Plant FIBer expression Database

Potri.003G126600 [POPLAR]


External link
JGI Phytozome v13PopgenieAspWood                  
Symbol
Arabidopsis homologues
Locus ID BLAST score/e-value TF class Alias TAIR10 short description
AT1G63490 1013 / 0 transcription factor jumonji (jmjC) domain-containing protein (.1)
AT4G20400 319 / 2e-91 PKDM7B, JMJ14 JUMONJI 14 (.1.2)
AT1G08620 322 / 2e-90 PKDM7D Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein (.1), Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein (.2)
AT1G30810 310 / 3e-89 Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein (.1), Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein (.2)
AT2G34880 301 / 4e-86 PKDM7C, MEE27 maternal effect embryo arrest 27, Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein (.1)
AT2G38950 215 / 3e-58 Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein (.1)
AT5G46910 216 / 1e-57 Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein (.1)
AT5G04240 148 / 2e-35 JUMONJI ELF6 EARLY FLOWERING 6, Zinc finger (C2H2 type) family protein / transcription factor jumonji (jmj) family protein (.1)
AT3G48430 131 / 3e-30 JUMONJI JMJ12, REF6 Jumonji domain-containing protein 12, relative of early flowering 6 (.1)
AT3G01460 65 / 7e-10 MBD9, ATMBD9 methyl-CPG-binding domain 9 (.1)
Paralogs
Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description
Potri.019G018700
[exp]
336 / 1e-94 AT1G08620 1260 / 0.0 Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein (.1), Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein (.2)
Potri.013G046700
[exp]
335 / 3e-94 AT1G08620 1281 / 0.0 Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein (.1), Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein (.2)
Potri.001G440900
[exp]
328 / 6e-93 AT4G20400 733 / 0.0 JUMONJI 14 (.1.2)
Potri.011G155100
[exp]
325 / 2e-92 AT4G20400 707 / 0.0 JUMONJI 14 (.1.2)
Potri.002G037300
[exp]
245 / 2e-67 AT1G08620 669 / 0.0 Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein (.1), Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein (.2)
Potri.003G096100
[exp]
213 / 2e-56 AT5G46910 924 / 0.0 Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein (.1)
Potri.001G137700
[exp]
209 / 5e-55 AT5G46910 893 / 0.0 Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein (.1)
Potri.010G224700
[exp]
155 / 2e-37 AT5G04240 956 / 0.0 EARLY FLOWERING 6, Zinc finger (C2H2 type) family protein / transcription factor jumonji (jmj) family protein (.1)
Potri.008G037800
[exp]
154 / 2e-37 AT5G04240 997 / 0.0 EARLY FLOWERING 6, Zinc finger (C2H2 type) family protein / transcription factor jumonji (jmj) family protein (.1)
Flax homologues
Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description
Lus10008495
[exp]
1830 / 0 AT1G63490 916 / 0.0 transcription factor jumonji (jmjC) domain-containing protein (.1)
Lus10008531
[exp]
1427 / 0 AT1G63490 796 / 0.0 transcription factor jumonji (jmjC) domain-containing protein (.1)
Lus10042566
[exp]
337 / 3e-93 AT3G04490 1382 / 0.0 unknown protein
Lus10008063
[exp]
325 / 5e-93 AT1G30810 901 / 0.0 Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein (.1), Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein (.2)
Lus10022024
[exp]
336 / 1e-92 AT3G04490 1370 / 0.0 unknown protein
Lus10030988
[exp]
216 / 9e-58 AT5G46910 850 / 0.0 Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein (.1)
Lus10035385
[exp]
216 / 2e-57 AT5G46910 843 / 0.0 Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein (.1)
Lus10033903
[exp]
198 / 4e-52 AT1G08620 572 / 0.0 Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein (.1), Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein (.2)
Lus10003548
[exp]
173 / 2e-43 AT1G08620 455 / 4e-142 Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein (.1), Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein (.2)
Lus10009218
[exp]
157 / 8e-38 AT5G04240 993 / 0.0 EARLY FLOWERING 6, Zinc finger (C2H2 type) family protein / transcription factor jumonji (jmj) family protein (.1)
PFAM info
Clan ID Clan name Pfam ID Pfam name Pfam description
CL0390 zf-FYVE-PHD PF00628 PHD PHD-finger
CL0123 HTH PF01388 ARID ARID/BRIGHT DNA binding domain
CL0029 Cupin PF02373 JmjC JmjC domain, hydroxylase
CL0029 Cupin PF02375 JmjN jmjN domain
CL0029 PF02928 zf-C5HC2 C5HC2 zinc finger
CL0029 PF08429 PLU-1 PLU-1-like protein
Representative CDS sequence
>Potri.003G126600.1 pacid=42784880 polypeptide=Potri.003G126600.1.p locus=Potri.003G126600 ID=Potri.003G126600.1.v4.1 annot-version=v4.1
ATGGGGAAAGGAAAACCCAGGGCTGTAGAAAAAGGAGTTTTAGGGCAAAATTTGAGTTTATTTTCGTCGTCTTCATCGGCTTCTTCGTCATCCGGGTCAT
TGCATGTGCCATCTGCACCTGTTTATTACCCTAATGAAGAGGAATTTAAGGATCCATTAGAGTATATTTACAAAATTAGACCGGAAGCGGAGCCTTATGG
GATTTGTAAAATTGTTCCACCAAATAATTGGAAACCGCCATTTGCATTGAATTTGGAGAATTTTAGTTTTCCTACGAAGACTCAGGCTATTCATCAGTTG
CAAGTGAGGCCGGCGTCTTGTGATTCCAAGACTTTTGAGTTGGAGTATAATAGGTTCTTGGAGGAACATTGTGGGAAGAAGTTGAAAAGGAGGGTGATTT
TTGAAGGGGACGAGTTGGATTTGTGTAAATTGTTTAATGGAGTGAAGAGGTTCGGTGGCTATGATAAGGTCGTGAAGGAGAAGAAGTGGGGTGAGGTTTC
GAGGTTTGTTAGGTCCGGGAGGAAGATTACAGAGTGTGCGAAGCATGTTTTGTGTCAGTTGTATCAAGAGCATTTGTATGATTATGAGGAGTACTATAAT
CGATTGAATAAGGGGGTTGCTAGGGGTTGTAAAAGGGGAGTGCGAAAGTCTAAGAAGAGTGATGATAGGATGGAGTTTTCACGTTCAAAAAGGAGGCGGA
AGAACAGTGATGGTGAGAAAGTGAAGGTTTGTAATAAGGTAGAGGAGGAAGAAGAGCATGATCAGATATGCGAGCAATGCAGGAGTGGTTTGCATGGGGA
GGTGATGCTTTTGTGCGATAGATGTAACAAGGGGTGGCATATTTATTGTCTCTCACCGCCATTAAAGCAAGTTCCGCCAGGGAATTGGTATTGCTTTGAG
TGTTTGAATTCTGACAAGGATACTTTTGGTTTTGTCCCTGGTAAGCGCTTCACAGTGGAAGCTTTTAGGCGTCTAGCTGATCGGGCCAAGAGGAGATGGT
TTGGCTCAGGATCTACTTCTCGAGTGCAGATGGAGAAAAAGTTCTGGGAAATTGTGGAGGGATCAGCTGGTGACGTTGAAGTTATGTATGGTAGTGACTT
GGATACTTCTGTTTATGGGAGTGGCTTCCCACGTGTAAATGATCAGAGACCAGAATCAGTTGAGGCTAACTTATGGGATGAATATTGTGGCAGTCCATGG
AACCTCAATAATTTGCCCAAGTTGAAAGGTTCAATGCTCCAAGCTGTTCATCATAACATTACTGGTGTTATGGTGCCCTGGCTATATGTTGGCATGCTTT
TCTCATCTTTTTGCTGGCATTTTGAAGACCACTGTTTTTACTCAATGAATTATCTACACTGGGGAGAGCCAAAATGTTGGTACAGTGTTCCGGGTAGTGA
AGCTGGTGCTTTTGAGAAGGTGATGCGCAGTAGTCTTCCTGATCTCTTTGATGCACAACCGGATTTACTCTTCCAGCTTGTAACCATGCTGAACCCATCT
GTCTTGCAAGATAATCGGGTTCCAGTCTATACTGTACTGCAGGAGCCTGGAAACTTTGTCATCACTTTTCCCAGGTCTTACCATGGAGGTTTCAACTTTG
GTTTGAATTGTGCAGAAGCTGTGAATTTTGCTCCGGCTGACTGGCTACCTTACGGTGGATTTGGAGCAGAGCTGTATAAGAATTATCATAAGACTGCTGT
TTTATCTCACGAGGAGCTTCTTTGTGTGGTGGCTAAGGGTGATTTTGATAGCAAAGCATCGCCTCATATAAAGAAAGAAATGCTTAGGATATACACCGAA
GAGAAGTCCTGGAGGGAGAGGATTTGGAGAAGTGGCATCATCAAATCATCCCCTATGCCTCTGCGGAAATGTCCTGAATATGTTGGTACTGAGGAGGATC
CTGCATGCATTATATGCAAACAATATCTGTATCTTTCTGCAGTTGTTTGCCATTGTAGGCCATCCGCATTTGTCTGTCTGGAGCATTGGGAGCGTATCTG
TGAATGTAAATCCAGAAGACGTCGTCTTCTATATCGTCATACCCTTGCAGAATTGTCTGATTTGGTGCTCGCATCAGATAGCGATAGATTTGAGGAGAGA
TCACCAAGTAATGACTTACGAAGGCAAATCTCATGTTCCAATGAGCTGAATGTGTTAACGAAGAAGGTCAAGGGGGGGCATGTCAGCCTGGCTGAACTTG
CTGAACAATGGCTTTCGCGTGCCAAAAAGTTTTTTCAGCATCCATATTTGGGTGATGCATGTGCTACCCTGTTGAAGGAAGCTGAGCAATTTCTTTGGGC
TGGTTCTGAGATGGATCCTGTACGAGACATGGTGAAGAGCTTGAATGCAGCTCAGATGTGGGCAGGAGGCATAAGAGATTGTCTTTTTAAAGTTCAAAAC
TGGTCATCTGGTCACAGCTGTGATTTGGAGAGAGTGCCTTTGGAATACATTGCTGAGTTGCTGAATAATGATCCCGTGCCATGTAATGAGCCAGGGCATC
TCATGTTGAAGGAGCGTGCAGATGAGGCATGGCGTTTGGCTCAGGAAATTGATTCTGCTCTGTCATCATGCTCAGAAATATCTGTGCTGGAATCACTGTA
CTCGAGATTTAGTGACTTGCCAATATATATTAAAGAAAGCAAGAAGCTGTCGAAAAAACTTTCATCAGCAAAGATCTGGATAGACAGTGCAAAGAAATGC
ATATCAGAGACACAAAGCGCTGCAGTTGACATTGATATTCTCTACAAGCTGAAGTCAGAGATGTCGGAGCTTCAAATTCAACTTCCAGAAACAGAATTGC
TTTTGGATCTAGTAAGGAAAGCTGAATCATGTCAGTCTCAGTGCAAGGAAATCTTGAAAGCTCCATTTAGTTTAAAGAATGTTGAAGTGTTGCTTCAAGA
ATTCAAGAATTTTACTGTTAACATACCGGAGTTGATGCTTCTGAAGCAATGCCACATCAATGCTGTTTCATGGATTTCTCGCTGTAATGATGTTTTGGTG
AATCTTCATGAACGGGAAGATCAAGATAAAGTAGTTAATGAATTAAATTGCCTATTAAAAGATGCAGCATCTTTGAGAATTCAAGTTGATGAGTTGCCTC
TAGTTGAGTTAGAGTTGAAGAAGGCTTGTTGCAGAGTAAAAGTTCTGAAAGCTCGTGATATGAAAATGCCTTTGGACTTCATTCAGGAACTGATGATGGA
GGCTTTTGTGCTACAGATTGAAAAAGAGAAACTGTTTGTTGATTTGTCTGGAGTAATTGCAGCTGTGAGGTGTTGGGAGGAAAGAGCCACAAAACTTCTT
GCACAGGAAGCTCAAATGTTGGATTTTGAGGATATTATAAGGACTTCAGCAGATATACCTGTGCTTCTACCCTTGCTAGATGATATTAAAGATGCTGTAG
CAATGGCTAAGTCCTGGTTAGAGAATTCTGCGCCATTTTTGGTTTCTTCTAGTTCCATGGTATCTGGCTCTGTTTCTTCACTCAAACTCGAGGTCCTAAA
GGAGTTGGTTTCACACTCGAAGTTACTAAAAATATCTTTGGATGAACGAAGAATGCTTGAAATGGTTCTGAAGAACTGTGATGAATGGCAGCAGGATGCC
AACTCTGCATTGCAGGATGCTAGGTGCATTCTGAGTACAGATGATATTGATGATGGAAAGAACGGTTGTCTTTTTGGAAAAGTTGAACATTTAGCTGCTA
AAATGGAATCCATCACTAAAGCTGGTTTATCTCTGAATTTTGACTTTGCTGAGATTCCAAAACTCCAGAATGCATGTTCAATGCTGCGATGGTGCTCTAG
AGCTCTTTCTTTCTGCACCTGTGCTCCTTCTTTGGAGGATGTTGAGAGTTTGATGGAGGCTGCAGAAAACCTTTCTGTTATCGGTGTCTCTGGTACCCTA
TGGAGTGCATTAATTGATGGGGTCAAATGGCTTAGGAAAGCCTTGGGAGTAATTTCTTTGCCTGGCAATTTTGAAAGATTCAAGCTGAGTGATGCCGAAG
TAGTTCTTGCTGAATCTCAGAGTATACAAATCTCCTTTCCTTTGATGGTCAATCAACTTGTAAATGCCATTCATAAACACAAGTTGTGGCTAGAACAAGC
TGAACGATTTTTTAGTCTAAACTCTGAGGAAAGATCCTGGTCTCTAATATTAGAGCTTAAGGAACTGGGGAAGGCTTCAGCATTTTCTTGTTCAGAGCTA
GATCTGGTTCTATATGAAGTTGAAAAGGTTGAAAAGTGGAAGCAACAATTTGTGGAGATTATTGGAAGATTTGTAGATGATAGGAATTCGTTGTCTGATG
CATTGCAGAAGGTCAAGCAGTCTCTGGATATATCTCTGAACATCTATGGCAAATCATGGAGCGCTAAAGCAAGAATACTATGCATGTGCTATACTGGTTA
CAACGAAGAAATTTTTTTCTCTCTTGTTCAATGTGCAAGGACCGCTACCATTTGCGGTGCCTTGATTCAGCACAAGTCAATCCAAATAATGCTGAAGTTT
TTATTTGCCATTATTGCCAATTTTTTGATGATGGGTCAATATCCCAAAATGGAGGTGGTCCCCTGGATTGAAGAAAAGGATTTATTACAACAGATCGTGG
ACCAAGCTCATGAATGCAAAAAATGCTTGAGAGAAATATTGGATTTTGCATTATCTTATTTGGACAAGGATCTCACTGTTGTCTGTGAAAAACTAACCAT
TGCTCTGAAGGCCACGGAAGTGGCAGGTGTTTGTGATAATCAAGATAAATGTGACCTTGAACTGGCATCAGCTAGAAATTCTTGGAGAGTGAGAGTCAAG
AGACTATTGGAGGATGCACAGAAGCCTACGATGCAACATATTCAGCGGCACATGAAAGAGGGACTAGCTATGAGCATACCTCCAGAAGATTACATATGGC
AGAAACTTGCTGAACTGAAGGACATTGGCTTGCAGTGGGCAGATCACGCAAAGAAGGTTGATAACACTTTGCCAGTTGTCTTTAAATTTTGCTATTGCTC
AATAATTTGGTGCTTTCTTTTCTGTGGGCAGGTTGCAACAGATTCTGGAGCTCTTGGCCTGGATAAGGTTTTTGAACTTATTTCAGAGGGTGAAAATTTG
CCTATATACTTAGAGAAGGAACTGAAGTTATTAAGAGCTCGAAGCATGCTGTACTGCATTTGCCGAAAACCATTTGACAGTAGAGTAAAGGTAGCGTGTA
AGTTGTGTGGTGAGTGGTACCATATTGATTGTATCAAGCTACTCACCCCACCAAAGATCTACTTCTGTGCTGCATGTGAGCCTCAAACTGAAGGGTTGTC
TGTGTCACTACTGGCAGATCATGAGAGATCAACGAGTGCCAAATCTGTAGAGCCCAAAACACCTTCACCTCGGCACACAAAATCAAGAAAGAAGCCAGGT
GAAACAGAGTCCAATGTGATGCAAAAAATGCTTGCATTTGAAAACCATAGTAATGTATTTATCCATTCTAGTGGGATTGATCAATTGGGGTGGCAGAACC
GGAAGCCTCTTAGAAGGGCAGCTAAAAAGCGAACAGAGCTCAAAATCCTGTCCCAATTTTTTCATAGGTAA
AA sequence
>Potri.003G126600.1 pacid=42784880 polypeptide=Potri.003G126600.1.p locus=Potri.003G126600 ID=Potri.003G126600.1.v4.1 annot-version=v4.1
MGKGKPRAVEKGVLGQNLSLFSSSSSASSSSGSLHVPSAPVYYPNEEEFKDPLEYIYKIRPEAEPYGICKIVPPNNWKPPFALNLENFSFPTKTQAIHQL
QVRPASCDSKTFELEYNRFLEEHCGKKLKRRVIFEGDELDLCKLFNGVKRFGGYDKVVKEKKWGEVSRFVRSGRKITECAKHVLCQLYQEHLYDYEEYYN
RLNKGVARGCKRGVRKSKKSDDRMEFSRSKRRRKNSDGEKVKVCNKVEEEEEHDQICEQCRSGLHGEVMLLCDRCNKGWHIYCLSPPLKQVPPGNWYCFE
CLNSDKDTFGFVPGKRFTVEAFRRLADRAKRRWFGSGSTSRVQMEKKFWEIVEGSAGDVEVMYGSDLDTSVYGSGFPRVNDQRPESVEANLWDEYCGSPW
NLNNLPKLKGSMLQAVHHNITGVMVPWLYVGMLFSSFCWHFEDHCFYSMNYLHWGEPKCWYSVPGSEAGAFEKVMRSSLPDLFDAQPDLLFQLVTMLNPS
VLQDNRVPVYTVLQEPGNFVITFPRSYHGGFNFGLNCAEAVNFAPADWLPYGGFGAELYKNYHKTAVLSHEELLCVVAKGDFDSKASPHIKKEMLRIYTE
EKSWRERIWRSGIIKSSPMPLRKCPEYVGTEEDPACIICKQYLYLSAVVCHCRPSAFVCLEHWERICECKSRRRRLLYRHTLAELSDLVLASDSDRFEER
SPSNDLRRQISCSNELNVLTKKVKGGHVSLAELAEQWLSRAKKFFQHPYLGDACATLLKEAEQFLWAGSEMDPVRDMVKSLNAAQMWAGGIRDCLFKVQN
WSSGHSCDLERVPLEYIAELLNNDPVPCNEPGHLMLKERADEAWRLAQEIDSALSSCSEISVLESLYSRFSDLPIYIKESKKLSKKLSSAKIWIDSAKKC
ISETQSAAVDIDILYKLKSEMSELQIQLPETELLLDLVRKAESCQSQCKEILKAPFSLKNVEVLLQEFKNFTVNIPELMLLKQCHINAVSWISRCNDVLV
NLHEREDQDKVVNELNCLLKDAASLRIQVDELPLVELELKKACCRVKVLKARDMKMPLDFIQELMMEAFVLQIEKEKLFVDLSGVIAAVRCWEERATKLL
AQEAQMLDFEDIIRTSADIPVLLPLLDDIKDAVAMAKSWLENSAPFLVSSSSMVSGSVSSLKLEVLKELVSHSKLLKISLDERRMLEMVLKNCDEWQQDA
NSALQDARCILSTDDIDDGKNGCLFGKVEHLAAKMESITKAGLSLNFDFAEIPKLQNACSMLRWCSRALSFCTCAPSLEDVESLMEAAENLSVIGVSGTL
WSALIDGVKWLRKALGVISLPGNFERFKLSDAEVVLAESQSIQISFPLMVNQLVNAIHKHKLWLEQAERFFSLNSEERSWSLILELKELGKASAFSCSEL
DLVLYEVEKVEKWKQQFVEIIGRFVDDRNSLSDALQKVKQSLDISLNIYGKSWSAKARILCMCYTGYNEEIFFSLVQCARTATICGALIQHKSIQIMLKF
LFAIIANFLMMGQYPKMEVVPWIEEKDLLQQIVDQAHECKKCLREILDFALSYLDKDLTVVCEKLTIALKATEVAGVCDNQDKCDLELASARNSWRVRVK
RLLEDAQKPTMQHIQRHMKEGLAMSIPPEDYIWQKLAELKDIGLQWADHAKKVDNTLPVVFKFCYCSIIWCFLFCGQVATDSGALGLDKVFELISEGENL
PIYLEKELKLLRARSMLYCICRKPFDSRVKVACKLCGEWYHIDCIKLLTPPKIYFCAACEPQTEGLSVSLLADHERSTSAKSVEPKTPSPRHTKSRKKPG
ETESNVMQKMLAFENHSNVFIHSSGIDQLGWQNRKPLRRAAKKRTELKILSQFFHR

DESeq2's median of ratios [POPLAR]

Mapped by: Order by: Show schematic diagram

Coexpressed genes

Only top 10 genes are shown Show allDownload tab-delimited text
Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.
At best At TF class At alias At description Locus MR r Symbol NWA:WTNWB:WTNWA:OE-ARK2NWB:OE-ARK2NWA:miRNA-ARK2NWB:miRNA-ARK2NW 0hrWT H20WT-NWTUA1dEY NWTUA1dEY+TUB15 NWTUA1dY+TUB9 NWPde NWNWA:WT GANWBWT GATW:WTTW:WT GANWA:OE-ARK2 GANWB:OE-ARK2 GATW:OE-ARK2TW:OE-ARK2 GANWA:miRNA-ARK2 GANWB:miRNA-ARK2 GATW:miRNA-ARK2TW:miRNA-ARK2 GATW 2hrTW 8hrTW 24hrTW 48hrTW 96hrTW 336hrWT ACC35S::etr1-1 H2035S::etr1-1 ACCLMX5::etr1-1 H20LMX5::etr1-1 ACCWT-TWTUA1dEY TWTUA1dEY+TUB15 TWTUA1dY+TUB9 TWPde TWOW:WTOW:WT GAOW:OE-ARK2OW:OE-ARK2 GAOW:miRNA-ARK2OW:miRNA-ARK2 GAOW 2hrOW 8hrOW 24hrOW 48hrOW 96hrOW 336hrRoot CTRRoot LongColdRoot LongDrougtRoot LongHeatRoot LongSaltRoot ShortColdRoot ShortDrougtRoot ShortHeatRoot ShortSaltPtr rootLeaf CTRLeaf LongColdLeaf LongDrougtLeaf LongHeatLeaf LongSaltLeaf ShortColdLeaf ShortDrougtLeaf ShortHeatLeaf ShortSaltPtr leafStem CTRStem LongColdStem LongDrougtStem LongHeatStem LongSaltStem ShortColdStem ShortDrougtStem ShortHeatStem ShortSaltPtr shootPtr xylemPtr phloemPtr fiberPtr vesselPtr fiber vessel ray
AT1G63490 transcription factor jumonji (... Potri.003G126600
[exp]
0 1
AT5G53430 SET29, ATX5, SD... SET domain group 29 (.1) Potri.012G013900
[exp]
2.44 0.8361 SDG914
AT2G13370 CHR5 chromatin remodeling 5 (.1) Potri.001G253400
[exp]
3.87 0.8604
AT1G24190 SNL3, AtSin3 ARABIDOPSIS THALIANA SIN3 HOMO... Potri.008G192200
[exp]
4.47 0.8321 SNT901
AT1G65440 GTB1 global transcription factor gr... Potri.016G029200
[exp]
7.07 0.8376
AT1G33360 ATP-dependent Clp protease (.1... Potri.013G089500
[exp]
7.07 0.7471
AT1G70060 SNL4 SIN3-like 4 (.1) Potri.010G038700
[exp]
8.06 0.8061
AT2G25730 unknown protein Potri.006G244900
[exp]
10.00 0.8338
AT5G61140 U5 small nuclear ribonucleopro... Potri.015G056501
[exp]
11.66 0.7967
AT5G22320 Leucine-rich repeat (LRR) fami... Potri.004G199200
[exp]
12.00 0.7643
AT1G60200 splicing factor PWI domain-con... Potri.010G094700
[exp]
12.24 0.8125

Potri.003G126600 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.