ATMRP12.4 (Potri.004G034700) [POPLAR]

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| Symbol | ATMRP12.4 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Arabidopsis homologues
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Paralogs
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Flax homologues |
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Representative CDS sequence |
>Potri.004G034700.4 pacid=42794713 polypeptide=Potri.004G034700.4.p locus=Potri.004G034700 ID=Potri.004G034700.4.v4.1 annot-version=v4.1
ATGGGTTTGGAGGCATTGGTTTGGTATTGTCGACCTATGGCAAATGGGGTTTGGGCAAAAGAAGTGGATAATGCATTTGGTGCTTACACTCCCTGTGCCA
TTGACTCCCTAGTCATTTGCATTTCTCATCTGGTTCTTCTTGGTCTGTGCTTGTATCGAATATGGTTGATTATTGACAACAATACCAAAGTTCAAAAATA
CTGTCTCAGGACAAATTACTATAATTACATGCTGGGTTTTTTGGCTGCTTACTGCACAGTTCAGCCTTTATTAAGGTTGTTTATGGATGTCTCAATCTTC
AACCTGGATGGCCAGACTTCCCTTTCTCCCTTCGAGCTGGTCTCCTTGATTGTTGAGGCCCTTGCCTGGTGTTCCACTCTTATCATGATTGGTTTGGAAA
CAAAAATATACATTCGACAGTTTCGATGGTATGTGCGGTTTGGAGTCATTTATGTGTTGGTAGGGGAAGCGGCAATGCTCAATCTCATACTGTCAGTGAG
TGATTACTACAGTAGATTTACATTGTATATGTATATCAGCACGGTTTTCTGCCAGGTTTTGCTTGGCATTCTTCTACTTGTTTATATTCCCAATTTGGAT
CCTTATCCAGATTATGTTATGATGGAATCTGAGTCTCTTGATAATTGTGAATATGAAGCACTTCCTGGAAGAGAGCAAATATGTCCTGAGAGGCACGCCA
ACTTATTTTCTAGAATATTTTTTGGATGGTTGACTCCACTCATGAAGCAAGGCCATAAAAGACCTATTACTGAAAAGGATGTTTGGAAGTTAGACACATG
GGACCAGACTGAGACATTGATAAAAAAGTTCCAGACTTGTTGGGTTGAAGAATCTAAAAGGCCACAGCCACGTCTCTTAAGAGCACTAAACAATAGTCTT
GGGGGAAGGTTTTGGTTGGGAGGATTTTTTAAGATTGGCAATGATCTTTCTCAATTTGTGGGACCTATTGTATTGAGCCACCTCTTGCAGTCAATGCAAC
GAGGTGATCCAGCTTGGATTGGTTATATCTATGCCTTCATAATTTTCCTTGGGGTGTTGTTCGGTGCGCTTTGTGAATCTCAGTTTTTCCAGAATGTTAT
GCGTGTTGGTTTTCAGCTGAGGTCAACTCTGGTGGCTGCTATATTTCGTAAATCCTTGAAATTAACTCATGAGGGTCGAAAGAACTTTCCATCAGGTAAG
ATAACAAATATGATCACAACAGATGCCAATGCACTTCAGCAAATATGCCAACAACTTCATGGATTATGGTCTGCTCCATTTCGTATCACCATCTCCATGG
TTCTTCTTTACCAACAATTAGGTGTTGCTTCACTTTTTGGCTCACTAATGCTTGTTCTCATGGTCCCCACACAAACAATTTTGATGAGCAAGATGAGAAA
GCTAACTAAGGAAGGATTGCATAGGACAGACAAAAGAGTTAGCCTCATGAATGAAATCTTAGCTGCCATGGATGTTATGAAATGTTATGCATGGGAGAAG
AGCTTTCAATCCAGAATTCAAAGTGTGCGGGATGATGAGTTGTCATGGTTTCGCGGTGCACAATTACTATCGGCTTTCAATAGTTTTATACTGAACATCA
TCCCAGTTATTGTGACACTGGTTTCATTCGGCACGTTCACCTTGCTTGGCGGAGATTTGACACCTGCAAGGGCATTTACGTCACTCTCTCTGTTTCAAGT
CTTAAGATCTCCTCTAAACATGCTTCCTAACTTACTAAGCCAGGTTGTAAATGCAAATATATCATTGCAACGCTTGGAGGAACTGTTTTTAGCTGAAGAG
AGAATTTTAGCACCAAATCTGCCTCTTAAACTTGGAATTCCAGCTATCTCAATTGAAAATGGGAACTTTTTATGGGATTCAAAGCTAGAAAAGCCAACGT
TGTCAGATATCAATTTAAAAATACAAGTTGGCAGCTTAGTTGCAATTGTTGGCGGGACTGGAGAAGGAAAAACATCTCTTATATCAGCAATGCTTGGAGA
ACTGCCTCCTATGGAAGATGCAAGTGTAGTTATAAGAGGGACTGTTGCATATGTTCCTCAAGTTTCATGGATCTTCAATGCTACTGTGCGTGACAACATA
TTATTTAGGTCAGAATATGAACCTTCACGCTATTGGAAAGCTATTGATGTAACTGCATTACAACATGATCTCGACTTGCTTCCAGGCCATGACCTCACTG
AGATAGGTGAAAGAGGAGTCAATATTAGTGGAGGGCAGAAGCAAAGAGTTTCCATGGCTAGGGCTGTCTACTCCAATTCAGATGTATACATATTCGATGA
CCCTTTAAGCGCTTTAGATGCTCATGTTGGTCGACAGGTCTTCAACAGTTGTATTAAGGACGAGTTGCAAGGAAAAACCAGGGTTCTTGTCACCAACCAG
CTACATTTTCTTCCACAAGTGGATAAAATTATTCTTCTCAGTGAAGGTATGATTAAAGAGGAGGGAACCTTTGAGGAACTCTCTGAAAATGGCAAGCTGT
TCCAGAAGCTGATGGAAAATGCAGGGAAAATGGAAGAGCTAGTGGAAGAAAAGAACAGTGAAAATTTGGACTGCAAAAGCTTAAAACCAGCAGCTAATGG
GGGAAATGATTTGCCACAAAAAGCAGGTTACAAGATGAAAGTGAAAGGAGGGAAATCTGTACTTATCAAGCAAGAAGAACGTGAAACAGGTGTTGTCAGT
TGGAATGTTTTGATTAGGTATAACAATGCATTAGGAGGCATATTGGTGGTTTTAATAATCTTTTTGTGCTACTTATTAACTGAAGTTCTTCGAGTTTCAA
GAAGTACATGGTTGAGTGTTTGGACTAATCAAAGTACTTTGGAGAGTTATAAGCCAGGATACTACATTTTCGTGTATGCACTTCTATCATTTGGTCAGGT
GATTGTGACTCTAGTGAACTCTTATTGGTTAATCAGTTCAAGTCTTCATGCAGCCAAAAGACTTCATGATGCCATGCTAGACTCTATCCTACGAGCTCCC
ATGCTATTTTTCCACACTAACCCATCTGGGAGAATAATCAATAGGTTTGCGAAGGATCTAGGTGAAATAGATCGTAACGTGGCCAATATTGCCAACAATT
TTCTAAACCAAGCCTGGCAGCTGTTTTCAACTTTTGTGCTGATAGGCATTGTGAGCACAATATCATTGTGGGCTGTTATGCCACTTCTGATCTTGTTTTA
TTCAGCCTATCTATATTATCAGAGCACATCCCGTGAAGTGAAACGTCTGGATTCCATTACCAGGTCTCCAGTTTATGCACAATTTGGAGAAGCGTTAAAT
GGTTTGTCAAGTATTCGTGCATATAAAGCATATGATTGGATGGCAATCATCAATGGGAAGTCTATGGACAATAATATCAGGTTTACTCTGGTAAATATGA
GTTCAAATCACTGGCTCACCATAAGGTTGGTAACACTAGGAGGGATCATGATTTGGTTGATAGCAACATTTGCAGTTTTGGGGAATGGAAGAACAGAAAA
TCATGTGGAATTTGCATCTGAAATGGGTCTACTACTTAGTTATACTTTGAACATCACTGGTCTGTTGAGTAATGTTCTAAGACATGCTAGTAGAGCTGAA
AATAGCTTAAACTCTGTTGAGCGTGTTGGCACATACATGGATTTACCCTCCGAAGCTCCTGCCATTGTCGAGACCAATCGTCCTCCTCCTGCATGGCCTT
CGTCAGGATCAATTAAATTCCGAGATGTTGTTCTGCGTTACAGACCCGAGCTTCCTCCAGTCTTACATCATTTGTCCTTTGAAGTCTCTCCTAGTGAAAA
GCTAGGAATAGTTGGAAGAACAGGAGCAGGGAAATCTAGCATGCTAAATGCACTGTTCCGTATTGTAGAACTGGAAAGAGGAGAAATCACCATTGATGGT
TGTGACGTTGCTAAGTTTGGACTCACAGATTTGCGGAAAATTCTCAGTATCATACCCCAATCACCAGTTCTCTTCTCAGGAACTGTGCGATTTAATCTCG
ATCCATTTAGTGAACACAATGATGCTGACCTATGGGAGGCTTTGGAGAGGGCACATTTAAAGGATGCCATTAGAAATAATTCTTTTGGTCTGGATGCTGA
GGTTTTTGAGGGAGGGGAGAATTTTAGTGTTGGACAGAGACAACTACTAAGTCTCGCACGAGCGCTGCTGCGAAGATCTAAGATTCTTGTTCTTGATGAA
GCTACTGCTTCTGTTGATGTTAGAACCGATGCTCTTATCCAGAAAACCATTCGAGAAGAATTCAGATCGTGCACAATGCTAGTCATCGCTCACAGACTAA
ATACCATTATTGACTGCGACAGAATTCTTGTGCTTGAGGCTGGTCAGGTCTTAGAACATGGCACCCCAGAGGAACTGCTACTACCAAACGAAGGAAGCGC
ATTCTCTAGGATGGTTCAAAGTACTGGTCCAGCAAATGCTCAATACTTGTATAGCCTGGTGTTTGAAAGTAAAGAGAATAAGTTGAGTAAAAGGAAGAAT
GATCATAGATGGATAGACTCTTCAAGATGGGCTGCTGCTGCCCAACTGGCCCTGGTTGTTAGTCTCACTTCTTCGGAGAATGGTCTTCCAATGTTAGATG
TTGAAGACGAGGACAACATCCTCAGGAAAACGAAAGATGCAGTTATAAGGCTGCAGGATGTCCTGGTGGGGAAGTATGATGAAGCGATATGTGATACACA
GCAACAGAGCCAAGTTCCCCAAGATGGATGGTGGTCAGCTTTCTACAGAATGATTGAAGGTTTGGCTGTAATGGGCAGGTTGTCACGCGGTAGGCATCAA
CAATATGATTATGAAAACGAACCCCTTGATTGA
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AA sequence
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>Potri.004G034700.4 pacid=42794713 polypeptide=Potri.004G034700.4.p locus=Potri.004G034700 ID=Potri.004G034700.4.v4.1 annot-version=v4.1
MGLEALVWYCRPMANGVWAKEVDNAFGAYTPCAIDSLVICISHLVLLGLCLYRIWLIIDNNTKVQKYCLRTNYYNYMLGFLAAYCTVQPLLRLFMDVSIF
NLDGQTSLSPFELVSLIVEALAWCSTLIMIGLETKIYIRQFRWYVRFGVIYVLVGEAAMLNLILSVSDYYSRFTLYMYISTVFCQVLLGILLLVYIPNLD
PYPDYVMMESESLDNCEYEALPGREQICPERHANLFSRIFFGWLTPLMKQGHKRPITEKDVWKLDTWDQTETLIKKFQTCWVEESKRPQPRLLRALNNSL
GGRFWLGGFFKIGNDLSQFVGPIVLSHLLQSMQRGDPAWIGYIYAFIIFLGVLFGALCESQFFQNVMRVGFQLRSTLVAAIFRKSLKLTHEGRKNFPSGK
ITNMITTDANALQQICQQLHGLWSAPFRITISMVLLYQQLGVASLFGSLMLVLMVPTQTILMSKMRKLTKEGLHRTDKRVSLMNEILAAMDVMKCYAWEK
SFQSRIQSVRDDELSWFRGAQLLSAFNSFILNIIPVIVTLVSFGTFTLLGGDLTPARAFTSLSLFQVLRSPLNMLPNLLSQVVNANISLQRLEELFLAEE
RILAPNLPLKLGIPAISIENGNFLWDSKLEKPTLSDINLKIQVGSLVAIVGGTGEGKTSLISAMLGELPPMEDASVVIRGTVAYVPQVSWIFNATVRDNI
LFRSEYEPSRYWKAIDVTALQHDLDLLPGHDLTEIGERGVNISGGQKQRVSMARAVYSNSDVYIFDDPLSALDAHVGRQVFNSCIKDELQGKTRVLVTNQ
LHFLPQVDKIILLSEGMIKEEGTFEELSENGKLFQKLMENAGKMEELVEEKNSENLDCKSLKPAANGGNDLPQKAGYKMKVKGGKSVLIKQEERETGVVS
WNVLIRYNNALGGILVVLIIFLCYLLTEVLRVSRSTWLSVWTNQSTLESYKPGYYIFVYALLSFGQVIVTLVNSYWLISSSLHAAKRLHDAMLDSILRAP
MLFFHTNPSGRIINRFAKDLGEIDRNVANIANNFLNQAWQLFSTFVLIGIVSTISLWAVMPLLILFYSAYLYYQSTSREVKRLDSITRSPVYAQFGEALN
GLSSIRAYKAYDWMAIINGKSMDNNIRFTLVNMSSNHWLTIRLVTLGGIMIWLIATFAVLGNGRTENHVEFASEMGLLLSYTLNITGLLSNVLRHASRAE
NSLNSVERVGTYMDLPSEAPAIVETNRPPPAWPSSGSIKFRDVVLRYRPELPPVLHHLSFEVSPSEKLGIVGRTGAGKSSMLNALFRIVELERGEITIDG
CDVAKFGLTDLRKILSIIPQSPVLFSGTVRFNLDPFSEHNDADLWEALERAHLKDAIRNNSFGLDAEVFEGGENFSVGQRQLLSLARALLRRSKILVLDE
ATASVDVRTDALIQKTIREEFRSCTMLVIAHRLNTIIDCDRILVLEAGQVLEHGTPEELLLPNEGSAFSRMVQSTGPANAQYLYSLVFESKENKLSKRKN
DHRWIDSSRWAAAAQLALVVSLTSSENGLPMLDVEDEDNILRKTKDAVIRLQDVLVGKYDEAICDTQQQSQVPQDGWWSAFYRMIEGLAVMGRLSRGRHQ
QYDYENEPLD
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DESeq2's median of ratios [POPLAR]
Coexpressed genes
Potri.004G034700 coexpression network
*The number of genes in the network is adjusted within 50 genes.*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.