Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol	CYP51G5,CYP51.1
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G11680 828 / 0 EMB1738, CYP51A2, CYP51G1 embryo defective 1738, CYTOCHROME P450 51A2, CYTOCHROME P450 51G1 (.1) AT3G19270 126 / 2e-31 CYP707A4 "cytochrome P450, family 707, subfamily A, polypeptide 4", cytochrome P450, family 707, subfamily A, polypeptide 4 (.1) AT5G45340 119 / 7e-29 CYP707A3 "cytochrome P450, family 707, subfamily A, polypeptide 3", cytochrome P450, family 707, subfamily A, polypeptide 3 (.1.2) AT4G19230 119 / 1e-28 CYP707A1 "cytochrome P450, family 707, subfamily A, polypeptide 1", cytochrome P450, family 707, subfamily A, polypeptide 1 (.1.2) AT3G61040 112 / 1e-26 CYP76C7 "cytochrome P450, family 76, subfamily C, polypeptide 7", cytochrome P450, family 76, subfamily C, polypeptide 7 (.1.2) AT2G32440 112 / 2e-26 ATKAO2, CYP88A4, KAO2 ARABIDOPSIS ENT-KAURENOIC ACID HYDROXYLASE 2, ent-kaurenoic acid hydroxylase 2 (.1.2) AT2G29090 111 / 3e-26 CYP707A2 "cytochrome P450, family 707, subfamily A, polypeptide 2", cytochrome P450, family 707, subfamily A, polypeptide 2 (.1.2) AT1G55940 103 / 3e-23 CYP708A1 "cytochrome P450, family 708, subfamily A, polypeptide 1", cytochrome P450, family 708, subfamily A, polypeptide 1 (.1) AT1G05160 102 / 5e-23 ATKAO1, CYP88A3 ENT-KAURENOIC ACID OXYDASE 1, "cytochrome P450, family 88, subfamily A, polypeptide 3", cytochrome P450, family 88, subfamily A, polypeptide 3 (.1) AT1G11600 101 / 1e-22 CYP77B1 "cytochrome P450, family 77, subfamily B, polypeptide 1", cytochrome P450, family 77, subfamily B, polypeptide 1 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.001G068400 [exp] 932 / 0 AT1G11680 864 / 0.0 embryo defective 1738, CYTOCHROME P450 51A2, CYTOCHROME P450 51G1 (.1) Potri.014G029100 [exp] 141 / 7e-37 AT3G19270 665 / 0.0 "cytochrome P450, family 707, subfamily A, polypeptide 4", cytochrome P450, family 707, subfamily A, polypeptide 4 (.1) Potri.002G126100 [exp] 137 / 2e-35 AT3G19270 666 / 0.0 "cytochrome P450, family 707, subfamily A, polypeptide 4", cytochrome P450, family 707, subfamily A, polypeptide 4 (.1) Potri.004G140900 [exp] 124 / 7e-31 AT3G19270 731 / 0.0 "cytochrome P450, family 707, subfamily A, polypeptide 4", cytochrome P450, family 707, subfamily A, polypeptide 4 (.1) Potri.009G101700 [exp] 122 / 5e-30 AT3G19270 711 / 0.0 "cytochrome P450, family 707, subfamily A, polypeptide 4", cytochrome P450, family 707, subfamily A, polypeptide 4 (.1) Potri.012G115000 [exp] 120 / 4e-29 AT5G36110 295 / 7e-95 "cytochrome P450, family 716, subfamily A, polypeptide 1", cytochrome P450, family 716, subfamily A, polypeptide 1 (.1) Potri.004G235400 [exp] 119 / 4e-29 AT4G19230 778 / 0.0 "cytochrome P450, family 707, subfamily A, polypeptide 1", cytochrome P450, family 707, subfamily A, polypeptide 1 (.1.2) Potri.013G161800 [exp] 113 / 8e-27 AT1G05160 694 / 0.0 ENT-KAURENOIC ACID OXYDASE 1, "cytochrome P450, family 88, subfamily A, polypeptide 3", cytochrome P450, family 88, subfamily A, polypeptide 3 (.1) Potri.014G179100 [exp] 112 / 1e-26 AT1G05160 741 / 0.0 ENT-KAURENOIC ACID OXYDASE 1, "cytochrome P450, family 88, subfamily A, polypeptide 3", cytochrome P450, family 88, subfamily A, polypeptide 3 (.1)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10001713 [exp] 831 / 0 AT1G11680 852 / 0.0 embryo defective 1738, CYTOCHROME P450 51A2, CYTOCHROME P450 51G1 (.1) Lus10004146 [exp] 827 / 0 AT1G11680 850 / 0.0 embryo defective 1738, CYTOCHROME P450 51A2, CYTOCHROME P450 51G1 (.1) Lus10021725 [exp] 131 / 2e-33 AT3G19270 633 / 0.0 "cytochrome P450, family 707, subfamily A, polypeptide 4", cytochrome P450, family 707, subfamily A, polypeptide 4 (.1) Lus10042652 [exp] 130 / 8e-33 AT3G19270 647 / 0.0 "cytochrome P450, family 707, subfamily A, polypeptide 4", cytochrome P450, family 707, subfamily A, polypeptide 4 (.1) Lus10008423 [exp] 122 / 1e-29 AT5G24910 462 / 9e-159 EUI-like p450 A1, cytochrome P450, family 714, subfamily A, polypeptide 1 (.1) Lus10035685 [exp] 114 / 2e-27 AT4G19230 714 / 0.0 "cytochrome P450, family 707, subfamily A, polypeptide 1", cytochrome P450, family 707, subfamily A, polypeptide 1 (.1.2) Lus10012675 [exp] 112 / 1e-26 AT3G19270 586 / 0.0 "cytochrome P450, family 707, subfamily A, polypeptide 4", cytochrome P450, family 707, subfamily A, polypeptide 4 (.1) Lus10033308 [exp] 111 / 5e-26 AT5G45340 732 / 0.0 "cytochrome P450, family 707, subfamily A, polypeptide 3", cytochrome P450, family 707, subfamily A, polypeptide 3 (.1.2) Lus10034768 [exp] 109 / 2e-25 AT5G45340 731 / 0.0 "cytochrome P450, family 707, subfamily A, polypeptide 3", cytochrome P450, family 707, subfamily A, polypeptide 3 (.1.2) Lus10024577 [exp] 109 / 2e-25 AT4G12300 444 / 3e-152 "cytochrome P450, family 706, subfamily A, polypeptide 4", cytochrome P450, family 706, subfamily A, polypeptide 4 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF00067 [poplar] [flax] p450 Cytochrome P450
Representative CDS sequence Show only first row Show all	>Potri.003G161700.1 pacid=42787130 polypeptide=Potri.003G161700.1.p locus=Potri.003G161700 ID=Potri.003G161700.1.v4.1 annot-version=v4.1 ATGACTAAAGATACGGATAACAAGTTCTTGAACGTGGGTCTGCTCATTTTGGCCACTCTACTAGTGGCCAAGCTTATCTCTGCACTTATAATGCCTAGAT CTCAAAAGCGGTTGCCTCCGGTTATGAAGGGTTGGCCTTTGATAGGAGGGCTCATTCGATTCCTTAAAGGACCCATCGTTATGCTTCGTGAAGAGTACCC AAAACTTGGCAGTGTTTTTACAGTGAACCTAGCTAACTGGAAGATTACTTTCTTGATTGGCCCTGAGGTGTCTGCTCACTTCTTCAAGGCCTCCGAAGCA GATTTGAGCCAGCAGGAGGTGTATCAGTTCAATGTGCCTACTTTTGGTCCTGGTGTTGTGTTTGATGTGGATTACTCTATAAGGCAAGAGCAATTTCGAT TCTTTACAGAGTCTTTAAGAGTGAGCAAACTCAAGGGATACGTGGATCAGATGGTGGTAGAAGCAGAGGACTACTTCTCAAAATGGGGAGACAGTGGGGT GGTAGACATAAAGTATGAGCTTGAGCATCTGATCATTTTGACAGCCAGTAGATGTCTACTTGGACGAGAAGTTCGTGATAAGCTTTTTGATGATGTGTCT GCTCTATTCCATGACCTTGACAATGGAATGCTCCCAATCAGTGTTTTATTCCCATACTTGCCCATCCCAGCTCATCGCCGCCGTGATCGGGCACGCAAGA AGCTTGCAGAAATCTTTGCAAATATCATAAATTCCCGTAAGCTTGCTGGAAAATCAGAGAATGACATGTTGCAGTGCTTCATTGACTCGAAGTATAAAGA TGGTCGCCCAACAACCGAGTCTGAGATCACAGGCTTGCTCATTGCTGCTCTCTTTGCTGGGCAGCACACCAGTTCCATCACCTCCACTTGGACAGGAGCC TATCTTCTGCGACATAATGAATACCTATCTGCTGTGTTGGAGGAGCAGAAGAACTTGATGAAAAAGCACGGGAACAAAGTTGATCAAGATATTTTATCCG AGATGGGTGTCTTGCATCGGTGCATCAAGGAGGCCCTCAGACTCCATCCTCCACTAATTATGCTTTTACGGAGCTCACATAGTGACTTTAGCGTGACAAC ACGAGATGGGAAAGAATATGACATCCCAAAGGGCCACATAGTCGCGACATCTCCAGCATTTGCTAACCGTCTTCCTCATGTCTTCAAGGACCCAGAAAGG TATGATCCTGACAGATTTGCTGCTGGGAGAGAAGAAGACAAAGCGGCAGGGGCATTTTCATATATTTCTTTTGGAGGTGGCAGGCATGGGTGCCTTGGCG AACCATTTGCTTACTTGCAGATAAAGGCTATATGGAGTCATTTGCTGAGGAATTTTGAATTTGAGCTCATATCTCCTTTCCCTGAGACAGACTGGAATGC AATGGTCGTTGGTGTGAAGGACAAGGTGATGGTGCGCTACAAGCGGCGTGAGCTTTCAGTTAATTAG
AA sequence Show only first row Show all	>Potri.003G161700.1 pacid=42787130 polypeptide=Potri.003G161700.1.p locus=Potri.003G161700 ID=Potri.003G161700.1.v4.1 annot-version=v4.1 MTKDTDNKFLNVGLLILATLLVAKLISALIMPRSQKRLPPVMKGWPLIGGLIRFLKGPIVMLREEYPKLGSVFTVNLANWKITFLIGPEVSAHFFKASEA DLSQQEVYQFNVPTFGPGVVFDVDYSIRQEQFRFFTESLRVSKLKGYVDQMVVEAEDYFSKWGDSGVVDIKYELEHLIILTASRCLLGREVRDKLFDDVS ALFHDLDNGMLPISVLFPYLPIPAHRRRDRARKKLAEIFANIINSRKLAGKSENDMLQCFIDSKYKDGRPTTESEITGLLIAALFAGQHTSSITSTWTGA YLLRHNEYLSAVLEEQKNLMKKHGNKVDQDILSEMGVLHRCIKEALRLHPPLIMLLRSSHSDFSVTTRDGKEYDIPKGHIVATSPAFANRLPHVFKDPER YDPDRFAAGREEDKAAGAFSYISFGGGRHGCLGEPFAYLQIKAIWSHLLRNFEFELISPFPETDWNAMVVGVKDKVMVRYKRRELSVN

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT1G11680		EMB1738, CYP51A...	embryo defective 1738, CYTOCHR...		Potri.003G161700 [exp]	0	1	CYP51G5,CYP51.1
AT1G32860			Glycosyl hydrolase superfamily...		Potri.011G152400 [exp]	1.73	0.9222
AT5G55230		ATMAP65-1	microtubule-associated protein...		Potri.011G092500 [exp]	1.73	0.9282
AT1G13250		GATL3	galacturonosyltransferase-like...		Potri.010G129400 [exp]	3.00	0.8964
AT4G23740			Leucine-rich repeat protein ki...		Potri.003G136100 [exp]	3.16	0.9261
AT3G62060			Pectinacetylesterase family pr...		Potri.014G110900 [exp]	4.89	0.9153
AT2G36830		TIP1;1, GAMMA-T...	TONOPLAST INTRINSIC PROTEIN 1;...		Potri.006G121700 [exp]	5.00	0.9128	Pt-TIP2.7
AT5G03220			Mediator complex, subunit Med7...		Potri.016G062800 [exp]	5.38	0.8797
AT5G03040		IQD2	IQ-domain 2 (.1.2.3)		Potri.006G131100 [exp]	5.65	0.8987
AT1G01225			NC domain-containing protein-r...		Potri.014G101300 [exp]	6.00	0.9052
AT3G13410			unknown protein		Potri.012G124888 [exp]	7.41	0.8946

Compare expression of checked genes

Potri.003G161700 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.