Potri.004G208400 [POPLAR]

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Arabidopsis homologues
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Paralogs
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Flax homologues |
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Representative CDS sequence |
>Potri.004G208400.1 pacid=42795326 polypeptide=Potri.004G208400.1.p locus=Potri.004G208400 ID=Potri.004G208400.1.v4.1 annot-version=v4.1
ATGTCTGCTTCGCAAACCCTTGGCGGTCCTTCTCGCTGCGGCCGTTCCTTAGGTCCTTCTCTCGACAAGATCGTTAAAAACGCCGCCTGGAGGAAGCACT
CTCACCTCGTTTCCTCCTGCAAATCGGTCCTCGACAAGCTCGAATCACTCACGGATTCTAATTCTCACTCTCCTCTCTTCGGGCTCTCCCCTTCGGATGC
CGAATTCGTTCTCCATCCAATTCTTCTCGCCTTAGATTCCGCTTACGTCAAGGTCGTGGACCCCGCACTCGAATGCTTGTTCAAATTGTTTTCCTCAGGC
CTGATTCGAGGTGAGATCGATAATGGTTCAAAAAATGTGATCATTTTTAAGATAATCGAGAGTGTTTGTAAGGTTTGTGGAATTGGTGACGAAGCTGTTG
AGCTTTCTGTGCTTAGAGTTTTGCTCTCTGCTGTTCGATCTCCTTGTGTTTTGATTCGCGGTGAATGTTTAGTGCACGTTGTTAGGACTTGTTATAATGT
TTATCTTGGTGGATTGACTGGGACCAATCAGATCTGTGCGAAATCTGTACTTGCACAGGTAATGCTCATTGTTTTTACTAGAGTTGAGGAGGATTCTATG
GATGTCAATGTTAAACCGGTTTCTGTTAGTGAAATGTTACTGTTTACTGATAAGAATTTGAATGAAGGGAGTTCTATTCATTTTTGTCAGAATTTTGTTA
ATGAGGTTATGACGGCAAGTGAAGGGGTTCCAGATGATAAGTTGTTGCTGTTGCATAGTCCGCCTTCTGATAAACTCCAAAATGGTAGTGGAGGTGCCGG
TGATGATAATGATAAAGTAGGTGAAGGGGATCATAAAAGTGAATTAAGGGATAAGGAAGCAAATGGTGAAGCTGAAACCGATGGTGGTGTGGGTGGTAGT
GGTGGTGTTGAAGCTGAGGGGAGTAAGATTAGGGAGGATGGGTTTCTTCTTTTTAGGAATTTGTGCAAATTGTCAATGAAGTTCTCATCGCAGGAGACCC
CAGATGATCAAATTCTTTTGAGAGGGAAGATTTTGTCTCTTGAGTTGCTTAAGGTGATCATTGACAATGGCGGTCCAATCTGGCGCACCGATGAAAGGTT
TCTCAACATTATCAAGCAATTCCTATGCTTGTCATTGATAAAGAACAGTACGTTGTCAGTTATGGCTATTTTCCAGCTTCAGTGTTCCATTTTTATGATG
CTGTTAGTGAAATTCAGATCTGGATTGAAGGAGGAAATTGGAATATTCTTTCCCATGCTTGTCCTTCGAGTGCTTGAGAATGTTAACCAGCCTAGCTTCT
TGCAGAAAATGACTGTCCTGAATCTTTTGGACAAGATCAGCCAAGATTCCCAGATCATTATTGATATTTTTGTAAACTATGACTGCGATGTGGATGCTCC
AAACATATATGAAAGGATTGTCAATGGCCTTCTGAAAACTGCTCTAGGACCCCCTCCTGGTTCAACAACAACTTTGTCTTCGGTTCAGGATATTACTTTT
AGGCATGAATCTGTGAAGTGCTTGGTTAGCATCATCAGGTCAATGGGTGCATGGATGGATCAACAGCTGAGAATTGGAGATTCCTACTTGCCTAAGATCT
CTCAAAGTTCCACTTCAACTGAGAATCATTCAACTCTGAATGGAGAAGATGCAAGTGCTCCTGAGTATGATTTGCATCCAGAAGTGAACTCTGAAACATC
TGATGCTGCTACCCTTGAACAACGTCGGGCATATAAAATTGAACTCCAGAAAGGTATCTCCATATTCAATAGGAAACCTTCCAAGGGCATTGAGTTTCTG
ATAAATGCCAAAAAAGTTGGTGGTTCTCCAGAAGAAGTTGCTGCCTTCCTGAAAAACACTACTGGCCTAAATGAAACAGTGATTGGTGACTATTTAGGTG
AAAGGGATGAGTTTTGTTTGAGAGTTATGCATGCTTATGTAGACTCATTTAACTTCAAGGTGATGGGTTTTGGTGAAGCGATAAGGTTTTTCTTACGGGG
CTTCAGGTTACCCGGAGAAGCACAGAAGATTGATCGTATCATGGAAAAGTTTGCTGAGCGCTATTGTAAATGCAATCCAAATTCATTTACCAGTGCAGAT
ACTGCTTACGTTCTTGCATACTCTGTGATAATGCTCAATACAGATGCTCATAACAGCATGGTGAAAGATAAGATGAGCAAGGCTGATTTTATTCGGAACA
ACCGAGGAATAGATGATGGCAAGGATTTGCCTGAAGAGTATCTGGGTGCTCTTTATGATCACATTGTGAAAAATGAAATTAAGATGAGTGCAAATTCTTC
TGTTCCTCAAAGCAAGCAGGGTAACAGCTTAAATAAGCTATTAGGTTTGGATGGTATACTCAATCTAGTTACTGGGAAGCAGACTGAGGAAAAGGCTTTG
GGTGCAAATGGGCTTCTTATCAGGCATATCCAAGAGCAGTTCAAGGCGAAGTCAGGAAAATCAGAGTCTATTTATCATGTTGTAACAGATGCAGCGATTC
TGAGGTTTATGGTTGAGGTCTGCTGGGGTCCTATGCTGGCTGCTTTTAGTGTGACTCTTGATCAGAGTGATGATAGGCTTGCTGCCTCTCAGTGCTTACA
GGGGTTTCGATATGCTGTGCATGTTACTGCAGTCATGGGTATGCAGACCCAGAGAGATGCTTTTGTTACATCCGTGGCCAAGTTTACATATCTGCACTGT
GCTGCAGATATGAAGCAAAGAAATGTAGATGCTGTGAAGGCAATAATATCAATTGCCATTGAAGATGGAAATAATCTTCAGGATGCTTGGGAGCATATCT
TAACTTGCCTCTCCCGTATTGAGCATCTGCAACTGCTTGGAGAAGGTGCACCGCCTGATGCCTCTTATTTGACACCATCTAATGGGGAAACAGAAGAAAA
GGCACTGAAGTCAATGGGTTATCCTTCTCTAAAGAAAAAGGGAACACTCCAGAATCCAGCTGTAATGGCTATTGTTAGAGGGGGTTCATATGATAGCACC
ACTGTTGGAGTCAATTCTCCAGGACTAGTAACTCCAGAGCAGATCAATAACTTCATTTCAAATTTGAATTTGCTTGACCAGATTGGGAATTTTGAATTGA
ACCATGTGTTTGCTAATAGCCAAAGGTTGAACAGTGAAGCAATAGTAGCTTTTGTGAAAGCTCTTTGTAAAGTTTCAATATCTGAGTTGCAGTCTCCAAC
AGATCCTCGTGTATTTAGCCTTACGAAAATCGTAGAAATTGCGCATTATAATATGAACCGCATCAGATTAGTTTGGTCCCGCATATGGAATGTTCTCTCT
GAATTTTTTGTATCAGTTGGCTTGTCAGAAAATCTTTCTGTTGCTATTTTTGTGATGGATTCTCTGAGACAACTTGCTATGAAATTCTTAGAGCGCGAGG
AGTTGGCAAATTACAACTTCCAGAATGAATTTTTGAGGCCATTTGTGATTGTGATGCAGAAAAGCAGCTCTACAGAGATCAGGGAATTAATAGTTAGGTG
TATTTCACAGATGGTCCTTAGTCGTGTCAGTAATGTGAAATCTGGTTGGAAAAGTGTTTTTATGGTTTTTACTGTTGCTGCAGCTGATGAGCGGAAGAAT
GTTGTCTTGTTGGCATTTGAGACCATGGAAAAAATTGTCCGAGAGTACTTTCCTTATATAACAGAGACGGAGACAACAACTTTCACTGACTGTGTTAGAT
GCCTCACCACCTTCACAAATAGCAGATTTAATAGTGATGTGAGCCTCAATGCAATTGCATTTCTCCGATTCTGTGCTCTGAAACTGGCAGATGGAGGACT
TATTTGCAACGTAAAGAGCAGTGTTGATGATCCATCCATCCCAATAGTAGATGAAGTTGCTTCGGATGTAAACCCCAGTGACAAAGATGTTCATGTGTCC
TTTTGGATTCCTTTGCTAACAGGGTTATCGAAACTTACATCTGATCCCAGATCAGCTATTCGAAAGAGTGCTTTAGAAGTGCTATTTAACATTCTCAATG
ACCATGGTCATCTATTCTCACACTCATTTTGGACCACTGTTTTCAACTCTGCCATTTTCCCCATCTTCAATAGCTTCAGTGACATGAAAGATGTTAAAGA
TCAGGATTCACCAACTTCAGCACCACCTCATTCAGTAGGAAGTGCATGGGATTCTGAAACTTCTACAATCGCAGTCCAGTGTCTAGTATACCTATTTGTC
AACTTTTTCAACGTTGTTAGGTCTCAACTACAGAGTGTAGTATCTATATTGATGGGATTTATTAGGAGTCCTGTTAAGGGTCCTGCTAGCGCTGGGGTTG
CTGCATTGTTGCGTTTAATAGGTGAACTGGGCAGCAGGATTTCAGAAGATGAATATAGAGAGATTTTTCTATCTTTGAAGGAGGCCGCTGCATCATTGTT
ACCAGGTTTTATGAAGGTCTTAAGAATCATGGATGGGATTGAGATGCCTGAAAGCTCTCACCCTTTTGCGGATGCGGATGTGTCTTCTGATCATGGCTTC
ACAAATGATGATCTTGAGGATGACAATCTCCAAACTGCAGCATATGTGGTTTCAAGAGTGAAGAGTCATATTGCTGTGCAGCTACTTATTGTGCAGGTTG
TAAGTGATTTATACAAAGCAAACCAGCATCTCTTGTCAGCGGCCAATGTCAGAATTCTTATTGATATATTTTCCTCAATAGCATCCCATGCCCACCAGCT
GAATTCTGAGACGGACCTGCTGAAGAAACTGCTGAAAGCGTGCTATATAGCAGAGATATCTGATCCTCCAATGGTACATTTTGAAAATGAGTCCTACGAG
AAATACCTTGACTTCCTCCGAGATTTGCTAGATGATAACCCATCCATGTCTGAGGCATTGAACGTCGAGGCACAACTTGCAGCAGTGTGCGAAAAGATAT
TGCTGATTTATCTGAACTGTACTGGATTGCAGACCGTGCAGCAAGATCCCGCTAACAAGCCAGTGATACACTGGATTCTTCCTTCAGGTTCGGCCAAAAA
GGAAGAATTAGCAGCAAGGACTTCTTTGCTCTTGTCAGCTTTGCGGGTATTGAGTGGTTTAGAAAGCGATTCATTTAGGGGCTATGCCAGACAATTCTTT
CCTTTGTTGGTTGACCTTGTGCGGTGTGAGCACAGCTCAGGTGAAGTTCAGCGTATTCTGAGCGACATTTTCCGATCATGTATAGGCCCCATTATAATGG
GATGA
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AA sequence
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>Potri.004G208400.1 pacid=42795326 polypeptide=Potri.004G208400.1.p locus=Potri.004G208400 ID=Potri.004G208400.1.v4.1 annot-version=v4.1
MSASQTLGGPSRCGRSLGPSLDKIVKNAAWRKHSHLVSSCKSVLDKLESLTDSNSHSPLFGLSPSDAEFVLHPILLALDSAYVKVVDPALECLFKLFSSG
LIRGEIDNGSKNVIIFKIIESVCKVCGIGDEAVELSVLRVLLSAVRSPCVLIRGECLVHVVRTCYNVYLGGLTGTNQICAKSVLAQVMLIVFTRVEEDSM
DVNVKPVSVSEMLLFTDKNLNEGSSIHFCQNFVNEVMTASEGVPDDKLLLLHSPPSDKLQNGSGGAGDDNDKVGEGDHKSELRDKEANGEAETDGGVGGS
GGVEAEGSKIREDGFLLFRNLCKLSMKFSSQETPDDQILLRGKILSLELLKVIIDNGGPIWRTDERFLNIIKQFLCLSLIKNSTLSVMAIFQLQCSIFMM
LLVKFRSGLKEEIGIFFPMLVLRVLENVNQPSFLQKMTVLNLLDKISQDSQIIIDIFVNYDCDVDAPNIYERIVNGLLKTALGPPPGSTTTLSSVQDITF
RHESVKCLVSIIRSMGAWMDQQLRIGDSYLPKISQSSTSTENHSTLNGEDASAPEYDLHPEVNSETSDAATLEQRRAYKIELQKGISIFNRKPSKGIEFL
INAKKVGGSPEEVAAFLKNTTGLNETVIGDYLGERDEFCLRVMHAYVDSFNFKVMGFGEAIRFFLRGFRLPGEAQKIDRIMEKFAERYCKCNPNSFTSAD
TAYVLAYSVIMLNTDAHNSMVKDKMSKADFIRNNRGIDDGKDLPEEYLGALYDHIVKNEIKMSANSSVPQSKQGNSLNKLLGLDGILNLVTGKQTEEKAL
GANGLLIRHIQEQFKAKSGKSESIYHVVTDAAILRFMVEVCWGPMLAAFSVTLDQSDDRLAASQCLQGFRYAVHVTAVMGMQTQRDAFVTSVAKFTYLHC
AADMKQRNVDAVKAIISIAIEDGNNLQDAWEHILTCLSRIEHLQLLGEGAPPDASYLTPSNGETEEKALKSMGYPSLKKKGTLQNPAVMAIVRGGSYDST
TVGVNSPGLVTPEQINNFISNLNLLDQIGNFELNHVFANSQRLNSEAIVAFVKALCKVSISELQSPTDPRVFSLTKIVEIAHYNMNRIRLVWSRIWNVLS
EFFVSVGLSENLSVAIFVMDSLRQLAMKFLEREELANYNFQNEFLRPFVIVMQKSSSTEIRELIVRCISQMVLSRVSNVKSGWKSVFMVFTVAAADERKN
VVLLAFETMEKIVREYFPYITETETTTFTDCVRCLTTFTNSRFNSDVSLNAIAFLRFCALKLADGGLICNVKSSVDDPSIPIVDEVASDVNPSDKDVHVS
FWIPLLTGLSKLTSDPRSAIRKSALEVLFNILNDHGHLFSHSFWTTVFNSAIFPIFNSFSDMKDVKDQDSPTSAPPHSVGSAWDSETSTIAVQCLVYLFV
NFFNVVRSQLQSVVSILMGFIRSPVKGPASAGVAALLRLIGELGSRISEDEYREIFLSLKEAAASLLPGFMKVLRIMDGIEMPESSHPFADADVSSDHGF
TNDDLEDDNLQTAAYVVSRVKSHIAVQLLIVQVVSDLYKANQHLLSAANVRILIDIFSSIASHAHQLNSETDLLKKLLKACYIAEISDPPMVHFENESYE
KYLDFLRDLLDDNPSMSEALNVEAQLAAVCEKILLIYLNCTGLQTVQQDPANKPVIHWILPSGSAKKEELAARTSLLLSALRVLSGLESDSFRGYARQFF
PLLVDLVRCEHSSGEVQRILSDIFRSCIGPIIMG
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DESeq2's median of ratios [POPLAR]
Coexpressed genes
Potri.004G208400 coexpression network
*The number of genes in the network is adjusted within 50 genes.*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.