Potri.004G185700 [POPLAR]

| External link |
|
||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Symbol | |||||||||||||||||||||
|
Arabidopsis homologues
|
| ||||||||||||||||||||
|
Paralogs
|
|
||||||||||||||||||||
|
Flax homologues |
|
||||||||||||||||||||
| PFAM info |
| ||||||||||||||||||||
|
Representative CDS sequence |
>Potri.004G185700.1 pacid=42793807 polypeptide=Potri.004G185700.1.p locus=Potri.004G185700 ID=Potri.004G185700.1.v4.1 annot-version=v4.1
ATGAACGGCGAGAGCCGGAGATGGGACCGCAAGGACCTACGGCGGAGCTCGAAGAAGCAAAAGCTGATGCGCACCGCCGAAGAAGAGTTGGAGTCCAAGC
TCGGCTTTGATCTCTTCACCGAAGGTGATAAACGTCTCGGTTGGCTCCTCACTTTCTCTTCCTCTTCTTTGGATGATGAGGAGACCGGTAGAGTCTATAG
TTGCGTCGATCTCTACTTCGTTTCTCAGGATGGTTCGGCTTTCAAGTCGAAGTACAAGTTCCGTCCTTACTTCTATGCGGCTACGAAGGAGAAAATGGAA
ATGGACGTGGAGGGCTATTTGCGACGGCGATATGAAAGTCAAATTGCTTATATTGAGATTGTAGAGAAGGAGGATTTAGATCTTAAAAACCATTTGTCTG
GTTTACACAAATCATATTTAAAAATATCTTTTGCTACCGTACAACAATTAATGGATGTCAAGAGAGATCTGTTGCATGTTGTTGAAAGAAATCAGGCAAA
GTCTGATGCAGCAGAAGCATACGAGTCCATATTAACAGGAAAAAGGGAACAAAGACCTCAGGATTTTCTTGATTGCATCATTGACCTTCGGGAGTATGAT
GTCCCATACCATGTTCGCTTTGCCATTGATAATGATATACGTTGTGGCCAGTGGTATGATGTTAGTGTCTCTAGTACTGGTGTCAAGCTTGAGAAGAGGA
CGGATCTTCTGCAACGTGCTGAGGTTCATGTTTGCGCATTTGATATTGAAACAACCAAGCTTCCTTTGAAATTTCCAGATGCTGACTATGATTTGATAAT
GATGATATCATACATGGTTGATGGACAAGGTTATCTGATTACCAACAGAGAGTGCGTGGGGGAAGATATAGAGGATTTAGAATATACACCAAAACCCGAA
TATGAAGGCTGTTTCAAAGTGACAAATGTGAAAAATGAGGTTGAGCTTCTTAAACAGTGGTTTGCCCACATGCGAGAGGTGAAGCCTGGTATTTATGTTA
CATACAATGGGGATTATTTTGACTGGCCCTTCCTGGAAAGCAGAGCAGCTTATCACGGGTTCAAGATGGGTGATGAGGTTGGATTCTCATGTGACAAGAA
TCAAGGGGAGTGCCGTGCTAAATTTGCTTGCCATTTGGATTGTTTTGCTTGGGTCAAACGTGATAGTTATTTGCCTCAGGGAAGCCAAGGCCTTAAGGCG
GTTACGAAGGCAAAGTTGGGTTATGATCCGCTTGAGGTGAATCCAGAGGACATGGTTCGCTTTGCTAAAGAAAAGCCTCAGATGATGGCCTCCTATTCGG
TTTCTGATGCTGTTGCAACTTATTATTTGTACATGACCTATGTGCATCCCTTCATTTTCTCTCTCGCAACCATAATTCCTATGTCACCAGATGAGGTCTT
ACGCAAAGGTAGTGGGACACTTTGTGAAATGCTTCTGATGGTGCAGGCATATATGGCAAATGTTATCTGCCCTAACAAGCACCAATCTGACCAAGATAAG
TTCTATAAGAGTCACCTTCTTGAGAGTGAGACGTATATAGGGGGTCATGTGGAGTGCCTTGAAAGTGGTGTTTTCAGATCTGATCTTCCAACCAGTTTTA
AGCTTGATCCTTCTGCCTATGAACTACTTATCAAAAACCTTGATCGAGATCTGCAATATGCTATAAGAGTAGAGGGTAAGATGGACCTGGATTTAATCTC
CAATTATGATGAAGTGAAGAATGTTATCATGGAAAAGCTTGTGTGTCTGAGAGATGAACCTGTTCGTGAAGAATGTCCACTTATTTATCATCTTGATGTG
GCTGCAATGTATCCAAACATTATCTTAACAAACAGGCTTCAGCCCCCATCTATAGTTACAGACGAGATCTGTACTGCTTGTGACTTCAACCGCCCAGACA
AAACTTGTCTACGGAAGCTTGAATGGGTTTGGCGTGGAGAGATATTTATGGCAAAGAAAAGTGACTATTATCATTTGAAGAAGCAAATTGAGTCCGAGTT
TGTTGATGGCACTGATGGTCAGTTTTCAAAATCTTTTCTTGATCTGTCCAAGATGGATCAACAATCAAAGCTGAAAGAGCGTCTTAAGAAATACTGTCAG
AAGGCATATAAACGGGTACTCGACAAACCTGTTACTGAAGTTCGAGAAGCTGGGATCTGCATGCGGGAAAACTCATTTTATGTAGACACTGTTCGTAGCT
TTCGAGATAGAAGGTATGAATATAAAGGGCTTAATAAGGTTTGGAAGGGGAAGCTGTCAGAAGCCAAGGCTAGTGGAAATTCTATTAAGATCCAAGAAGC
ACATGACATGGTTGTGCTTTATGATTCGTTGCAACTTGCTCACAAATGTATTCTGAATTCATTCTATGGATATGTCATGCGCAAGGGTGCAAGATGGTAT
TCAATGGAAATGGCTGGTGTAGTTACATATACAGGAGCAAAAATCATTCAGAATGCTCGTTTGCTTGTTGATAAAATTGGAAAGCCACTTGAATTGGACA
CAGATGGTATTTGGTGTGTCCTCCCTGGATGTTTTCCAGAGAACTTTACTTTTAAAACAAAGGACTCGAAGAAAAAGCTGACAATCTCGTATCCATGTGT
TATGCTCAATGTCGATGTGGCAAGAAACAACACAAATGAACAATACCAGACACTTGTAGACCCTGTAAATAAAACATATGCAACTCATAGTGAATGCTCA
ATTGAATTTGAAGTGGATGGCCCATACAAGGCAATGATTCTTCCTGCTTCCAAGGAAGAAGGAATTTTAATTAAGAAGCGATATGCTGTTTTCAATGATG
ATGGAACCCTTGCAGAGCTTAAAGGTTTTGAGATCAAGCGTAGAGGTGAGCTGAAGCTCATCAAAGTTTTCCAGGCTGAGCTTTTCGACAAGTTCCTCCA
TGGGTCAACCTTAGAGGAATGCTACTCAGCTGTAGCTGCTGTGGCAAACCGCTGGCTGGATCTTCTTGATAATCAAGGGAAGGATATTGCTGACAGTGAG
TTGCTTGATTACATATCTGAATCAAGCACAATGAGCAAGTCCTTGTCCGACTATGGTCAACAAAAGTCATGTGCAGTAACTACTGCTAGGCGTCTTGCTG
ATTTTCTTGGTGATACAATGGTTAAAGATAAAGGATTGCGTTGCCAGTATATAGTTGCATGTGAACCAAGGGGAACACCTGTTAGTGAGCGTGCTGTTCC
TGTTGCAATATTTGAAACTGATCCCGAAATAATGAAGTTCTATTTACGAAAATGGTGCAAGACTTCTTCAGATGTTGGTATCCGCTCCATCATTGACTGG
TCTTATTACAAGCAACGACTTGGTTCAGCAATTCAAAAAATTGTTACAATTCCTGCTGCAATGCAAAAGGTTGCGAACCCTGTTCCTAGGGTAGTTCATC
CTGATTGGCTGCACAGAAAAGTTCGTGAGAAGGAGGACAAATTTCGTCAGCGGAAATTGGTTGATATCTTCAACTTACGCAGCAGGGATGATCTCTCCAG
AAAGATGGATGATGCCACCATCAAAAATCATGATGAGGCGAATGTTAAAGATTTGGAAGACTTCCAAATCAAAAGCAGTTCTATAAATAGGCCTAGACCA
ATTGTTCGTTGTTATGATGTCAATGAAAAACGTTCAGCAAAGAAAACTGGCCAATTGAATTCTGCAGAACAGCAAACTGATAGTGTGCATGAATTGTCTT
CACAGCCGCAACACAATACTTCCTATGCTGAAAATATTGACAGAAATGTAGATTATCAAGGATGGCTTGAATTAAAGAAGAGAAAATGGAAAGATATTTT
AGACAGGAGGAAGAAACAAAGGTTGAGCAATACAAGGACTTCACACCATATTACTGATGCATCTGAACTGCTGGGTGGTCTAACCAATCATAAAGGAGCT
CAGCGCAGAACTGGAGTTGGTTCATATTTTACTACACATGAAGTAGCCCTAACACGATGCCACTGGCAGATAATACAGCTACTTCCAAGTTCACGTTGTG
GCCAATTTTTTGCATGGGTTGTTGTGGAGGGAATCATGCTTAAGATTCCTATAACTATTCCACGAGCATTTTACCTCAACGCTAAAGCACCCGCGATGGA
AAATTTTCCTGGTAGGCGTGTCACCAAGACGCTTCCTCATGGAAGGCCGAGCTATAACCTAGTTGAGGTCATTATAGATGAAGACAAGTTTAGGAAGGAA
AGCAAGAAACTAGCAGCTCTTCTTGCAGACCCAGAAGTTGAGGGGATATATGAATCAAAGGTGCCATTGGAGTTTAATGCGGTAATCCAAATTGGTTGTG
TCTGTAAAGTGGATAAAACTGCTAAAAAACGAAATGCCCAGGATGGCTGGAGTCTGAGTGAGCTGCATATGAAGACTACAACAGAATGTTCCTATTTGGA
GCAATCAATATCTTTCTTTTACATATATCATAGCATCTCTGAAGGACGTGCTATATATGTCATTTATTTGCCTGCATTGGGGACGGTATCTGTTGTGGTT
GTTAATCCTTACCAAAATAAGGATATAACACCATCTTTTCTTGAAAGACAATTCCGGGAAGCTTGCCAAGCATTGTCAATTGAAGCAATACCTCCTAGGA
ATAGTATTGTTTTCAAGGTGGACTATGTTGGACATGTCAAGGATGCTGAAAAGATTTTACAAGGAACAATTAGCGAACTCAGAGACAAGCATCATGGACC
TACACTTGCTGTCATTGAATGCCCAAATGCACACTTGATGAAGTCAGGTGTACCAGCTCTTGATGATTTCCCTTGTGTGAGCATACCTTCGAATGCTCGT
GATAGTCAGTATCAGGTACTTGGGTGGCAACAAGCATCTGCAAAAATTGGCATGCAACGTTCTGCTGCATCATCTCAGTGGTTGAATGAAAGAATTTCTC
TCTCAAGATATGCCCATGTACCCTTGGGAAATTTTGAACTTGACTGGCTTATATTCACGGCAGATGTCTTCTTTTCGAGAGCATTACATGATCAACAACA
GGTGCTTTGGATATCTGATGATGGTGTTCCAGATTTAGGAGGTAATCATGAAGAATCTACATGTTTTGCTGATGAGGTCCAACAACCTGTTCTAACATAC
CCTGGAGCATATAGGAAAGTTTCTGTCGAATTAAAGATACATCACCTGGCTGTAGATGCTCTTCTGAAAAGTAACCAAATAAATGAAATGGAAGGAGGTG
CTTTGTTAGGATTCGACCAGGACATGAATTCCAGTACAACTCTATATGATCAGAGTGGCTTTGACGAGGCTACCTCATCTGCATCTGGATTGCGTGTCCT
GAAACAGCTGATCCAGAGGTGCCTTGCAGATGCAGTTACATCAGGAAATGTTTTTGCTGATGCAATTTTACAACATCTGTATCGTTGGCTTTGCAGCCCT
CAATCAAAGCTTCATGATCCAGCTCTTCACCGTATACTCCACAAGGTCATGCAAAAGGTTTTTGCTTTGCTGTTGGCTGAATTACGCAAATTAGGTGCCA
CAATCATATTTGCCAATTTTTCGAAGGTTATCATAGACACAGGAAAATTCGAATTAACTGCTGCCAAAGCTTACTGTGACAGCGTGCTCAAAACTTTGCA
AAATAGAGAACTGTTCGAGTGGATTGAGCTTGAACCATTGCAGTTTTGGCATTCCTTGCTCTTTATGGATCAGTATAACTACGGTGGCATTCCAGCCAGA
CCTGATGACAGTTCTCACAATGATTTGCATCATCACTCCCCAAGAGAAGAACCAAAAGTGGATATTGTGTCAAATTGGAATATTGCTGAATACCTGCCCA
AGAAAATCCAGGATCATTTCGTTTTAATTGTCTCAGAATTCATGTTTATTCCCTGGGACTATGCACAAAAGCAAGCTGCAACAAGAGAAGCTTTGCGCGA
TGGCAACTCATGTACTCCATCAATCACCATTGTAGCTGCTGAGAATTTTGAATCACACATGGTGGAATATATTAAAGGGCAGATCGGCACACACTTCACA
GACAAACTTCTAGGAATTGCTCGAGATACTGTTCTTCACATGAAGGGGATAAACAAATCTGAGAATGGCCAACAGATTTCACTCGGTATCCAGCAACCTG
CGGGCATGAACCACAAAGGGGATCCTGCACTGGAATTCATTAAGCATGTTTGTGCTGTCCTGGCTCTTGACCAGCACGTGCAGCATGAAGTTCTGGTGAT
GAGAAAGAATCTGTTAAAATATGTACGTGTTCGGGAGTTTGCTCCAGAAGCTGAGTTTCATGATCCCTGTCCTTCCTTTATCTTACCAAATGTAATTTGC
AGCTACTGCAATGACTGCAGAGACCTGGACTTGTGTCGTGACTCAGCTGTATTGGCAGAGGAGTGGCGTTGTGCCGTTCCACAGTGTGGCCAGCCTTATG
ACCGAGAAGTAATGGAGAATGCTCTTCTTCAAATTGTACGACAGAGGGAGCGTCTTTATCATTTGCAGGATCTGGTATGTCTTAGGTGCAATCAGGTCAA
AGCTGCTCATTTATCAGAACAGTGTGCATGTGCTGGATCGTATAGGTGCAGGGAAGATGTGTCTGAATTCCGCAGAAAAATGCAAATTTTCTTGAATGTA
GCCATTCGTCAGAAGTTTCAACTCCTCCAGGAGTGTACCTCTTGGATTTTAGAAGTCATCTTATAA
|
||||||||||||||||||||
|
AA sequence
|
>Potri.004G185700.1 pacid=42793807 polypeptide=Potri.004G185700.1.p locus=Potri.004G185700 ID=Potri.004G185700.1.v4.1 annot-version=v4.1
MNGESRRWDRKDLRRSSKKQKLMRTAEEELESKLGFDLFTEGDKRLGWLLTFSSSSLDDEETGRVYSCVDLYFVSQDGSAFKSKYKFRPYFYAATKEKME
MDVEGYLRRRYESQIAYIEIVEKEDLDLKNHLSGLHKSYLKISFATVQQLMDVKRDLLHVVERNQAKSDAAEAYESILTGKREQRPQDFLDCIIDLREYD
VPYHVRFAIDNDIRCGQWYDVSVSSTGVKLEKRTDLLQRAEVHVCAFDIETTKLPLKFPDADYDLIMMISYMVDGQGYLITNRECVGEDIEDLEYTPKPE
YEGCFKVTNVKNEVELLKQWFAHMREVKPGIYVTYNGDYFDWPFLESRAAYHGFKMGDEVGFSCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKA
VTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYMANVICPNKHQSDQDK
FYKSHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYELLIKNLDRDLQYAIRVEGKMDLDLISNYDEVKNVIMEKLVCLRDEPVREECPLIYHLDV
AAMYPNIILTNRLQPPSIVTDEICTACDFNRPDKTCLRKLEWVWRGEIFMAKKSDYYHLKKQIESEFVDGTDGQFSKSFLDLSKMDQQSKLKERLKKYCQ
KAYKRVLDKPVTEVREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAHDMVVLYDSLQLAHKCILNSFYGYVMRKGARWY
SMEMAGVVTYTGAKIIQNARLLVDKIGKPLELDTDGIWCVLPGCFPENFTFKTKDSKKKLTISYPCVMLNVDVARNNTNEQYQTLVDPVNKTYATHSECS
IEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTLEECYSAVAAVANRWLDLLDNQGKDIADSE
LLDYISESSTMSKSLSDYGQQKSCAVTTARRLADFLGDTMVKDKGLRCQYIVACEPRGTPVSERAVPVAIFETDPEIMKFYLRKWCKTSSDVGIRSIIDW
SYYKQRLGSAIQKIVTIPAAMQKVANPVPRVVHPDWLHRKVREKEDKFRQRKLVDIFNLRSRDDLSRKMDDATIKNHDEANVKDLEDFQIKSSSINRPRP
IVRCYDVNEKRSAKKTGQLNSAEQQTDSVHELSSQPQHNTSYAENIDRNVDYQGWLELKKRKWKDILDRRKKQRLSNTRTSHHITDASELLGGLTNHKGA
QRRTGVGSYFTTHEVALTRCHWQIIQLLPSSRCGQFFAWVVVEGIMLKIPITIPRAFYLNAKAPAMENFPGRRVTKTLPHGRPSYNLVEVIIDEDKFRKE
SKKLAALLADPEVEGIYESKVPLEFNAVIQIGCVCKVDKTAKKRNAQDGWSLSELHMKTTTECSYLEQSISFFYIYHSISEGRAIYVIYLPALGTVSVVV
VNPYQNKDITPSFLERQFREACQALSIEAIPPRNSIVFKVDYVGHVKDAEKILQGTISELRDKHHGPTLAVIECPNAHLMKSGVPALDDFPCVSIPSNAR
DSQYQVLGWQQASAKIGMQRSAASSQWLNERISLSRYAHVPLGNFELDWLIFTADVFFSRALHDQQQVLWISDDGVPDLGGNHEESTCFADEVQQPVLTY
PGAYRKVSVELKIHHLAVDALLKSNQINEMEGGALLGFDQDMNSSTTLYDQSGFDEATSSASGLRVLKQLIQRCLADAVTSGNVFADAILQHLYRWLCSP
QSKLHDPALHRILHKVMQKVFALLLAELRKLGATIIFANFSKVIIDTGKFELTAAKAYCDSVLKTLQNRELFEWIELEPLQFWHSLLFMDQYNYGGIPAR
PDDSSHNDLHHHSPREEPKVDIVSNWNIAEYLPKKIQDHFVLIVSEFMFIPWDYAQKQAATREALRDGNSCTPSITIVAAENFESHMVEYIKGQIGTHFT
DKLLGIARDTVLHMKGINKSENGQQISLGIQQPAGMNHKGDPALEFIKHVCAVLALDQHVQHEVLVMRKNLLKYVRVREFAPEAEFHDPCPSFILPNVIC
SYCNDCRDLDLCRDSAVLAEEWRCAVPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCLRCNQVKAAHLSEQCACAGSYRCREDVSEFRRKMQIFLNV
AIRQKFQLLQECTSWILEVIL
|
DESeq2's median of ratios [POPLAR]
Coexpressed genes
Potri.004G185700 coexpression network
*The number of genes in the network is adjusted within 50 genes.*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.