Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol	CYP735A6,CYP735.2
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G38450 735 / 0 CYP735A1 "cytochrome P450, family 735, subfamily A, polypeptide 1", cytochrome P450, family 735, subfamily A, polypeptide 1 (.1) AT1G67110 691 / 0 CYP735A2 "cytochrome P450, family 735, subfamily A, polypeptide 2", cytochrome P450, family 735, subfamily A, polypeptide 2 (.1) AT2G46950 367 / 3e-121 CYP709B2 "cytochrome P450, family 709, subfamily B, polypeptide 2", cytochrome P450, family 709, subfamily B, polypeptide 2 (.1) AT2G46960 365 / 3e-121 CYP709B1 "cytochrome P450, family 709, subfamily B, polypeptide 1", cytochrome P450, family 709, subfamily B, polypeptide 1 (.1.2) AT2G26710 348 / 3e-114 CYP72B1, CYP734A1, BAS1 PHYB ACTIVATION TAGGED SUPPRESSOR 1, Cytochrome P450 superfamily protein (.1) AT3G14690 336 / 1e-109 CYP72A15 "cytochrome P450, family 72, subfamily A, polypeptide 15", cytochrome P450, family 72, subfamily A, polypeptide 15 (.1) AT4G27710 330 / 1e-107 CYP709B3 "cytochrome P450, family 709, subfamily B, polypeptide 3", cytochrome P450, family 709, subfamily B, polypeptide 3 (.1) AT5G52400 330 / 2e-107 CYP715A1 "cytochrome P450, family 715, subfamily A, polypeptide 1", cytochrome P450, family 715, subfamily A, polypeptide 1 (.1) AT3G14660 330 / 2e-107 CYP72A13 "cytochrome P450, family 72, subfamily A, polypeptide 13", cytochrome P450, family 72, subfamily A, polypeptide 13 (.1) AT3G14640 326 / 9e-106 CYP72A10 "cytochrome P450, family 72, subfamily A, polypeptide 10", cytochrome P450, family 72, subfamily A, polypeptide 10 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.017G114200 [exp] 1012 / 0 AT5G38450 724 / 0.0 "cytochrome P450, family 735, subfamily A, polypeptide 1", cytochrome P450, family 735, subfamily A, polypeptide 1 (.1) Potri.013G160800 [exp] 364 / 9e-121 AT5G24910 468 / 6e-161 EUI-like p450 A1, cytochrome P450, family 714, subfamily A, polypeptide 1 (.1) Potri.018G070900 [exp] 355 / 5e-117 AT2G26710 796 / 0.0 PHYB ACTIVATION TAGGED SUPPRESSOR 1, Cytochrome P450 superfamily protein (.1) Potri.006G022200 [exp] 351 / 1e-115 AT2G46950 527 / 0.0 "cytochrome P450, family 709, subfamily B, polypeptide 2", cytochrome P450, family 709, subfamily B, polypeptide 2 (.1) Potri.008G026200 [exp] 350 / 3e-115 AT5G24910 488 / 8e-169 EUI-like p450 A1, cytochrome P450, family 714, subfamily A, polypeptide 1 (.1) Potri.006G154500 [exp] 349 / 9e-115 AT2G26710 789 / 0.0 PHYB ACTIVATION TAGGED SUPPRESSOR 1, Cytochrome P450 superfamily protein (.1) Potri.008G026300 [exp] 346 / 9e-114 AT5G24910 486 / 5e-168 EUI-like p450 A1, cytochrome P450, family 714, subfamily A, polypeptide 1 (.1) Potri.002G134500 [exp] 343 / 4e-112 AT1G75130 540 / 0.0 "cytochrome P450, family 721, subfamily A, polypeptide 1", cytochrome P450, family 721, subfamily A, polypeptide 1 (.1) Potri.015G145100 [exp] 342 / 4e-112 AT5G52400 646 / 0.0 "cytochrome P450, family 715, subfamily A, polypeptide 1", cytochrome P450, family 715, subfamily A, polypeptide 1 (.1)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10033555 [exp] 761 / 0 AT5G38450 694 / 0.0 "cytochrome P450, family 735, subfamily A, polypeptide 1", cytochrome P450, family 735, subfamily A, polypeptide 1 (.1) Lus10017595 [exp] 756 / 0 AT5G38450 697 / 0.0 "cytochrome P450, family 735, subfamily A, polypeptide 1", cytochrome P450, family 735, subfamily A, polypeptide 1 (.1) Lus10033044 [exp] 350 / 1e-114 AT2G26710 803 / 0.0 PHYB ACTIVATION TAGGED SUPPRESSOR 1, Cytochrome P450 superfamily protein (.1) Lus10025756 [exp] 347 / 6e-114 AT2G46950 578 / 0.0 "cytochrome P450, family 709, subfamily B, polypeptide 2", cytochrome P450, family 709, subfamily B, polypeptide 2 (.1) Lus10026085 [exp] 343 / 2e-112 AT2G46960 375 / 6e-125 "cytochrome P450, family 709, subfamily B, polypeptide 1", cytochrome P450, family 709, subfamily B, polypeptide 1 (.1.2) Lus10008423 [exp] 340 / 5e-111 AT5G24910 462 / 9e-159 EUI-like p450 A1, cytochrome P450, family 714, subfamily A, polypeptide 1 (.1) Lus10039234 [exp] 339 / 7e-111 AT5G52400 653 / 0.0 "cytochrome P450, family 715, subfamily A, polypeptide 1", cytochrome P450, family 715, subfamily A, polypeptide 1 (.1) Lus10025755 [exp] 352 / 8e-110 AT1G80300 923 / 0.0 nucleotide transporter 1 (.1) Lus10036822 [exp] 335 / 5e-108 AT2G26710 410 / 4e-137 PHYB ACTIVATION TAGGED SUPPRESSOR 1, Cytochrome P450 superfamily protein (.1) Lus10026084 [exp] 332 / 5e-108 AT2G26710 375 / 6e-125 PHYB ACTIVATION TAGGED SUPPRESSOR 1, Cytochrome P450 superfamily protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF00067 [poplar] [flax] p450 Cytochrome P450
Representative CDS sequence Show only first row Show all	>Potri.004G100400.1 pacid=42794254 polypeptide=Potri.004G100400.1.p locus=Potri.004G100400 ID=Potri.004G100400.1.v4.1 annot-version=v4.1 ATGGCTGTGATGATGATGGTGTTGACAAGTCTATTAGTTATATTCATCTTTTCATTTCTCAAGGTTGCATATGATAACATATCATGTTATTTTCTTACAC CAAGGCGCATCAAGAAAATCATGGAGAAGCAAGGAGTGCGTGGCCCAAAACCCCGCCCTCTCACCGGAAACATCCTAGACGTTGCCGCTTATGTTTCTAA ATCAACTTCCAAGGACATGGATCACATCACTCATGACACTGTCAATCGTCTCTTGCCACATTATGTTGCTTGGTCTAAACAATACGGGAAAAGGTTCATA TTTTGGAATGGGGTAGAGCCACGGCTGTGCATATCGGAGACAGAAATGATCAAGGAACTTTTAACAAAGTATAGCACTAAATCTGGAAAATCATGGCTGC AGAGAGAAGGAACAAAACATTTTATTGGTCGTGGTTTGTTAATGGCTAACGGCAGTGATTGGTATCATCAACGCCATATTGCGGCGCCGTCATTCATGGG AGAAAGGCTCAAGAGCAAAGCAGGGCTGATGGTGGAATGCACAAAGAATATGCTCCAATCACTGCAAAATGCAGTAGAATCAGGCCAAACAGAGGTAGAA ATTGGTGAATACATGTCTAGAGTTACTGCTGATATAATTTCAAGAACCCAATTCGGTAGTAGCTATGAAAAGGGGAAGCAAATATTCCATCTCTTAACAG AATTGCAAAGTCTTTGTCATCAGGCAACTAGGCACTTGTGCCTTCCCGGAAGCCGGTTCTTTCCAAGCAACTACAACAGACAAATAAAATCTAAGAAGAT GGAGGTGGATAGATTACTGCTGGAGATTATACAAAGCCGGAAAGACTGCGTAGAGATCGGCAGAAGTAGTTCTTATGGAGATGATTTACTGGGGATGCTT CTAAATGAGATGGAGAAGAAGAGAAGTGATGGTTTTAATATAAACCTGCAGTTGGTTATGGATGAATGTAAGACATTCTTCTTTGCTGGACATGAGACAA CTTCTCTTTTACTCACATGGACAGTCATGCTTCTAGCTAGCAACCCTTCCTGGCAAGAAAAGGTGAGAGCAGAGGTGAAAGAAGTCTGCAATGGTGAAAC TCCTTCAATCGACCATCTTCCCAAATTCAATCTGTTAAACATGGTTGTAAGCGAGTCTCTGAGGCTCTACCCATCGGGTACTTTGCTCCCTCGAATGGCC TTCGAAGATATTAAACTAGGTGATCTTGATATTCCAAAGGGGCTACAGATATGGATTCCGGTTCTAGCAATTCACCACAGCGAAGAATTATGGGGAAAGG ATGCAAATGAGTTCAATCCTGACAGATTTGCCTCCAAGTCATTTGCTCCCGGACGGCATTTCATCCCTTTTGCGGCCGGACCCCGGAATTGTATAGGCCA ATCCTTTGCTATGATGGAAGCTAAAATCATATTAGCCATGTTGATTTCCCAGTTTAGCTTCAATATTTCAGATAGTTACCGCCATGCTCCTGTTGTTGTC CTTACAATAAAACCAAAATATGGGGTTCAAGTTTACTTGAAGCCCTTGAATTCGTGA
AA sequence Show only first row Show all	>Potri.004G100400.1 pacid=42794254 polypeptide=Potri.004G100400.1.p locus=Potri.004G100400 ID=Potri.004G100400.1.v4.1 annot-version=v4.1 MAVMMMVLTSLLVIFIFSFLKVAYDNISCYFLTPRRIKKIMEKQGVRGPKPRPLTGNILDVAAYVSKSTSKDMDHITHDTVNRLLPHYVAWSKQYGKRFI FWNGVEPRLCISETEMIKELLTKYSTKSGKSWLQREGTKHFIGRGLLMANGSDWYHQRHIAAPSFMGERLKSKAGLMVECTKNMLQSLQNAVESGQTEVE IGEYMSRVTADIISRTQFGSSYEKGKQIFHLLTELQSLCHQATRHLCLPGSRFFPSNYNRQIKSKKMEVDRLLLEIIQSRKDCVEIGRSSSYGDDLLGML LNEMEKKRSDGFNINLQLVMDECKTFFFAGHETTSLLLTWTVMLLASNPSWQEKVRAEVKEVCNGETPSIDHLPKFNLLNMVVSESLRLYPSGTLLPRMA FEDIKLGDLDIPKGLQIWIPVLAIHHSEELWGKDANEFNPDRFASKSFAPGRHFIPFAAGPRNCIGQSFAMMEAKIILAMLISQFSFNISDSYRHAPVVV LTIKPKYGVQVYLKPLNS

---

DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

---

Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT5G38450		CYP735A1	"cytochrome P450, family 735, ...		Potri.004G100400 [exp]	0	1	CYP735A6,CYP735.2
AT1G31050	bHLH	bHLH111	basic helix-loop-helix (bHLH) ...		Potri.010G098900 [exp]	4.00	0.8412
AT2G24130			Leucine-rich receptor-like pro...		Potri.003G184100 [exp]	6.24	0.7804
AT3G15990		SULTR3;4	sulfate transporter 3;4 (.1)		Potri.001G179400 [exp]	6.48	0.7632	SULTR3.7
AT2G31160		OBO1, LSH3	ORGAN BOUNDARY 1, LIGHT SENSIT...		Potri.001G460400 [exp]	15.23	0.7370
AT1G49230			RING/U-box superfamily protein...		Potri.001G309700 [exp]	16.24	0.7114
AT2G34790		MEE23, EDA28	MATERNAL EFFECT EMBRYO ARREST ...		Potri.011G166601 [exp]	31.22	0.7110
					Potri.010G230433 [exp]	32.49	0.7219
AT3G17980		AtC2	Arabidopsis thaliana C2 domain...		Potri.008G131500 [exp]	36.00	0.7060
AT2G42490			Copper amine oxidase family pr...		Potri.015G082900 [exp]	38.70	0.7113
					Potri.008G136533 [exp]	38.76	0.7346

Compare expression of checked genes

Potri.004G100400 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.