Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol	Pt-ATGSTZ2.1
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G02390 306 / 2e-106 GST18, ATGSTZ1 GLUTATHIONE S-TRANSFERASE 18, glutathione S-transferase zeta 1 (.1.2.3) AT2G02380 294 / 8e-102 ATGSTZ2 glutathione S-transferase (class zeta) 2 (.1) AT2G30860 72 / 2e-15 GLUTTR, ATGSTF7, ATGSTF9 glutathione S-transferase PHI 9 (.1.2) AT2G29480 71 / 7e-15 GST20, ATGSTU2 GLUTATHIONE S-TRANSFERASE 20, glutathione S-transferase tau 2 (.1) AT2G29490 70 / 2e-14 GST19, ATGSTU1 GLUTATHIONE S-TRANSFERASE 19, glutathione S-transferase TAU 1 (.1) AT2G29460 69 / 7e-14 GST22, ATGSTU4 GLUTATHIONE S-TRANSFERASE 22, glutathione S-transferase tau 4 (.1) AT5G41210 68 / 1e-13 GSTU12, GST10, ATGSTT1 glutathione S-transferase THETA 1 (.1) AT3G62760 68 / 1e-13 ATGSTF13 Glutathione S-transferase family protein (.1) AT2G29450 67 / 2e-13 ATGSTU1, AT103-1A, ATGSTU5 ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 1, glutathione S-transferase tau 5 (.1) AT1G02940 67 / 4e-13 ATGSTF5 glutathione S-transferase (class phi) 5 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.014G069600 [exp] 265 / 2e-90 AT2G02390 204 / 1e-66 GLUTATHIONE S-TRANSFERASE 18, glutathione S-transferase zeta 1 (.1.2.3) Potri.010G070900 [exp] 73 / 1e-15 AT2G29420 221 / 9e-73 GLUTATHIONE S-TRANSFERASE 25, glutathione S-transferase tau 7 (.1) Potri.010G061301 [exp] 72 / 3e-15 AT2G29420 202 / 9e-66 GLUTATHIONE S-TRANSFERASE 25, glutathione S-transferase tau 7 (.1) Potri.010G061800 [exp] 72 / 4e-15 AT2G29420 187 / 1e-59 GLUTATHIONE S-TRANSFERASE 25, glutathione S-transferase tau 7 (.1) Potri.002G207672 [exp] 71 / 8e-15 AT3G62760 302 / 2e-105 Glutathione S-transferase family protein (.1) Potri.016G118500 [exp] 71 / 1e-14 AT2G29420 194 / 3e-62 GLUTATHIONE S-TRANSFERASE 25, glutathione S-transferase tau 7 (.1) Potri.003G125800 [exp] 70 / 2e-14 AT5G41210 327 / 2e-114 glutathione S-transferase THETA 1 (.1) Potri.008G175100 [exp] 69 / 4e-14 AT2G29420 169 / 1e-52 GLUTATHIONE S-TRANSFERASE 25, glutathione S-transferase tau 7 (.1) Potri.014G132200 [exp] 69 / 6e-14 AT3G62760 295 / 2e-102 Glutathione S-transferase family protein (.1)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10005367 [exp] 318 / 2e-111 AT2G02390 284 / 4e-98 GLUTATHIONE S-TRANSFERASE 18, glutathione S-transferase zeta 1 (.1.2.3) Lus10020519 [exp] 317 / 7e-111 AT2G02390 283 / 2e-97 GLUTATHIONE S-TRANSFERASE 18, glutathione S-transferase zeta 1 (.1.2.3) Lus10030274 [exp] 272 / 3e-93 AT2G02390 249 / 6e-84 GLUTATHIONE S-TRANSFERASE 18, glutathione S-transferase zeta 1 (.1.2.3) Lus10004026 [exp] 168 / 4e-53 AT2G02390 143 / 6e-44 GLUTATHIONE S-TRANSFERASE 18, glutathione S-transferase zeta 1 (.1.2.3) Lus10005368 [exp] 76 / 2e-18 AT2G02390 72 / 8e-18 GLUTATHIONE S-TRANSFERASE 18, glutathione S-transferase zeta 1 (.1.2.3) Lus10001419 [exp] 77 / 3e-17 AT2G30860 297 / 3e-103 glutathione S-transferase PHI 9 (.1.2) Lus10029816 [exp] 77 / 5e-17 AT2G30860 308 / 1e-107 glutathione S-transferase PHI 9 (.1.2) Lus10029815 [exp] 76 / 9e-17 AT2G30860 332 / 2e-117 glutathione S-transferase PHI 9 (.1.2) Lus10020735 [exp] 76 / 2e-16 AT2G30860 334 / 4e-118 glutathione S-transferase PHI 9 (.1.2) Lus10020736 [exp] 74 / 6e-16 AT2G30860 308 / 6e-108 glutathione S-transferase PHI 9 (.1.2)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0172 [poplar] [flax] Thioredoxin PF13417 [poplar] [flax] GST_N_3 Glutathione S-transferase, N-terminal domain
Representative CDS sequence Show only first row Show all	>Potri.004G232600.6 pacid=42795282 polypeptide=Potri.004G232600.6.p locus=Potri.004G232600 ID=Potri.004G232600.6.v4.1 annot-version=v4.1 ATGGCAGAAAGTGGAGAGAGCAATAAGAATAAATTGAAGCTGTATTCTTACTGGAGGAGTTCTTGCTCTCAACGTGTTCGCATTGCTCTTAACCTCAAAG GGCTCGAATATGAGTATATACCTGTTAACCTGCTTAAAGGAGAACATTTCAGTCCTGATTTCTTAAAGCTGAATCCTCTCGGATATGTGCCTGCGCTGGT AGATGGGGAGATTGTAATTTCTGACTCTTTTGCCATTTTAATGTATTTGGAAGAGAAGTACCCTCAGCATCCTTTGTTGCCTAGTGATCTTCAGAAAAAA GCCCTTAATTATCAGGCTGCAAATGTTGTCTGCTCTAGCATACAGCCTCTTCAAAACTTGGCTGTGCTAAAGTATATTAAGGAAAAAGTTGGTCCAGATG AGGTGATTCCTTGGGTTCAGAGTCATATTAACAAAGGGTTTGCAGCACTAGAGAAGCTGCTAAAAGACTCTGCTGGAAAATATGCAACTGGAAATGAAGT ATCCATGGCAGATCTGTTTATAGAACCACAGATTCATGGAGCAATTAAAAGGTTCAATGTTGACATGACTCAGTTCCCTCTTCTATCAAGGTTGCATGTA GCATATAGTGAGCTGCCAGCATTCCAGAATGCCATGCCAGAAAATCAGCCAGATGCCTCACCTTCATCTGTCACTTAG
AA sequence Show only first row Show all	>Potri.004G232600.6 pacid=42795282 polypeptide=Potri.004G232600.6.p locus=Potri.004G232600 ID=Potri.004G232600.6.v4.1 annot-version=v4.1 MAESGESNKNKLKLYSYWRSSCSQRVRIALNLKGLEYEYIPVNLLKGEHFSPDFLKLNPLGYVPALVDGEIVISDSFAILMYLEEKYPQHPLLPSDLQKK ALNYQAANVVCSSIQPLQNLAVLKYIKEKVGPDEVIPWVQSHINKGFAALEKLLKDSAGKYATGNEVSMADLFIEPQIHGAIKRFNVDMTQFPLLSRLHV AYSELPAFQNAMPENQPDASPSSVT

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT2G02390		GST18, ATGSTZ1	GLUTATHIONE S-TRANSFERASE 18, ...		Potri.004G232600 [exp]	0	1	Pt-ATGSTZ2.1
AT2G06025			Acyl-CoA N-acyltransferases (N...		Potri.006G142100 [exp]	3.46	0.7174
AT1G73030		CHMP1A, VPS46.2	CHARGED MULTIVESICULAR BODY PR...		Potri.003G045300 [exp]	3.46	0.7237
AT3G60640		ATG8G	AUTOPHAGY 8G, Ubiquitin-like s...		Potri.002G144600 [exp]	10.67	0.6817
AT5G17570			TatD related DNase (.1)		Potri.013G073800 [exp]	12.48	0.7226
AT5G17840			DnaJ/Hsp40 cysteine-rich domai...		Potri.013G066000 [exp]	15.16	0.6733
AT1G02305			Cysteine proteinases superfami...		Potri.002G184300 [exp]	16.00	0.6843
AT4G09830			Uncharacterised conserved prot...		Potri.001G003400 [exp]	17.43	0.7356
AT3G23490		CYN	cyanase (.1)		Potri.010G068200 [exp]	17.94	0.7133	Pt-CYN.1
AT3G11730		ATFP8, AtRABD1	ARABIDOPSIS THALIANA RAB GTPAS...		Potri.004G226600 [exp]	26.92	0.6646
AT5G37055		ATSWC6, SEF	SERRATED LEAVES AND EARLY FLOW...		Potri.013G152600 [exp]	27.49	0.7018

Compare expression of checked genes

Potri.004G232600 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.