Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol	CYP710.1
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G34500 717 / 0 CYP710A1 cytochrome P450, family 710, subfamily A, polypeptide 1 (.1) AT2G34490 676 / 0 CYP710A2 cytochrome P450, family 710, subfamily A, polypeptide 2 (.1) AT2G28850 635 / 0 CYP710A3 cytochrome P450, family 710, subfamily A, polypeptide 3 (.1) AT2G28860 628 / 0 CYP710A4 cytochrome P450, family 710, subfamily A, polypeptide 4 (.1) AT2G32440 112 / 2e-26 ATKAO2, CYP88A4, KAO2 ARABIDOPSIS ENT-KAURENOIC ACID HYDROXYLASE 2, ent-kaurenoic acid hydroxylase 2 (.1.2) AT1G05160 106 / 2e-24 ATKAO1, CYP88A3 ENT-KAURENOIC ACID OXYDASE 1, "cytochrome P450, family 88, subfamily A, polypeptide 3", cytochrome P450, family 88, subfamily A, polypeptide 3 (.1) AT5G45340 102 / 4e-23 CYP707A3 "cytochrome P450, family 707, subfamily A, polypeptide 3", cytochrome P450, family 707, subfamily A, polypeptide 3 (.1.2) AT2G29090 100 / 1e-22 CYP707A2 "cytochrome P450, family 707, subfamily A, polypeptide 2", cytochrome P450, family 707, subfamily A, polypeptide 2 (.1.2) AT3G19270 100 / 2e-22 CYP707A4 "cytochrome P450, family 707, subfamily A, polypeptide 4", cytochrome P450, family 707, subfamily A, polypeptide 4 (.1) AT4G19230 97 / 2e-21 CYP707A1 "cytochrome P450, family 707, subfamily A, polypeptide 1", cytochrome P450, family 707, subfamily A, polypeptide 1 (.1.2)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.002G069600 [exp] 115 / 2e-27 AT5G45340 296 / 1e-95 "cytochrome P450, family 707, subfamily A, polypeptide 3", cytochrome P450, family 707, subfamily A, polypeptide 3 (.1.2) Potri.014G179100 [exp] 111 / 4e-26 AT1G05160 741 / 0.0 ENT-KAURENOIC ACID OXYDASE 1, "cytochrome P450, family 88, subfamily A, polypeptide 3", cytochrome P450, family 88, subfamily A, polypeptide 3 (.1) Potri.001G242600 [exp] 106 / 2e-24 AT2G29090 652 / 0.0 "cytochrome P450, family 707, subfamily A, polypeptide 2", cytochrome P450, family 707, subfamily A, polypeptide 2 (.1.2) Potri.009G033900 [exp] 104 / 9e-24 AT2G29090 677 / 0.0 "cytochrome P450, family 707, subfamily A, polypeptide 2", cytochrome P450, family 707, subfamily A, polypeptide 2 (.1.2) Potri.004G235400 [exp] 100 / 1e-22 AT4G19230 778 / 0.0 "cytochrome P450, family 707, subfamily A, polypeptide 1", cytochrome P450, family 707, subfamily A, polypeptide 1 (.1.2) Potri.013G161800 [exp] 100 / 1e-22 AT1G05160 694 / 0.0 ENT-KAURENOIC ACID OXYDASE 1, "cytochrome P450, family 88, subfamily A, polypeptide 3", cytochrome P450, family 88, subfamily A, polypeptide 3 (.1) Potri.014G029100 [exp] 99 / 7e-22 AT3G19270 665 / 0.0 "cytochrome P450, family 707, subfamily A, polypeptide 4", cytochrome P450, family 707, subfamily A, polypeptide 4 (.1) Potri.019G078600 [exp] 99 / 8e-22 AT5G36110 476 / 2e-165 "cytochrome P450, family 716, subfamily A, polypeptide 1", cytochrome P450, family 716, subfamily A, polypeptide 1 (.1) Potri.018G133901 [exp] 98 / 1e-21 AT5G36110 526 / 0.0 "cytochrome P450, family 716, subfamily A, polypeptide 1", cytochrome P450, family 716, subfamily A, polypeptide 1 (.1)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10028129 [exp] 743 / 0 AT2G34500 711 / 0.0 cytochrome P450, family 710, subfamily A, polypeptide 1 (.1) Lus10042833 [exp] 525 / 0 AT2G34500 496 / 5e-175 cytochrome P450, family 710, subfamily A, polypeptide 1 (.1) Lus10028594 [exp] 118 / 2e-28 AT5G45340 299 / 1e-96 "cytochrome P450, family 707, subfamily A, polypeptide 3", cytochrome P450, family 707, subfamily A, polypeptide 3 (.1.2) Lus10018898 [exp] 114 / 5e-27 AT5G45340 301 / 3e-97 "cytochrome P450, family 707, subfamily A, polypeptide 3", cytochrome P450, family 707, subfamily A, polypeptide 3 (.1.2) Lus10033105 [exp] 109 / 2e-25 AT1G05160 305 / 2e-98 ENT-KAURENOIC ACID OXYDASE 1, "cytochrome P450, family 88, subfamily A, polypeptide 3", cytochrome P450, family 88, subfamily A, polypeptide 3 (.1) Lus10043357 [exp] 103 / 3e-23 AT2G32440 643 / 0.0 ARABIDOPSIS ENT-KAURENOIC ACID HYDROXYLASE 2, ent-kaurenoic acid hydroxylase 2 (.1.2) Lus10012675 [exp] 100 / 2e-22 AT3G19270 586 / 0.0 "cytochrome P450, family 707, subfamily A, polypeptide 4", cytochrome P450, family 707, subfamily A, polypeptide 4 (.1) Lus10035685 [exp] 100 / 3e-22 AT4G19230 714 / 0.0 "cytochrome P450, family 707, subfamily A, polypeptide 1", cytochrome P450, family 707, subfamily A, polypeptide 1 (.1.2) Lus10034768 [exp] 94 / 2e-20 AT5G45340 731 / 0.0 "cytochrome P450, family 707, subfamily A, polypeptide 3", cytochrome P450, family 707, subfamily A, polypeptide 3 (.1.2) Lus10033308 [exp] 94 / 2e-20 AT5G45340 732 / 0.0 "cytochrome P450, family 707, subfamily A, polypeptide 3", cytochrome P450, family 707, subfamily A, polypeptide 3 (.1.2)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF00067 [poplar] [flax] p450 Cytochrome P450
Representative CDS sequence Show only first row Show all	>Potri.004G131700.1 pacid=42795000 polypeptide=Potri.004G131700.1.p locus=Potri.004G131700 ID=Potri.004G131700.1.v4.1 annot-version=v4.1 ATGACAACCTTGCTATTGTCCTGTGCAACTTTCTTATCAACTCTAGTTCCATACATAATTTCTTTCGTTATTTTCCTCGTTTTGGTGGAGCAGGTGAGTT ATTTGATAAAGAAACGAGGAGCTCCGGGTCCTGTTTTTGTGCTTCCATTTATTGGCAACGCAATTTCTTTAGTAAGAGATCCAACTTCATTCTGGGACAC CCAATCCGCCAATAGCTCTCGTTCTGGATTCTCTGCTAACTATATAATCGGGAGGTTCATATTGTACATTCGCGACACTAATCTCTCCCACCTCATTTTC TCAAACATAAGGCCTGATGCTTTCTTGCTTGTTGGCCACCCTTTTGGGAAGAAGCTATTTGGTGAGCATAATTTGATTTATAAGTTCGGTCAGGAACACA AGGATCTCCGCCGCCGAATCGCTCCCAACTTCACTCCTCGTGCTCTTTCAACCTACACCTCACTCCAGCAGATAATCATTCTCAAGCACTTGAAAAAATG GGAGAGCTTATCCTCAAACAGTCCAAACAAGTCCATCTCTCTCCGCTTGTTAGTTCGAGACATGAACCTCGAGACTTCACAGACCGTTTTTGTCGGCCCG TATTTGAGCGAAGAAGAGCGGGAGCGATTCAAGCTGGATTACAATATGTTCAACGTTGGACTAATGAAACTCCCTATTGATCTCCCAGGTTTCGCATTTC GAAATGCCAGGTTGGCTGTTGACAGGTTAGCAGAAACCCTCTCAGAATGTGTAATGAAGAGCAAGAAAAAAATGGACAATAACCATGAACCATCTTGCTT GATAGATTTCTGGATGCAAGAAATGCTTAAAGAAATCTCCGCTGCCAAATCCGCTGGAGAGCCAGTTCCACCGCACACTAGTGAAGCCGAGATCGGAGGC CACCTCTTTGACTTCCTCTTTGCTGCTCAGGATGCTTCAACGTCATCGCTCCTTTGGGCGGTGGCGCTTCTCGACTCGAACCCGGAAGTCCTGCTGAAGG TTCGAAAGGAAGTGTCGAGTTTCTGGTCACCAGAATCTGATGGTTTAATAAACACGGAGCAGCTCAGGGAAATGAAGTACACGCAGGCGGTGGCGCGTGA GGTGCTGAGGTACCGCGCCCCTGCGACGTTAGTCCCCCATGTAGCTATGAAGGAGTTTGCTTTGACGGAGTCGTACACGATTCCTAAAGGGACCATTGTG TTCCCGTCGGTTTTAGACAGTTCATTTCAAGGGTTCACTAAACCGGACCGGTTTGACCCGGACCGTTTCTCTGAGGACAGGCAAGAGGATCAGTTATTCA AAAAGAATTTCTTAACTTTTGGAGCTGGAGCCCACCAGTGTGTGGGTCAAAGGTATGCCCTCAATCATTTGGTTTTATTCATCGCCATGTTCTGTGCGTT GCTTGATTTTAAGCGGTACAGAGCGGACGGCTGTGATGATATTGTTTACAATCCAACTATCTGTCCAAAGGATGGCTGCATTGTTTCCTTGAAAAGGCGG GGCACGCGATATCCTAATCTCTCTTTGGAGTGA
AA sequence Show only first row Show all	>Potri.004G131700.1 pacid=42795000 polypeptide=Potri.004G131700.1.p locus=Potri.004G131700 ID=Potri.004G131700.1.v4.1 annot-version=v4.1 MTTLLLSCATFLSTLVPYIISFVIFLVLVEQVSYLIKKRGAPGPVFVLPFIGNAISLVRDPTSFWDTQSANSSRSGFSANYIIGRFILYIRDTNLSHLIF SNIRPDAFLLVGHPFGKKLFGEHNLIYKFGQEHKDLRRRIAPNFTPRALSTYTSLQQIIILKHLKKWESLSSNSPNKSISLRLLVRDMNLETSQTVFVGP YLSEEERERFKLDYNMFNVGLMKLPIDLPGFAFRNARLAVDRLAETLSECVMKSKKKMDNNHEPSCLIDFWMQEMLKEISAAKSAGEPVPPHTSEAEIGG HLFDFLFAAQDASTSSLLWAVALLDSNPEVLLKVRKEVSSFWSPESDGLINTEQLREMKYTQAVAREVLRYRAPATLVPHVAMKEFALTESYTIPKGTIV FPSVLDSSFQGFTKPDRFDPDRFSEDRQEDQLFKKNFLTFGAGAHQCVGQRYALNHLVLFIAMFCALLDFKRYRADGCDDIVYNPTICPKDGCIVSLKRR GTRYPNLSLE

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT2G34500		CYP710A1	cytochrome P450, family 710, s...		Potri.004G131700 [exp]	0	1	CYP710.1
ATCG01310		ATCG01310.1, RP...	ribosomal protein L2 (.1)		Potri.013G136466 [exp]	4.58	0.9859
AT3G26980		MUB4	membrane-anchored ubiquitin-fo...		Potri.001G325900 [exp]	7.34	0.9384	Pt-ATGP4.2
ATCG01310		ATCG01310.1, RP...	ribosomal protein L2 (.1)		Potri.011G074401 [exp]	7.93	0.9856
ATCG00820		ATCG00820.1, RP...	ribosomal protein S19 (.1)		Potri.005G154674 [exp]	9.38	0.9846
					Potri.005G150475 [exp]	12.12	0.9725
AT5G17590			Putative membrane lipoprotein ...		Potri.019G043701 [exp]	14.96	0.9369
ATCG00820		ATCG00820.1, RP...	ribosomal protein S19 (.1)		Potri.013G137688 [exp]	15.16	0.9819
					Potri.014G186308 [exp]	15.65	0.9439
					Potri.008G224328 [exp]	15.87	0.8656
ATCG01310		ATCG01310.1, RP...	ribosomal protein L2 (.1)		Potri.005G154300 [exp]	16.91	0.9818

Compare expression of checked genes

Potri.004G131700 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.