Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G08060 160 / 2e-39 MOM1, MOM MORPHEUS MOLECULE 1, MORPHEUS MOLECULE, MAINTENANCE OF METHYLATION, ATP-dependent helicase family protein (.1.2)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.013G006000 [exp] 1275 / 0 AT1G08060 474 / 6e-136 MORPHEUS MOLECULE 1, MORPHEUS MOLECULE, MAINTENANCE OF METHYLATION, ATP-dependent helicase family protein (.1.2) Potri.004G212700 [exp] 1219 / 0 AT1G08060 464 / 2e-133 MORPHEUS MOLECULE 1, MORPHEUS MOLECULE, MAINTENANCE OF METHYLATION, ATP-dependent helicase family protein (.1.2)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10041322 [exp] 277 / 4e-75 AT1G08060 440 / 4e-125 MORPHEUS MOLECULE 1, MORPHEUS MOLECULE, MAINTENANCE OF METHYLATION, ATP-dependent helicase family protein (.1.2) Lus10037390 [exp] 258 / 3e-69 AT1G08060 455 / 7e-130 MORPHEUS MOLECULE 1, MORPHEUS MOLECULE, MAINTENANCE OF METHYLATION, ATP-dependent helicase family protein (.1.2) Lus10021457 [exp] 236 / 1e-62 AT1G08060 152 / 8e-37 MORPHEUS MOLECULE 1, MORPHEUS MOLECULE, MAINTENANCE OF METHYLATION, ATP-dependent helicase family protein (.1.2) Lus10016103 [exp] 231 / 6e-61 AT1G08060 150 / 3e-36 MORPHEUS MOLECULE 1, MORPHEUS MOLECULE, MAINTENANCE OF METHYLATION, ATP-dependent helicase family protein (.1.2)
PFAM info
Representative CDS sequence Show only first row Show all	>Potri.005G010133.5 pacid=42804102 polypeptide=Potri.005G010133.5.p locus=Potri.005G010133 ID=Potri.005G010133.5.v4.1 annot-version=v4.1 ATGGGAAATGATACCAAGGTTAGTCGTAAAGGTAAGGATGAGGAAAGTAATGATATAAAAGGGAGAAACATTGGTAACAGATCATCAAGCAGTTTGGGTG CTGCTAATGATACTTTTGGTCTAAGAAAGTCAGCTAGAGAAACATCATTCAAGAAAAACTTGACTCCGAGCCCTTCAAGTAGTAGAAAGTCTGAACGTAT TGAGAAGCAGACCCCCCCTGCAATTCCTTCTGTTACGAGGAAATCTGAGAGATTGGTTGAGAAACAAAGTTTACCGACTCCTTCTAGAAGGCCTGAGAAG GGTAAGAATCAGTCGTCATCTAGTTCTTCTGGTTCAACGAAGTGTGGTAAAAGCTCGGGCTCTTTAATTATGAAGGAAAAGCACAAGAAAGAGAAGAGTG TGAAACAACTTGAAACTGAAGAAGTTGGAAACAATGACAAACCTGTTATCAAAACTGTCCTGGTTGGAATTAAGAGAATGGATGCTCGTGCTTACAGGGA ACTGTTCAAACAGAAACAAAAGAAAGCTAAACTGGAAGGTAGCGAAGATCTGATAGTAAATAGGACACCTGGGGTTGATACTGAGGTGAAGAGTGGTTGC AAAGTGATGTCTTCTAAACAAAAAAGAAGTATTGACGACTTGAATTTTGATGCTACGGAAATGGTTTCAAATGAAGATGGCGATGCAGCTCCATATGAGT GCGGCAGAACTGATTCTGTGGATTCATGTTCCGAAAGGCAAAGGTTAAAGAAGCGCAATAAAGTGTCCAACAATAACACTGATTCGCCTTCTCTGAAAGC TGCTTTAATAGGAACTTCTGGAGCTCCAGTGCATAAGATGTCTCAAGTCATGCCAAGTTCAGTTGGCCTTCTTAACACAACTGATGCGAATCATGTTTCC AACTTCTCACAGTTGACTAGTAAATTATCACAAGTACTGAAAGCCGACATGGTTGGGTATAATGGAGGAAGGAACTTGCATGATGATTCTGAGAAGAGTC TCCATCTTTTTTTGAAGCCTGAGATAGCAAAACTTTGTGAAATTTTGCAACTCCCAGAAAATGTCAAAGTCATGGTGGAACAGTTTCGGGAATATGTACT GAATAATCACCATGTCAGTAGAGAACCACCTAGCTTATTGCAGGGATTTCTGATATCCTTGTGTTGGACTGCAGCTTCCATGCTAAAGCACAAACTTGAT CACAAAGAATCACTTGCACTTGCAAAAGAGCATTTGAATTTCAGCTGCAAGAAAGACGAGGCAGATTTCGTTTACTCAAAGTTGCGATGTCTGAGGAAAT TATTTCTTTATCGCACTGGGACTTGTAAGGTAGCTGGCTCTCCAAAAGCTTCAGGTTTTTCATTAGAAGATTTCGGTCAGAATCAGTCAAATGGAAGATC TTCACTGTCAACACCATCTAACAAGCAAAAAGTGAGAATGGAGGTTGAAAACCTCAGATCTGGTCAGGAGTTCTCCATTAATCAGGTCCTTTCTCATCTG GAATTGGCACAAAAAGATTACTCAAAAAGTATCAAAGACATTGAAAAGAAATGTGATAAACAGATGAGGAAGCTATTGCAGAGGCAACAAGAAGAAAGGG AAGAGTTTGAAAAGAAGTATGAGCAAGACAAGGCAGAGCTCGAACATAAGCAAAGAACAGAGGCAGCTGTTATTCGTTTACACAGTAATAGTTCAGTGGA TAAACTTAAGATGCTGGATAATGTGTATGCAAAAGAGTTCGAAAAACTTAAACGGCAGATGGATATGCGTCTTAATAATCTTTTGAAGTTGCAACTGGCT ACAAGGAACAAGTTGCAAGAGAGGAAGGCTCAATGGATTGAAGGAGTGAAGTCCTGGGCACATGCTGAATTAATAAGTAAACCACCTGCAAATGAGTCTG GATATGATCAAGAAAACACTGTCACTTTGAATTCTTGTTCCAGAGAACAGACTCCCAAACGAGTCCAAAGCATGCCAGATGGAGATGTTCCACTGGAAGT TACTGAAACTGTGAGTTCAAATGAGGATGTACTTCCTGGGGTAATGGCTGCTTCCAAACCAATGTCCGATGGAGCTGCATCCAGCATGCTTGACCAAGAG GTTCCCTTGGAAGTGCCTCAGACTGCAAGTGCGAGGGATGTTTCAGAGGATGTTGTGTCTGTAAATTCATCTCCATGTGAAGAACAAATTCCTGATTTGA AGATTACATTGGGAATACCTGAGGCTAACAGCTGTAATGATGGTCCTGAGAACAGCATTCATAAATCATCATCTGAAGACGGTTCTGGTAGAGTTGCATT AATGGTGCCTGATAGAGAATTTCCATTGGGAGTGACTGAGATTGTCAGTTCCACCGGTGGCATGGAGAATTCTGCTTTAAGTCCTTCACCTTCTGAAGGA CAAACTTCTGCCAGAACCACGTCTTGCATTGATGGAAGAGAAGTTTTATTGGAAGTGCCTGAAACAGCCCCTCCGGAAGCTGAGGAGGCCGTTAACACAG CTTTGGATAAAGATGGAGTAGCCAGTATGGAATTGGGTAATGCCATTGAAGTTGATAAGCAGAATGGTGCAGTCTGTATTCTTAATCAAGAGTCTCACCG TGATGTAGCAGCAGTCAACCTGCAAAATGGAGAGTCTCTGTTAGAAGTGTCTGAAAACAATAGAGTCAACCAGTCGGATGAAGTGGTTCCATCAGGGGTT TGCGAAACTCCAGTGGTAGGGAGTGGTACCACTGGTCAAGAGAAAAGTAGAGTTTGTGTTACCACCTTGGCTTGTGGTACTGGAGTTGATCAGCAGGCTG GAGTGCTTCCATCAGGAGGTTTTGAAACTGCTACTGTTGCAGAAGTGGGGAGTGGCCCCACTTCGAGAGAGATTGACAGAATGCCTGCTGTAGCCTCAGA TAGTAGTCAACCAACTGAACCCTTTAGATTGCAAGATAGAGCTGCACAATTTTGTGATAACTGGATTGCTTTTCAACAAAGTGATGCCTCAGCATCCCAA CCTGTTGTAGTGTCCAATCAATCTCCAAATGATGCACCTGTCAGAGAGCATACGCTGCATTTGTTACCATCCATCGACTCCCCTACTAGTTCACAGCTTA CAACTTCATTTGCGCAACATGTGCCTATTGATTTGATAGCTGTTGGTGGACCACAGACTCATATATCAAACATGAGGACAGAACCTGTTACTTCTAGAAT TAGCAATCATTCTGCAACTGCACCTGCTGTTCGAATGCCTGTATCCACGTCTCAAGATCCACTGCAAAATGAATTGGATAGAATACGCACAGAAACAGAC CAAATTATCAAGATCCACGAAGATACAAAGCTGCGGCTGAAATCTGATTGTGAGAAGGAGATACAGGAAGTTGTCGCTCAAATTCGCAGAACGTATGATT TTAAACTTAAGGATTTAGAATATGAATTCCTTCGTAAGAAGAAAGAGATGGATGACAATCAAAGCAAAGTTCTCATGAATAAGATATTGGCTGAGGCATT CAGGACCAAGTGCAAGGATAATAGGGCATCTAGGCAGCAAGAGATGACCTCTGGTGTTATGCAGCAGCTGCTTCAGCCATCCCAACCTTCTACACAGAGA CCTTCTATTGTTACTGGCCCGTATTCAACTGGTCTTCCTGCAGTTAGTCTGCAGACAACTCCCACATCTTCCCTTCCTGCCCCACCTGTACAGGCTGTTC ATTGCTCTGCACTTTTTTCAGCCACCCCAACCAGACCACCACATATCAGCTCCATCTCTCCTACCACAAGCAATCTCCAAGTTGGTACTGAGATTCGAGC ACCTGCTCCACACCTGCAACATTTTAGACCTTCAGCATCCATGTCGGCAACTAGTCTTTCTGCCTTCCCAAGTGGGATCCTTCAACATATACCTACAACT TCTCCCACACTTTCTGAGTTTCCTTCTCTAGCTCCAGCAACTGTGCAACAACCTGGTCCTCGGATTATGACAAATTTGCTCAAAAGCATGGGAGTTTTTC CTTCTAGAACATCCTTCCCCAGACCAGAATCGTTAATGGATGTAGATAATCAAACGAGCACAGAGATTCCTTCCGTAGCTCCTGCAACTGTGCAACAATC TGGTCCTCAGATTATGACAAATTTGCTTGAAAGCATGGGAATTTTTCCTTCTAGAACATCCCTCTCCAGACCAGAATCGTTATTGGATGTAGATAATCAA ACAAGTACAGATGCAACTCAGCCCTGCAGTTTTCCCCCGCTAACAGATTTGAATTATAACATAAACCCATTGGTTCAAGAAAGTGAGGTTGTTTGTTTAT CAGATGATGATTGA
AA sequence Show only first row Show all	>Potri.005G010133.5 pacid=42804102 polypeptide=Potri.005G010133.5.p locus=Potri.005G010133 ID=Potri.005G010133.5.v4.1 annot-version=v4.1 MGNDTKVSRKGKDEESNDIKGRNIGNRSSSSLGAANDTFGLRKSARETSFKKNLTPSPSSSRKSERIEKQTPPAIPSVTRKSERLVEKQSLPTPSRRPEK GKNQSSSSSSGSTKCGKSSGSLIMKEKHKKEKSVKQLETEEVGNNDKPVIKTVLVGIKRMDARAYRELFKQKQKKAKLEGSEDLIVNRTPGVDTEVKSGC KVMSSKQKRSIDDLNFDATEMVSNEDGDAAPYECGRTDSVDSCSERQRLKKRNKVSNNNTDSPSLKAALIGTSGAPVHKMSQVMPSSVGLLNTTDANHVS NFSQLTSKLSQVLKADMVGYNGGRNLHDDSEKSLHLFLKPEIAKLCEILQLPENVKVMVEQFREYVLNNHHVSREPPSLLQGFLISLCWTAASMLKHKLD HKESLALAKEHLNFSCKKDEADFVYSKLRCLRKLFLYRTGTCKVAGSPKASGFSLEDFGQNQSNGRSSLSTPSNKQKVRMEVENLRSGQEFSINQVLSHL ELAQKDYSKSIKDIEKKCDKQMRKLLQRQQEEREEFEKKYEQDKAELEHKQRTEAAVIRLHSNSSVDKLKMLDNVYAKEFEKLKRQMDMRLNNLLKLQLA TRNKLQERKAQWIEGVKSWAHAELISKPPANESGYDQENTVTLNSCSREQTPKRVQSMPDGDVPLEVTETVSSNEDVLPGVMAASKPMSDGAASSMLDQE VPLEVPQTASARDVSEDVVSVNSSPCEEQIPDLKITLGIPEANSCNDGPENSIHKSSSEDGSGRVALMVPDREFPLGVTEIVSSTGGMENSALSPSPSEG QTSARTTSCIDGREVLLEVPETAPPEAEEAVNTALDKDGVASMELGNAIEVDKQNGAVCILNQESHRDVAAVNLQNGESLLEVSENNRVNQSDEVVPSGV CETPVVGSGTTGQEKSRVCVTTLACGTGVDQQAGVLPSGGFETATVAEVGSGPTSREIDRMPAVASDSSQPTEPFRLQDRAAQFCDNWIAFQQSDASASQ PVVVSNQSPNDAPVREHTLHLLPSIDSPTSSQLTTSFAQHVPIDLIAVGGPQTHISNMRTEPVTSRISNHSATAPAVRMPVSTSQDPLQNELDRIRTETD QIIKIHEDTKLRLKSDCEKEIQEVVAQIRRTYDFKLKDLEYEFLRKKKEMDDNQSKVLMNKILAEAFRTKCKDNRASRQQEMTSGVMQQLLQPSQPSTQR PSIVTGPYSTGLPAVSLQTTPTSSLPAPPVQAVHCSALFSATPTRPPHISSISPTTSNLQVGTEIRAPAPHLQHFRPSASMSATSLSAFPSGILQHIPTT SPTLSEFPSLAPATVQQPGPRIMTNLLKSMGVFPSRTSFPRPESLMDVDNQTSTEIPSVAPATVQQSGPQIMTNLLESMGIFPSRTSLSRPESLLDVDNQ TSTDATQPCSFPPLTDLNYNINPLVQESEVVCLSDDD

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT1G08060		MOM1, MOM	MORPHEUS MOLECULE 1, MORPHEUS ...		Potri.005G010133 [exp]	0	1
AT1G08060		MOM1, MOM	MORPHEUS MOLECULE 1, MORPHEUS ...		Potri.013G006000 [exp]	2.44	0.8922	MOM.2,1
AT2G20710			Tetratricopeptide repeat (TPR)...		Potri.016G063300 [exp]	10.77	0.8516
AT1G67440		EMB1688	embryo defective 1688, Minichr...		Potri.016G023500 [exp]	11.83	0.8262
AT2G25170		CKH2, SSL2, GYM...	SUPPRESSOR OF SLR 2, GYMNOS, C...		Potri.018G021100 [exp]	13.41	0.8022	PKL.1
AT4G33210		SLOMO	SLOW MOTION, F-box family prot...		Potri.006G220900 [exp]	15.19	0.8259
AT3G47790		ABCA8, ATATH7	ATP-binding cassette A8, ABC2 ...		Potri.013G123401 [exp]	16.30	0.8449
AT5G06350			ARM repeat superfamily protein...		Potri.011G095700 [exp]	19.49	0.8474
AT2G34780		EMB1611, MEE22	EMBRYO DEFECTIVE 1611, materna...		Potri.001G463700 [exp]	19.49	0.8085
AT5G60040		NRPC1	nuclear RNA polymerase C1 (.1....		Potri.001G341900 [exp]	20.00	0.8436
AT5G47010		ATUPF1, UPF1, L...	LOW-LEVEL BETA-AMYLASE 1, RNA ...		Potri.001G148100 [exp]	21.21	0.8456

Compare expression of checked genes

Potri.005G010133 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.