Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT4G39420 3493 / 0 unknown protein
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.007G078650 [exp] 5447 / 0 AT4G39420 3458 / 0.0 unknown protein
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10005786 [exp] 3810 / 0 AT4G39420 3258 / 0.0 unknown protein Lus10006813 [exp] 1847 / 0 AT4G39420 1662 / 0.0 unknown protein Lus10006814 [exp] 588 / 0 AT4G39420 522 / 3e-163 unknown protein Lus10030711 [exp] 461 / 3e-147 AT4G39420 436 / 7e-140 unknown protein Lus10014012 [exp] 209 / 4e-61 AT4G39420 172 / 1e-49 unknown protein Lus10014011 [exp] 206 / 4e-61 AT4G39420 188 / 4e-56 unknown protein Lus10008760 [exp] 132 / 8e-35 AT4G39420 142 / 1e-39 unknown protein Lus10014010 [exp] 83 / 2e-18 AT4G39420 51 / 9e-09 unknown protein
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF14649 [poplar] [flax] Spatacsin_C Spatacsin C-terminus
Representative CDS sequence Show only first row Show all	>Potri.005G086100.3 pacid=42804286 polypeptide=Potri.005G086100.3.p locus=Potri.005G086100 ID=Potri.005G086100.3.v4.1 annot-version=v4.1 ATGGATTACTGTCTTGGCGGTGAGAGTCCGGCAATTCTGCAGCTCCACAAATGGGGCCCTTCTAAGTTCAACATCGACTTGTCGGAATTTCGCGAGGGCT TTATATCACCGACCAGGGAGCTGTTGTTGTTACTGTCTTATCAATGTGAAGCCTTGCTCCTTCCTTTAGTTGCCGCAGGGGAATCTTTCAATAATTGCGT CTCAGAACCTGTAGGTGATGAAAGGCTTCAATGTCGATCTTCGGAATTGTGTACTGAATCTAGTAGGTCAGATTTGAAGGATGATATTCCATGCTCTTCT GCATCTGTAGGGGATTTTGACAATGGTTTTTCTCTTGAAAACGGATTTTTGAGATCTAATAATTATGGTTTTGTTCATGATGTGAATTCACTTGCTTGGG GTGTATGTGGGGATACTTATAATCAGCACAAGGAGGCTTCATTTAGAGAGTTTCTATTTGTGTCCAGCAGCGATGGAGTTACAGTGCATGCTTTTCGCAA GCCTGATATTGATGGAGGAACAACTAAATCTGCACTGGAGGGTGAATTTGGGCAAGGGAGGTGGGTTGATTGGGGCCCTTCCTCTATGCCAGCTCAATTT TTGAAGGTTCAGGACTCTTCCAGCTCGTGTTCTGAAAGCACTTCTACTGTCATGGCTGATGAAAGGGCTAATGGAAATAGAGGAAGTCTGCTAGACATGG ATAAGGAAAGTGGGCCTGATGAGTTGTCGAAAGGTGTTGCTTCAAAGAGGTGGTTGCGTTCATTTTTCATCGAAGTCGAGACTATCAAATCTGAGGGTAA CATCTGGACGAGGTTTCCAGAGAAGACATCTTTTCCTTGCTCCGCAGAGGTTGTTTCCTTTAGTGTTTTTGACAGTACTTCACCACTTCTGAACCTACTT AATCAAGACTGTTCCATCGCAAATAGGGAGGAGAGCAAGTGTGAAACCATTTTCAAACCAGAGAACGAGACAGCTGCAACTGAGTCTGATGATTTGTATG ATGATTTTTGTATTGGTTCATACAAATGCTCCAAAGTTTTCTCCAGCAATTCTAATGACCTAATTGGATTTGTCTTGACACTAGTCAATTCTGCTTCTGT GAGTACTGGGAATGAAAGTGAAAGAAGCAGGAAAAAAAGTCTACTTCTTGTTGGAAAGTTAGATAGTTGGGGAATCCAATGGGTTTCCTTAGTGAAGCTT GTGCAAAGTGTACATGTAGACCATGTATCGGAGTGGGCAGACTTTTGCTTTTCTGATAGCCTTCTTGTTTGCCTAAATACTTCCGGGTTAATCTACTTTT ATGCTGCAATGTCTGGTGAATTTGTTGCATATATAGATATTTTACGAGCTTCTGGATTAAACCCTCATTCAGGCCCATGGAAGGGAGAAAAAGTGGCTAT GCCCGCTGATTTACAGATCAAACAACTTGAAGTTCAACACAATTCAACCCCCCAATGTGTTGATTTCCTTGGAAAAAGAATGTTTAGAAAGCTGCTTATT GGATCCCATACATCCTTGTTAGCTGTAGTTGATAAATACGGAGTAGTATATGTCATGTCTACTGGTAACTATTTCTCAAACAACCATGATGCTTATGATA AATTGCTTCAGCAGTTTCAACATTTATGGCCTGGGATGTTTGTTGGCTGGAAGGTTGGTGGTTCTGACATAGGGCACCAATGGGTATACTCTAATGATCC ATCCACTACGAATGAAAAATTCTCCTTTTTGGATTATGCTGGAAAAAACACGCTTGAGAAAATCCAAAACTTGAACCATCATGGGTGTGAAGACTTGTTA TTGAGTGGTTTTTCGGAGATAGCTGTTCACACGTTTCATGATCGTGAAGCAAGTTCACACCTGGTGCGGAAAGTCTTTCTTCCCACAGAGAGATTTAATG AAGACGATTACATCTGTTTTTCACCTATGGGAATCACTCGACTCATGAAGAAGCATGATGCCAAAAATCACAGAACCACTCAAGTTGTTCATTTTAATCT GCACACAAGCTCAGCAGTTCATGATGATAGATGCTTGAATAATAGGGTTAACAAGTGTTATAGCCAAGGGAAAGAAGCTCCTGTTGGAGAAGTAGTTGGT TGTAGCTTCCAGGGATTTTTTTATTTGGTGACTGAAGTTGGTCTTTCAGTTGTTCTTCCCTCTGTTTCTGCTGCATCTGATTTCCTTCCTGTTGAAACCA TTGGATATCAGCAGCGCACTATCAAAACGGACATTGGACAGCAATTAAAAAAAATGCTGGAAATAGGAGAGTCAATTGAACCCTTCTTACCTTGGAAAGT TGAAGTTTTGGATAGAGTTCTTCTCTATGAAGGCCCGGCAGAGGCAGATCAGTTATGTTTGACTAATGGGTGGGAGTTGAAAATCTCTAGGTTGCGGCGG CTACAGATGGCATTGGAATACCTGAAATATGATGAAATTGAGCAATCTCTGGAAATGCTTGTAGGCATCAACCTAGCAGAAGAAGGCATTTTGAGATTGC TTTGTGCTGCAATTTATCTGATGTCTCATAGAAATAGCAATGATAATGAGGTCTCTGCTGCATCAAGGCTCCTTGCATTAGCCAGCCACTTTACAACCAA AATGATCCGGAAATGTGGGTCGCTCCAGCATAAGAAAGATGCATACGTATTACCGGGTTTTAGGAGGACCCGTTTACTTTCTCTTCCACCAGTTCTACCA CATAAAGTACAGAACAAAATGGGGGACTCAAGAAGTCTTCATGAAATGGCTCACCTTTTAGAGATTATTCGGAATCTTCAATATCGACTGAGCTCAAAAT TCAAGAAGACTGGCCTGAGATTGATGGATGGTAGGGAGGAATTAAGCTTGGTGGAGGCAAATTTATCACAGGACGAATCTCAGCTTTCTGTTCTTTCAGC AGATGCTGCATTATCAGAGACACCAAACCAAGAAGAACTTTTGGCTTCTGTGTCTTCTGTCGGTTCTAATAATGAGAAGCTTGTTTTGATGTATCAGGAT TCCTTGGATTTCAGAACTCACTTGGATATAGAAGATTCAAATGGAGTATCTGTTCTTGTGCCACAGGGTGGTAATATGGGAAAGAAAGTTTTTCCATTTG AAAATCCTAAAGAGATGATTGCACGATGGAAATTGGATAATTTAGACCTAAATACTGTGGTTAAAGATGCACTACTATCTGGTCGTCTCCCTTTGGCAGT TCTACAATTGCATCTTCATCGTTCTAAAGATTCAGAAACCAGTAAAGAAATGCCAGATACTTTCAGTGAAGTTCGTGACATTGGAAGAGCCATTGCTTAT GACCTATTTTTAAAGGGGGAAACTGAACCTGCTGTTGCAACGTTGCAAAGGCTTGGAGAGGATGTTGCAACCTGCCTCAAGCAGCTATTTTTTGGCACGG TCAGGAGATCTCTTCGACTTCAAGTTGCAGAGGATATGAGAAGATATGGTTACCTGGGAGCATATGAACGGGAAACATTTGAGAAGATATTACTCATTGA GAGGATGTACCCTAGCAGTAGTTTCTGGAGAACTTTTGTTGGTCAGCAGGAGGCACTAAAGAAAGCTACATCAACTTTAAATTCACCAGCACAAATTAAG CTGCAGCTATTGCCATCATATACGTTTAGCAATCTTACAATTGAGTGTGGTGAAATTGATGGAGTAGTTTTAGGCTCATGGACAAGCATCAGTGGGAACT CTCCTGATCCTGTGGTTGACGAAGATACTGCTCCTGCTGGATATTGGGCTGCTGCTGCAGTGTGGTCTAGTGCCTGGGACCAGAGAACCATTGATCGTAT AGTTTTGGACCAACCTTTCATTATGGGTGTTCATGTATTGTGGGAATCTCAACTAGAGTACTATCTATGCCACAATGACTGTGAGGAAGTTTCCAAACTT TTAGACCTCATACCCACATCTGTTTTATCGGATGGAAGCCTCCAGATCACTTTGGACAACTTACAGCGTGCTCCAGAGGTTGGATCCAATTGTGAATTTC CTGAGTACAACAGTTACATATGCTCCATTGAAGAATTGGATTCTGTGTGCATTGATATTCCAGGGGTCAAGATTTTCAGGTTTCCTGCCAATGCATTTTG CTCCATGTGGTTAAGGAATTTCATGGAGCAGGAGCTTGCAAAGAAATTTATATTTTTGAATGAATACTGGGAAGGCACTGGTGAAATTGTAGCTCTGCTA GCTCGTTCAGGCCTCATAACTAGCAGGTCTGATAAAATGACAATGGAGGATTATTCTGCTGAGATTTCATCTGATCTCAATATCACAGATGATGGAAGGT TTCATGTTGTCCGCATGGAAGCTTTGCATAAATTACTCGTACATTACTGTGTGCAATATAGCTTGCCAAACCTTTTGGACCTTTACCTTGACCATCACAA ATTGGTTCTAGATAATGATTCGCTTGGTTCATTGCAAGAAGCTGCAGGTGATTGTCAATGGGCAAAATGGTTGCTTTTATGTATGATTAAGGGGCATGAA TATGATGCATCATTCTGCAATGCTCGAACAATAATGTCACCTAATTTAGTTCCTGATAGCAACCTCAATGCTCTGGAGATCGATGAAATAATTCATACTG TTGATGATATAGCGGAAGGTGGGGGTGAAATGGCAGCTTTAGCAACTCTAATGTATGCCACTGACCCAATACAAAATTGCTTGAGTAGTGGTAGTGTGAA AAGGCACGGTAGCTCCTCAGCTCAGTGCACTTTGGAAAACCTCAGGCCCACTTTGCAGCAATTTCCTACTCTGTGGCGCACTCTTGTTGCAGCAAGTTTT GGTCATGACACAACTTCTAATTTCTTGGGTCCTAAGGGAAATAAAAATGCTTTAGCAAACTATCTAAACTGGCGTGACAACATCTTCTTCTCCACTACAC GTGATACTTCACTTCTACAAATGCTGCCGTGCTGGTTTCCTAAGGCTGTGCGGAGGTTGATTCAGCTTCATATTCAGGGTCCTCTTGGTTGGCAGTCAGT GTCAGGTCTGCCTGCTGGAGAAACTTTGTTGTGCAGAGACTTTGATTTTTTCATGCATGCTGAGGAACATACAGAGATAAATGGTGTCTACTGGGAGGCA ACTATCCAAAAGCATGTTCAAGAGGAACTCTACAATTCTTCACTTGAGGAAACTAAACTTGGGCTTGAGCACCATTTACATCGTGGGCGTGCACTTGCAG CATTTAACCATATCCTCGATGTTAGAGCTCAAAAGTTGAAATTAGAAGGCCAATCTGGTGCTTCATCACATGGACAACGAAATGTTCAGTCAGATGTTCA GGCGCTTCTTGCACCTTTGACACAAAGTGAAGAGGCTGGTCTTTCATTGGTCATTCCACTTGCTATTGCTCATTTTGTGGATTCTGTGTTGGTTTCATCA TGCGCTTTTCTCCTGGAGCTTTGTGGTTTATCTGCCAGCATGCTTCATGTGGATGTTTCTGCCTTGAGGCGGATATCTTCATTTTACAAATCAAGTGAGA ACAATGAGAAATATAGCCAAATTTCACCCAAAGGTTCTGCATTTCAAGCGGTATCACATGGAGGTAATGTGGTAGAGTCTCTAGCACGATCACTTGCCGA TGAATATCTACACAAGGATCGTGTAACTAACTCTAAGTTAAAGGGGACTTCAAATTCATTCGCTGGTAAACAATCTTCAAGAGCTCTCATGCTAGTCCTG CAGCATTTGGAGAAAGCTAGTCTTCCACTAATGATGGATGGAAAGACTTGTGGATCTTGGCTACTGACTGGTATTGGCGATGGAACTGAATTAAGAGAGA AACAAAAAGTAGCAAGCCAACACTGGAATTTAGTTACACTCTTCTGTCAGATGCATCAACTTCCCTTAAGCACAAAGTATCTTACTGTTTTAGCGAGAGA CAATGATTGGGTTGGATTTCTGTCTGAAGCTCAGATTGGAGGATACCCTTTTGATTCAGTTGTCCAAGTAGCAACCAAGGAGTTCAGTGATCCACGTCTC AAAATTCATATATTAACAGTCTTAAAAGGCATGCAGTCGAGAAAGAAATCTGGTTCTCCAGCATATACATATACTGGGGAAAGTGGGAGTGAAACTCACT GTTTCCAGGAAGACATGCTTATTCCTGCTGAGCTCTTTAGAATTTTAGCAGACTGTGAGAAGCAGAAAAATCCTGGAGAGTCTCTCTTGAAGAAAGCAAA GGAGATGTCTTGGTCAATTTTGGCAATGATTGCATCGTGCTTTCCTGATGCGTCTCCCTTGTCCTGCCTAACAGTTTGGCTGGAAATCACCGCAGCAAGG GAAACTTCATCCATCAAGGTGAATGACATTGCATCCCAGATTGCGGATAATGTTGAAGCCGCTGTGGAAGCTACGAATTCCCTGCCAGCAGGTAGCAGGG TCTTAACAGTTCATTACAATCGGCAGAATGCAAAACGTAGGCGGCTTATGGAGCCAATGTATGTGGATTCATTGGTTGCCATCGATGATGTTTCAACTAC TTATGGTGGTGCAACAAGACCTGCTTCCCAAGGCGCAGTTGCTGAAGAGGAAAGAAAAGTAGATTTTGGTGAAAAAAATGTTTCAAGTGATTCTGATGAA GGACCTGTGTCTCTCTCTAAGATGGTGGCAGTGCTTTGTGAACAACAGTTGTTTCTACCTTTGCTGAGAGCTTTTGAAATGTTCCTTCCTTCATGTTCTT TTCTACCTTTCATCCGTGCACTTCAGGCATTTTCTCAAATGCGCCTGTCTGAAGCTTCAGCCCATCTAGGTTCCTTTTCTGTCAGGATAAAGGACGAACA AACCAGTATGCAGGCAAACATAGGAATTGAAGGGCGGGTCAGAACTTCATGGATAAGCTCGACTGCTGTAAAAGCTGCCAATGCCATGCTTTTAACTTGT CCATCTCCTTATGAAAAAAGATGTTTATTACAACTTCTTGCTGCTACGGACTTCGGTGATGGCGGATCTACCGCAACATACTATCGACGACTTTACTGGA AAATCAATTTAGCCGAGCCTTCACTGCGGAAGGATGATGCTCTACATCTTGGAAATCAGGCTCTAGATGATGCTTCACTTTTAGAAGCACTGGAAAAGAA TGGGCATTGGGAGCAAGCACGTAACTGGGCCAGGCAGTTGGATGCCAGTGGTGGACCTTGGAAATCTGCTGTTCACCATGTTACTGAAATTCAGGCTGAA TCCATGGTAGCTGAGTGGAAGGAGTTCCTTTGGGATGTCCCAGAAGAGAGAGTTGCTTTATGGGGCCACTGTCAGACACTGTTCATCAGATATTCCTTCC CTCCTTTACAGGCTGGGTTATTTTTCCTTAAACATGCTGAAGCTGTTGAGAAAGATCTTCCAGCGAGAGAGCTTCATGAATTGCTGCTGCTTTCTCTTCA GTGGTTAAGTGGGATGATAACTCTGTCCAATCCAGTTTATCCATTGCACCTTCTGCGAGAAATTGAGACTAGAGTATGGCTCTTGGCAGTAGAATCAGAA GCTCAGGCAAAGAGTGATAGAGACTTTACTACAACCACTTCCAGTGGTGATCCTGTTATTGGAAATGCTTCCAATATCATTGACAAGACAGCAAGTTTAA TAACAAAGATGGACAATCATATCAATACAATGAGAAGCAGAACTGTAGAAAAACAAGATGCAAGGGAAAATAACTTGGCACAGCACAAAAACCAAGTATT GGATTCCATCACACAGACAGCTGGGGGTAGTACAAAGACTAAACGGAGGGCCAAAGGCAATGTGCTATCACGACGACCATTAATGGAGCCCATAGATAAA AGTACTGAGCCTGAAGATTGTTCCACTAACTTCATTTCTAGAATTGACTTGCCATTGCTAGATGAAAACTTAAAGATAGAAATGTCTTTCTCGAAGTGGG AGGAAAGGGTTGGACCTGCAGAGCTGGAAAGAGCTGTTCTTTCTTTACTGGAGTTTGGACAAATAACAGCTTCCAAGCAACTTCAACATAAGCTGTCTCC AGCACACACTCCTCCTGAATTTAAACTTGTTGATGTTGCTCTAAAGCTTGGAGCAATAACAACCCCTGGAAGCAAAATATCCATATCAATGCTTGATGAG GAAACATGTTCTGTTGTCAAGTCATATAATATATTAACCGAGAAGCATCTGCTTGATCCACTGCAGGTCTTGGAGAGCTTAGCAACAATTTTTACTGAAG GGAGTGGACGCGGACTGTGTAAGAGAATTATAGCAGTTGTAAAAGCTGCAAATGTCTTGGGTCTTTCTTTCTTGGAGGCATTTGATAAGCAGCCAATCGA ATTGCTTCGGTTGCTTGCTCTTAAAGCACAAGAATCATTTGAAGAAGCATCTCTCATGGTGCAAACTCATTCCATGCCAGCTGCTAGTATTGCTCGAATT CTTGCAGAATCCTTTCTCAAGGGTCTACTGGCTGCGCATCGTGGGGGATATATGGATTCTCAGAAGGAGGAAGGACCTGCTCCTCTATTATGGAGATTTT CTGACTTCTTAAAGTGGGCGGAGCTTTGCCCTTCTGAACCTGAAATTGGTCATGCGTTGATGCGTTTGGTGATTACTGGACAGGAAATACCACATGCCTG TGAGGTTGAGCTTCTTATCCTGTCACACCACTTCTACAAATCATCAGCATGCCTTGATGGAGTTGATGTTCTTGTAGCCCTTGCTGCAACCAGGGTGGAA GCTTATGTGTCTGAGGGTGATTTTCCATGTTTGGCTCGCCTGATAACTGGAGTAGGAAATTTCCATGCCCTTAATTTCATTCTTGGCATTCTCATAGAAA ACGGTCAGCTGGATCTTCTTCTTCAGAAATATTCAGCTGCTGCGGAGACAAATGTGGAAACTGCTGAGGCAGTCAGAGGATTTCGAATGGCTGTTCTTAC ATCACTGAAGCATTTCAACCCTGAAGATCATGATGCGTTTGCTATGGTCTATAACCACTTTGACATGAAGCATGAAACTGCTGCTCTTTTAGAGTCACGA GCATGGCAGTCTTCTGAGCAGTGGTTTCGCCGTTATGACAAGGACCAAAATGAAGACCTCCTTGAGTCCATGCGATATTTCATTGAAGCAGCTGAAGTTC ACTCTTCCATTGATGCTGGCAATAAAACTCGCGGAGCATGTGCTCACGCATCCCTTGTTTCCCTGCAAATTCGAATGCCAGATTGCCAGTGGCTGAACTT GTCTGAAACCAATGCCAGGAGATTGTTGGTTGAGCAATCCTATTTCCAGGAGGCCTTAATTGTTGCTGAAGCTTATGGTCTTAACCAGCCAAGTGAGTGG GCACTGGTACTTTGGAATCAGATGTTAAAACCAGAACTAATTGAAGAGTTTGTTGCTGAATTTGTGGCTGTGCTTCCACTTCAGCCTTCAATGCTTGTTG AATTGGCTAGATTCTACAGAGCTGAGGTAGCAGCCAGAGGTGACCAATCCCAATTCTCAGTTTGGCTGACTGGAGGTGGCTTACCTGCAGAATGGGCTAA ATATCTGGGGAGATCGTTCAGATGCTTGTTAAAGAGGACACGGGATTTGAGGTTAAGGGTGCAGTTGGCCACCATTGCAACTGGTTTCAATGACATCATT GATACATGTATGAATGCATTGGATAAGGTTCCTGACAATGCTGCACCACTAGTCCTCAGGAAAGGGCATGGCGGTGCCTACCTCCCCTTGATGTGA
AA sequence Show only first row Show all	>Potri.005G086100.3 pacid=42804286 polypeptide=Potri.005G086100.3.p locus=Potri.005G086100 ID=Potri.005G086100.3.v4.1 annot-version=v4.1 MDYCLGGESPAILQLHKWGPSKFNIDLSEFREGFISPTRELLLLLSYQCEALLLPLVAAGESFNNCVSEPVGDERLQCRSSELCTESSRSDLKDDIPCSS ASVGDFDNGFSLENGFLRSNNYGFVHDVNSLAWGVCGDTYNQHKEASFREFLFVSSSDGVTVHAFRKPDIDGGTTKSALEGEFGQGRWVDWGPSSMPAQF LKVQDSSSSCSESTSTVMADERANGNRGSLLDMDKESGPDELSKGVASKRWLRSFFIEVETIKSEGNIWTRFPEKTSFPCSAEVVSFSVFDSTSPLLNLL NQDCSIANREESKCETIFKPENETAATESDDLYDDFCIGSYKCSKVFSSNSNDLIGFVLTLVNSASVSTGNESERSRKKSLLLVGKLDSWGIQWVSLVKL VQSVHVDHVSEWADFCFSDSLLVCLNTSGLIYFYAAMSGEFVAYIDILRASGLNPHSGPWKGEKVAMPADLQIKQLEVQHNSTPQCVDFLGKRMFRKLLI GSHTSLLAVVDKYGVVYVMSTGNYFSNNHDAYDKLLQQFQHLWPGMFVGWKVGGSDIGHQWVYSNDPSTTNEKFSFLDYAGKNTLEKIQNLNHHGCEDLL LSGFSEIAVHTFHDREASSHLVRKVFLPTERFNEDDYICFSPMGITRLMKKHDAKNHRTTQVVHFNLHTSSAVHDDRCLNNRVNKCYSQGKEAPVGEVVG CSFQGFFYLVTEVGLSVVLPSVSAASDFLPVETIGYQQRTIKTDIGQQLKKMLEIGESIEPFLPWKVEVLDRVLLYEGPAEADQLCLTNGWELKISRLRR LQMALEYLKYDEIEQSLEMLVGINLAEEGILRLLCAAIYLMSHRNSNDNEVSAASRLLALASHFTTKMIRKCGSLQHKKDAYVLPGFRRTRLLSLPPVLP HKVQNKMGDSRSLHEMAHLLEIIRNLQYRLSSKFKKTGLRLMDGREELSLVEANLSQDESQLSVLSADAALSETPNQEELLASVSSVGSNNEKLVLMYQD SLDFRTHLDIEDSNGVSVLVPQGGNMGKKVFPFENPKEMIARWKLDNLDLNTVVKDALLSGRLPLAVLQLHLHRSKDSETSKEMPDTFSEVRDIGRAIAY DLFLKGETEPAVATLQRLGEDVATCLKQLFFGTVRRSLRLQVAEDMRRYGYLGAYERETFEKILLIERMYPSSSFWRTFVGQQEALKKATSTLNSPAQIK LQLLPSYTFSNLTIECGEIDGVVLGSWTSISGNSPDPVVDEDTAPAGYWAAAAVWSSAWDQRTIDRIVLDQPFIMGVHVLWESQLEYYLCHNDCEEVSKL LDLIPTSVLSDGSLQITLDNLQRAPEVGSNCEFPEYNSYICSIEELDSVCIDIPGVKIFRFPANAFCSMWLRNFMEQELAKKFIFLNEYWEGTGEIVALL ARSGLITSRSDKMTMEDYSAEISSDLNITDDGRFHVVRMEALHKLLVHYCVQYSLPNLLDLYLDHHKLVLDNDSLGSLQEAAGDCQWAKWLLLCMIKGHE YDASFCNARTIMSPNLVPDSNLNALEIDEIIHTVDDIAEGGGEMAALATLMYATDPIQNCLSSGSVKRHGSSSAQCTLENLRPTLQQFPTLWRTLVAASF GHDTTSNFLGPKGNKNALANYLNWRDNIFFSTTRDTSLLQMLPCWFPKAVRRLIQLHIQGPLGWQSVSGLPAGETLLCRDFDFFMHAEEHTEINGVYWEA TIQKHVQEELYNSSLEETKLGLEHHLHRGRALAAFNHILDVRAQKLKLEGQSGASSHGQRNVQSDVQALLAPLTQSEEAGLSLVIPLAIAHFVDSVLVSS CAFLLELCGLSASMLHVDVSALRRISSFYKSSENNEKYSQISPKGSAFQAVSHGGNVVESLARSLADEYLHKDRVTNSKLKGTSNSFAGKQSSRALMLVL QHLEKASLPLMMDGKTCGSWLLTGIGDGTELREKQKVASQHWNLVTLFCQMHQLPLSTKYLTVLARDNDWVGFLSEAQIGGYPFDSVVQVATKEFSDPRL KIHILTVLKGMQSRKKSGSPAYTYTGESGSETHCFQEDMLIPAELFRILADCEKQKNPGESLLKKAKEMSWSILAMIASCFPDASPLSCLTVWLEITAAR ETSSIKVNDIASQIADNVEAAVEATNSLPAGSRVLTVHYNRQNAKRRRLMEPMYVDSLVAIDDVSTTYGGATRPASQGAVAEEERKVDFGEKNVSSDSDE GPVSLSKMVAVLCEQQLFLPLLRAFEMFLPSCSFLPFIRALQAFSQMRLSEASAHLGSFSVRIKDEQTSMQANIGIEGRVRTSWISSTAVKAANAMLLTC PSPYEKRCLLQLLAATDFGDGGSTATYYRRLYWKINLAEPSLRKDDALHLGNQALDDASLLEALEKNGHWEQARNWARQLDASGGPWKSAVHHVTEIQAE SMVAEWKEFLWDVPEERVALWGHCQTLFIRYSFPPLQAGLFFLKHAEAVEKDLPARELHELLLLSLQWLSGMITLSNPVYPLHLLREIETRVWLLAVESE AQAKSDRDFTTTTSSGDPVIGNASNIIDKTASLITKMDNHINTMRSRTVEKQDARENNLAQHKNQVLDSITQTAGGSTKTKRRAKGNVLSRRPLMEPIDK STEPEDCSTNFISRIDLPLLDENLKIEMSFSKWEERVGPAELERAVLSLLEFGQITASKQLQHKLSPAHTPPEFKLVDVALKLGAITTPGSKISISMLDE ETCSVVKSYNILTEKHLLDPLQVLESLATIFTEGSGRGLCKRIIAVVKAANVLGLSFLEAFDKQPIELLRLLALKAQESFEEASLMVQTHSMPAASIARI LAESFLKGLLAAHRGGYMDSQKEEGPAPLLWRFSDFLKWAELCPSEPEIGHALMRLVITGQEIPHACEVELLILSHHFYKSSACLDGVDVLVALAATRVE AYVSEGDFPCLARLITGVGNFHALNFILGILIENGQLDLLLQKYSAAAETNVETAEAVRGFRMAVLTSLKHFNPEDHDAFAMVYNHFDMKHETAALLESR AWQSSEQWFRRYDKDQNEDLLESMRYFIEAAEVHSSIDAGNKTRGACAHASLVSLQIRMPDCQWLNLSETNARRLLVEQSYFQEALIVAEAYGLNQPSEW ALVLWNQMLKPELIEEFVAEFVAVLPLQPSMLVELARFYRAEVAARGDQSQFSVWLTGGGLPAEWAKYLGRSFRCLLKRTRDLRLRVQLATIATGFNDII DTCMNALDKVPDNAAPLVLRKGHGGAYLPLM

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT4G39420			unknown protein		Potri.005G086100 [exp]	0	1
AT5G07980			dentin sialophosphoprotein-rel...		Potri.015G056400 [exp]	2.00	0.9082
AT4G00450		CCT, CRP	CRYPTIC PRECOCIOUS, CENTER CIT...		Potri.002G159900 [exp]	3.00	0.9100	Pt-CRP.3
AT5G17910			unknown protein		Potri.019G044500 [exp]	3.46	0.8862
AT1G24300			GYF domain-containing protein ...		Potri.017G069220 [exp]	7.93	0.8773
AT3G05380	MYB	ALY2, ATALY2	ARABIDOPSIS THALIANA ALWAYS EA...		Potri.005G029000 [exp]	8.66	0.8570
AT5G44800		PKR1, CHR4, MI-...	PICKLE RELATED 1, chromatin re...		Potri.001G123400 [exp]	10.24	0.8858
AT3G01460		MBD9, ATMBD9	methyl-CPG-binding domain 9 (....		Potri.017G072460 [exp]	11.22	0.8508
AT5G24350			unknown protein		Potri.012G020000 [exp]	12.24	0.8383
AT1G08060		MOM1, MOM	MORPHEUS MOLECULE 1, MORPHEUS ...		Potri.013G006000 [exp]	12.84	0.8694	MOM.2,1
AT5G09950			Tetratricopeptide repeat (TPR)...		Potri.013G129500 [exp]	13.41	0.8848

Compare expression of checked genes

Potri.005G086100 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.