2G16980			Major facilitator superfamily ...		Potri.008G022100 [exp]	7.68	0.7223
AT5G11960			Protein of unknown function (D...		Potri.006G226000 [exp]	10.58	0.7565
AT5G12470			Protein of unknown function (D...		Potri.009G051800 [exp]	16.73	0.7477
AT2G33120		ATVAMP722, SAR1	ARABIDOPSIS THALIANA VESICLE-A...		Potri.012G119600 [exp]	19.59	0.7962
AT4G00430		PIP1;4, TMP-C, ...	TRANSMEMBRANE PROTEIN C, PLASM...		Potri.016G113300 [exp]	21.90	0.7520
AT3G59350			Protein kinase superfamily pro...		Potri.017G036300 [exp]	21.97	0.6763

Compare expression of checked genes

Potri.003G091500 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.