Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT4G27220 256 / 4e-70 NB-ARC domain-containing disease resistance protein (.1) AT4G27190 256 / 1e-69 NB-ARC domain-containing disease resistance protein (.1) AT4G26090 190 / 1e-48 RPS2 RESISTANT TO P. SYRINGAE 2, NB-ARC domain-containing disease resistance protein (.1) AT1G12280 181 / 7e-46 LRR and NB-ARC domains-containing disease resistance protein (.1) AT1G12220 175 / 6e-44 RPS5 RESISTANT TO P. SYRINGAE 5, Disease resistance protein (CC-NBS-LRR class) family (.1), Disease resistance protein (CC-NBS-LRR class) family (.2) AT1G61190 174 / 1e-43 LRR and NB-ARC domains-containing disease resistance protein (.1) AT5G63020 170 / 2e-42 Disease resistance protein (CC-NBS-LRR class) family (.1) AT1G61310 169 / 5e-42 LRR and NB-ARC domains-containing disease resistance protein (.1) AT1G51480 167 / 2e-41 Disease resistance protein (CC-NBS-LRR class) family (.1) AT1G61180 166 / 3e-41 LRR and NB-ARC domains-containing disease resistance protein (.1.2)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.005G061860 [exp] 4808 / 0 AT4G27220 230 / 1e-61 NB-ARC domain-containing disease resistance protein (.1) Potri.013G027300 [exp] 2599 / 0 AT4G27190 244 / 8e-66 NB-ARC domain-containing disease resistance protein (.1) Potri.019G036875 [exp] 1715 / 0 AT4G27190 178 / 9e-45 NB-ARC domain-containing disease resistance protein (.1) Potri.013G015700 [exp] 1217 / 0 AT4G27190 257 / 2e-70 NB-ARC domain-containing disease resistance protein (.1) Potri.005G042900 [exp] 1202 / 0 AT4G27190 240 / 7e-65 NB-ARC domain-containing disease resistance protein (.1) Potri.005G042400 [exp] 1199 / 0 AT4G27220 234 / 4e-63 NB-ARC domain-containing disease resistance protein (.1) Potri.005G041101 [exp] 1197 / 0 AT4G27220 229 / 2e-61 NB-ARC domain-containing disease resistance protein (.1) Potri.013G015900 [exp] 1161 / 0 AT4G27190 268 / 5e-74 NB-ARC domain-containing disease resistance protein (.1) Potri.001G422800 [exp] 491 / 7e-142 AT4G27190 282 / 2e-78 NB-ARC domain-containing disease resistance protein (.1)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10039509 [exp] 120 / 9e-27 AT3G14460 613 / 0.0 LRR and NB-ARC domains-containing disease resistance protein (.1) Lus10039540 [exp] 120 / 1e-26 AT3G14470 727 / 0.0 NB-ARC domain-containing disease resistance protein (.1) Lus10007261 [exp] 116 / 3e-25 AT3G14460 654 / 0.0 LRR and NB-ARC domains-containing disease resistance protein (.1) Lus10024173 [exp] 107 / 1e-22 AT3G14460 681 / 0.0 LRR and NB-ARC domains-containing disease resistance protein (.1) Lus10020016 [exp] 105 / 5e-22 AT3G07040 563 / 0.0 RESISTANCE TO PSEUDOMONAS SYRINGAE 3, RESISTANCE TO P. SYRINGAE PV MACULICOLA 1, NB-ARC domain-containing disease resistance protein (.1) Lus10026132 [exp] 103 / 1e-21 AT3G14460 594 / 0.0 LRR and NB-ARC domains-containing disease resistance protein (.1) Lus10018937 [exp] 102 / 3e-21 AT3G07040 587 / 0.0 RESISTANCE TO PSEUDOMONAS SYRINGAE 3, RESISTANCE TO P. SYRINGAE PV MACULICOLA 1, NB-ARC domain-containing disease resistance protein (.1) Lus10022351 [exp] 100 / 2e-20 AT3G14470 369 / 1e-108 NB-ARC domain-containing disease resistance protein (.1) Lus10028639 [exp] 97 / 1e-19 AT3G07040 579 / 0.0 RESISTANCE TO PSEUDOMONAS SYRINGAE 3, RESISTANCE TO P. SYRINGAE PV MACULICOLA 1, NB-ARC domain-containing disease resistance protein (.1) Lus10002945 [exp] 96 / 3e-19 AT3G07040 580 / 0.0 RESISTANCE TO PSEUDOMONAS SYRINGAE 3, RESISTANCE TO P. SYRINGAE PV MACULICOLA 1, NB-ARC domain-containing disease resistance protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0023 [poplar] [flax] P-loop_NTPase PF05729 [poplar] [flax] NACHT NACHT domain
Representative CDS sequence Show only first row Show all	>Potri.005G062130.1 pacid=42803359 polypeptide=Potri.005G062130.1.p locus=Potri.005G062130 ID=Potri.005G062130.1.v4.1 annot-version=v4.1 ATGGTTCTGGAAAACATTATTTCCATCATTGACGTTGTTTCCCACCACACTGTTGTTCCAATTGCACGTGAGATCAATTATTGTTTCAAATACAATAACA ACTCTGAAAATCTGAAGAGGGAAGTCAAGAAGTTGAAAAGTGCCCAGCTGAGGGTGCGCCATTCAGTTGACGATGCCAGAAACAATGGGGAAGCAATTCT TGAGGATGTTATAGAGTGGCTATCTCTTGCGGAAAAAGCTACAGAAAAAGTGGAGAGGAAGATTTCTGAAGATGAAGATAGAGCGAGAAAGAAGTGCTTC ATCGGATTGTGTCCGGATCTCAAGGCACGATACCAGTGTAGCAAGAAAGCAAAGGCGGAAACACGCTTTGTTGCCAACCTCCTAGATGAAAGAGATGGTT TCAGCACAGTTTCCCATCGAGCTGCTCCAAAAGGGATGGAAGCTATATCTTTCAGAAGTTATGACGTCATGCCATCAAGAACACCCGTTTTGAAGGAAAT TATGAATGCCTTAACAACTGCTGATGTGAACATGGTTGGGGTGTATGGAATGCGTGGTATGGGGAAGACAGTGCTGGTAAAAGAGGCTGCTAGACAAGCT GTTCAGGAGAAATTATTTAACCAGGTAGTGTTTGCCACTATAACCCAAACCCCAGACATCAAGAAAATTCAAGGGCAGATTGCAGACCAGCTTTGTCTAA AATTTGATGAGGAAAGTGAATGTGGTAGAGCTGGTCGATTGCGCCAGAGGTTGAAACAAGAGCAGAAAATTCTTATTATTCTAGACGATTTGTGGAAGAG TCTTGATTTAGAAGCAGTTGGGATTCCACTCAAGGATGAACACGAAGGATGCAAGATGCTGCTAACATCGAGGGTATTTGATGTTTTATCTAGTGGAATG GATATTCAAAAGAACTTTCCCATCAATGCTTTATCTGAAGAAGAAACGTGGGAGTTCTTCAAAAAGATGGCAGGTGATCGCATTGAACATCCAGATTTGC AATCCTTGGCAATGGAGGTGGCCAAAAAGTGTGCAGGTTTACCACTGGCCATTGTAACTGTTGCAAGAGCTCTGAAGAACAAGAACTTGTCCCAGTGGAA GAATGCATTAAGGGAACTAAAGAGACCATCTCCAAGAAACTTCGCAGGAGTGCAGGAAGATGTGTATGCGGCTATAGAACTAAGTTATAATCATCTTGAA AGTAAGGAGTTAAAATCAACTTTTCTTCTTTGTAGTCGAATGGGTTATAATGCATCCACTCGCGACTTGTTGAAATATGGTATGGGTTTGGGCTTGTTTT CTGGCTTTGTTACAGTTGAAGAAGCACAAGACAGAGTGCAATCGTTGGTTCATAAACTCAAGGCCTCTGGATTGTTGCTAGACAATCATTGCGATTGGCA ATTTTCTATGCATGATCCTGTGCGTGATGTTGCTCTATCAATTGCTTTGAGAGACTGCCACGTATTTGTAGGGGGTGATCAGTTTGAACCAGAATGGTCT GCTAAGAATATGTTAAAGAAGTATAAAGAAATTTGGTTAAGTTCTAATATCGAGCTTCTTAGAGAGATGGAGTACCCACAACTTAAATTTTTACATATAA GGAGTGAGGATCCTTCTCTAGAAATAAGCAGCAACATATGTAGAGGAATGCACAAACTGAAAGTCTTAGTATTGACTAACATTTCTTTTGTGTCTTTGCC TTCATCTCTTCATTTCCTAAAAAACCTTCGAACTTTGTGTCTTCATCAATCTTCATTGGGAGAGATAGCTGACATTGGGGAGCTGAAGAAATTGGAAATT CTCAGCTTTGCCAAATCTAATATTAAGCATTTGCCAAGACAAATAGGGCGGTTGACTGAGCTGAGAATGTTGGATTTGAGTGATTGTTTTGAACTTGAAG TAATTCCACCAAATATCCTCTCAAACTTGTCCATGCTAGAAGAATTGTGTATGGGAAACAGCTTCCATCATTGGGCTACTGAAGGGGAGGACAATGCCAG TCTTGTTGAGTTGGATCATTTGCCTCACTTGACAAATTTGGACATTCATGTTCTAGATTCTCATGTTATGTCAAAAGGCATGCTCTCTAAAAGATTAGAA AGATTCAGAATATTTATTGGAGATGTTTGGGATTGGGATGGTGTTTATCAGAGCTTGAGAACATTGAAGCTCAAGCTCAACACAAGCGCCAATCATTTGG AGCATGGTGTGCTAATGTTGTTGAAGAGAACTCAAGATTTGTATTTACTTGAACTAAAGGGTGTTAATAATGTCGTCTCTGAAATGGACACGGAAGGATT TCTACAACTGCGGCACCTCCATCTCCACAATAGTTCTGATATTCAATATATTATTAACACTAGCAGCGAGGTTCCTTCTCATGTCTTCCCTGTGTTGGAG TCTTTGTTTCTCTACAATTTGGTATCCTTGGAGAAACTTTGCCATGGCATTCTCACAGCAGAGTCTTTCAGGAAACTAACAATCATAGAAGTGGGGAACT GTGTTAAATTGAAGCATCTCTTCCCATTCTCCATTGCACGAGGACTTTCGCAACTTCAAACCATCAATATTTCATCTTGCCTAACCATGGAAGAGATTGT TGCTGAGGAAGGTGATGAATTTGAGGACTCTCATACAGCAATTGATGTGATGGAGTTCAATCAATTGAGCTCACTATCGCTTCGGTGTTTGCCGCATCTC AAAAACTTTTTCTCCAGAGAGAAGACATCTCGTCTCTGTCAAGCACAACCGAATACAGTGGCAACTAGCGTGGGATTGCAATCTAAGGAAATTTCAGAGG ATGAGCTGAGAAATCCTCTCCAGCTTTTCTGTGAAAAGATTCTTGTCCCGAAACTGAAGAAGCTGGAATTGGTCTCTATCAACGTTGAAAAGATATGGCA TGGCCAGCTTCACCGGGAAAATGCATTTCCTGTTCAAAATTTAATGACATTAGTTGTGGATGATTGCCACAGCCTGAAATATCTGTTTTCTCCTTCCATG GTTAAAAATCTTGTGCTACTCAAGCATCTTACTGTACGTTATTGCAAGTCCATGGAAGAGATAATATCTGTGGAAGGATTGGAAGAAGGAGAAATGATGA GCGAGATGTGCTTTGATAAACTGGAAGATGTTGAGCTCTCTGATCTTCCAAGACTCACACGGTTCTGTGCTGGCACACTGATCGAGTGTAAAGTTTTGAA ACAACTGCGCATTTGTTCTTGCCCTGAATTTAAGACATTCATCTCCTGCCCCGATAGCGCGAACATGACAGTTGACGTTGAACCTGGAGAAGTGCATTAT TCAAGGGAGAGTGACCACAATGCCGTGCAGCCTCTCTTTGATGAAAAGGTTGCATTCCCTAGCCTAGCTGAAATCAAAATTTCCAACATAGAGAACTTAG AAAAGATGTGGCACAACCAGCTTGCTGAAGATTCCTTTTGTCAACTACGATCAGTAACAATTTCTAGCTGTAAAAGGCTAGTGAGGGTTTTCCCATCAAT TTTGCTAGAAACATTCCGGATGGTAGAGATGTTGGATATCAGTCATTGTCCTTTGTTAGAAGAGATCTTTGACCTTGAAGAAACTAGTGCATCTGGTTCC CTTCAGTTAAGAGACTTGTCCTTGATTGGACTAGGCAAACTGAAGCATATATGGAATAAAGATCCTCAAGGAACACTCAGCTTCCAAAATCTACATGCAT TAAAGGTTTCTGATTGTAATGTATTGAAGAATCTGTTTCCATTCTCTATAGCTAGAGAACTTGTGCAACTAGAAAAACTCGAGATAGAGCATTGTGGGAA ACTGGAGGAAATTATTGTGAAGGTGGACCATGGTGAAGCAGCCCATTGTTTTGTGTTTCCGCAGCTAACCTCTTTGAAACTTCAAGAATTACCAGAATTC AGGAACTTATATCCAGGGAAACATACTTGGAAATCTCCCATGTTAAAAAGGTTGGCGGTGTCTAACTGCTGCAATGTAGCATTATTCGGCTCCAAATTTC TTAAATCTCAAGAAACTCAAGGGGAAGTCCAACTTGGTATCCCGGCTCAACAACCTCTCTTCTTCGTCGAAAAGGTGATCTGCAACCTGGAGGAATTGTC ATTAGGCGGCAAGAACACAACAGCTTCGATCATCTGGCATCGCCAACTTCCAATAGAGTTATATTCCTCATTGAAAGTTCTAAAGTTACACCATTTTGGT GTTAAATCAGATCCTATCTCATTTGATTTCGTTTCAAGATTACGGAATCTTGAAACACTATCCGTGACACATAGTTCTTTCAAAAAGCTATTCCTGTACA AAGGGCATAGTTCATTCAAAAAGCTACCATCGATCGGAGAAGTTGGTGGTGAAGAGGGACGTGCACTTGCACGATTAAAAAATTTAACAATACATGCAGT TCATGATATAAAACATATATGCAAGCAATACCACCTGCTAGCTCCCATTCTTCACAATCTTAAAACTCTCAAAGTAGAGGATTGTCACAGTTTTGTCAGT TTAGCACCATCTTATGTGTGCTTTCAAAATTTAACAACTCTGGATATACAGTCTTGCCTTGGATTATTGAACTTGTTTACATCATCAACGGCTAAAAGTC TTGTGCAACTTGTTAAGTTGACCATAGCTCATTGCAAAAAAATGACAGTAGTGGTGGCAAGACAGGGAGGAGATGAAGCTGATGATGAGATCATTTTCAG CAAACTAGAATATTTGGAACTTCTAGATTTACAGAATCTCACAAGCTTCTGCTTTGAAAATTATGCCTTCAGATTTCCATCATTGAAAGAAATGGTTGTC GAAGAATGTCCTAATATGAAAAGTTTCTCTCCAGGAGTGTTAAGCACGCCAAAGCTGCAGGGAGTACACTGGAAAAAGTATTCTAAGAACACAGTGCATT GGCATGGTAATCTTGATATTACCATACAACACTTATACACAGAAATGGTTGGATTTGATGGAGTAAAGAGGCTGAAGGTCTCTGACTTTCCTCAATTGAA AAAGAGATGGCATTGCCAGCTTCCTTTCAACTTCTTCAGCAATTTAACAAGCCTCACGGTAGATGAATACTGTTACTCGCTCGATGCTTTACCGTCCACT CTGCTACAGTTTATGAACGATTTGCTAGAACTGCAAGTGAGAAACTGTGATTTACTAGAAGGGGTATTTGATTTGAAAGGGCTTGGTCCAGAGGAAGGGA GGGTTTGGTTACCCTGTTTATATGAATTGAACTTGATTGGATTATCAAGTTTGAGACATATATGTAACACAGATCCTCAAGGAATTCTGGAATTCAGAAA CCTTAATTTTCTAGAAGTTCATGACTGTAGCAGCTTGATAAATATATTTACACCATCGATGGCATTGAGCCTTGTGCATCTCCAGAAGATTGTAATAAGA AACTGTGACAAGATGGAAGAAATCATCACCAAGGAGAGAGCTGGGGAAGAAGAAGCAATGAATAAAATCATCTTTCCTGTACTAAAAGTGATCATTCTCG AGTCTTTACCTGAGTTAAGCAATATCTACTCTGGAAGTGGTGTTCTGAATCTTACATCGTTAGAAGAGATTTGCATAGATGATTGTCCAAATATGAAGAT CTTCATCTCCTCCCTTGTAGAGGAACCGGAGCCTAATTCAGTTGGTAAAGGAAAAGAGCAGAGGCAAGGTCAGGGAGGCAATTATAATTTCACTGCACTT CTCAACTATAAGGTTGCATTTCCAGAATTGAAAAAATTGAGAGTGGATTGGAATACTATCATGGAGGTGACACAGCGTGGCCAATTTCGGACCGAGTTCT TCTGCCGACTAAAGGTTCTTGAACTCGTCCACTTTCCTATTGATTGTGTTGATTTTCCATCCTGGTTCCTTCAGAGATTCAACATTTTAGAGAGCCTTGT TGTGTGTGATGCTTCTTTCGAAGAAATAGTCCGGCTTGAAGAGATGAGTAGCAGGCCGAACCAGGTCTTTGCTCAGCTAAGAGTATTGGAGCTGTCTAAG CTGCCGGAACTCATGCATCTGTCGAAAGAACGCTCGCAGGCATGTCAAATTTTCCAAAATCTAGAAATTCTTCGAGTATCTGAATGTGGCACACTGAAAA CTTTAATTCCAATGTCGGTATCTTTCCGATGCCTGATGACTTTGGAAGTCTCAAAATGTAATGGGCTAGCAAGTTTGATGTCTTCCTCAACAGCTAAAAA TCTTGTGCAACTCACTAGCATGACTGTAGTCGAATGTGAAACGATTGAAGTAGTAGTTGCAAACGAAGAAAATGAAGCAGAAAATGAGATCGTTTTTCAT AAATTGGAAAATTTGGCATTTCACTGCTTACCAAGCCTCACAAGCTTCTACATGCAAAACTGTGCATTGATGTTTCCTTCATTGGAGAGAGTATTCATAG ATCAGTGCCCGAAGATGGAATTGTTTTCACGGGGAGTCATAAACACCCCAAAGCTAGAGAGAGTACAATTAACAGAAGGAGACAGCACAGGATTCTGGAA GGATGACCTTAATTTGACTATACATAACTTGTTCGTGAAGAAGTCCAAATTGCCAAGCTCATCTAGGCAGCCCAGCTTAGCCCGTGAGACAACTGCAGCA CATAAAAATCAAATGTATGCTGTCTCTGAAGGACCAGCTTCTGAGAATTTGCACGTGAATGAGAATCCAGATGCTGGAAAAGATTCCCATCCTGTCATCG AAACAAGCACTAATCTTGTTATCAAAGAACAGGCCATGAGAAATGGATTGATGAAACCAGGCCCTCAAGTGACCTCAATATACCAAGATTCCCAGGCAAC TTTGAATGATAAGGAGGATCGTGAACAAGGTCAGAGTCCCCTAGCTCCCATTGACATTGAAGCTCCCATCTCTCAGCAAGTTCAAAATGATTCTCAAGCA ACTGACGAGAAGGAATTTCGACAAGACCAATTTATGACTGCTTCTTCAAGTCAGCAAAAAAACATTGTTCTTGTATCTCCTCCCAGTGCTGGAGAACAAT CTCTTGCATCAACTTCTGCATCTTCAACCAATGAAACCTCCACTCAGAAGCTCGCATCTCACACTTCCTCGAGAGAAACTTCAGAAACAATTACAGGAAT CGAGTCTCTATTTGCTACCATGGAACAATTGGTCAGACCATGTCCTGTGTCTTCTTCGCAGCCTGAATCAAGTGCAAATACACATGCTGAATCTTATGAG TCTGATGTTGGGAGCCCCGAGAGTCATGTCTACTCTATGGGTTTGATAAAGAAAATCTTATTGAAACCCCTGACGGAAGTAGCAAGATCACCTGATGGCC TCCTGTTGCTAGCTACAATGAAGAATCTAAAGAAAAGCGATCTCCTAAATTCTCAGCAGTTACAAATCATTCAAGCTTACATTGACAATTTTGATAGTCT AGTGTCCAACTACCCATTGTACGAGCACCAAATTGATAGGACAAGTGCACTGAAATATTCCATTGAAGATAAGAAAAAAGGAATTTCTGACCTCAAGAAC CATTACGGAGATCTTATCCACAATGCAAGCAGTCTTGCTGCAGAGAGGGAAGCATTGAAAAAGAGACTTGATGAGATTGCGGACGAAGAAATTCACATCC GAGAAGATGCAGACGATCTCCGTACACAGCTGATCAGTTGGAAAGCTGAACTAGAAACGCACATGAAAGCTCTTCCAGAAGCTTTGAGACAAGAAAATGA AGCTGATAATAGAGCCAACAATTCCAATGAGTATTGGGGTAAGATTCGAAGCTTATTTGCTTGA
AA sequence Show only first row Show all	>Potri.005G062130.1 pacid=42803359 polypeptide=Potri.005G062130.1.p locus=Potri.005G062130 ID=Potri.005G062130.1.v4.1 annot-version=v4.1 MVLENIISIIDVVSHHTVVPIAREINYCFKYNNNSENLKREVKKLKSAQLRVRHSVDDARNNGEAILEDVIEWLSLAEKATEKVERKISEDEDRARKKCF IGLCPDLKARYQCSKKAKAETRFVANLLDERDGFSTVSHRAAPKGMEAISFRSYDVMPSRTPVLKEIMNALTTADVNMVGVYGMRGMGKTVLVKEAARQA VQEKLFNQVVFATITQTPDIKKIQGQIADQLCLKFDEESECGRAGRLRQRLKQEQKILIILDDLWKSLDLEAVGIPLKDEHEGCKMLLTSRVFDVLSSGM DIQKNFPINALSEEETWEFFKKMAGDRIEHPDLQSLAMEVAKKCAGLPLAIVTVARALKNKNLSQWKNALRELKRPSPRNFAGVQEDVYAAIELSYNHLE SKELKSTFLLCSRMGYNASTRDLLKYGMGLGLFSGFVTVEEAQDRVQSLVHKLKASGLLLDNHCDWQFSMHDPVRDVALSIALRDCHVFVGGDQFEPEWS AKNMLKKYKEIWLSSNIELLREMEYPQLKFLHIRSEDPSLEISSNICRGMHKLKVLVLTNISFVSLPSSLHFLKNLRTLCLHQSSLGEIADIGELKKLEI LSFAKSNIKHLPRQIGRLTELRMLDLSDCFELEVIPPNILSNLSMLEELCMGNSFHHWATEGEDNASLVELDHLPHLTNLDIHVLDSHVMSKGMLSKRLE RFRIFIGDVWDWDGVYQSLRTLKLKLNTSANHLEHGVLMLLKRTQDLYLLELKGVNNVVSEMDTEGFLQLRHLHLHNSSDIQYIINTSSEVPSHVFPVLE SLFLYNLVSLEKLCHGILTAESFRKLTIIEVGNCVKLKHLFPFSIARGLSQLQTINISSCLTMEEIVAEEGDEFEDSHTAIDVMEFNQLSSLSLRCLPHL KNFFSREKTSRLCQAQPNTVATSVGLQSKEISEDELRNPLQLFCEKILVPKLKKLELVSINVEKIWHGQLHRENAFPVQNLMTLVVDDCHSLKYLFSPSM VKNLVLLKHLTVRYCKSMEEIISVEGLEEGEMMSEMCFDKLEDVELSDLPRLTRFCAGTLIECKVLKQLRICSCPEFKTFISCPDSANMTVDVEPGEVHY SRESDHNAVQPLFDEKVAFPSLAEIKISNIENLEKMWHNQLAEDSFCQLRSVTISSCKRLVRVFPSILLETFRMVEMLDISHCPLLEEIFDLEETSASGS LQLRDLSLIGLGKLKHIWNKDPQGTLSFQNLHALKVSDCNVLKNLFPFSIARELVQLEKLEIEHCGKLEEIIVKVDHGEAAHCFVFPQLTSLKLQELPEF RNLYPGKHTWKSPMLKRLAVSNCCNVALFGSKFLKSQETQGEVQLGIPAQQPLFFVEKVICNLEELSLGGKNTTASIIWHRQLPIELYSSLKVLKLHHFG VKSDPISFDFVSRLRNLETLSVTHSSFKKLFLYKGHSSFKKLPSIGEVGGEEGRALARLKNLTIHAVHDIKHICKQYHLLAPILHNLKTLKVEDCHSFVS LAPSYVCFQNLTTLDIQSCLGLLNLFTSSTAKSLVQLVKLTIAHCKKMTVVVARQGGDEADDEIIFSKLEYLELLDLQNLTSFCFENYAFRFPSLKEMVV EECPNMKSFSPGVLSTPKLQGVHWKKYSKNTVHWHGNLDITIQHLYTEMVGFDGVKRLKVSDFPQLKKRWHCQLPFNFFSNLTSLTVDEYCYSLDALPST LLQFMNDLLELQVRNCDLLEGVFDLKGLGPEEGRVWLPCLYELNLIGLSSLRHICNTDPQGILEFRNLNFLEVHDCSSLINIFTPSMALSLVHLQKIVIR NCDKMEEIITKERAGEEEAMNKIIFPVLKVIILESLPELSNIYSGSGVLNLTSLEEICIDDCPNMKIFISSLVEEPEPNSVGKGKEQRQGQGGNYNFTAL LNYKVAFPELKKLRVDWNTIMEVTQRGQFRTEFFCRLKVLELVHFPIDCVDFPSWFLQRFNILESLVVCDASFEEIVRLEEMSSRPNQVFAQLRVLELSK LPELMHLSKERSQACQIFQNLEILRVSECGTLKTLIPMSVSFRCLMTLEVSKCNGLASLMSSSTAKNLVQLTSMTVVECETIEVVVANEENEAENEIVFH KLENLAFHCLPSLTSFYMQNCALMFPSLERVFIDQCPKMELFSRGVINTPKLERVQLTEGDSTGFWKDDLNLTIHNLFVKKSKLPSSSRQPSLARETTAA HKNQMYAVSEGPASENLHVNENPDAGKDSHPVIETSTNLVIKEQAMRNGLMKPGPQVTSIYQDSQATLNDKEDREQGQSPLAPIDIEAPISQQVQNDSQA TDEKEFRQDQFMTASSSQQKNIVLVSPPSAGEQSLASTSASSTNETSTQKLASHTSSRETSETITGIESLFATMEQLVRPCPVSSSQPESSANTHAESYE SDVGSPESHVYSMGLIKKILLKPLTEVARSPDGLLLLATMKNLKKSDLLNSQQLQIIQAYIDNFDSLVSNYPLYEHQIDRTSALKYSIEDKKKGISDLKN HYGDLIHNASSLAAEREALKKRLDEIADEEIHIREDADDLRTQLISWKAELETHMKALPEALRQENEADNRANNSNEYWGKIRSLFA

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT4G27220			NB-ARC domain-containing disea...		Potri.005G062130 [exp]	0	1
AT4G27220			NB-ARC domain-containing disea...		Potri.005G061860 [exp]	3.46	0.8565
AT3G53810			Concanavalin A-like lectin pro...		Potri.009G035701 [exp]	12.96	0.7154
AT1G09420		G6PD4	glucose-6-phosphate dehydrogen...		Potri.005G005866 [exp]	13.26	0.7101
AT2G29970			Double Clp-N motif-containing ...		Potri.008G069100 [exp]	13.85	0.7455
AT4G37940	MADS	AGL21	AGAMOUS-like 21 (.1)		Potri.001G284600 [exp]	16.24	0.7052
AT4G37940	MADS	AGL21	AGAMOUS-like 21 (.1)		Potri.001G284301 [exp]	17.49	0.7159
AT1G07200			Double Clp-N motif-containing ...		Potri.010G188200 [exp]	22.64	0.7149
AT1G34260		FAB1D	FORMS APLOID AND BINUCLEATE CE...		Potri.013G116400 [exp]	27.74	0.6924
AT1G25570			Di-glucose binding protein wit...		Potri.010G129300 [exp]	29.46	0.6457
AT2G16990			Major facilitator superfamily ...		Potri.009G138900 [exp]	33.43	0.7021

Compare expression of checked genes

Potri.005G062130 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.