Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol	CYP96G1,Pt-CYP96.2
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G47620 372 / 7e-124 CYP96A8 "cytochrome P450, family 96, subfamily A, polypeptide 8", cytochrome P450, family 96, subfamily A, polypeptide 8 (.1) AT2G23180 367 / 4e-122 CYP96A1 "cytochrome P450, family 96, subfamily A, polypeptide 1", cytochrome P450, family 96, subfamily A, polypeptide 1 (.1) AT4G39490 365 / 2e-121 CYP96A10 "cytochrome P450, family 96, subfamily A, polypeptide 10", cytochrome P450, family 96, subfamily A, polypeptide 10 (.1) AT4G39510 363 / 6e-121 CYP96A12 "cytochrome P450, family 96, subfamily A, polypeptide 12", cytochrome P450, family 96, subfamily A, polypeptide 12 (.1) AT4G39500 356 / 1e-118 CYP96A11 "cytochrome P450, family 96, subfamily A, polypeptide 11", cytochrome P450, family 96, subfamily A, polypeptide 11 (.1) AT4G32170 355 / 1e-117 CYP96A2 "cytochrome P450, family 96, subfamily A, polypeptide 2", cytochrome P450, family 96, subfamily A, polypeptide 2 (.1) AT4G39480 352 / 3e-116 CYP96A9 "cytochrome P450, family 96, subfamily A, polypeptide 9", cytochrome P450, family 96, subfamily A, polypeptide 9 (.1) AT2G21910 348 / 9e-115 CYP96A5 "cytochrome P450, family 96, subfamily A, polypeptide 5", cytochrome P450, family 96, subfamily A, polypeptide 5 (.1) AT1G57750 338 / 6e-111 MAH1, CYP96A15 MID-CHAIN ALKANE HYDROXYLASE 1, "cytochrome P450, family 96, subfamily A, polypeptide 15", cytochrome P450, family 96, subfamily A, polypeptide 15 (.1.2) AT5G52320 329 / 1e-107 CYP96A4 "cytochrome P450, family 96, subfamily A, polypeptide 4", cytochrome P450, family 96, subfamily A, polypeptide 4 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.008G125300 [exp] 434 / 1e-148 AT4G39490 410 / 4e-139 "cytochrome P450, family 96, subfamily A, polypeptide 10", cytochrome P450, family 96, subfamily A, polypeptide 10 (.1) Potri.015G132800 [exp] 417 / 1e-141 AT4G39490 589 / 0.0 "cytochrome P450, family 96, subfamily A, polypeptide 10", cytochrome P450, family 96, subfamily A, polypeptide 10 (.1) Potri.007G080300 [exp] 402 / 7e-136 AT4G39490 574 / 0.0 "cytochrome P450, family 96, subfamily A, polypeptide 10", cytochrome P450, family 96, subfamily A, polypeptide 10 (.1) Potri.005G064400 [exp] 353 / 7e-117 AT4G39490 477 / 8e-165 "cytochrome P450, family 96, subfamily A, polypeptide 10", cytochrome P450, family 96, subfamily A, polypeptide 10 (.1) Potri.001G397900 [exp] 351 / 8e-116 AT4G39490 480 / 6e-166 "cytochrome P450, family 96, subfamily A, polypeptide 10", cytochrome P450, family 96, subfamily A, polypeptide 10 (.1) Potri.015G086900 [exp] 337 / 2e-110 AT2G23180 455 / 2e-156 "cytochrome P450, family 96, subfamily A, polypeptide 1", cytochrome P450, family 96, subfamily A, polypeptide 1 (.1) Potri.015G087000 [exp] 283 / 1e-90 AT2G23180 373 / 2e-125 "cytochrome P450, family 96, subfamily A, polypeptide 1", cytochrome P450, family 96, subfamily A, polypeptide 1 (.1) Potri.007G072100 [exp] 287 / 2e-90 AT5G23190 799 / 0.0 "cytochrome P450, family 86, subfamily B, polypeptide 1", cytochrome P450, family 86, subfamily B, polypeptide 1 (.1) Potri.005G092200 [exp] 286 / 7e-90 AT5G23190 788 / 0.0 "cytochrome P450, family 86, subfamily B, polypeptide 1", cytochrome P450, family 86, subfamily B, polypeptide 1 (.1)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10002527 [exp] 322 / 1e-104 AT2G23180 454 / 7e-156 "cytochrome P450, family 96, subfamily A, polypeptide 1", cytochrome P450, family 96, subfamily A, polypeptide 1 (.1) Lus10003669 [exp] 322 / 3e-104 AT2G23180 440 / 4e-150 "cytochrome P450, family 96, subfamily A, polypeptide 1", cytochrome P450, family 96, subfamily A, polypeptide 1 (.1) Lus10022279 [exp] 308 / 4e-99 AT2G23180 449 / 4e-154 "cytochrome P450, family 96, subfamily A, polypeptide 1", cytochrome P450, family 96, subfamily A, polypeptide 1 (.1) Lus10028047 [exp] 299 / 6e-96 AT2G21910 375 / 1e-125 "cytochrome P450, family 96, subfamily A, polypeptide 5", cytochrome P450, family 96, subfamily A, polypeptide 5 (.1) Lus10022277 [exp] 290 / 4e-92 AT4G39490 395 / 1e-132 "cytochrome P450, family 96, subfamily A, polypeptide 10", cytochrome P450, family 96, subfamily A, polypeptide 10 (.1) Lus10025678 [exp] 280 / 2e-88 AT4G39490 363 / 9e-121 "cytochrome P450, family 96, subfamily A, polypeptide 10", cytochrome P450, family 96, subfamily A, polypeptide 10 (.1) Lus10035234 [exp] 278 / 3e-87 AT4G39490 382 / 1e-127 "cytochrome P450, family 96, subfamily A, polypeptide 10", cytochrome P450, family 96, subfamily A, polypeptide 10 (.1) Lus10015306 [exp] 276 / 2e-83 AT4G39490 342 / 3e-108 "cytochrome P450, family 96, subfamily A, polypeptide 10", cytochrome P450, family 96, subfamily A, polypeptide 10 (.1) Lus10035235 [exp] 268 / 2e-83 AT4G39490 359 / 2e-118 "cytochrome P450, family 96, subfamily A, polypeptide 10", cytochrome P450, family 96, subfamily A, polypeptide 10 (.1) Lus10002525 [exp] 267 / 3e-83 AT4G39490 410 / 2e-138 "cytochrome P450, family 96, subfamily A, polypeptide 10", cytochrome P450, family 96, subfamily A, polypeptide 10 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF00067 [poplar] [flax] p450 Cytochrome P450
Representative CDS sequence Show only first row Show all	>Potri.005G094500.1 pacid=42802885 polypeptide=Potri.005G094500.1.p locus=Potri.005G094500 ID=Potri.005G094500.1.v4.1 annot-version=v4.1 ATGGCCATTCTTACCCTTATCATACTGTTCGTAGCAACTATTTTCTCCATTTTTTTCTTGCCTTTTATCAAGAAGAATAGCAGCCCGTGGATTCTCGTAC GTTCTCTTGTCAACTTCTATCGCATGCATGATAACCAAGCCGAAATGCTTGAACAAAATAATGGCACGATTTTAGTGAAACGTTCCTGGTTCGGAGGCAA AGATATATTACTCACGAGTGATCCTGCAAATGTTCGCCACATAATGAGCACAAACTTTTCAAATTATCCAAAAGGGCCTGAATGGAAGAAACAATTTGAA TTTTTTGGTGATTCAGTCTTCACTTTGGACTTTGAGGAATGGAAGCACCACAGGAAGGTAATCCGCTCATATATCAGTCACCGATCGTTCCAGCAATTCG CTGGGAAGATTGTTCGAGATTGTATAGAGATAGAGCTAAGCTCGGTTCTTGATCGCGTATCTAATCAACAAATAGTTGTGGACTTTGAAGGTTTACTTAG GAGGTATATATATTATTTTGCTTGCTGCATTTCTACAGGCTACAAACCCAAGTTCATTGACCTGGCATTCTCAGAAGATAAATTTTTGAAGGCCACAGAT GACGCTTGTGATGCAATCACCGTCCGATATCTGGTGCCAGAAAGCATTTGGAAGCTGCAAAGGTGGTTCGGACTGGGGAAGGAGAAGAGGCTAAGCGAAG CTAGGAAAACCATTGATAAGATTATCGACGATTACATATCAATGAAGCAAGAAGAAATGAGCAAAGGAGAAATCAGGAATGATGAGGAAGATTTTAGTGC ACTGAAAAGCTATACAACTGGAAATGAGATATTTGAACAAGCCGATCATAAAGTTATCAAGGATGGCACTATGAGTTTAATATTTGCAATTGAAGACACT ACAAGTTCATCTCTCTCCCGGTTCTTTTGGATTTTTACGAAGAATCCGAAGGTTGAAACCAAAATTCGACAAGAGTTGGAGAAAATCAGGCCAGTGACAG AAGCGCGGAAAAGCTCCTCATTTTTCAGCGAAGAAGAGGTGAGTAAAATGGTCTACCTACAAGCAGCTTTGTTGGAGACATTGAGGTTGTTCCCACCAGC TTCCATGGTGTCCAAAACTGCCGTTGAAGCAGACACTCTTCCAAGCGGACATCATATCAGTCAGAATACGATGGTCGTTATCTCTGCGTATGCAATGGGA AGGATGCGCACGATTTGGGGACAGGATTGCCTTGAATTCAAACCAGAGAGATGGATCATGGAGGACGGAAGAATTAGACATGAGCCGCCACATAAATTCT CGGCATTCGGTTCAGGGCCTCGGATTTGTCCTGGGAAGGACTTAGGCCTCACGTTGTTGAAGACTTTCGCAGCGACAATCATTTACAATTACCATATTCA GGTTGTAGAGGACCGCGTTGGAGCACCCAAGAATAATTTCATGCTTCACTTGGATCATGGCTTGATGGTCAGGCTTAACAAGAGATGGACTTAG
AA sequence Show only first row Show all	>Potri.005G094500.1 pacid=42802885 polypeptide=Potri.005G094500.1.p locus=Potri.005G094500 ID=Potri.005G094500.1.v4.1 annot-version=v4.1 MAILTLIILFVATIFSIFFLPFIKKNSSPWILVRSLVNFYRMHDNQAEMLEQNNGTILVKRSWFGGKDILLTSDPANVRHIMSTNFSNYPKGPEWKKQFE FFGDSVFTLDFEEWKHHRKVIRSYISHRSFQQFAGKIVRDCIEIELSSVLDRVSNQQIVVDFEGLLRRYIYYFACCISTGYKPKFIDLAFSEDKFLKATD DACDAITVRYLVPESIWKLQRWFGLGKEKRLSEARKTIDKIIDDYISMKQEEMSKGEIRNDEEDFSALKSYTTGNEIFEQADHKVIKDGTMSLIFAIEDT TSSSLSRFFWIFTKNPKVETKIRQELEKIRPVTEARKSSSFFSEEEVSKMVYLQAALLETLRLFPPASMVSKTAVEADTLPSGHHISQNTMVVISAYAMG RMRTIWGQDCLEFKPERWIMEDGRIRHEPPHKFSAFGSGPRICPGKDLGLTLLKTFAATIIYNYHIQVVEDRVGAPKNNFMLHLDHGLMVRLNKRWT

---

DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

---

Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT1G47620		CYP96A8	"cytochrome P450, family 96, s...		Potri.005G094500 [exp]	0	1	CYP96G1,Pt-CYP96.2
AT4G35160			O-methyltransferase family pro...		Potri.013G141301 [exp]	3.46	0.9999
AT4G35160			O-methyltransferase family pro...		Potri.013G136300 [exp]	4.24	0.9999
AT4G35160			O-methyltransferase family pro...		Potri.013G143800 [exp]	5.47	0.9999
AT5G50690		ATHSD7	hydroxysteroid dehydrogenase 7...		Potri.012G101900 [exp]	6.00	0.9999
AT2G38540		ATLTP1, LP1	ARABIDOPSIS THALIANA LIPID TRA...		Potri.006G108100 [exp]	8.36	0.9999	Pt-LTP1.1
AT1G24020		MLP423	MLP-like protein 423 (.1.2)		Potri.008G212300 [exp]	9.38	0.9998
AT5G48930		HCT	hydroxycinnamoyl-CoA shikimate...		Potri.005G028000 [exp]	9.38	0.9997
AT5G50700		HSD1	hydroxysteroid dehydrogenase 1...		Potri.012G102000 [exp]	9.48	0.9998
AT3G57650		LPAT2	lysophosphatidyl acyltransfera...		Potri.009G054500 [exp]	10.09	0.9997
AT5G13930		ATCHS, TT4, CHS	TRANSPARENT TESTA 4, CHALCONE ...		Potri.003G176700 [exp]	10.81	0.9998	CHS.3

Compare expression of checked genes

Potri.005G094500 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.