CALS1.4 (Potri.003G214200) [POPLAR]

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| Symbol | CALS1.4 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Arabidopsis homologues
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Paralogs
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Flax homologues |
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Representative CDS sequence |
>Potri.003G214200.1 pacid=42786712 polypeptide=Potri.003G214200.1.p locus=Potri.003G214200 ID=Potri.003G214200.1.v4.1 annot-version=v4.1
ATGGCGTCGACGTCGAGAGGAGGAGGAGGAATGGGGATGGATCAGGCGGCGGCGGGGGTAGGGACTGGAGCGACGCCACCGCCGACGCAACGGAGGATAA
CGAGGACGCAGACTGCGGGGAATCTGGGAGAGTCGGTATTTGATAGCGAAATAGTGCCTTCTTCGCTTTTTGAGATAGCGCCGATTCTTCGTGTTGCAAA
TGAAGTTGAAACTAGCAATCCTAGAGTTGCTTATCTTTGTCGATTTTATGCCTTTGAGAAGGCTCATAGGTTGGATCCTACTTCGAGTGGACGAGGTGTT
CGTCAATTTAAAACCGCGCTTCTTCAGCGTTTGGAAAGGGAGAATGATCCAACCTTGATGGGAAGGGTTAAAAAAAGTGATGCACGAGAAATGCAGGGTT
TTTATCAGCATTACTACAAAAAATACATCCAAGCATTGCACAATGCTGCTGATAAAGCTGACCGCGCCCAGCTTACCAAGGCTTATCAGACTGCCAATGT
GCTCTTTGAGGTTTTAAAGGCCGTTAATATGACACAATCCATTGAAGTTGATCGCGAGATTTTAGAAGCTCAAGATGAAGTTGCAGAAAAAACTCAGATC
TATCTCCCTTACAATATTCTGCCACTTGATCCAGATAGTGCAGATCAAGCGATTATGAGATATCCTGAAATCCAAGCTGCTGTTTTGGCTCTGCGTAACA
CAAGGGGTCTTCCATGGCCCAAGGACTACAAGAAGAAAACGGACGAAGATGTTTTGGATTGGCTTCAAGCGATGTTTGGGTTTCAGAAGGATAATGTGGC
AAATCAAAGAGAGCACTTAATCTTATTACTTGCTAATGTGCACATGCGACAATTTGTCAAGCCAGATCAACAACCGAAGTTGGATGAGCGTGCATTGACT
GAAGTGATGAAGAAACTTTTTAAGAACTACAAAAAATGGTGCAAGTACTTGGACAGAAAAAGTAGCCTTTGGTTACCGACCATACAGCAGGAGGTGCAGC
AGCGTAAATTATTGTACATGGGTTTGTATCTTTTGATATGGGGGGAAGCTGCGAACCTCAGATTCATGCCGGAATGCCTTTGCTATATCTATCATCATAT
GGCATTTGAGTTATATGGCATGCTAGCTGGAAATGTCAGTCCTATGACTGGAGAAAATGTAAAGCCAGCCTATGGAGGTGAAGAAGAGGCTTTCTTGAGG
AAAGTTGTTACTCCTATATACAATGTGATTGCGAAGGAAGCTGAAAGGAGTAAAAAAGGGAAGTCAAAGCATTCTCAATGGAGGAACTATGACGATATAA
ATGAGTACTTCTGGTCAGTTGATTGTTTCCGCTTAGGCTGGCCAATGCGTGCAGATGCTGATTTCTTTTGCCTGTCTTCTGAACAGCTCCGTTTTGTACA
AAATGGGGATGATAAACCAGCCTATAGAGATCGATGGGTAGGAAAAGTTAATTTCGTGGAGATACGAACATTCTGGCATGTCTTTAGAAGCTTTGATCGA
ATGTGGAGTTTTTTTATTCTGTGCTTACAGGCTATGATTATTGTTGCTTGGAATGGTTCGGGGAAACTGAGTGCTATCTTTAGTGGTGATGTATTTAAGA
AAGTATTGAGTGTCTTCATCACTGCTGCCATATTAAAGCTTGGGCAAGCTATCCTTGATGTCATCCTTAGTTGGAAAGCACGGCAGATAATGTCATTTCA
TGTCAAGTTGAGATATATTTTGAAGGTTGTTTCAGCTGCTGCATGGGTGGTTGTTTTACCAGTAACTTATGCTTACACTTGGAAGGAGAATCCCCCAGGA
TTTGCTCAAACCATCAAAGGTTGGTTTGGCAACAGTTCAAGCTCGTCTTCCTTGTTTGTATTGGCTGTAGTTATCTACTTGGCACCAAATATGCTGGCAG
CATTATTGTTTCTTTTTCCCTTCATACGTCGATTCCTTGAGAGGTCCGACTATAGGATTGTGATGTTTATGATGTGGTGGTCGCAGCCTCGGCTCTATGT
TGGGAGGGGAATGCATGAGAGTACAATTTCTCTCTTCAAGTATACAATGTTTTGGGTTCTTCTTATAGTAACAAAGTTGGCATTTAGTTATTACATAGAG
ATTAAGCCTTTAGTTGATCCAACAAAAGCCATAATGGATGTCCATATAACGGCTTTCCAGTGGCATGAATTCTTTCCACAAGCAAAGAACAATATTGGTG
TGGTGATTGCGCTCTGGGCTCCAATCATTCTTGTGTATTTTATGGATGCCCAGATTTGGTATGCAATATTTTCCACATTATTTGGAGGAATTTATGGTGC
ATTTCGACGTCTTGGAGAGATTCGAACATTGGGAATGCTTAGATCTCGTTTCCAATCATTACCTGGTGCTTTCAATGCCTGTTTAATTCCAGACGAAAAG
AGTGAGCGAAAGAAGAAAAGCTTGAAGGCAAGGTTTTCTCGCAATTTTAATGAGAACCCCCCCAACAAAGATACAGAGGCACCAAGGTTTGCACAGCTTT
GGAATAAAATCATCAGTAGTTTTAGAGAAGAAGATCTTATAAGCAATAGGGAAATGGATTTGTTGCTTGTTCCATATTGGGCTGACCGTGATTTGGGTGT
TTTGGGCCTTACACAATGGCCTCCATTTTTGCTCGCTAGCAAGATCCCAATAGCATTAGACATGGCTAAGGACAGTAATGGTAAGGATAAAGAGCTGAAA
AAGAGAATCGAGGCTGACAACTACATGTCTTGTGCTGTTTGTGAATGCTATGCTTCTTTTAAGAACATCATCAAGTTTTTGGTTCAAGGGAGACCTGAGA
CAGAGGTGATTGATTCCATATTTGTTGATGTTGAGAATCACATAAAGCAAGGTGATCTGATAAAAGATTACAAAATGAGTGCTCTTCCTTTACTATACGA
TCACCTTGTGAAGCTTATCAAATGCTTGGTGGATAATAGGCCAGAGGACAGGGATCAAGTTGTGATTCTCTTCCAGGACATGCTGGAGGTTGTGACAAGA
GACATAATGGAGGATCAAATATCCAGCCTGGTGGACTCTATCCCTGATGGATCTGGATATGAGGGAATGAAACCCCTTGAACAACAATATCAGTTATTTG
CATCTGCTGGAGCTATCAAGTTTCCAATTGAGCCAGAAACAGAAGCATGGAAAGAGAAGATCAAGAGGCTTTATCTTTTGCTTACCACAAAAGAATCTGC
TATGGATGTACCATCCAACTTAGAAGCTAGGAGGCGTATTTCTTTCTTCTCAAACTCATTGTTTATGGACATGCCTGCGGCACCTAAAGTTCACAATATG
CTTTCTTTCTCTGTTTTAACTCCTTACTATACAGAGGAGGTACTTTTCTCCTTGCATGATTTGGAAGAGCCAAATGAAGATGGTGTTTCCATCCTCTTTT
ACTTGCAAAAGATCTTTCCAGATGAGTGGAACCACTTTCTTGAACGAGTGAACTGCACTGGTGAAGAAGAACTTAAAGAAAGAGATGACTTGGAAGAACT
TCGATTATGGGCATCATATAGGGGTCAGACTTTGACTAGAACAGTGAGAGGTATGATGTACTATCGGCATGCTTTGGAGCTTCAGGCATTCCTTGATATA
GCCAAACATGAAGATTTGATGGAGGGATATAAGGCAATTGAATTAAATACTGAAGATCAGTCAAAGGGGGGAAGCTCACTGTTGGCAGAGTGTCAAGCAG
TAGCTGATATGAAATTCACATATGTAGTATCATGCCAGCAATATGGGATTCACAAGCGTTCTGGTGATCTTCGTGCACAGGATATTCTGAGGCTCATGAC
AACATATCCGTCTCTCCGTGTGGCATACATTGATGAGGTTGAAGAAACTAATCCAGACAAATCCAAGAAGGTCATCCAAAAAGTTTACTATTCATCTCTA
GTGAAAGCTGCCTTGCCCAAGTCCATTGATTCTTCTGAGCCAGTGCAAAACTTGGACCAGGTCATTTACCGGATAAAACTTCCAGGACCAGCTATCTTGG
GTGAAGGAAAACCTGAAAACCAGAACCATGCTATTATCTTTACACGTGGAGAAGGCTTGCAAACAATAGATATGAACCAGGATAACTACATGGAAGAAGC
CTTAAAAATGAGGAATTTGCTGCAAGAATTTCTTAAGAAGCCTGATGGTGTGAGGCATCCTTCGATACTAGGACTTAGAGAGCATATATTTACTGGAAGT
GTGTCATCTCTTGCTTGGTTTATGTCAAATCAGGAAACCAGTTTTGTGACTATTGGTCAGAGGCTACTGGCCAACCCTCTGAAGGTGCGGTTCCACTATG
GTCATCCAGATGTATTTGATAGGCTTTTCCATCTCACTAGAGGGGGTGTTAGTAAAGCATCTAAGGTTATCAATCTGAGTGAAGATATATTTGCTGGCTT
CAATTCCACACTACGTGAAGGGAATGTTACCCATCATGAATATATACAAGTTGGGAAGGGGAGAGATGTGGGCCTTAATCAAATTTCCATGTTCGAGGCC
AAAATAGCTAATGGCAATGGAGAGCAGACTCTGAGTCGTGATATCTACCGGCTTGGACACCGTTTTGACTTCTTCCGAATGTTGTCTTGCTATTTCACCA
CAGTTGGTTTCTACTTCAGTACTCTGATTACAGTGCTCACAGTGTATGTATTCCTTTATGGCCGCCTATACCTTGTTCTCAGTGGGCTTGAAGAAGGTTT
GAGTACTCAGAAAGCAATTCGAGACAACAAACCTCTTCAAGTGGCTCTTGCTTCTCAATCTTTTGTTCAAATAGGATTTTTGATGGCATTGCCTATGTTG
ATGGAAATTGGCTTGGAAAGGGGTTTCCGCACTGCACTAAGTGAATTTTTATTGATGCAATTACAACTAGCACCTGTATTTTTCACATTTTCTCTTGGCA
CAAAGACCCACTACTATGGAAGGACATTGCTGCATGGTGGGGCAAAATATAGGTCCACTGGTAGAGGTTTTGTGGTCTTCCATGCCAAATTTGCTGACAA
CTATAGGCTTTATTCCCGCAGTCACTTTGTCAAGGGTATTGAGATGATGATTTTGCTTGTTGTTTATCAAATATTTGGTCAGCCATACAGAAGTGCAGTC
GCCTATGTCCTAATAACTATATCTATGTGGTTTATGGTTGGTACCTGGCTTTTTGCTCCATTCCTCTTCAATCCTTCTGGTTTTGAGTGGCAGAAGATTG
TTGATGATTGGTCTGATTGGAACAAGTGGATAAGTAACCGTGGAGGAATAGGTGTCCCACCAGAAAAGAGTTGGGAATCATGGTGGGAAGAAGAACAGGA
GCATCTTCGTCACTCGGGAAAGCGTGGTATTGTAGCGGAGATACTGTTATCTCTACGATTCTTTATCTATCAATATGGTTTAGTATATCATTTAACGATT
ACAAAGAAGATGAAAGACAGAAGTTTTTTGATCTATGGGATATCATGGCTGGTGATCCTTCTAATATTGTTTGTGATGAAGACTGTATCTGTTGGACGAC
GAAAGTTCAGTGCTAACTTCCAGCTTGTGTTTCGTCTAATCAAGGGAATGATATTCCTAACTTTTGTGTCCATTCTTGTCACTTTGATTGCACTGCCTCA
TATGACGGTGCAGGATGTCATTGTATGCATTCTCGCTTTCATGCCAACCGGTTGGGGAATGCTCTTGATTGCTCAAGCTTGTAAACCTGTTGTTCAACGA
GCCGGGTTTTGGGGATCAGTTCGGACACTTGCACGTGGGTATGAAATCGTTATGGGCTTGCTCCTGTTCACTCCAGTTGCATTCCTCGCCTGGTTCCCTT
TTGTGTCTGAATTCCAGACTCGTATGCTGTTCAACCAAGCATTCAGTAGAGGTCTGCAAATTTCTCGCATTCTTGGCGGCCATAGGAAGGATCGCTCCTC
AAGGAACAAGGAGTAA
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AA sequence
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>Potri.003G214200.1 pacid=42786712 polypeptide=Potri.003G214200.1.p locus=Potri.003G214200 ID=Potri.003G214200.1.v4.1 annot-version=v4.1
MASTSRGGGGMGMDQAAAGVGTGATPPPTQRRITRTQTAGNLGESVFDSEIVPSSLFEIAPILRVANEVETSNPRVAYLCRFYAFEKAHRLDPTSSGRGV
RQFKTALLQRLERENDPTLMGRVKKSDAREMQGFYQHYYKKYIQALHNAADKADRAQLTKAYQTANVLFEVLKAVNMTQSIEVDREILEAQDEVAEKTQI
YLPYNILPLDPDSADQAIMRYPEIQAAVLALRNTRGLPWPKDYKKKTDEDVLDWLQAMFGFQKDNVANQREHLILLLANVHMRQFVKPDQQPKLDERALT
EVMKKLFKNYKKWCKYLDRKSSLWLPTIQQEVQQRKLLYMGLYLLIWGEAANLRFMPECLCYIYHHMAFELYGMLAGNVSPMTGENVKPAYGGEEEAFLR
KVVTPIYNVIAKEAERSKKGKSKHSQWRNYDDINEYFWSVDCFRLGWPMRADADFFCLSSEQLRFVQNGDDKPAYRDRWVGKVNFVEIRTFWHVFRSFDR
MWSFFILCLQAMIIVAWNGSGKLSAIFSGDVFKKVLSVFITAAILKLGQAILDVILSWKARQIMSFHVKLRYILKVVSAAAWVVVLPVTYAYTWKENPPG
FAQTIKGWFGNSSSSSSLFVLAVVIYLAPNMLAALLFLFPFIRRFLERSDYRIVMFMMWWSQPRLYVGRGMHESTISLFKYTMFWVLLIVTKLAFSYYIE
IKPLVDPTKAIMDVHITAFQWHEFFPQAKNNIGVVIALWAPIILVYFMDAQIWYAIFSTLFGGIYGAFRRLGEIRTLGMLRSRFQSLPGAFNACLIPDEK
SERKKKSLKARFSRNFNENPPNKDTEAPRFAQLWNKIISSFREEDLISNREMDLLLVPYWADRDLGVLGLTQWPPFLLASKIPIALDMAKDSNGKDKELK
KRIEADNYMSCAVCECYASFKNIIKFLVQGRPETEVIDSIFVDVENHIKQGDLIKDYKMSALPLLYDHLVKLIKCLVDNRPEDRDQVVILFQDMLEVVTR
DIMEDQISSLVDSIPDGSGYEGMKPLEQQYQLFASAGAIKFPIEPETEAWKEKIKRLYLLLTTKESAMDVPSNLEARRRISFFSNSLFMDMPAAPKVHNM
LSFSVLTPYYTEEVLFSLHDLEEPNEDGVSILFYLQKIFPDEWNHFLERVNCTGEEELKERDDLEELRLWASYRGQTLTRTVRGMMYYRHALELQAFLDI
AKHEDLMEGYKAIELNTEDQSKGGSSLLAECQAVADMKFTYVVSCQQYGIHKRSGDLRAQDILRLMTTYPSLRVAYIDEVEETNPDKSKKVIQKVYYSSL
VKAALPKSIDSSEPVQNLDQVIYRIKLPGPAILGEGKPENQNHAIIFTRGEGLQTIDMNQDNYMEEALKMRNLLQEFLKKPDGVRHPSILGLREHIFTGS
VSSLAWFMSNQETSFVTIGQRLLANPLKVRFHYGHPDVFDRLFHLTRGGVSKASKVINLSEDIFAGFNSTLREGNVTHHEYIQVGKGRDVGLNQISMFEA
KIANGNGEQTLSRDIYRLGHRFDFFRMLSCYFTTVGFYFSTLITVLTVYVFLYGRLYLVLSGLEEGLSTQKAIRDNKPLQVALASQSFVQIGFLMALPML
MEIGLERGFRTALSEFLLMQLQLAPVFFTFSLGTKTHYYGRTLLHGGAKYRSTGRGFVVFHAKFADNYRLYSRSHFVKGIEMMILLVVYQIFGQPYRSAV
AYVLITISMWFMVGTWLFAPFLFNPSGFEWQKIVDDWSDWNKWISNRGGIGVPPEKSWESWWEEEQEHLRHSGKRGIVAEILLSLRFFIYQYGLVYHLTI
TKKMKDRSFLIYGISWLVILLILFVMKTVSVGRRKFSANFQLVFRLIKGMIFLTFVSILVTLIALPHMTVQDVIVCILAFMPTGWGMLLIAQACKPVVQR
AGFWGSVRTLARGYEIVMGLLLFTPVAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHRKDRSSRNKE
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DESeq2's median of ratios [POPLAR]
Coexpressed genes
Potri.003G214200 coexpression network
*The number of genes in the network is adjusted within 50 genes.*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.