Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G50030 250 / 7e-66 TOR target of rapamycin (.1.2) AT5G40820 187 / 2e-46 ATATR, ATRAD3, ATR ARABIDOPSIS THALIANA ATAXIA TELANGIECTASIA-MUTATED AND RAD3-RELATED, Ataxia telangiectasia-mutated and RAD3-related (.1) AT3G48190 131 / 1e-29 PIG1, ATATM, ATM pcd in male gametogenesis 1, ARABIDOPSIS THALIANA ATAXIA-TELANGIECTASIA MUTATED, ataxia-telangiectasia mutated (.1) AT2G35075 62 / 7e-09 unknown protein AT4G36080 59 / 1e-07 phosphotransferases, alcohol group as acceptor;binding;inositol or phosphatidylinositol kinases (.1.2.3) AT1G60490 54 / 2e-06 PI3K, ATVPS34 PHOSPATIDYLINOSITOL 3-KINASE, vacuolar protein sorting 34 (.1) AT2G17930 54 / 4e-06 Phosphatidylinositol 3- and 4-kinase family protein with FAT domain (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.001G289200 [exp] 234 / 6e-61 AT1G50030 4080 / 0.0 target of rapamycin (.1.2) Potri.009G084500 [exp] 226 / 1e-58 AT1G50030 4038 / 0.0 target of rapamycin (.1.2) Potri.004G179000 [exp] 180 / 2e-44 AT5G40820 3459 / 0.0 ARABIDOPSIS THALIANA ATAXIA TELANGIECTASIA-MUTATED AND RAD3-RELATED, Ataxia telangiectasia-mutated and RAD3-related (.1) Potri.015G076650 [exp] 131 / 1e-29 AT3G48190 3584 / 0.0 pcd in male gametogenesis 1, ARABIDOPSIS THALIANA ATAXIA-TELANGIECTASIA MUTATED, ataxia-telangiectasia mutated (.1) Potri.012G075100 [exp] 55 / 1e-06 AT1G60490 1388 / 0.0 PHOSPATIDYLINOSITOL 3-KINASE, vacuolar protein sorting 34 (.1) Potri.007G057850 [exp] 54 / 2e-06 AT2G17930 1074 / 0.0 Phosphatidylinositol 3- and 4-kinase family protein with FAT domain (.1) Potri.005G114300 [exp] 51 / 2e-05 AT2G17930 6266 / 0.0 Phosphatidylinositol 3- and 4-kinase family protein with FAT domain (.1)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10023840 [exp] 4786 / 0 AT1G50030 239 / 2e-62 target of rapamycin (.1.2) Lus10025091 [exp] 182 / 6e-45 AT5G40820 3033 / 0.0 ARABIDOPSIS THALIANA ATAXIA TELANGIECTASIA-MUTATED AND RAD3-RELATED, Ataxia telangiectasia-mutated and RAD3-related (.1) Lus10023991 [exp] 179 / 3e-44 AT5G40820 3276 / 0.0 ARABIDOPSIS THALIANA ATAXIA TELANGIECTASIA-MUTATED AND RAD3-RELATED, Ataxia telangiectasia-mutated and RAD3-related (.1) Lus10037246 [exp] 135 / 9e-31 AT1G50030 4101 / 0.0 target of rapamycin (.1.2) Lus10035661 [exp] 135 / 9e-31 AT1G50030 2590 / 0.0 target of rapamycin (.1.2) Lus10019489 [exp] 129 / 5e-29 AT3G48190 3373 / 0.0 pcd in male gametogenesis 1, ARABIDOPSIS THALIANA ATAXIA-TELANGIECTASIA MUTATED, ataxia-telangiectasia mutated (.1) Lus10000064 [exp] 79 / 5e-16 AT3G48190 248 / 2e-76 pcd in male gametogenesis 1, ARABIDOPSIS THALIANA ATAXIA-TELANGIECTASIA MUTATED, ataxia-telangiectasia mutated (.1) Lus10041911 [exp] 58 / 1e-07 AT2G17930 989 / 0.0 Phosphatidylinositol 3- and 4-kinase family protein with FAT domain (.1) Lus10041910 [exp] 57 / 3e-07 AT2G17930 5862 / 0.0 Phosphatidylinositol 3- and 4-kinase family protein with FAT domain (.1) Lus10028458 [exp] 57 / 3e-07 AT2G17930 6325 / 0.0 Phosphatidylinositol 3- and 4-kinase family protein with FAT domain (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF02260 [poplar] [flax] FATC FATC domain
Representative CDS sequence Show only first row Show all	>Potri.004G147800.1 pacid=42794838 polypeptide=Potri.004G147800.1.p locus=Potri.004G147800 ID=Potri.004G147800.1.v4.1 annot-version=v4.1 ATGATGCAAGGACTTCACCAACAACAACAACTCGCTGCTCTCCTTTCCGCTGCTCTCCCTAAAGACTCCCCCTCCCCCTCCCCCTCCACCGCCATCACCA CCACCACAACAATCACCCCTGCCTCAACAACAGCCAAATCAACCAACTCGGAAAACACCGACGACGACGACGCAGCTAGACTCGGCGCCATTAACTCACT CCACCGCGCTATTGTTTACCCTCCTAATTCACTCCTTGTCTCTCACTCCGCTTCTTTTCTCTCTCAAGGATTCTCTCAACTCCTAACTGACAAGTCATAT GCCATTAGGCAATCTGCAGCGACTGCTTATGGGGCATTATGTGCTGTGATATGTGCGATTCTAATTGGATCAAATGGAAGGCAAAACCATGTTATGCTTG GAAGTATTGTTGACAGGTTCATTGGTTGGGCTTTGCCGTTGCTTAGCAATGGTGGTGGGGGTGATGGGACAACAGAACTGGCATTGGAAGGGTTGCGTGA GTTTCTTAGTGTTGGAGATGTTGTGGGAATTGAGAGATATGCTCTGCCTATCCTCAAAGCATGTCAAGAACTTTTGGAGGATGAGAGAACCTCCTTGAAT TTGTTGCATAGGCTTTTGGGTGTATTGACTTTGGTTTCGATCAAGTTTTCTAGGTTTTTTCAGCCTCATTTTCTGGATATTGTGGATTTACTTCTTGGTT GGGTGTTGGTGCCGGATCTTGCAGAATCAGACAGGCGTGTTATCATGGATAGTTTCTTGCAGTTTCAGAAACATTGGGTGGGGAATTTGCAGTTCTCTTT GGGATTGTTGTCTAAGTTTTTGGGGGACATGGATGTATTGGTTCAGGATGGGAGTCGTGGAACACCAGCACAATTTCGTAGGTTGCTGGCACTCCTTTCT TGTTTTACAACAGTGTTGCAGTCCACTGCTTCAGGTTTGTTGGAAATGAATCTACTTGAACAGATAAGTGAATCTCTTAGAGCATTGGTTCCTCAGTTGT TGGGATGCTTATCCATGGTTGGAAGGAAATTTGGGTGGGCAAAATGGACTGGTGATTTGTGGAAATGCTTGACCCTCTTGGCTGAGATACTATGCGAAAA GTTTTCTACCTTTTACCCGCTTGCACTTGATATCTTATTCCAAAGCTTGGATTCACAACCCGGGGCTGAGAAGATCACCTCCTTTCAAGTTCATGGTGTT TTAAAGACTAATCTTCAGCTGTTATCTCTACAAAAACTTGGTCTTTTCCCATCATCAGCCCAGAAAGTATTACAATTTGATGCGCTCATATCACAGCTGC GTTTGCATCCGAGTCATTTGGTGACTGGAAGTTCTGCTGCTACTTATATTTTCTTGCTTCAGCATGGGAACAATGAAGTTGTTCAACAGGCAATTGGTGT GCTAATCAAAGAGATGGAGTTGCTGAAGGCCATGCTAAATGAAACTTTGAATCTTGGAGATGAAAATTATAGTGTTAAAGATTCTAAATCCTATTCCAAA ATGGAGTTTTTAGCATTGATGAAATTTGATTTGAAAGTTTTGTTGACTTGTGTTTCCTTGGGTGGGGGCAGCAGCTTGATTTGCCAACCAGAACTTGCCA CCATATATCTGAAGAGGTCGGATATGTTGGCTTCTTTTATTGTTGAGAAACTGGATCCCTTTAATTTACCTATTCAGGCATATGTGGAGTTACAGGTCAA TGTTATCCAGACAATGGAGAGGCTAACCGCAGTTGAATTCTTGAGCAGGTGGTCCATAAGAAATCAGACTACCCAGACTGCTTCTTTGGATGACACTGTT TATAAAGTGAATAATGTAAATGGTTTCAGGGATGATATTTCTGCTGTGATTATTGAGCATTTAAGGAAGTACAGTGCGTTCCTCATCAAAGCTATAAATG TTTCCGCCCCTCTCACAGTCAAAGTGGTAGCCTTAGAGTGGATCCAAAAATTCTCAAATAATCTTATTGCCATCTATGAAAATTCAAATGTGAATACTTA TTTTGATGAAGCATTTGGATACATTGGTGGTACTGGCAGCATTATATTTTCGGTATTTGATGCAGCATTTGACAGTGAACCGAAGGTGAGGTTGCAGGTT GCATCAGTTCTGGAGGCGCTTTTGCAGGCAAGGCTTGTACATCCCATTCACTTTTATCCCATGGCTGAAGTGGTTTTGGAAAAGCTTGGTGATCCAGATG TTGACATTAAGAATTCATTTGTGAGACTGCTTTCCCATGTCTTGCCAATGACAATGTTTGCATTTGGTTTACATGACCAAGGAACATCCAGCACCTATAG GTCCAACGCAATTGTTTCGTTTAACAGTTCAAATTTGAACTGGAAGCAAGTGTTTTCCCTGAAGCAACTAAGACAGCAACTGCACTCACAGCAACTTGTT TCCATTTTGAGTTACATCTCTCAAAGATGGAAGGTGCCTCTTTCTTCTTGGATCCAGCGGCTCATTCATAGCTGTCGGAGTTCAAACGACCTTGTTTTGG GTCAACTTGAGGAAACACGGACATTTGTTGCTGATGTTCTTTGGTTGAACAAAAAACTGGATGATGATATTCTTGAAAGGATATGCTCAGTTGATAATTT GGCTGGTGCTTGGTGGGCTATTCATGAAGCAGCTAGATATTGTATTGCCACGCGTCTTCGGACCAATCTTGGTGGACCTACTCAAACTTTTGCAGCACTG GAAAGAATGCTGCTGGACATTGCACATGTGCTACAGCTTGATATTGAGCAGAATGATGGAAACCTAAGTATAATAGGCTCTTCTGGTGCTCACTTGTTAC CTATGAGGTTGTTATTGGATTTTGTTGAGGCTCTAAAAAAAAATGTATATAATGCATATGAAGGGTCAGCCATTTTACCATCTGCTTCTCGCCCAAGCTC CTTGTTCTTCCGTGCAAACAAGAAGGTTTGCGAGGAGTGGTTTTCTCGTATATGTGAGCCAATGATGAATGCGGGTTTGGCACTGCAATGTCATGATGCT ACCATTCACTATTGTACTGTACGTTTGCAGGAACTCAAAAGTGTCTTATCTTCATCTTTGAAAGACAAATCCAGGGCACAGGCATCTGAGAACCTCCATA GCATCAGGGATAGGTTGTTTGGAGACATTTTGAGGGTTCTACAGCACATAGCATTGGCTCTATGTAGGAGTCATGAACCTAAGGCTTTGATTGGTCTACA TCAATGGGCTTCAATGACATTTTCTTCCTTGCTTATGGATGAGAATCAGTCTCCAAGTCATAATGGAATATCAGGGCCTTTTGCATGGATCACTGGCCTG GCATACCAGGCTGAAGGTCAATATGAGAAGGCTGCTGCACACTTCACTCACTTGCTTCAGAATGAGGAATCATTGAGCTCTATGGGTTCTGATGGTGTGC AGTTTGCTATTTCACGTATTATTGAAAGCTACACTGCTGTATCTGATTGGAAGTCCCTAGAATCCTGGTTATCAGATTTGCAGCAACTGCGTTCTAGACA TGCTGGAAAGAGTTATTCTGGTGCTCTAACTACTGCAGGAAATGAAATCAATGCAATTCATGCCTTGGCATGTTTTGATGAGGGAGATTGTCAGGCAGCT TGGTCATATCTGGATTTGACACCTAAAAGTAGCAGCGAACTTACACTTGATCCTAAACTGGCCTTGCAAAGGAGTGAGCAAATGCTTTTACAGGCAATGC TGTTTCTCCATGAGGGGAAGGTAGAAAAGGTACCACAGGAAACATGGAAGGCCAAGTTAATGCTGGAGGAAATGTTGTCTGTTTTGCCACTTGATGGTCT GGCAGAGGCAGCACCATTTGCTACTCAGTTGCACTGCATCTTTGTGGTTGAAGGAGGTCACAATCTTAAGGACAACCATGCAAAATCCAAGGAACATCAC TCAATATTAAGCTCATATGTCGAGTCGATTCAGTCTTTAATAAACAGAGTTCATCAGGATTGTAATCCATGGTTAAAACTCCTCCGGATTTATCGAACCA ACTGTCCTACTTCTCCAGTCACTCTAAAGCTGTCTATGAGTTTGACAAGTTTGGCCCGTAAGCAGGGAAACCTTATGTTAGCAACCCGTCTAAATAATTA TCTCAGGGAGCATGCATTGAATTGCTCCGAGGAGAGAAACTCTTCTTTCCTATTGTCAAAGTTGCAATATGAGGACTTCATGCTCCTGCATGCTCAAAAC AAGTTTGAAGATGCTTTTGCAAATCTTTGGTCTTTCGTGCGCCCTTGCATGCTGTCTTCTGCATCTATGGTTTCTAATTCATATAATAATATTTTGAAGG CTAAGGCTTGCTTGAAACTTTCAGAGTGGTTGAGGCAGGATTATCCAGATTTGAGTTTGGAAAGTATCGTTCTCAATATACTGACAGATTTTAATATGGA TGATGCAGCTTCACCTGACAGAGTTGGACACTCTGTCAATGTCCAGAATTTCAACTCCAAACCTAGTCTGGTTGTGAACATTGAGGAAATCGTGGGCACA GCTACAAAGTTATCCACGCAACTTTGCTCCACAATGGGCAAGGCATGGATTTCTTATGCCACTTGGTGTTTCACTCAGGCTAGAGATTCTCTCTTTAATC CATCTGAAACTGTTCTTCGCTCATGCTCTTTCTCCCCTGTACTTATTCCAGAAGTCCAGCCTGACAGATTCAATTTAACTGAAGTTGAGAGGACAAGAGT GCAATCTGTGGTCTTCTGGCTTTTTCAGCACAAGGGTGACGATTCTAGTGACTGCAGAGAGGGGATTTTTTGGCCTGATTCTGTGCAAAATTTAATAAAT GATAAACCAGTGGTGGAGCAAGTAATCGATTTAATTGAAGCTGCAGCTGGTGCACAGGGTGCAGAAAACTCTAGTGGCGATTCCCTTTCTTTTACTCTTG CATCTCAACTGCGAAATTTTTTCCTTTGTGTAAATGCCGGCTTAGGAGAAGCCAACATATCATCTGCAGTTAATGATTTAGTTAGTGTATGGTGGTCTTT GAGAAGGAGGCGAGTTTCTCTCTTCGGTCATGCAGCCCATGGTTTCATGCAATACCTGACATACTCAACTATAAAGGTTTCTGATTCTCAGTTAGCTGGC TTTGAGGGCGAGTCTTTAAAACAAAAAACTGGGAGTTATACTCTGAGGGCTACCTTGTATTTGCTACATATCCTACTCAATTTTGGAGTTGAGTTGAGAG ATGCAATTGAACCAGCTCTTTCATCAATTCCTTTATTGCCATGGCAGGAAGTAACTCCCCAATTGTTTGCTCGTTTAAGTTCTCATCCTGAGCAAGTGGT CCGGAAGCAATTGGAGGGTTTATTGATGATGTTGGCTAAGCTATCTCCTTGGTCCATAGTGTATCCGACTCTGGTTGATGTGAATACTAATGAGGAGCCT TCAGAGGAGCTTCAACACATTCTGGGTTGTTTGAGAGAGCTTTACCCAAAATTAATTCAAGATGTTCAACTCATGATAAATGAGCTTGAAAATGTAACTG TTCTTTGGGAGGAACTATGGCTCAGCACACTTCAAGATCTGCATGCAGATGTGATGAGACGCATAAATGTGCTGAAAGAGGAAGTTGCGCGAATAGCAGA GAATGCAACTCTAAGTCAAAGTGAGAAGAACAAAATTAATGCTGCTAAATACTCAGCCATGATGGCCCCCATTGTTGTGGCCTTGGAACGCCGCCTTGCT TCTACTTCTCGGAAACCAGAGACACCTCATGAATTATGGTTCCATAAGGAGTATAGAGAACATCTGAAATCAGCCATTCTGTCATTTAAGACTCCACCGG CTTCTGCTGGTGCACTAGGAGAAGTGTGGCGGCCATTTGATGATATTGCTGCTTCCTTGGCATCTTATCAAAGAAAGTCGTCAATATCTCTAGGTGAAGT TGCACCCCAACTGGCTTTGTTGTCATCGTCTGATGTCCCAATGCCTGGTCTTGAGAAGCAAGTCACAGTATCTGAGTCTGACAGAAGTTCCACTACAAGT CTCCAGGGAATTGTCACAATCACTTCTTTCTCTGAACAACTGACTATCTTGTCAACCAAAACAAAACCTAAGAAACTTGCTATACTTGGTTCAGATGGTC GAAAGTACACTTATCTTTTGAAAGGGCGAGAAGATTTACGTCTTGATGCAAGAATCATGCAGCTTCTGCAGGCTATAAATGGTTTTCTGCGTTCATCTTC TGCAACTTCTAGGCATTTGCTTGATGTACGGTACTATTCAGTGACTCCAATCAGTGGCAGGGCTGGTCTTATTCAGTGGGTGGACAATGTGGTGAGCATA TATAGTGTCTTTAAGTCTTGGCAAAACCGCGTGCAGCTGGCACAGCTCTCATCAATGGCTCCAGCCAATTCAAAAAATCCTGTTCCTCCACCTGTTCCCC GACCAAGCGATATGTTCTATGGTAAAATCATACCTGCACTTAAAGAGAAAGGCATTAGGAGAGTCATTTCACGAAGAGACTGGCCCCATGATGTCAAACG TAAGGTTCTACTTGACTTAATAAAGGAGGTTCCAAGACAGCTGCTTCATCAAGAACTTTGGTGTGCCAGTGAAGGGTTCAAAGCCTTCAGCTCAAAATTG AGGAGGTACTCTGGAAGTGTTGCGGCCATGAGTATGGTGGGCCACATTCTGGGTCTTGGAGATAGACATCTGGATAATATTCTCGTAGATTTTTGTAGTG GGGATATTGTGCACATTGATTATAATGTTTGCTTTGATAAAGGGCAAAGATTAAAGGTGCCAGAGATTGTTCCATTCCGCCTTACCCAGATGCTTGAAGC TGCTTTGGGATTGACTGGAGTGGAAGGTACCTTCAGAGCAAATTGTGAAGCAGTTGTTGGTGTACTGAGGAAAAACAAGGATATACTCTTGATGTTGTTA GAGGTTTTTGTTTGGGATCCCCTTGTAGAATGGACGCGAGGTGATTTTCATGATGAAGCAGCTATTGGGGGTGAAGAAAGAAAGGGCATGGAGTTGGCGG TTAGCTTGAGTTTGTTTGCATCTCGAGTGCAAGAAATCCGTGTTCCGCTGCAGGAGCATCATGATATTTTATTGGCTACCTTACCAGCTGTTGATTCTGC TCTTGAGGGGTTTGCTGATGTTCTAAATCAGTATGAGCTTGCCTCTACTCTGTTTTATCGAGCTGATCAAGAAAGGTCTAGTCTCATTTTGCATGAGACA TCTGCAAAGTCGATTGTTGCTGAAGCAACTAGTAATTTGGAGAAAACCCGTGCATCATTTGAAATTCAGGTTCGAGAATTCACTCAAGCAACAGGTGTAA TATCTGAGAAGGCTCAAGAAGCTGTAACATGGATGGAGCAACATGGAAGGGTCCTCGAAGCTTTGCGGAGCAATTTGCTTCCAGAAATAAATTCCTGCAT AAAGCTGAGCAGTATGGCTGATGCTCTGTCGCTTACATCTGCAGTCCTGGTGGCTGGAATTCCACTGACCATTGTTCCTGAGCCCACTCAAGCACAATGC GAGGATATGGACAGGGAAGTTTCTCAGCTCATAGCTGAGCTGGATCATGGACTCTCATCTGCTCTAACTGGAATCCAAGCATATTCATTGGCTTTGCAAA GAATCCTACCTCTGAATTATGTTTCAACTAGTACAGTACATGGCTGGGTTCAAGTGTTGCAGCTGTCTTCTAATGCCCTTTCCTCTGATTTACTCTCTCT TGCCAAAAGTCAGGCTGCTGAACTCGTTGCTAAAGTACATGCAGATGATCTTGATTCTGTTAAACACATTCATGATGATATTTGTCTAAAGGTAGATAAA TACGCTACAGAGATTAATAAAGTTGAAGAAGAGTGTGCTGAGTTAGTGAACTCTATTGGCTCAGAGACTGAATCAAAAGCTAAGGATCGTCTTCTGTCTG CTTTTATGAAATACATGCAGTCTGCTGGTTTGGTGAGGAAAGAAGACACTAATTCTTCTAGTCAACCAGGACAATTGAAATACGATGCAACTAGGGATGC CAGGTTACCAGTGGACCTGGAAGACAAGAAGGAGAAGGTATTATCTGTTCTAAATATAGCTGTAAGGTCCTTGTATAATGAAGTAAGGCATAGGGTACTA GACATATTCAGTAATTTTGGAGGAGGAAGGCATGCAAATGACAGATTTAGATCTAACTTCTGCGAGTTTGAAGAACAGGTAGAGAAATGTGTACTTGTAG CTGGATTTGTTAGTGAATTACAGCACTTTATTGGTAGGGACATACATAGTGTGAATGCAGATGTATACCATGCAAAATTTTATTCTGAAAGAAACTGGGC ATCCACATTCAAATCCACTTTACTTTCCTGCAAGATCTTGGTTGGGAAAATGACTGAAGGTGCTTTATTGGATGTCATGAGATCTGCTGTTTCATTGAAT TCAGAAGTTATGGATGCATTTGGGTTTATCTCTCAAATCCGAGGATCCATTGATACAGCATTGGAGCAATTCTTGGAAGTTGAATTAGAAAGGGCATCCT TGGTTGAACTAGAAAAGAACTACTTTGTTAAGGTTGGCCTTATTACTGAGCAGCGGTTGGCTCTTGAGGAAGCTGCTATGAAAGGCAGAGATCATCTGTC TTGGGAAGAGGCAGAGGAGCTCGCCTCCCAGGAAGAAGCTTGTAGGGCACAGCTGGACCAGCTCCATCAAGCATGGAACCAGAGGGAGATGCGTGCTACT TCCCTTGTAAAGAGAGAAGCTGATATAAAAAATGTCTTGGTTTCTTCTGAATGCCAATTTCAATCTATACTTGGTGCTGAAGAGGTAAGGGAACCGCAAG TGTTTGGAAGCAAAGCTCTTCTGTCCACACTAATAAAACCCTTCTCTGATTTGGAATCAATTGATAAAGTGTTGTCCTCTGGTGGTTCTGCTGCTTCTCC CTCAAATGAATTTGTTAACTTGGCAGATTTGATGAGTTCTGGGCACTCAATATCTGAATACATCTGGAAGTTCGGTGGCTTACTGAAGAGCCACATATTT TTCATTTGGAAAGTTTGCATGGTTGATTCTTTTCTTGATTCATGCATACATGATGTTGCTTCATTTGTGGATCAAAATTTAGGATTCGACCAGCTTTTCA ACATTGTAAAGAGAAAGCTTGAAATCCAGCTTCGTGAACATGTTGGTTGCTACCTGAAGGAACGAGTTGCTCCTGCTTTCTTATCTTGGTTAGATAAAGA GAATGAGCAATTGTCAGAAGCAACAAAGGATCTTTCTCTTGACCAAGTGAAAAAGGATATCGGCGCCATCAGGAAGGTGCAGCTCATGCTTGAGGAATAC TGCAATGCTCATGAGACTGCTAGAGCAGCAAGATCAGCAGCTTCTGTCATGAAAAGACAGGTAAATGAACTCAAAGAGGCTCTTCACAAGACTAGCCTAG AAATTGTCCAGTTGGAATGGATGTATGATGGGTTGACCCCTTCACATAAGAGCAGAGTCACATTTCAAAAGTTCCTTTCCAATGAAGATAACTTATATCC CATTATCCTAAACCTCAGCAGACCTAATCTGCTGGAAGGGTTGCAATCAGCCATAACAAAAATGGCTAGGTCAATGGACTGCCTGCAAGCTTGTGAACGA AATTCTGTTGTGGCAGAAGGGCAGCTTGAGAGAGCAATGGGATGGGCTTGTGGTGGACCAAATTCCAGTACAACTGGAAATACTTCAACCAAAACTTCAG GAATTCCTCCTGAATTCCATGACCATCTAATGAGGCGACAGCAATTGCTGTGGGAAGCTAGAGAAAAGGCATCAAATATTCTTAAAATTTGCATGTCTAT ATTGGAGTTTGAAGCATCAAGAGATGGGATTTTTCAGATACCAGGAGAGGTTTATCCAGCAAGAAGTGTTGCTGATGGCAGGACATGGCAGCAAGCTTAC TTGAATGCACTAATAAAGTTGGAGGTTTCCTATCATTCTTTTACTCGCACCGAACAAGAGTGGAAGCTTGCACAAAGCAGTATGGAAGCTGCTTCCAATG GCTTGTATGCAGTTGCTAATGAACTCTGCAATGCATCTCTTAAAGCAAAGTCAGCTTCAGGTGATTTACAAAACATTGTTCTTGCAATGAGGGACTGTGC ATATGAAGTCAGTGTGGCACTATCTGCCTTTAGTCGCATCACAAAGGGCCATACAGCCTTGACTTCTGAATCTGGTAGCATGCTTGAAGAGGTTCTGGCC ATAACTGAAGATCTGCATGATGTTCATACTCTGGGAAAGGAGGCTGTTGCATTCCACTGTTCTCTCATGGAAGATCTATCTAAGGCAAATGCAATTCTTC TTCCACTTGAATCTTTATTGTCGAATGATGTGACTGCTATGACAGATGCTATGACCAGGGAAAGAGAGACCAAGATGGAAGTATCTCCTATTCATGGTCA AGCCATTTACCAGTCTTACTGCTTGAGAATTAAAGAGGCTATCCAGACATTTAACCCCTTGGTACCTTCACTTGCATCATCTGCGAAGGGACTGCATTTG ATGCTGACAAGGCTTGCACAAACTGCTAGTCTCCATGCTGGCAATCTTCATAAAGCTCTTGAAGGGTTAGCAGAAAGCCAGGATGTCAAGTCACAGGGAA TTAGTTTGTCTGGGACAGATCTTGACAATGGTGCTAATGCATTCGATGACAAGGGAAGAGAGAGCTTCTCTATTTCAGACAATGGGAGTGCTAAAGATCT CATTAATGATAGTGGACTTTCCTTGCAAGATAAAGGATGGATATCCCCACCAGATAGCATATACAGCAGCAGCTCAGAATCTGGCATTACCTCAGCCGAA GCAAGTTTTCCAGACAGCTTACATGATCCAGAAGAACTAATAAGACAATCCCCTTGTGGATCTGGTACCAGGGTCGCGACTTATCATCTAAATTCTGCAC CATCTTCTCAAACTGGTTGCCAGAAAATCTCAGACCCTGGTCAATCAGGATTTAATAGTAACAATGATTCTGTCACAGGAATTGGTGAGCTAACTGAACA TCTGAAATCTGTGGCACCACCAAGTGATGAAGCTGTAAATGTCCCTGTCGAGCCTTCACAACCTTTGGATGATGAGAGCTCAAAGGAGAAATTTGAGGGC AAAAATGATGAGGTATCCTCATTAAACAAAGTTAAAATTGAAGATGAAAATCAAGAATCTCCTCATCCTAATCTGCAGACCGGCAGTCGAGTGGCCAAGG GTAAAAATGCTTATGCTTTGTCAGTGCTAAGGAGGATTGAGATGAAAATAGATGGTGAAGATATTGCGAACAACAGAGAAATTAGTATTGAAGAGCAAGT GGATCATCTGCTGAAGCAAGCAATGAGTGTAGATAATCTTTGCAACATGTATGAGGGTTGGACACCATGGATTTGA
AA sequence Show only first row Show all	>Potri.004G147800.1 pacid=42794838 polypeptide=Potri.004G147800.1.p locus=Potri.004G147800 ID=Potri.004G147800.1.v4.1 annot-version=v4.1 MMQGLHQQQQLAALLSAALPKDSPSPSPSTAITTTTTITPASTTAKSTNSENTDDDDAARLGAINSLHRAIVYPPNSLLVSHSASFLSQGFSQLLTDKSY AIRQSAATAYGALCAVICAILIGSNGRQNHVMLGSIVDRFIGWALPLLSNGGGGDGTTELALEGLREFLSVGDVVGIERYALPILKACQELLEDERTSLN LLHRLLGVLTLVSIKFSRFFQPHFLDIVDLLLGWVLVPDLAESDRRVIMDSFLQFQKHWVGNLQFSLGLLSKFLGDMDVLVQDGSRGTPAQFRRLLALLS CFTTVLQSTASGLLEMNLLEQISESLRALVPQLLGCLSMVGRKFGWAKWTGDLWKCLTLLAEILCEKFSTFYPLALDILFQSLDSQPGAEKITSFQVHGV LKTNLQLLSLQKLGLFPSSAQKVLQFDALISQLRLHPSHLVTGSSAATYIFLLQHGNNEVVQQAIGVLIKEMELLKAMLNETLNLGDENYSVKDSKSYSK MEFLALMKFDLKVLLTCVSLGGGSSLICQPELATIYLKRSDMLASFIVEKLDPFNLPIQAYVELQVNVIQTMERLTAVEFLSRWSIRNQTTQTASLDDTV YKVNNVNGFRDDISAVIIEHLRKYSAFLIKAINVSAPLTVKVVALEWIQKFSNNLIAIYENSNVNTYFDEAFGYIGGTGSIIFSVFDAAFDSEPKVRLQV ASVLEALLQARLVHPIHFYPMAEVVLEKLGDPDVDIKNSFVRLLSHVLPMTMFAFGLHDQGTSSTYRSNAIVSFNSSNLNWKQVFSLKQLRQQLHSQQLV SILSYISQRWKVPLSSWIQRLIHSCRSSNDLVLGQLEETRTFVADVLWLNKKLDDDILERICSVDNLAGAWWAIHEAARYCIATRLRTNLGGPTQTFAAL ERMLLDIAHVLQLDIEQNDGNLSIIGSSGAHLLPMRLLLDFVEALKKNVYNAYEGSAILPSASRPSSLFFRANKKVCEEWFSRICEPMMNAGLALQCHDA TIHYCTVRLQELKSVLSSSLKDKSRAQASENLHSIRDRLFGDILRVLQHIALALCRSHEPKALIGLHQWASMTFSSLLMDENQSPSHNGISGPFAWITGL AYQAEGQYEKAAAHFTHLLQNEESLSSMGSDGVQFAISRIIESYTAVSDWKSLESWLSDLQQLRSRHAGKSYSGALTTAGNEINAIHALACFDEGDCQAA WSYLDLTPKSSSELTLDPKLALQRSEQMLLQAMLFLHEGKVEKVPQETWKAKLMLEEMLSVLPLDGLAEAAPFATQLHCIFVVEGGHNLKDNHAKSKEHH SILSSYVESIQSLINRVHQDCNPWLKLLRIYRTNCPTSPVTLKLSMSLTSLARKQGNLMLATRLNNYLREHALNCSEERNSSFLLSKLQYEDFMLLHAQN KFEDAFANLWSFVRPCMLSSASMVSNSYNNILKAKACLKLSEWLRQDYPDLSLESIVLNILTDFNMDDAASPDRVGHSVNVQNFNSKPSLVVNIEEIVGT ATKLSTQLCSTMGKAWISYATWCFTQARDSLFNPSETVLRSCSFSPVLIPEVQPDRFNLTEVERTRVQSVVFWLFQHKGDDSSDCREGIFWPDSVQNLIN DKPVVEQVIDLIEAAAGAQGAENSSGDSLSFTLASQLRNFFLCVNAGLGEANISSAVNDLVSVWWSLRRRRVSLFGHAAHGFMQYLTYSTIKVSDSQLAG FEGESLKQKTGSYTLRATLYLLHILLNFGVELRDAIEPALSSIPLLPWQEVTPQLFARLSSHPEQVVRKQLEGLLMMLAKLSPWSIVYPTLVDVNTNEEP SEELQHILGCLRELYPKLIQDVQLMINELENVTVLWEELWLSTLQDLHADVMRRINVLKEEVARIAENATLSQSEKNKINAAKYSAMMAPIVVALERRLA STSRKPETPHELWFHKEYREHLKSAILSFKTPPASAGALGEVWRPFDDIAASLASYQRKSSISLGEVAPQLALLSSSDVPMPGLEKQVTVSESDRSSTTS LQGIVTITSFSEQLTILSTKTKPKKLAILGSDGRKYTYLLKGREDLRLDARIMQLLQAINGFLRSSSATSRHLLDVRYYSVTPISGRAGLIQWVDNVVSI YSVFKSWQNRVQLAQLSSMAPANSKNPVPPPVPRPSDMFYGKIIPALKEKGIRRVISRRDWPHDVKRKVLLDLIKEVPRQLLHQELWCASEGFKAFSSKL RRYSGSVAAMSMVGHILGLGDRHLDNILVDFCSGDIVHIDYNVCFDKGQRLKVPEIVPFRLTQMLEAALGLTGVEGTFRANCEAVVGVLRKNKDILLMLL EVFVWDPLVEWTRGDFHDEAAIGGEERKGMELAVSLSLFASRVQEIRVPLQEHHDILLATLPAVDSALEGFADVLNQYELASTLFYRADQERSSLILHET SAKSIVAEATSNLEKTRASFEIQVREFTQATGVISEKAQEAVTWMEQHGRVLEALRSNLLPEINSCIKLSSMADALSLTSAVLVAGIPLTIVPEPTQAQC EDMDREVSQLIAELDHGLSSALTGIQAYSLALQRILPLNYVSTSTVHGWVQVLQLSSNALSSDLLSLAKSQAAELVAKVHADDLDSVKHIHDDICLKVDK YATEINKVEEECAELVNSIGSETESKAKDRLLSAFMKYMQSAGLVRKEDTNSSSQPGQLKYDATRDARLPVDLEDKKEKVLSVLNIAVRSLYNEVRHRVL DIFSNFGGGRHANDRFRSNFCEFEEQVEKCVLVAGFVSELQHFIGRDIHSVNADVYHAKFYSERNWASTFKSTLLSCKILVGKMTEGALLDVMRSAVSLN SEVMDAFGFISQIRGSIDTALEQFLEVELERASLVELEKNYFVKVGLITEQRLALEEAAMKGRDHLSWEEAEELASQEEACRAQLDQLHQAWNQREMRAT SLVKREADIKNVLVSSECQFQSILGAEEVREPQVFGSKALLSTLIKPFSDLESIDKVLSSGGSAASPSNEFVNLADLMSSGHSISEYIWKFGGLLKSHIF FIWKVCMVDSFLDSCIHDVASFVDQNLGFDQLFNIVKRKLEIQLREHVGCYLKERVAPAFLSWLDKENEQLSEATKDLSLDQVKKDIGAIRKVQLMLEEY CNAHETARAARSAASVMKRQVNELKEALHKTSLEIVQLEWMYDGLTPSHKSRVTFQKFLSNEDNLYPIILNLSRPNLLEGLQSAITKMARSMDCLQACER NSVVAEGQLERAMGWACGGPNSSTTGNTSTKTSGIPPEFHDHLMRRQQLLWEAREKASNILKICMSILEFEASRDGIFQIPGEVYPARSVADGRTWQQAY LNALIKLEVSYHSFTRTEQEWKLAQSSMEAASNGLYAVANELCNASLKAKSASGDLQNIVLAMRDCAYEVSVALSAFSRITKGHTALTSESGSMLEEVLA ITEDLHDVHTLGKEAVAFHCSLMEDLSKANAILLPLESLLSNDVTAMTDAMTRERETKMEVSPIHGQAIYQSYCLRIKEAIQTFNPLVPSLASSAKGLHL MLTRLAQTASLHAGNLHKALEGLAESQDVKSQGISLSGTDLDNGANAFDDKGRESFSISDNGSAKDLINDSGLSLQDKGWISPPDSIYSSSSESGITSAE ASFPDSLHDPEELIRQSPCGSGTRVATYHLNSAPSSQTGCQKISDPGQSGFNSNNDSVTGIGELTEHLKSVAPPSDEAVNVPVEPSQPLDDESSKEKFEG KNDEVSSLNKVKIEDENQESPHPNLQTGSRVAKGKNAYALSVLRRIEMKIDGEDIANNREISIEEQVDHLLKQAMSVDNLCNMYEGWTPWI

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT1G50030		TOR	target of rapamycin (.1.2)		Potri.004G147800 [exp]	0	1
AT3G19190		ATATG2	autophagy 2 (.1)		Potri.009G102900 [exp]	2.00	0.9054
AT4G00450		CCT, CRP	CRYPTIC PRECOCIOUS, CENTER CIT...		Potri.002G159900 [exp]	2.00	0.9242	Pt-CRP.3
AT5G01400		ESP4	ENHANCED SILENCING PHENOTYPE 4...		Potri.016G116600 [exp]	2.44	0.9099
AT1G09730			Cysteine proteinases superfami...		Potri.017G044000 [exp]	4.24	0.8953
AT2G15900			Phox-associated domain;Phox-li...		Potri.009G108300 [exp]	4.89	0.8813
AT4G39420			unknown protein		Potri.007G078650 [exp]	5.65	0.8865
AT2G17930			Phosphatidylinositol 3- and 4-...		Potri.005G114300 [exp]	7.48	0.8889
					Potri.013G071800 [exp]	7.74	0.8782
AT4G04790			Tetratricopeptide repeat (TPR)...		Potri.011G133100 [exp]	8.00	0.8767
AT4G23000			Calcineurin-like metallo-phosp...		Potri.014G034400 [exp]	8.12	0.8353

Compare expression of checked genes

Potri.004G147800 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.