Potri.004G101250 [POPLAR]

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Arabidopsis homologues
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Paralogs
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Flax homologues |
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Representative CDS sequence |
>Potri.004G101250.2 pacid=42796339 polypeptide=Potri.004G101250.2.p locus=Potri.004G101250 ID=Potri.004G101250.2.v4.1 annot-version=v4.1
ATGTCAAAGAACTTCGTGAGAGAGAACGTGCCTCTCTCTCGATTCGGTGTTTTAGTCGCACAATTAGAATCCATAGGAGCCTCCGCTTCCCAACAATCCC
CTGACCCTCTCCTCTCTTTCGATCTCCTCTCCGATCTCCTCTCCGCCATCGATGAAGAGCCACGGGAATCTATTTTGTTATGGCAAAGAAAATGCGAGGA
TGCATTGTATTCATTGCTCAAGCTTGGCGCGCGGCGGCCAGTGCGGCATTTGGCATCAGTGGCAATGGCTAAGATCATATCTAGAGGGGATAGTATTTCG
ATATACTCCAGAGCGAGTAGTCTCCAAGGGTTTCTTTCTGATGCTAAGAGAAGCGAACCTCAAAGAGTTGCCGGTGCTGTGCGATGCTTGGGAGAATTAT
ATCAGCATTTCGGAAGAAAAATTACCTCAGGATTGCCTGAAACAACTATTATTGCCTCAAAACTTATGAAGTTTCATGAGGATTTTGTGAGACAAGAGGC
TCTACTGATGCTTGAAAAAGCTTTGGAAGGGTCTGGTGGTAGTGCTGCATCTACAGCATATACGGAGGCATTCCGTCTCATCACACGTTTTGCTATAGGA
GATAAATCATTTGTTGTTAGAATAGCTGGAGCTCGTTGTCTGAAGGTATTTGCTAGCATTGGTGGACCATGCCTAGGAGTTGGTGAAATTGAGAATTCAG
CTTCTTATTGTGTCAAGGCCCTTGAGGATCCTGTATCACTTGTCAGGGATGCATTTTCTGAAGCACTAGGCTCATTGCTAGCTCTTGGAATGAATCCAGA
GGCTCAGGTTCAACCCAGGGGAAAAGGTCCTTTTCCTCCAGCAAAAAAACTAGAAGGTGGTTTGCAGAGGCATTTGGCTTTGCCCTTCACAAAAGTGAGT
GGAACTCGGTTGAAGGATGTGCGAATTGGCATAACCTTATCTTGGGTTTACTTTTTACAGGCAATTCGTCTAAAATATCTACATCCAGATAGCGAGCTTC
AGCAGTATGCTTTGCAGGTTATGGAGATGCTTCGCTCAGATACTTCTGTTGATGCTCATGCACTGGCTTGCATTCTTTACGTCCTCAGAGTTGGTGTAAC
TGATCAGATGACTGAACCTACTCAAAGGGGCTTTTTAGTTTTCCTAGGAAAGCAGCTTGAGTCTTCTGATGCCACTCCTTCCATGAAAATTGCTGCTTTA
CGTACATTGTCATACACTTTGAAAACATTGGGCGAGGTTCCATTAGAATTCAAGGAACTCTTTGACAGCACAATTGTTGCTGCAGTATCTCATTCTTCTC
AACTTGTACGCATTGAGGCTGCCTTGGCATTGCGTGTTTTGGCTGAGGTCGATCCTACATGTGTTGGTGGTTTGATTTCTTATGTTGTGACCACACTAAG
TGCTTTGAGAGACAATATTTCATTTGAAAAGGGAAGCAATCTGAAAACTGAGCTTGATTCTTTGAATGGACAAGCTACTGTTTTGGCTGCTTTGGTTTCT
ATTTCACCCAAACTGCCTCTTGGCTATCCAGCCAGATTACCAAGATCAGTGCTGGAACTTTCAAAGAAAATGCTAACAGAATCTTCAAGAAATCCTATAG
CTGCAATAGTTGAGAAAGAAGCTGGATGGTTACTTTTGTCCTCGCTATTATCTTCAATGCCAAAGCAGGAGCTTGAAGACCAGGTTTTTGATATTCTTTT
GCTATGGGCTACCCTCTTTAGTGGAAATCCAGAACGAGAAATTCAAAAAATTGAAGATTTGGCTTCTACTATATGTGTGTGGTCTGCTGCTGTTGATGCA
CTGACAGCATTTGTAAGATGCTTTATTTCTCATAATGCAGCAAACAATGGGATTCTACTTCAACCAGTTATGGTATACTTGAGTAGTGCCCTGTCCTATA
TACTACTGCTACAACGTAAAGAACTGCCTAATATTAAGCCTGCAATAGACATATTCATCATCAGAACGTTAATGGCCTATCGGGCCCTCCCTGATTCAAT
GGCATATAAAAGTGACCATCCTCAGATTATCCAATTATGTACCATTCCATTCAGGGATGCTGCTAGATGTGAGGAAAGTTCATGCTTGAGGTTGCTGCTG
GACAAAAGAGATGCATGGTTGGGTCCTTGGATTCCTGGAAGGGATTGGTTTGAAGATGAAGTTCGTGCTTTTCAAGGTGGAAAAGATGGCCTTATGCCTT
GTGTATGGGACAATGAACCCTCAAGTTTTCCTCTGCCGGAAACAATAAACAAGATGTTGGTGAACCAGATGCTCCTTTGCTTCGGAATCATGTTTGCTTC
TCAAGATAATGGTGGGATGTTGTTGCTTCTTGGAATGGTTGAGCAATGTCTAAAAGCTGGAAAAAAGCAATCATGGCATGAAGCCAGTGTTACCAATATA
TGTGTTGGGTTACTCGCAGGATTGAAGGCTTTGATTGCTTTACGTCCCCAACCTTTGGGACCTGAGATATTGAATGGAGCTCAGGCAATTTTTCAGAGTA
TTCTGGCAGAGGGAGACATCTGTGCATCCCAACGTAGAGCATCGTCAGAAGGTCTTGGTCTATTAGCTCGCCTGGGAAATGATATCTTTACAGCCAAAAT
GACTAGGTTGCTTCTTGGTGACCTTCCCGGTGCAACAGATTTCAACTATGCTGGCTCAATTGCCTTTGCACTTGGCTGCATTCATCGCAGTGCTGGAGGA
ATGGCATTGTCAAGTTTAGTGCCTCAAACTGTGAGCTCAATATCTTTGCTAGCTAAAAGTACGATTACTGGGTTACAGATCTGGTCGTTGTATGGTCTTC
TTTTGACTATTGAAGCTTCTGGTTTTTCATATGTATCTCATGTTCAGGCAACACTTGGGCTTGCTTTGGACATTCTTCTGTCTGAGGAGAATGGGTTGGT
TGACTTTCAGCAAGGAGTGGGCCGCCTTATAAATGCTATTGTTGCTGTTCTTGGTCCTGAACTTGCCCCTGGAAGCATTTTCTTTTCACGCTGCAAGTCT
GTCATTGCAGAGATAAGCTCCTGGCAAGAAACGGCCACATTGCTAGAGAGTGTTCGTTTTACACAGCAACTTGTCCTTTTTGCTCCGCAAGCTGTTTCCG
TGCACACTCATGTGCAAACGCTTCTCTCAACTCTGTCATCAGGACAGCCAACTTTAAGGCATCTTGCTGTCTCCACCCTCCGGCATCTCATTGAAAAGGA
TCCAGTTTCTATCAGTGATGAGCAAATAGAAGATAACTTGTTTCACATGCTGAACGAGGAAACTGATTCTGTGATTGGGAGTCTGGTACAGGCCACAATT
ATGCGATTGCTCCTTGCTTCATGCCCTTCATGTCCATCTCACTGGATATTGATTTGTCGTAATATGGTACTCGCTACATTGGGAAGGCAAGATACTGATA
CCAATAGGAGTGCTGGAAATGATCCTCTAAATGGTCCAGACAACGACTCAGGAATGGACCTCGGGGAAGATGATGAAAACATGGTTAGTAGCTCTAAAGG
CATGCCGGTGCAAGGTTATGCTTTTGGAGCTCACAGGATCAATCATAATAGAGATAAACACCTCAGATACCGAACTAGAGTTTTTGCTGCCGAGTGTTTG
AGTCATCTGCCTATAGCTGTTGGTAAGAATCCTGCTCATTTTGATCTCTCTTTGGCGAGGAAACAATCTACTAATGGGGAACTCTCGCGAGACTGGCTAG
TTCTCCATGTTCAAGAGTTAATTTCACTGGCTTATCAGATTAGCACAATACAGTTTGAAAACATGCGGCCAATTGGTGTGAGACTCCTAACTGCAATTCT
TGACAAGTTTGAAAAATCCCCAGACCCAGAGCTTCCTGGACATCTTCTACTGGAACAATACCAGGCCCAACTAGTATCTGCTGTTCGCACAGCATTGGAT
GCATCTTCTGGTCCTATTCTTCTCGAGGCAGGACTTCAGCTGGCCACTAAGATAATGACCAGTGGAGTACTGGGTGGTGATCAAGTTGCAGTTAAACGCA
TGTTTTCATTAATTTCTAGGCCACTGAATGACTTCAAGGATGTTTATTATCCTTCATTCGCAGAGTGGGTCTCATGCAAGATCAAGATAAGACTTCTGGC
TGCTCATGCCTCTCTCAAATGTTACACTTTCTCATTTTTGAGGAGACACCATAGTGGAGTTCCAGACGAGTATCTAGCATTGTTACCATTGTTTTCTAAG
AGTTCAAATATTCTGGGGAAGTACTGGATTGGGGTTCTGAAGGATTACAGTTATATTTGCTTATGCCTGGATGCCAAGAAAAATTGGAATCCATTCCTTG
ATGGAATTCAATCACCTATCGTTTCATCAAAAGTGCAGCTCAGTTTAGAGGAATCCTGGCCAGTGATTCTGCAAGCACTTGCATTAGATGCAATTCCTGC
AAATACCCATGGGAATTCAAAGGAAACAGATGAAAATACATCAAATAATAGTTTAATATCTGGATATAGCATGGTTGAACTCAAGTTGGAAGATTATCGA
TTTCTATGGGGGTTTTCCCTGCTTGTTCTATTTCAGCGACAACATCCAACTCTTACTAGACGAATAATATTACTAAGTTCTGCTGAAGTAAGATACGGTG
GAGATTCGCCAACTGAAGAGACAAATACTGCAGCTTTGAAGCAATATGAGATTGTTCTGCCAGTTTTCCAGTTTCTCTTGACAGAAAGATTTTTCACTGA
AGAATTTATTACTCTGGATATTTGCCGAGAATTGCTGCAGGTTTTCTTCTACTCTATTTACATGGATAATTCTTGGAATACTCTTTCAATATCAGTTCTA
TCACAGATTGTGCAGAATTGTCCCGCAGATTTTCTTGAAGCAGAAGCTTTAGGTTATCTGGTCGTGGAACTTCTCTTGGCTTATATCTTCAATGTTTTTC
AGAGAACCTATGAGGTCCTATCAGATCACTCAAACTGTGAGGAGTTGATATCTCCATTGTTTATTACAGCAAAGACACTTGTGAAGCGTTGCGAACCAAA
GAAGCAATTAAAGTCTGTGGTCGTGGCCTTAGTGTTGGTTGGTTACAAGTGTATCAGAGAAGCTTTGACAGAGTTAAGCTTTTCAACAGTTAATGACTTT
GTAAAGTGCGTGATTCCCTTGATGAAGAAACTTGTTGATGACTCTGCTGAACATGGTAATAATAGCAGTCATCTGAGGGCAATCCTGGGAACTTGTCTGA
ATGTGATTGCTGATTTGATTAAGGATTGCATCAAGGGCATTCACCTTCTGGAGAACAAAAGATCTGACTTACTCAAGTTACTGCAATTGAAGCTTTCTTT
CTCTATTGAGCAAATGATGTTATTTGCCAAGCTAGTTTATGAAAGTGTATATGGCAGACAAGCTGAAGACAGCAATACTATTTGTCTTGCTGTGCTCAAG
TATTGCAGCAAATACATCCAGACTGTGCTGAAAGATTCAAATGTACAGGTTCAAGCAATTGGATTGCAAGTGCTCAAAACCATGACTCAGAGAAGCACCA
ACATAGAAGACAGTTCTTTCTTCATATTTTTTAGTGGAGAGCTTGTTACAGAAATTTTCCACATAATCCACACCTCGTTGAAGAAACCAGTAAGTAAAGA
ATCTGTGTCTATTGCTGGTGAGTGCTTGAGATTTCTAGTGCTTCTACAAACACTTTCAAAAGCAAATGAATGTCAGAGAGGCTTCATGAATCTGCTTCTC
AAAGCCATTGTCATGATATTCTCAGCATCAGAAGATGATTCCTCTCAGGAAGTCAGTGATATAAGAACCAATGCTGTAAGGCTTGTTTCTTCTCTTGCTC
AAATTCCTTCATCGGCAGTCCACTTTAAGGATGTCTTGTTATCAATGCCCGTGTCACATAAACAACAACTTCAGGGGGTAATCCGTGCTTCTGTGGCACA
GCATCAAAATGCATCACCAATGAAAACTGTGGCATCATTAGAAATAAAATTACCAGTGCCAAAAGATTCCCAAACATCATCCACATCAACACTGCCAATA
GAAGGAAGTAGACAGAAAAGTTCTACCCCATCATCCCCTGTTCACTTTGACCAGGTCACAATGGAAGATGACCAAGAGGACGAAGATGACTGGGATGCTT
TCCAGTCTTTCCCTGCTTCAACTGATGCAGCTGGTACTGTTTCAAAAGCAGAAAGTGCTGCACAAGAACCAGACCTGGTTGAGAAATCTATTTCAGAAAG
TGAGTTTCAAGACTTTTCTACATCCAAACCCGTCAACAATGAAGGTGACATGAGCAGTGCTGAGCATCAAGAAGTGATTTCTAATGACCTAGGACATAAT
ATCAAACCCGAACCCTATAATGATCAATATCATAATAGAGAAGAGGAGGGAGTGGCATTGAACCAAGAAAATGTAAAAATATCAACTGATCTTCAACTTA
TCGACGAAGCACCGAGCCACAAGGATGAAGAGGGAGCAGTGTCTAGCCAAGAGAATATCGAAACCTCACCTGATCTTAAAGTTATTGAGGATACAGAAGG
GTCGATTCAAGTGAATATAGTGGAAGATTATGAGCAGACAATGCATAGCCTACGTAACAGTATTGATCATCAGAGTCAAGTATCACCAGATGATCTTCAA
CCTGTTGAAGTTAAAGAACAGGTCGAAGCAAATATAGTGCAGGACCATGACCAGCTCAAGGTTCCTCCAGATCAGCAAAATGTTGTTCCATGA
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AA sequence
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>Potri.004G101250.2 pacid=42796339 polypeptide=Potri.004G101250.2.p locus=Potri.004G101250 ID=Potri.004G101250.2.v4.1 annot-version=v4.1
MSKNFVRENVPLSRFGVLVAQLESIGASASQQSPDPLLSFDLLSDLLSAIDEEPRESILLWQRKCEDALYSLLKLGARRPVRHLASVAMAKIISRGDSIS
IYSRASSLQGFLSDAKRSEPQRVAGAVRCLGELYQHFGRKITSGLPETTIIASKLMKFHEDFVRQEALLMLEKALEGSGGSAASTAYTEAFRLITRFAIG
DKSFVVRIAGARCLKVFASIGGPCLGVGEIENSASYCVKALEDPVSLVRDAFSEALGSLLALGMNPEAQVQPRGKGPFPPAKKLEGGLQRHLALPFTKVS
GTRLKDVRIGITLSWVYFLQAIRLKYLHPDSELQQYALQVMEMLRSDTSVDAHALACILYVLRVGVTDQMTEPTQRGFLVFLGKQLESSDATPSMKIAAL
RTLSYTLKTLGEVPLEFKELFDSTIVAAVSHSSQLVRIEAALALRVLAEVDPTCVGGLISYVVTTLSALRDNISFEKGSNLKTELDSLNGQATVLAALVS
ISPKLPLGYPARLPRSVLELSKKMLTESSRNPIAAIVEKEAGWLLLSSLLSSMPKQELEDQVFDILLLWATLFSGNPEREIQKIEDLASTICVWSAAVDA
LTAFVRCFISHNAANNGILLQPVMVYLSSALSYILLLQRKELPNIKPAIDIFIIRTLMAYRALPDSMAYKSDHPQIIQLCTIPFRDAARCEESSCLRLLL
DKRDAWLGPWIPGRDWFEDEVRAFQGGKDGLMPCVWDNEPSSFPLPETINKMLVNQMLLCFGIMFASQDNGGMLLLLGMVEQCLKAGKKQSWHEASVTNI
CVGLLAGLKALIALRPQPLGPEILNGAQAIFQSILAEGDICASQRRASSEGLGLLARLGNDIFTAKMTRLLLGDLPGATDFNYAGSIAFALGCIHRSAGG
MALSSLVPQTVSSISLLAKSTITGLQIWSLYGLLLTIEASGFSYVSHVQATLGLALDILLSEENGLVDFQQGVGRLINAIVAVLGPELAPGSIFFSRCKS
VIAEISSWQETATLLESVRFTQQLVLFAPQAVSVHTHVQTLLSTLSSGQPTLRHLAVSTLRHLIEKDPVSISDEQIEDNLFHMLNEETDSVIGSLVQATI
MRLLLASCPSCPSHWILICRNMVLATLGRQDTDTNRSAGNDPLNGPDNDSGMDLGEDDENMVSSSKGMPVQGYAFGAHRINHNRDKHLRYRTRVFAAECL
SHLPIAVGKNPAHFDLSLARKQSTNGELSRDWLVLHVQELISLAYQISTIQFENMRPIGVRLLTAILDKFEKSPDPELPGHLLLEQYQAQLVSAVRTALD
ASSGPILLEAGLQLATKIMTSGVLGGDQVAVKRMFSLISRPLNDFKDVYYPSFAEWVSCKIKIRLLAAHASLKCYTFSFLRRHHSGVPDEYLALLPLFSK
SSNILGKYWIGVLKDYSYICLCLDAKKNWNPFLDGIQSPIVSSKVQLSLEESWPVILQALALDAIPANTHGNSKETDENTSNNSLISGYSMVELKLEDYR
FLWGFSLLVLFQRQHPTLTRRIILLSSAEVRYGGDSPTEETNTAALKQYEIVLPVFQFLLTERFFTEEFITLDICRELLQVFFYSIYMDNSWNTLSISVL
SQIVQNCPADFLEAEALGYLVVELLLAYIFNVFQRTYEVLSDHSNCEELISPLFITAKTLVKRCEPKKQLKSVVVALVLVGYKCIREALTELSFSTVNDF
VKCVIPLMKKLVDDSAEHGNNSSHLRAILGTCLNVIADLIKDCIKGIHLLENKRSDLLKLLQLKLSFSIEQMMLFAKLVYESVYGRQAEDSNTICLAVLK
YCSKYIQTVLKDSNVQVQAIGLQVLKTMTQRSTNIEDSSFFIFFSGELVTEIFHIIHTSLKKPVSKESVSIAGECLRFLVLLQTLSKANECQRGFMNLLL
KAIVMIFSASEDDSSQEVSDIRTNAVRLVSSLAQIPSSAVHFKDVLLSMPVSHKQQLQGVIRASVAQHQNASPMKTVASLEIKLPVPKDSQTSSTSTLPI
EGSRQKSSTPSSPVHFDQVTMEDDQEDEDDWDAFQSFPASTDAAGTVSKAESAAQEPDLVEKSISESEFQDFSTSKPVNNEGDMSSAEHQEVISNDLGHN
IKPEPYNDQYHNREEEGVALNQENVKISTDLQLIDEAPSHKDEEGAVSSQENIETSPDLKVIEDTEGSIQVNIVEDYEQTMHSLRNSIDHQSQVSPDDLQ
PVEVKEQVEANIVQDHDQLKVPPDQQNVVP
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DESeq2's median of ratios [POPLAR]
Coexpressed genes
Potri.004G101250 coexpression network
*The number of genes in the network is adjusted within 50 genes.*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.