Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol	Pt-CYP86.7
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G63710 822 / 0 CYP86A7 "cytochrome P450, family 86, subfamily A, polypeptide 7", cytochrome P450, family 86, subfamily A, polypeptide 7 (.1) AT2G45970 801 / 0 CYP86A8, LCR LACERATA, "cytochrome P450, family 86, subfamily A, polypeptide 8", cytochrome P450, family 86, subfamily A, polypeptide 8 (.1) AT1G01600 794 / 0 CYP86A4 "cytochrome P450, family 86, subfamily A, polypeptide 4", cytochrome P450, family 86, subfamily A, polypeptide 4 (.1) AT4G00360 789 / 0 ATT1, CYP86A2 "cytochrome P450, family 86, subfamily A, polypeptide 2", ABERRANT INDUCTION OF TYPE THREE 1, cytochrome P450, family 86, subfamily A, polypeptide 2 (.1) AT5G58860 681 / 0 CYP86A1 "cytochrome P450, family 86, subfamily A, polypeptide 1", cytochrome P450, family 86, subfamily A, polypeptide 1 (.1) AT5G23190 476 / 3e-163 CYP86B1 "cytochrome P450, family 86, subfamily B, polypeptide 1", cytochrome P450, family 86, subfamily B, polypeptide 1 (.1) AT5G08250 461 / 1e-158 Cytochrome P450 superfamily protein (.1) AT1G13150 386 / 1e-128 CYP86C4 "cytochrome P450, family 86, subfamily C, polypeptide 4", cytochrome P450, family 86, subfamily C, polypeptide 4 (.1) AT1G13140 384 / 9e-128 CYP86C3 "cytochrome P450, family 86, subfamily C, polypeptide 3", cytochrome P450, family 86, subfamily C, polypeptide 3 (.1.2) AT1G24540 379 / 6e-126 CYP86C1 "cytochrome P450, family 86, subfamily C, polypeptide 1", cytochrome P450, family 86, subfamily C, polypeptide 1 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.014G085800 [exp] 848 / 0 AT2G45970 866 / 0.0 LACERATA, "cytochrome P450, family 86, subfamily A, polypeptide 8", cytochrome P450, family 86, subfamily A, polypeptide 8 (.1) Potri.009G043700 [exp] 689 / 0 AT5G58860 827 / 0.0 "cytochrome P450, family 86, subfamily A, polypeptide 1", cytochrome P450, family 86, subfamily A, polypeptide 1 (.1) Potri.001G249700 [exp] 682 / 0 AT5G58860 790 / 0.0 "cytochrome P450, family 86, subfamily A, polypeptide 1", cytochrome P450, family 86, subfamily A, polypeptide 1 (.1) Potri.007G072100 [exp] 459 / 6e-157 AT5G23190 799 / 0.0 "cytochrome P450, family 86, subfamily B, polypeptide 1", cytochrome P450, family 86, subfamily B, polypeptide 1 (.1) Potri.005G092200 [exp] 447 / 8e-152 AT5G23190 788 / 0.0 "cytochrome P450, family 86, subfamily B, polypeptide 1", cytochrome P450, family 86, subfamily B, polypeptide 1 (.1) Potri.008G183300 [exp] 402 / 6e-135 AT1G24540 682 / 0.0 "cytochrome P450, family 86, subfamily C, polypeptide 1", cytochrome P450, family 86, subfamily C, polypeptide 1 (.1) Potri.010G050100 [exp] 397 / 7e-133 AT1G24540 684 / 0.0 "cytochrome P450, family 86, subfamily C, polypeptide 1", cytochrome P450, family 86, subfamily C, polypeptide 1 (.1) Potri.006G033600 [exp] 367 / 9e-122 AT3G56630 576 / 0.0 "cytochrome P450, family 94, subfamily D, polypeptide 2", cytochrome P450, family 94, subfamily D, polypeptide 2 (.1) Potri.016G031700 [exp] 363 / 4e-120 AT3G56630 629 / 0.0 "cytochrome P450, family 94, subfamily D, polypeptide 2", cytochrome P450, family 94, subfamily D, polypeptide 2 (.1)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10032278 [exp] 858 / 0 AT1G63710 792 / 0.0 "cytochrome P450, family 86, subfamily A, polypeptide 7", cytochrome P450, family 86, subfamily A, polypeptide 7 (.1) Lus10014768 [exp] 728 / 0 AT4G00360 756 / 0.0 "cytochrome P450, family 86, subfamily A, polypeptide 2", ABERRANT INDUCTION OF TYPE THREE 1, cytochrome P450, family 86, subfamily A, polypeptide 2 (.1) Lus10040687 [exp] 677 / 0 AT5G58860 803 / 0.0 "cytochrome P450, family 86, subfamily A, polypeptide 1", cytochrome P450, family 86, subfamily A, polypeptide 1 (.1) Lus10018217 [exp] 677 / 0 AT5G58860 802 / 0.0 "cytochrome P450, family 86, subfamily A, polypeptide 1", cytochrome P450, family 86, subfamily A, polypeptide 1 (.1) Lus10024644 [exp] 622 / 0 AT1G63710 562 / 0.0 "cytochrome P450, family 86, subfamily A, polypeptide 7", cytochrome P450, family 86, subfamily A, polypeptide 7 (.1) Lus10017789 [exp] 422 / 3e-146 AT2G45970 465 / 1e-163 LACERATA, "cytochrome P450, family 86, subfamily A, polypeptide 8", cytochrome P450, family 86, subfamily A, polypeptide 8 (.1) Lus10017394 [exp] 431 / 2e-145 AT5G23190 739 / 0.0 "cytochrome P450, family 86, subfamily B, polypeptide 1", cytochrome P450, family 86, subfamily B, polypeptide 1 (.1) Lus10018830 [exp] 419 / 3e-145 AT2G45970 465 / 8e-164 LACERATA, "cytochrome P450, family 86, subfamily A, polypeptide 8", cytochrome P450, family 86, subfamily A, polypeptide 8 (.1) Lus10010193 [exp] 428 / 1e-144 AT5G23190 741 / 0.0 "cytochrome P450, family 86, subfamily B, polypeptide 1", cytochrome P450, family 86, subfamily B, polypeptide 1 (.1) Lus10040986 [exp] 422 / 3e-142 AT5G23190 751 / 0.0 "cytochrome P450, family 86, subfamily B, polypeptide 1", cytochrome P450, family 86, subfamily B, polypeptide 1 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF00067 [poplar] [flax] p450 Cytochrome P450
Representative CDS sequence Show only first row Show all	>Potri.003G129100.1 pacid=42787091 polypeptide=Potri.003G129100.1.p locus=Potri.003G129100 ID=Potri.003G129100.1.v4.1 annot-version=v4.1 ATGTTCAAGTTGTTTGAGTCTTGGGGCATGGATATATCGACGGCTTCGATGATTCTAACAGCAGTGGTTACTTACTTGATTTGGTTGAGTTTCATCTCGC GGTCAATGAAGGGTCCACGTGTATGGCCTCTATTCGGCAGCCTTCCTGGTCTCATTTGGCACTCTAGTCGCATGCATGATTGGATCGCAGACAACCTCCG CAAGTGTGGCGGCACGTACCAGACATGCGTAGTTGCAATTCCCTTATTAGCCCGGAGGCAAAGCCTCGTGACTGTCACGTGCGACCCCAAGAACCTAGAG CATATCTTGAAAGCCAGGTTTGATAATTACCCAAAAGGACCCAATTGGCAGTCTGTGTTCCATGATTTGCTTGGTGATGGCATCTTCAACTCAGATGGTG AAACGTGGTTGTTCCAGCGCAAGACGGCAGCACTTGAATTTACCACCCGGACACTACGCCAAGCCATGGCTAGGTGGGTGAGCCGAGCCATCAAGCACCG CTTTTGCCCTATACTTGAGTCGGCTCAACAACAGGCCAAGCCGGTCGATCTTCAAGACATGCTACTTAGGCTCACTTTTGATAACATTTGTGGATTGGCT TTTGGCAAGGATCCACAAACATTGTCACTGGAATTTCCTGAGAATGGCTTTGCAGTGTCTTTCGACACAGCCACGGAAGCTACATTGCAGCGCTTCATTT TGCCAGAAATAGTGTGGAAGTTGAGGAAAAGTCTTCGGCTTGGTATGGAAATGAGCTTGAGCCAAAGCATTGACCACATAGACGCATACTTGTCTGACAT CATCAATACACGAAAGCTCGAATTGGTTAATCAGCAGAAAGGTGGCAATGAGAACCCACATGACGACTTGTTGTCTAGGTTTATGAAGAAGAAGGAATCC TACTCGGACAAATTTCTTCAACACGTGGCATTAAATTTTATCCTAGCTGGACGTGACACGTCATCAACGGCGCTGAGCTGGTTCTTCTGGCTTGTGAGTC AGAATCCAAAAGTGGAAGAGAAAATCCTCATTGAAATTTGCACCGTTTTGATGGAGACACGTGGCAATGATACGCGCAAGTGGTTGGAGGAGCCATTAGT GTTTGAAGAAGTTGACCGACTGACCTACCTCAAGGCAGCATTATCTGAGACCTTAAGGCTCTACCCTTCTGTGCCACAAGACTCAAAGCATGTAGTTGCC GATGATGTTTTGCCCAGTGGAGCTTTTGTTCCGGCAGGATCATCCATAACCTACTCAATATATGCAGTTGGTCGGATGGAATTTATCTGGGGTGATGATT GCCTAGAATTCAAGCCGGAAAGATGGTTATCCTTGGATGGCAAGAAAATCGAGGTGCCGGATTCTTACAGGTTTCTCGCGTTTAATGCAGGTCCAAGGAT TTGTTTAGGCAAGGATTTGGCTTATTTGCAAATGAAGTCAATCGCGGCAGCTTTGTTGTTGCGCCACCGGATCTCAGTGGTGCCGGGCCACCGTGTTGAG CAAAAAATGTCACTGACATTGTTTATGAAGTATGGTCTGATGGTTAACGTGCACCCAAGGGACCTGAGGCCTATAGTGGAAAAGGTATGCAAAAATGCTC TTACAAATAGCAATCATGCTTGTGGGATTGAATCGACCACTCCTGTTTCTTAA
AA sequence Show only first row Show all	>Potri.003G129100.1 pacid=42787091 polypeptide=Potri.003G129100.1.p locus=Potri.003G129100 ID=Potri.003G129100.1.v4.1 annot-version=v4.1 MFKLFESWGMDISTASMILTAVVTYLIWLSFISRSMKGPRVWPLFGSLPGLIWHSSRMHDWIADNLRKCGGTYQTCVVAIPLLARRQSLVTVTCDPKNLE HILKARFDNYPKGPNWQSVFHDLLGDGIFNSDGETWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILESAQQQAKPVDLQDMLLRLTFDNICGLA FGKDPQTLSLEFPENGFAVSFDTATEATLQRFILPEIVWKLRKSLRLGMEMSLSQSIDHIDAYLSDIINTRKLELVNQQKGGNENPHDDLLSRFMKKKES YSDKFLQHVALNFILAGRDTSSTALSWFFWLVSQNPKVEEKILIEICTVLMETRGNDTRKWLEEPLVFEEVDRLTYLKAALSETLRLYPSVPQDSKHVVA DDVLPSGAFVPAGSSITYSIYAVGRMEFIWGDDCLEFKPERWLSLDGKKIEVPDSYRFLAFNAGPRICLGKDLAYLQMKSIAAALLLRHRISVVPGHRVE QKMSLTLFMKYGLMVNVHPRDLRPIVEKVCKNALTNSNHACGIESTTPVS

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT1G63710		CYP86A7	"cytochrome P450, family 86, s...		Potri.003G129100 [exp]	0	1	Pt-CYP86.7
					Potri.011G006500 [exp]	1.00	0.9992
AT4G33800			unknown protein		Potri.002G117600 [exp]	4.00	0.9950
AT2G04570			GDSL-like Lipase/Acylhydrolase...		Potri.014G160100 [exp]	6.48	0.9934
AT1G35180			TRAM, LAG1 and CLN8 (TLC) lipi...		Potri.005G231600 [exp]	6.85	0.9656
AT4G24350			Phosphorylase superfamily prot...		Potri.013G080300 [exp]	7.00	0.9929
AT1G69530		ATHEXPALPHA1.2,...	EXPANSIN 1, expansin A1 (.1.2....		Potri.004G123200 [exp]	7.07	0.9936	Pt-EXP2.4
AT2G18360			alpha/beta-Hydrolases superfam...		Potri.009G117000 [exp]	9.48	0.9917
AT5G54010			UDP-Glycosyltransferase superf...		Potri.006G179700 [exp]	10.48	0.9908
AT1G14430			glyoxal oxidase-related protei...		Potri.001G083600 [exp]	12.48	0.9901
AT1G29450			SAUR-like auxin-responsive pro...		Potri.004G181500 [exp]	13.96	0.9888

Compare expression of checked genes

Potri.003G129100 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.