Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G08060 463 / 3e-133 MOM1, MOM MORPHEUS MOLECULE 1, MORPHEUS MOLECULE, MAINTENANCE OF METHYLATION, ATP-dependent helicase family protein (.1.2) AT5G44800 205 / 2e-52 PKR1, CHR4, MI-2-LIKE PICKLE RELATED 1, chromatin remodeling 4 (.1) AT2G25170 178 / 2e-44 CKH2, SSL2, GYM, CHD3, PKL, CHR6 SUPPRESSOR OF SLR 2, GYMNOS, CYTOKININ-HYPERSENSITIVE 2, chromatin remodeling factor CHD3 (PICKLE) (.1) AT4G31900 177 / 3e-44 PKR2 PICKLE RELATED 2, chromatin remodeling factor, putative (.1.2) AT2G13370 160 / 7e-39 CHR5 chromatin remodeling 5 (.1) AT3G06400 136 / 9e-32 CHR11 chromatin-remodeling protein 11 (.1.2.3) AT5G18620 132 / 9e-31 CHR17 chromatin remodeling factor17 (.1.2) AT5G19310 127 / 3e-29 Homeotic gene regulator (.1) AT3G06010 124 / 3e-28 ATCHR12 Homeotic gene regulator (.1) AT2G44980 114 / 5e-25 ASG3 ALTERED SEED GERMINATION 3, SNF2 domain-containing protein / helicase domain-containing protein (.1.2)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.013G006000 [exp] 2318 / 0 AT1G08060 474 / 6e-136 MORPHEUS MOLECULE 1, MORPHEUS MOLECULE, MAINTENANCE OF METHYLATION, ATP-dependent helicase family protein (.1.2) Potri.005G010133 [exp] 1314 / 0 AT1G08060 166 / 5e-41 MORPHEUS MOLECULE 1, MORPHEUS MOLECULE, MAINTENANCE OF METHYLATION, ATP-dependent helicase family protein (.1.2) Potri.003G110100 [exp] 211 / 2e-54 AT5G44800 1988 / 0.0 PICKLE RELATED 1, chromatin remodeling 4 (.1) Potri.001G123400 [exp] 207 / 3e-53 AT5G44800 1996 / 0.0 PICKLE RELATED 1, chromatin remodeling 4 (.1) Potri.006G262200 [exp] 175 / 1e-43 AT2G25170 1826 / 0.0 SUPPRESSOR OF SLR 2, GYMNOS, CYTOKININ-HYPERSENSITIVE 2, chromatin remodeling factor CHD3 (PICKLE) (.1) Potri.018G021100 [exp] 169 / 9e-42 AT2G25170 1818 / 0.0 SUPPRESSOR OF SLR 2, GYMNOS, CYTOKININ-HYPERSENSITIVE 2, chromatin remodeling factor CHD3 (PICKLE) (.1) Potri.009G047800 [exp] 160 / 8e-39 AT2G13370 2129 / 0.0 chromatin remodeling 5 (.1) Potri.001G253400 [exp] 158 / 3e-38 AT2G13370 2206 / 0.0 chromatin remodeling 5 (.1) Potri.010G021400 [exp] 140 / 4e-33 AT3G06400 1748 / 0.0 chromatin-remodeling protein 11 (.1.2.3)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10037390 [exp] 860 / 0 AT1G08060 455 / 7e-130 MORPHEUS MOLECULE 1, MORPHEUS MOLECULE, MAINTENANCE OF METHYLATION, ATP-dependent helicase family protein (.1.2) Lus10041322 [exp] 847 / 0 AT1G08060 440 / 4e-125 MORPHEUS MOLECULE 1, MORPHEUS MOLECULE, MAINTENANCE OF METHYLATION, ATP-dependent helicase family protein (.1.2) Lus10038363 [exp] 202 / 1e-51 AT5G44800 1916 / 0.0 PICKLE RELATED 1, chromatin remodeling 4 (.1) Lus10036223 [exp] 193 / 6e-49 AT5G44800 1780 / 0.0 PICKLE RELATED 1, chromatin remodeling 4 (.1) Lus10021457 [exp] 174 / 3e-43 AT1G08060 152 / 8e-37 MORPHEUS MOLECULE 1, MORPHEUS MOLECULE, MAINTENANCE OF METHYLATION, ATP-dependent helicase family protein (.1.2) Lus10041019 [exp] 173 / 6e-43 AT2G25170 1776 / 0.0 SUPPRESSOR OF SLR 2, GYMNOS, CYTOKININ-HYPERSENSITIVE 2, chromatin remodeling factor CHD3 (PICKLE) (.1) Lus10016103 [exp] 172 / 1e-42 AT1G08060 150 / 3e-36 MORPHEUS MOLECULE 1, MORPHEUS MOLECULE, MAINTENANCE OF METHYLATION, ATP-dependent helicase family protein (.1.2) Lus10005339 [exp] 169 / 9e-42 AT2G25170 1787 / 0.0 SUPPRESSOR OF SLR 2, GYMNOS, CYTOKININ-HYPERSENSITIVE 2, chromatin remodeling factor CHD3 (PICKLE) (.1) Lus10009711 [exp] 161 / 2e-39 AT2G13370 2115 / 0.0 chromatin remodeling 5 (.1) Lus10022423 [exp] 159 / 1e-38 AT2G13370 2250 / 0.0 chromatin remodeling 5 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0023 [poplar] [flax] P-loop_NTPase PF00176 [poplar] [flax] SNF2_N SNF2 family N-terminal domain CL0023 [poplar] [flax] P-loop_NTPase PF00271 [poplar] [flax] Helicase_C Helicase conserved C-terminal domain
Representative CDS sequence Show only first row Show all	>Potri.004G212700.5 pacid=42794862 polypeptide=Potri.004G212700.5.p locus=Potri.004G212700 ID=Potri.004G212700.5.v4.1 annot-version=v4.1 ATGATACTAAAGCTAGTTGCAAAGCTAAGGATGAGGAAACCAATGGTTCAAAAAGGGAAAAACATTGTTAGCAGATCATCATCTAGTTCAGGTAGTGCGC CTGATACATCTGCTCTAAGAAGGTCAGCCAGAGAAACATCATCAAAGAAAAGCATGGCTCCAAGCCCTTCAAGTACTAGGAAGTCTGAACGTCTTGAGAA TCGGACCCCTACAACTCCTGCAGTCATGAGGAAATCCGGGAGAGTTGAGAAGCAAAGCATGTTGAGTCCTTTGAGAAGGTCTAAGAGGGGTAAGAATCAG TCATCATCCAGTTCTTTTGGTTCAAAGAAGTCTGGTAAAAGCTTGGGCTCATCAGTTATGAAAAAAAAGCACAGGAAAGAGAAGAGTGTGAAACTGTTGA CTCTTGAACCTAATGAAATCGGCTACAGTGAGAAACATATTATCAAAGCTGTTCAGGTTGAAACAAAGATAACTGATGCTCGTGTTTACAGGTCATTGTT CAAACAGCAACAAAAGAAAGCTAATCTGGAAGGTTTTTGTGAGGAGACGAAGAACAAGAAGGCTAAGTCATCTCAAGGATATTGCAGCAATCTCAGAGCT AGTGCTTCTGAGAACGTTGATGGGGGTGGTGACTGCAGTCAGAGGGAGGTAGAGGAATTGATTGAAGAGTGCATTTTGAAAGATTCTGAGAAAAAAATGT TAGGAAATTCCGTTTTGTCAGCTGGAGGTTCACCTGAGTTTGATAATAATCATCTGGACTTTGTCAACTATCTTTTAGAGTGCTGGCACAGGGGAGAGAA TGTTGTTCTTATTGATGATCAGGAACAAATTGCAAAGGTGATTTATTTTATTTTGTCAATATCATCCAATGCCACTTGGCCATTTCTTATCATCACGACT TCTGCTGCACTTCATTCATGGGAAGAAGGGCTATTTCGTTTGGCGCCATCTCTATATGCTGTGGTTTATCATGGAAACAAAGACATACGGAAAAGTATTA GGACGTTGGAGTTTTACAGTGAAGGAGGTTGCATTATGTTTCAAATACTTATAACCTCACCAGAAGTTATTATCGAGGATCTAAATATGCTTGAATCAAT GAAATGGGAAGCCATAATAGTTGATGAGTGCCAACGCTCCAGAATTTATTCACATTTTAAACAAATTAAGCTGCTAAGCACTGCTATGCGGCTTCTCCTT GTAAATGGTCAGCTTAAGGATGGCATCACTGAGCACTTGCTGTCTCTGCTTGTTCAGCAGAGTGATCCGGATGGTAGTGAATGCTTGGTGATTGATTCCA GCCATAAGACTGGCATTTTTAAGGAAAGGCTGTCACAATACATTGCAAATGGTTGCAAACCAGATTCCTCAAGGCTTAAAGAGTACTGGGTTCCTGTACA GTTATCCATCATGCAGCTTGAGCAGTATTGTGCCATTCTACTTTTGAACTCCTTATTACTTTGCTCATCCTCAAAGAATGATCTTGCTGGTTCCCTACAT GATATTCTTATTTCTGCTCGAAAGTGCTGTGATCATCCCTACATCATGGATCCATCGCTACAAATTTCATTAACAAAAGACAGTAAAGAAGCTGACATTT TAGATATTGGAATAAAAGCTAGTGGCAAGCTACAACTCCTGGATGCAATGCTTTTCAACATAAAAGAGAGGGGATTAAGAGTGCTAGTTCTTTTTCAGTC TAGTGGAGGTTCTGGAAAGGATAATGTTGGAGATATTTTAGATGACTTTATACGTCAAAGATTTGGCAAGGGTTGTTATGAACGTGTTGATGGGCATGTA CTCCCTTCAAGGAAGCAAGCTGCTTTGAAAAACTTCAACAATCTTCAGGAAGGGAGGTTTGTGTTCTTATTAGAAACCCGTGCTTGTAGTCCCAGCATAA AACTTTCATCTGTGGATACTGTTATCATATTTGCCAGCGATTGGAAGCCAAATACTGATATAAGGAACCTGCAAAAAATAACGCTTTATTCAGAGTCTGA ACAGATAAATATATTTCGTCTATACTCTTCTTGTACTGTGGAAGAAAAAGTTTTAATTGTTGCAAGGCAAGATAAGACACTTGATAGAAATTTACAGAGG ATAAACCAGGGTGCTAGTCACATGCTTCTGATGTGGGGGGTTTCATATCTGTTTGACAAATTGTCAGAGTTTAATTGTGGCAATGACCCTGCCTCCAGTG GAACATTGTTGTCTGAGCAGTCACATATGAAAGATGTTATACAGGAGTTCTTAACCATAGTAACTCAGAAGGGAAAAGACAAGAATCTAATTAACTCTAT AATTTTGAATGTTAAACAAAATCAAGGAAGTTATACTACTAATCTTCCATTGCATGGTGAGCCAAAAATTCAATTGTTGGATGAAGAGCTGCCTCATGTA TTTTGGGAAAGGTTACTTAAGGGAAAACAGCCACAGTGGAAATATAGTTCTGGTTTGTTTCAGAGGAACAGAAAAAGGGTTCAATATTTTGATGACACAC AGAAGAACCCTGAAGTCGAGGCTGATGAAGTTGTAAAGAAGCGCAAGAAAGTGGCCATTGATAACTCCAATTCACCATCTCTAAAAGCTGCTCCAATAGG AACTTCTGGAGCTCCAGTGTGTAGCATGTCTCAATTCATGCCAAGTTCAACTGGTTGTCTTACTACAACTGATGCAAATCATGTTTCCAACTTCACCCAT TTGAATAATAAATTATCACTTCTACCAAAAGCTAATACGGTTGATTATAATGAAAGAATGAATTTACATTATTCTCGGAAGAGTCTCCATCTCGTTTTGA AGCCAGAGATAGAAAAACTTAGTGAAATTTTACAACTCCCAGAGGATGTCAAGGTCATGGTTGACCAATTTCTGGAATATGTACTGAATAATCACCATGT CAGTAGAGAGCCAGCTAGCATATTGCAAGCATTTTTGATATCCTTGTGTTGGACTGCAGCTTCCATGATTAAGTACAAACTTGATCGCAAAGAATCACTT GCACTGGCAAAACAGCATTTGAACTTTTGCTGCACGAAGGATGAGGCAGATTTTGTTTATTCAAAGTTGCGATATCTGAAGAAAGTATTTCTTTATCATA CAGGAAATTTTAAGTTGGCTGGCTCTCCAAAAGCTGCAGAATTTTCAACTAAAGATCTCAGTACAAATCAGTCAAATGGAAGACCTTCACTGTCAACACC ATCTAACATGCAAAAGGTTAGAATAGAGGTTGAAAACCTGAGACCTAGTCAAGAATTCTTCATTGATCAGGCCCTTTCCCATCTAGGATTGACACAGAAA GATTACTCAGAAAACATTGGAGAGAAATGTGATGAACAGATGAACAAGCTATTGCAGAGGCAACGAGAAGAAAGGGAAGAGTTCAAAAAAAAGTACGAGG AAGAAAAGGCAGAACTTGAGCTTATGCAGAGAACAGAGGCAGCTGTTATTCATTTACACAGTAATAGTTCAATGAGAACAGATAAACTCAAGGTACTGGA TAATGTATTTGCAAAAGAGTTCAGAGAGCTTAAACGGAAGATGGAGATACGCCTTAATAATGTTTTGGAATTTCAACTGGCTACAAGGAACAAGTTGCAA GAGAGGAAGGCTCATTGGATTGGAGTGAAATTGTCTGGATTACTAAATAAACCACTTGCAGATGAGTCTGGATATGATCAACAAAACGCTGCAACTTTGA ATTCTTGTTCCAAAGAACAGACTTCTGAACGAGCCCAAAGCATGCCAGATGGAGAGGTTCTATTGGAAGCTCTTGAAACTGTGAGTTTGAATGAGGATGT ATTTTCTGGGGTATTGTCTGCATCTGAACCAATGTTTGATGGGGCTAGTTCCAGCATGCTAGACAGAGAGGTTCCTTTGGAAATGCCCCAGACTGCAAGT GTGAGGAATATTTCAGAGAATATTGTCTATTTGAATGCATCTTCAGGTGAAGGACAAATTCCTGTTACACAGGTTGCAGTGAGAGTCCTTGAGGCTATCA GCTCTAGTGATGGCCCAGAGAATACCATTCATAAATCATCATCTGAAAGTCGTAATAGAGATGCATTAATGGTGCCTGATAGTGAATTTCCCTTGGGAGT GACTGAGATTGTCAGTTCCACTGGTGGCCTGGAGAATGCTGCTTCTGCAAATCCTTCACCATCTGAAGGATGTACTGTCAGAACAACTTCATGCATGGAT GGCAGAGAAGTTCTGTTGGAAGTGCCTGAAACCGCTTCTTTGGAAGCTGAGCATGGTAACAGAGTTATGGAGAAAGATGGAATATCGGCTATGGTATCTG ATAATGCCACTGAAGAAGATCAGCAGAATGGATTGGTGTCTATGCTTAATCAAGATTCTCAATCTGATAATATTATTGCAGTCAACCAGCAAAATGGAGA GGTTCTTTTAGGAGTGCCCCAAACCAATGAAGTTGGCCTGCAGGATGAGGAGGTTCCATCAGGAGTTCATGGAACTCCTGTAGAAGGGAGTGCTAGTAAT GGTGGAGAGAACACTGGTGTTTATGTTACAGCCTTTTCTATCGGTACTGGAGTTGATCAGCTGGCTGGAGTGCTTCCATCAGGAGGGTTTGAAACCGCTA CTAGTGCAGAATTGGAGGGTAGCCGCACTCAGCGAGAGATTGACAGCATACATGCTGTAGCCTCAGATACTAGTCAATCAGCGGAATCCTCTAGACTGCA AGATGGAGTTGCACAAGTTTGTGATAACCAGATTGCTTTTCAACAAGTTGATGCCTCAGCATCCCAACCTCTTGTTGTAGCTTCTGGCCAATCTCCTAAT GATGCATCTGTCACTGAGCATCTGCTGGAATTGTTACTATCAACTGGCTCTCCTACTCCTAGTGGTTCACAGCCTGCAACTTCATTTGCACAACTTTCAC CTATTGACTCGATAGCTGTTGGTGGATCAGGGATGCATATTTCAAACATGAGGGCTGCACCTGTTACCCCTGGAATTAGTAATCGTCCTGGAACTGCACT TGCTGTGCGAATGCCTGTATCTATGTCTCAAGATCCACTTCAAAATGAGTTGGATAGATTAAGCAAAGAAACTGAAGAAATCATCAAGATCCATGAAGAT ACAAAGCTGCAGTTGAAATCTGATTGCGAGAAGGAGATAGTGGAGGTTGTAGCTCAAATTCATAAAAAACATGATATTAAACTTCAGGAGATAGAATCTG ATTTCCAGTGTAAGAAGAAAGAGATGAATGACAATCAAAACAAAGTTCTTATGAACAAGATATTGGCTGAGGCTTTCAAGACCAAGTGCATGGATAGTAG GGCATCTAGCACCCTTGGCAAGCAGCAAGAGATCACCTCTAGTGCTGTGCAGCAGCTACTTCGGCAATCTCAACCCACTGCTCAGAGGCCTCCTATTGTT GCTTCATCTGGTGTTTCTGCAGATGGTCATCAAACAAGTCCCTCACTTTCCCCTCCCTCCCCACCTCTAGAGGTTGTTCGTTGCTCATCACTTTTATCAG GCACCCCTACCAGACCACCACATATTGGTTCCATCTCTCCTATCACTAACAATCTCCAACTTGGTAGTGGGATTCGAGCTCCTGCCCCACACCTGCAACC TTTTAGACCTTCAGCATCCATATCAACAACTGGTCTTTCTTCCTTTCTACATGGGATGCAAAGTCAACAAGTACCTTCAACTTCTCCCACGCTTTCTGAG ATTCCTTCACGAGCTCCAGCATCTGTGCAACAATCTGGTCCTCAGACGACGACAAATTGTTGTGAAAGCATGGGGGTCTCGCCTTCTAGCACATATCTCT CTGGACTTGATTCGTTAATGGATGGAGGTTATCAAACAAGTACAAATGCAACTCAACCCTGCAGTTTTCCTCCAGTAACAAATTTGATTTCAAACCCAAA CCAGTTGACCCAGCCAGAGCTTAGCATGCTACATAGTGTGAATAGTGTGCTGACAAACCCAGCAAGTGAGGAATTGCAGTTGTCTCCAAGCTTTTGTTAG
AA sequence Show only first row Show all	>Potri.004G212700.5 pacid=42794862 polypeptide=Potri.004G212700.5.p locus=Potri.004G212700 ID=Potri.004G212700.5.v4.1 annot-version=v4.1 MILKLVAKLRMRKPMVQKGKNIVSRSSSSSGSAPDTSALRRSARETSSKKSMAPSPSSTRKSERLENRTPTTPAVMRKSGRVEKQSMLSPLRRSKRGKNQ SSSSSFGSKKSGKSLGSSVMKKKHRKEKSVKLLTLEPNEIGYSEKHIIKAVQVETKITDARVYRSLFKQQQKKANLEGFCEETKNKKAKSSQGYCSNLRA SASENVDGGGDCSQREVEELIEECILKDSEKKMLGNSVLSAGGSPEFDNNHLDFVNYLLECWHRGENVVLIDDQEQIAKVIYFILSISSNATWPFLIITT SAALHSWEEGLFRLAPSLYAVVYHGNKDIRKSIRTLEFYSEGGCIMFQILITSPEVIIEDLNMLESMKWEAIIVDECQRSRIYSHFKQIKLLSTAMRLLL VNGQLKDGITEHLLSLLVQQSDPDGSECLVIDSSHKTGIFKERLSQYIANGCKPDSSRLKEYWVPVQLSIMQLEQYCAILLLNSLLLCSSSKNDLAGSLH DILISARKCCDHPYIMDPSLQISLTKDSKEADILDIGIKASGKLQLLDAMLFNIKERGLRVLVLFQSSGGSGKDNVGDILDDFIRQRFGKGCYERVDGHV LPSRKQAALKNFNNLQEGRFVFLLETRACSPSIKLSSVDTVIIFASDWKPNTDIRNLQKITLYSESEQINIFRLYSSCTVEEKVLIVARQDKTLDRNLQR INQGASHMLLMWGVSYLFDKLSEFNCGNDPASSGTLLSEQSHMKDVIQEFLTIVTQKGKDKNLINSIILNVKQNQGSYTTNLPLHGEPKIQLLDEELPHV FWERLLKGKQPQWKYSSGLFQRNRKRVQYFDDTQKNPEVEADEVVKKRKKVAIDNSNSPSLKAAPIGTSGAPVCSMSQFMPSSTGCLTTTDANHVSNFTH LNNKLSLLPKANTVDYNERMNLHYSRKSLHLVLKPEIEKLSEILQLPEDVKVMVDQFLEYVLNNHHVSREPASILQAFLISLCWTAASMIKYKLDRKESL ALAKQHLNFCCTKDEADFVYSKLRYLKKVFLYHTGNFKLAGSPKAAEFSTKDLSTNQSNGRPSLSTPSNMQKVRIEVENLRPSQEFFIDQALSHLGLTQK DYSENIGEKCDEQMNKLLQRQREEREEFKKKYEEEKAELELMQRTEAAVIHLHSNSSMRTDKLKVLDNVFAKEFRELKRKMEIRLNNVLEFQLATRNKLQ ERKAHWIGVKLSGLLNKPLADESGYDQQNAATLNSCSKEQTSERAQSMPDGEVLLEALETVSLNEDVFSGVLSASEPMFDGASSSMLDREVPLEMPQTAS VRNISENIVYLNASSGEGQIPVTQVAVRVLEAISSSDGPENTIHKSSSESRNRDALMVPDSEFPLGVTEIVSSTGGLENAASANPSPSEGCTVRTTSCMD GREVLLEVPETASLEAEHGNRVMEKDGISAMVSDNATEEDQQNGLVSMLNQDSQSDNIIAVNQQNGEVLLGVPQTNEVGLQDEEVPSGVHGTPVEGSASN GGENTGVYVTAFSIGTGVDQLAGVLPSGGFETATSAELEGSRTQREIDSIHAVASDTSQSAESSRLQDGVAQVCDNQIAFQQVDASASQPLVVASGQSPN DASVTEHLLELLLSTGSPTPSGSQPATSFAQLSPIDSIAVGGSGMHISNMRAAPVTPGISNRPGTALAVRMPVSMSQDPLQNELDRLSKETEEIIKIHED TKLQLKSDCEKEIVEVVAQIHKKHDIKLQEIESDFQCKKKEMNDNQNKVLMNKILAEAFKTKCMDSRASSTLGKQQEITSSAVQQLLRQSQPTAQRPPIV ASSGVSADGHQTSPSLSPPSPPLEVVRCSSLLSGTPTRPPHIGSISPITNNLQLGSGIRAPAPHLQPFRPSASISTTGLSSFLHGMQSQQVPSTSPTLSE IPSRAPASVQQSGPQTTTNCCESMGVSPSSTYLSGLDSLMDGGYQTSTNATQPCSFPPVTNLISNPNQLTQPELSMLHSVNSVLTNPASEELQLSPSFC

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT1G08060		MOM1, MOM	MORPHEUS MOLECULE 1, MORPHEUS ...		Potri.004G212700 [exp]	0	1
AT1G12700		RPF1	RNA processing factor 1, ATP b...		Potri.006G271400 [exp]	1.73	0.8417
					Potri.007G113400 [exp]	4.47	0.8300
AT1G62930		RPF3	RNA processing factor 3, Tetra...		Potri.006G242500 [exp]	4.89	0.8142
AT5G01660			unknown protein		Potri.016G127600 [exp]	6.24	0.7644
AT3G18270		CYP77A5P	"cytochrome P450, family 77, s...		Potri.012G054200 [exp]	7.28	0.7097
AT5G60690	HD	IFL1, REV	REVOLUTA, INTERFASCICULAR FIBE...		Potri.004G211300 [exp]	7.74	0.7566	Pt-HB1.7
AT5G61460		SMC6B, ATRAD18,...	STRUCTURAL MAINTENANCE OF CHRO...		Potri.003G107700 [exp]	8.12	0.7972
AT2G28290		CHR3, SYD	SPLAYED, CHROMATIN REMODELING ...		Potri.010G019150 [exp]	9.38	0.8119
AT5G37020	ARF	ARF8, ATARF8	auxin response factor 8 (.1.2)		Potri.017G141000 [exp]	12.04	0.8043
AT3G14470			NB-ARC domain-containing disea...		Potri.018G135700 [exp]	16.15	0.7741

Compare expression of checked genes

Potri.004G212700 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.