Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol	ASY1.1
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G67370 746 / 0 ASY1, ATASY1 ASYNAPTIC 1, DNA-binding HORMA family protein (.1) AT4G32200 245 / 2e-69 ASY2 DNA-binding HORMA family protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.001G055201 [exp] 929 / 0 AT1G67370 700 / 0.0 ASYNAPTIC 1, DNA-binding HORMA family protein (.1)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10030933 [exp] 706 / 0 AT1G67370 655 / 0.0 ASYNAPTIC 1, DNA-binding HORMA family protein (.1) Lus10037019 [exp] 684 / 0 AT1G67370 621 / 0.0 ASYNAPTIC 1, DNA-binding HORMA family protein (.1) Lus10015786 [exp] 674 / 0 AT1G67370 600 / 0.0 ASYNAPTIC 1, DNA-binding HORMA family protein (.1) Lus10040113 [exp] 671 / 0 AT1G67370 626 / 0.0 ASYNAPTIC 1, DNA-binding HORMA family protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0651 [poplar] [flax] Mad2 PF02301 [poplar] [flax] HORMA HORMA domain
Representative CDS sequence Show only first row Show all	>Potri.003G173200.1 pacid=42784903 polypeptide=Potri.003G173200.1.p locus=Potri.003G173200 ID=Potri.003G173200.1.v4.1 annot-version=v4.1 ATGGTTGTTGCACAGAAAGTGAAAGAAGCGCAGATCACCGAGCAAGATTCTCTTCTTCTGACAAGGAACCTGCTTCGTATTGCTATATTCAATATCAGTT ACATTAGAGGCTTGTTTCCAGAGAAGTATTTCAATGATAAGTCTGTCCCTGCTTTAGAGATGAAGATTAAGAAGTTGATGCCCATGGATGCTGAGTCTCG TAGACTGATTGATTGGATGGAGAAAGGTGTCTATGATGCATTACAGAAAAAATACCTAAAGACACTTCTATTCTGTGTGTGCGAGACTATAGAGGGCCCG ATGATCGAGGAGTACACATTTTCCTTCAGTTATTCTGATTCTGAGAGTCAAGAGGTTTCAATGAATATCAATCGCACTGGAAACAAGAAACAAGGAGGAA CATTCAAGTATAACTCCAAAAATGAAATTACTCCCAATCAGATGAGAAGTTCTGCTTGTAAAATGGTCCGAACACTGGTTCAGTTGATGAGAACTCTGGA TAAGATGCCTGAAGAGCGGGCTATATTGATGAAGCTCGTCTACTATGATGATGTGACGCCAGCAGATTATGAGCCTCCATTCTTCAGGGGCTGCACAGAA GAAGAAGCCCATAATGCATGGACTAAGCATCCTTTGCAAATGGAGGTTGGCAATGTCAACAGCAAGCATTTTGTATTAGCACTCAAGGTGAAGAGTGTGC TTGATCCATGCGAGGATGAAAATGATGATATGGAGGATGATGAAGTGAGCTTAGGTGCTGATTCTGTAGAAAGGGATGGTTATTCTGAATCTGGCACTGA GGTTAACCAATCACAAGAAGACCAATACATAGTTGCACCAGTAGACAAGCAACGTCCAGAGGAAGACAGTGGCCTGGTTGATGAAGATGATACACAGGAC CAAGTGGAAGATGAGCAACAATTGGCCAGGGTGAAAGACTGGATTATAAGCCACCATCTTGATACCATTGAACTTACTGACGTTCTCTCTAATTTTCCAG ATATCTCAGTGGTTTTGATTGAAGAAATTATGGGCAAACTCATTGAGGAAGGTGTTTTATCGAAAATTGGAACAGATACTTACAGCAAAATCAAGCAGAA GGCCTTCGAGTATGAGTTCACTGCGGTGAAAGAGGAAATTGATGGAGACAAAGCTCCTCAGGCTGAAGATCGCATGTACATGAAGGCTTTGTATCATGTG CTTCCAATGGAATATGTGACAATTTCAAAGCTACAGAACAAGCTAGCCGGAGAAGCCAATCAGAGTACTGCGCGCAAGTTACTTGAAAAAATGATCCGAG ACGGGTATGTTGAAGCCAAAGGAAACCGAGGGCTAGGCAAGCGTGTCATTCATTCCAGCCTAACTGAAACGAAGCTTATGGAAGTCAGGAGAGCCTTGGG CAATGATGCTATGGACATTGATACTAATCAACCATATAAAAAATCCAACCATCCAGAATCCCAGAAAATGGGGAATGACTACAAGGATGGCTCAACATGT GGTGTTCTCCACTCCATCGGTTCAGATCTTACACGCATGGTGATCAGATCAGAAATGAATCAGAATGGATCAGCTAGGTGCGATCAGACTATCTCAAAGA CAAGGGACCATGGAAACACTCCTACAAGCAGGGCTGAGCCTGTTGCTTCAAGAGAGAGTTTTTTTCCAGGAAAGGAGAATGTCAGAGCAAATGGAAACAC AAATTACCTTGACGAGGCAGATACAGTTATCTGCAGCAGATCCTCTCAAGATAAGCGGTCCAGAAAGACGAGCACGGTCAAGGAGCCTATTGTTCAGTGC ACGAAGCGCCAGAAATCTCAAGTTGTCTGA
AA sequence Show only first row Show all	>Potri.003G173200.1 pacid=42784903 polypeptide=Potri.003G173200.1.p locus=Potri.003G173200 ID=Potri.003G173200.1.v4.1 annot-version=v4.1 MVVAQKVKEAQITEQDSLLLTRNLLRIAIFNISYIRGLFPEKYFNDKSVPALEMKIKKLMPMDAESRRLIDWMEKGVYDALQKKYLKTLLFCVCETIEGP MIEEYTFSFSYSDSESQEVSMNINRTGNKKQGGTFKYNSKNEITPNQMRSSACKMVRTLVQLMRTLDKMPEERAILMKLVYYDDVTPADYEPPFFRGCTE EEAHNAWTKHPLQMEVGNVNSKHFVLALKVKSVLDPCEDENDDMEDDEVSLGADSVERDGYSESGTEVNQSQEDQYIVAPVDKQRPEEDSGLVDEDDTQD QVEDEQQLARVKDWIISHHLDTIELTDVLSNFPDISVVLIEEIMGKLIEEGVLSKIGTDTYSKIKQKAFEYEFTAVKEEIDGDKAPQAEDRMYMKALYHV LPMEYVTISKLQNKLAGEANQSTARKLLEKMIRDGYVEAKGNRGLGKRVIHSSLTETKLMEVRRALGNDAMDIDTNQPYKKSNHPESQKMGNDYKDGSTC GVLHSIGSDLTRMVIRSEMNQNGSARCDQTISKTRDHGNTPTSRAEPVASRESFFPGKENVRANGNTNYLDEADTVICSRSSQDKRSRKTSTVKEPIVQC TKRQKSQVV

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT1G67370		ASY1, ATASY1	ASYNAPTIC 1, DNA-binding HORMA...		Potri.003G173200 [exp]	0	1	ASY1.1
AT3G14450		CID9	CTC-interacting domain 9 (.1)		Potri.001G377500 [exp]	6.70	0.8576
AT1G53040			Protein of unknown function (D...		Potri.001G399800 [exp]	11.57	0.8654
AT1G24480			S-adenosyl-L-methionine-depend...		Potri.010G052100 [exp]	13.85	0.8605
AT3G22290			Endoplasmic reticulum vesicle ...		Potri.006G023900 [exp]	14.17	0.8685
AT5G59305			unknown protein		Potri.001G237700 [exp]	18.33	0.8443
AT4G18550		AtDSEL	Arabidopsis thaliana DAD1-like...		Potri.011G064400 [exp]	25.86	0.8634
AT2G38580			Mitochondrial ATP synthase D c...		Potri.016G139000 [exp]	30.04	0.8570
AT4G21060			Galactosyltransferase family p...		Potri.016G013300 [exp]	34.64	0.8290
AT5G58100			unknown protein		Potri.006G080700 [exp]	41.37	0.8125
AT1G10200	LIM	WLIM1, SF3	WLIM1, GATA type zinc finger t...		Potri.002G118000 [exp]	42.89	0.8546

Compare expression of checked genes

Potri.003G173200 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.