Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol	CESA2.3
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G64740 1506 / 0 PRC1, IXR2, E112, CESA6 PROCUSTE 1, ISOXABEN RESISTANT 2, cellulose synthase 6 (.1) AT2G21770 1488 / 0 CESA09, CESA9 cellulose synthase A9 (.1) AT5G09870 1486 / 0 CESA5 cellulose synthase 5 (.1) AT4G39350 1477 / 0 ATH-A, CESA2, ATCESA2 cellulose synthase A2 (.1) AT4G32410 1409 / 0 AtCESA1, RSW1, CESA1 RADIALLY SWOLLEN 1, cellulose synthase 1 (.1) AT5G17420 1403 / 0 ATCESA7, MUR10, IRX3 MURUS 10, IRREGULAR XYLEM 3, CELLULOSE SYNTHASE CATALYTIC SUBUNIT 7, Cellulose synthase family protein (.1) AT5G05170 1397 / 0 IXR1, CEV1, ATH-B, ATCESA3, CESA3 ISOXABEN RESISTANT 1, CONSTITUTIVE EXPRESSION OF VSP 1, CELLULOSE SYNTHASE 3, Cellulose synthase family protein (.1) AT2G25540 1356 / 0 CESA10 cellulose synthase 10 (.1) AT5G44030 1277 / 0 IRX5, NWS2, CESA4 IRREGULAR XYLEM 5, cellulose synthase A4 (.1) AT4G18780 1198 / 0 LEW2, IRX1, ATCESA8, CESA8 LEAF WILTING 2, IRREGULAR XYLEM 1, CELLULOSE SYNTHASE 8, cellulose synthase family protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.013G019800 [exp] 1962 / 0 AT5G64740 1512 / 0.0 PROCUSTE 1, ISOXABEN RESISTANT 2, cellulose synthase 6 (.1) Potri.007G076500 [exp] 1536 / 0 AT5G64740 1790 / 0.0 PROCUSTE 1, ISOXABEN RESISTANT 2, cellulose synthase 6 (.1) Potri.005G087500 [exp] 1529 / 0 AT5G64740 1785 / 0.0 PROCUSTE 1, ISOXABEN RESISTANT 2, cellulose synthase 6 (.1) Potri.002G066600 [exp] 1514 / 0 AT4G39350 1655 / 0.0 cellulose synthase A2 (.1) Potri.005G194200 [exp] 1514 / 0 AT5G64740 1665 / 0.0 PROCUSTE 1, ISOXABEN RESISTANT 2, cellulose synthase 6 (.1) Potri.018G029400 [exp] 1457 / 0 AT4G32410 1898 / 0.0 RADIALLY SWOLLEN 1, cellulose synthase 1 (.1) Potri.006G251900 [exp] 1454 / 0 AT4G32410 1899 / 0.0 RADIALLY SWOLLEN 1, cellulose synthase 1 (.1) Potri.006G181900 [exp] 1431 / 0 AT5G17420 1730 / 0.0 MURUS 10, IRREGULAR XYLEM 3, CELLULOSE SYNTHASE CATALYTIC SUBUNIT 7, Cellulose synthase family protein (.1) Potri.018G103900 [exp] 1425 / 0 AT5G17420 1730 / 0.0 MURUS 10, IRREGULAR XYLEM 3, CELLULOSE SYNTHASE CATALYTIC SUBUNIT 7, Cellulose synthase family protein (.1)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10003526 [exp] 1511 / 0 AT5G64740 1863 / 0.0 PROCUSTE 1, ISOXABEN RESISTANT 2, cellulose synthase 6 (.1) Lus10002939 [exp] 1511 / 0 AT5G64740 1870 / 0.0 PROCUSTE 1, ISOXABEN RESISTANT 2, cellulose synthase 6 (.1) Lus10041063 [exp] 1506 / 0 AT5G64740 1868 / 0.0 PROCUSTE 1, ISOXABEN RESISTANT 2, cellulose synthase 6 (.1) Lus10028597 [exp] 1425 / 0 AT4G32410 1922 / 0.0 RADIALLY SWOLLEN 1, cellulose synthase 1 (.1) Lus10018902 [exp] 1418 / 0 AT4G32410 1915 / 0.0 RADIALLY SWOLLEN 1, cellulose synthase 1 (.1) Lus10006161 [exp] 1410 / 0 AT5G64740 1734 / 0.0 PROCUSTE 1, ISOXABEN RESISTANT 2, cellulose synthase 6 (.1) Lus10039607 [exp] 1389 / 0 AT5G05170 1820 / 0.0 ISOXABEN RESISTANT 1, CONSTITUTIVE EXPRESSION OF VSP 1, CELLULOSE SYNTHASE 3, Cellulose synthase family protein (.1) Lus10007538 [exp] 1387 / 0 AT5G05170 1772 / 0.0 ISOXABEN RESISTANT 1, CONSTITUTIVE EXPRESSION OF VSP 1, CELLULOSE SYNTHASE 3, Cellulose synthase family protein (.1) Lus10012198 [exp] 1387 / 0 AT5G05170 1774 / 0.0 ISOXABEN RESISTANT 1, CONSTITUTIVE EXPRESSION OF VSP 1, CELLULOSE SYNTHASE 3, Cellulose synthase family protein (.1) Lus10022449 [exp] 1335 / 0 AT4G18780 1286 / 0.0 LEAF WILTING 2, IRREGULAR XYLEM 1, CELLULOSE SYNTHASE 8, cellulose synthase family protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0110 [poplar] [flax] GT-A PF13632 [poplar] [flax] Glyco_trans_2_3 Glycosyl transferase family group 2 CL0229 [poplar] [flax] RING PF14569 [poplar] [flax] zf-UDP Zinc-binding RING-finger
Representative CDS sequence Show only first row Show all	>Potri.005G027600.2 pacid=42804254 polypeptide=Potri.005G027600.2.p locus=Potri.005G027600 ID=Potri.005G027600.2.v4.1 annot-version=v4.1 ATGGAAGTGAGTGCAGGCTTGGTGGCCGGCTCTCACAACAGGAATGAACTTGTTGTTATCCGTCGCGATGGAGAATTCGCTCCGAGATCGTTAGAGAGAG TGAGTAGGCAGATATGCCACATATGTGGAGATGATGTAGGGCTAACGGTGGATGGAGAGCTATTCGTGGCCTGCAATGAGTGTGCCTTCCCCATCTGTAG AACTTGTTATGAGTATGAGCGTAAAGAAGGAAATCAAGTCTGCCCTCAATGCAAGACCAGATTCAAGCGTCTCAAAGGATGTGCAAGAGTCCATGGGGAT GATGAAGAAGATGGTACTGATGATTTAGAAAATGAGTTCAATTTCGATGGAAGGAATAGCAACAGACATGATATGCAGCACCATGGTGGACCTGAATCTA TGCTTCACTATGATCCCGATTTGCCTCACGACCTTCATCATCCTTTGCCCCGAGTCCCTCTCCTTACTAATGGTCAAATGGTTGATGACATTCCTCCTGA ACAACATGCTTTGGTCCCTTCATACATGGCTCCTGTCGGTGGTGACGGGAAAAGGATTCACCCCCTTCCCTTTTCAGATTCTTCTCTTCCTGCACAACCA AGATCGTTGGATCCTTCCAAGGACTTGGCTGCTTATGGTTATGGAAGTATTGCTTGGAAGGAAAGGATGGAGAGCTGGAAGCAAAAACAGGACAAACTGC AGATAATGAAGCGTGAAAATGGAGACTATGATGATGATGACCCCGATCTCCCATTAATGGATGAGGCAAGGCAACCACTATCGCGAAAGATGCCTATTCC GTCCAGTCAAATCAATCCTTACCGAATGATCATCATTATTCGACTCGTAGTTCTTGGGTTCTTCTTCCATTATCGAGTCACACACCCTGTGAATGATGCG TTTGCGTTGTGGCTCATATCTGTGATCTGTGAGATTTGGTTTGCTGTTTCATGGATACTTGATCAATTCCCAAAGTGGCTCCCTATTGACAGGGAAACTT ATCTGGATAGATTATCTCTGAGGTATGAGAAGGAAGGCCAGCCTTCTCAGCTTTCTCCAGTTGACATATATGTAAGTACAGTTGATCCATTAAAAGAGCC CCCTCTGGTGACTGCAAACACAGTTCTGTCCATTCTTGCAGTGGATTACCCTGTTGACAAGATTTCATGTTATGTTTCTGATGATGGTGCTGCTATGCTG ACATTTGAGGCATTGTCAGAAACATCTGAATTTGCAAAGAAATGGGTCCCCTTCTGTAAGAAATTTAGCATTGAACCTCGGGCACCCGAGTTCTATTTTG CTCAAAAGATAGATTATCTCAAAGATAAGGTTGATGCTTCATTTGTTAAGGAAAGAAGAGCAATGAAGAGAGAGTATGAAGAGTTTAAGGTTCGGGTCAA CGCTTTGGTTGCCAAGGCACATAAGGTCCCGGAAGATGGATGGACAATGCAGGATGGTACTCCATGGCCTGGGAATAATGTTCGTGATCACCCTGGAATG ATTCAGGTTTTCCTAGGCCAAAGTGGAGGGCATGACACAGATGGAAATGAATTACCACGTCTGGTATATGTTTCCAGAGAAAAGAGACCTGGATTTAATC ACCACAAAAAGGCTGGGGCCATGAATGCTTTGGTCAGGGTCTCTGCCGTGCTATCAAATGCACGTTATCTTTTGAATTTGGATTGTGATCACTACATCAA TAACAGTAAGGCTCTTAGAGAATCAATGTGTTTCATGATGGATCCATTGCTTGGAAAGAGAGTGTGCTATGTCCAGTTCCCACAGAGGTTTGATGGCATT GACAGGAATGATCGATATGCAAACCGGAACACTGTATTCTTTGATATCAATATGAAAGGTTTGGATGGCATTCAAGGACCTATATATGTAGGGACTGGAT GTGTTTTCAGAAGGCACGCGCTTTATGGTTATGATGCTCCAAAAACAAAGAAACCACCAACGAGGACATGCAACTGCTTGCCTAAGTGGTGCTGTGGATG CTTTTGTTCAGGAAGGAAAAAGAAGAAGAAGACAAACAAACCTAAGTCCGAGTTAAAGAAGAGGAACTCTAGAACATTTGCACCTGTGGGTACTTTGGAG GGTATTGAAGAGGGCATTGAAGGAATTGAAACCGAAAACATGGCTGTAACATCTGAGAAGAAATTGGAAAATAAGTTTGGACAATCCTCGGTGTTTGTAG CATCTACCCTACTAGAGGATGGCGGCACACTGAAAAGTGCCAGCCCTGCATCCCTGCTCAAAGAAGCCATCCATGTCATTAGCTGTGGCTACGAAGATAA AACAGAATGGGGCAAAGAGGTAGGGTGGATTTATGGTTCAGTTACGGAGGATATATTGACAGGCTTTAAAATGCATTGTCATGGATGGAGATCAATATAT TGTATTCCTGCTAGGCCAGCATTTAAAGGTTCGGCGCCCATTAATCTTTCTGATCGTCTACACCAGGTCCTTCGATGGGCTCTTGGATCTGTTGAGATAT TTTTGAGCAGGCACTGTCCTCTTTGGTATGGATATGGAGGGGGGTTGAAGTGGTTGGAGCGTCTGTCTTACATAAACGCTACTGTTTATCCTTTGACATC TATTCCTCTACTGGCATATTGTACTCTTCCTGCAGTGTGCTTGCTTACCGGGAAATTTATCACTCCAGAGCTCAGCAATGCTGCCAGCTTGTGGTTTCTG TCTCTTTTCATTTGTATTTTCGCAACAAGTATTCTGGAAATGAGATGGAGTGGAGTTGGTATCGATGAATGGTGGAGAAACGAACAATTTTGGGTGATTG GAGGAGTATCAGCGCATCTATTTGCAGTATTCCAGGGGCTTTTAAAGGTTCTAGCTGGTGTTGATACGAACTTTACTGTGACGTCTAAAGGAGGAGATGA CGATGAGTTCTCAGAGCTGTACGCATTTAAGTGGACCACGTTACTCATCCCACCAACAACATTGCTGATAATAAACCTGGTTGGAGTCGTGGCTGGTGTC TCAAATGCTATAAACAATGGCTACGAGTCATGGGGGCCTTTGTTTGGTAAGCTTTTCTTTGCATTCTGGGTGATAGTTCACCTGTACCCTTTCCTGAAAG GTTTACTCGGCCGACAGAACAGAACTCCCACAATCATTATTGTCTGGTCAATTTTGCTTGCTTCAATCTTCTCTCTTTTGTGGGTTCGGATCGATCCATT CTTGGCCAAGTCCAATGGCCCACTTCTGGAGGAATGTGGATTGGACTGTAATTAA
AA sequence Show only first row Show all	>Potri.005G027600.2 pacid=42804254 polypeptide=Potri.005G027600.2.p locus=Potri.005G027600 ID=Potri.005G027600.2.v4.1 annot-version=v4.1 MEVSAGLVAGSHNRNELVVIRRDGEFAPRSLERVSRQICHICGDDVGLTVDGELFVACNECAFPICRTCYEYERKEGNQVCPQCKTRFKRLKGCARVHGD DEEDGTDDLENEFNFDGRNSNRHDMQHHGGPESMLHYDPDLPHDLHHPLPRVPLLTNGQMVDDIPPEQHALVPSYMAPVGGDGKRIHPLPFSDSSLPAQP RSLDPSKDLAAYGYGSIAWKERMESWKQKQDKLQIMKRENGDYDDDDPDLPLMDEARQPLSRKMPIPSSQINPYRMIIIIRLVVLGFFFHYRVTHPVNDA FALWLISVICEIWFAVSWILDQFPKWLPIDRETYLDRLSLRYEKEGQPSQLSPVDIYVSTVDPLKEPPLVTANTVLSILAVDYPVDKISCYVSDDGAAML TFEALSETSEFAKKWVPFCKKFSIEPRAPEFYFAQKIDYLKDKVDASFVKERRAMKREYEEFKVRVNALVAKAHKVPEDGWTMQDGTPWPGNNVRDHPGM IQVFLGQSGGHDTDGNELPRLVYVSREKRPGFNHHKKAGAMNALVRVSAVLSNARYLLNLDCDHYINNSKALRESMCFMMDPLLGKRVCYVQFPQRFDGI DRNDRYANRNTVFFDINMKGLDGIQGPIYVGTGCVFRRHALYGYDAPKTKKPPTRTCNCLPKWCCGCFCSGRKKKKKTNKPKSELKKRNSRTFAPVGTLE GIEEGIEGIETENMAVTSEKKLENKFGQSSVFVASTLLEDGGTLKSASPASLLKEAIHVISCGYEDKTEWGKEVGWIYGSVTEDILTGFKMHCHGWRSIY CIPARPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPLWYGYGGGLKWLERLSYINATVYPLTSIPLLAYCTLPAVCLLTGKFITPELSNAASLWFL SLFICIFATSILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGVDTNFTVTSKGGDDDEFSELYAFKWTTLLIPPTTLLIINLVGVVAGV SNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGLLGRQNRTPTIIIVWSILLASIFSLLWVRIDPFLAKSNGPLLEECGLDCN

---

DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

---

Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT5G64740		PRC1, IXR2, E11...	PROCUSTE 1, ISOXABEN RESISTANT...		Potri.005G027600 [exp]	0	1	CESA2.3
					Potri.010G223733 [exp]	2.44	0.8784
AT3G59030		ATTT12, TT12	TRANSPARENT TESTA 12, A. THALI...		Potri.002G055100 [exp]	2.82	0.8578
AT1G22640	MYB	AtMYB3	ARABIDOPSIS THALIANA MYB DOMA...		Potri.015G041100 [exp]	3.87	0.8689	Pt-MYB.36
AT3G59030		ATTT12, TT12	TRANSPARENT TESTA 12, A. THALI...		Potri.005G207600 [exp]	4.00	0.8731
AT4G24730			Calcineurin-like metallo-phosp...		Potri.012G089300 [exp]	4.58	0.8176	WR3.1
AT1G69450			Early-responsive to dehydratio...		Potri.010G164100 [exp]	5.91	0.8402
AT3G49290		ABIL2	ABL interactor-like protein 2 ...		Potri.003G142800 [exp]	7.74	0.8025
					Potri.019G036450 [exp]	7.74	0.8072
AT4G32140			EamA-like transporter family (...		Potri.006G266400 [exp]	10.09	0.7920
AT3G23000		PKS7, ATSRPK1, ...	SNF1-RELATED PROTEIN KINASE 3....		Potri.008G160200 [exp]	10.77	0.7812	CIPK4.1

Compare expression of checked genes

Potri.005G027600 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.