Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol	SAT.4
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT4G35640 280 / 3e-94 ATSERAT3;2 serine acetyltransferase 3;2 (.1) AT2G17640 267 / 9e-90 SAT-106, AtSerat3;1 SERINE ACETYLTRANSFERASE 106, Trimeric LpxA-like enzymes superfamily protein (.1) AT5G56760 145 / 5e-42 SAT-52, AtSerat1;1, SAT5 SERINE ACETYLTRANSFERASE 52, serine acetyltransferase 1;1 (.1) AT3G13110 137 / 1e-38 SAT-M, SAT-A, SAT3, SAT-1, AtSerat2;2 SERINE ACETYLTRANSFERASE 3, SERINE ACETYLTRANSFERASE-MITOCHONDRIAL, SERINE ACETYLTRANSFERASE A, SERINE ACETYLTRANSFERASE-1, serine acetyltransferase 2;2 (.1) AT1G55920 134 / 6e-38 SAT5, SAT1, AtSerat2;1 SERINE ACETYLTRANSFERASE 5, SERINE ACETYLTRANSFERASE 1, serine acetyltransferase 2;1 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.013G109500 [exp] 149 / 9e-44 AT5G56760 419 / 1e-148 SERINE ACETYLTRANSFERASE 52, serine acetyltransferase 1;1 (.1) Potri.001G365500 [exp] 144 / 2e-41 AT3G13110 402 / 3e-140 SERINE ACETYLTRANSFERASE 3, SERINE ACETYLTRANSFERASE-MITOCHONDRIAL, SERINE ACETYLTRANSFERASE A, SERINE ACETYLTRANSFERASE-1, serine acetyltransferase 2;2 (.1) Potri.015G147000 [exp] 135 / 1e-38 AT5G56760 420 / 5e-149 SERINE ACETYLTRANSFERASE 52, serine acetyltransferase 1;1 (.1) Potri.011G068001 [exp] 120 / 3e-34 AT2G17640 134 / 6e-39 SERINE ACETYLTRANSFERASE 106, Trimeric LpxA-like enzymes superfamily protein (.1)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10010679 [exp] 281 / 8e-95 AT4G35640 448 / 6e-159 serine acetyltransferase 3;2 (.1) Lus10032686 [exp] 146 / 9e-43 AT5G56760 481 / 2e-173 SERINE ACETYLTRANSFERASE 52, serine acetyltransferase 1;1 (.1) Lus10008567 [exp] 145 / 4e-42 AT5G56760 482 / 2e-173 SERINE ACETYLTRANSFERASE 52, serine acetyltransferase 1;1 (.1) Lus10016603 [exp] 142 / 1e-40 AT3G13110 430 / 2e-151 SERINE ACETYLTRANSFERASE 3, SERINE ACETYLTRANSFERASE-MITOCHONDRIAL, SERINE ACETYLTRANSFERASE A, SERINE ACETYLTRANSFERASE-1, serine acetyltransferase 2;2 (.1) Lus10040503 [exp] 139 / 8e-40 AT3G13110 434 / 4e-153 SERINE ACETYLTRANSFERASE 3, SERINE ACETYLTRANSFERASE-MITOCHONDRIAL, SERINE ACETYLTRANSFERASE A, SERINE ACETYLTRANSFERASE-1, serine acetyltransferase 2;2 (.1) Lus10007424 [exp] 119 / 1e-31 AT4G35640 294 / 4e-98 serine acetyltransferase 3;2 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF06426 [poplar] [flax] SATase_N Serine acetyltransferase, N-terminal
Representative CDS sequence Show only first row Show all	>Potri.005G099700.7 pacid=42804710 polypeptide=Potri.005G099700.7.p locus=Potri.005G099700 ID=Potri.005G099700.7.v4.1 annot-version=v4.1 ATGGCTTGTCTAAGCGACGAGACTTGGGTTTCATCAATGCTATCTAAACGATTATCTATCCAAGAAGGAAAAGAAGATGGAGTGAAGGAAGAGGAAACCA CAAATTCTTTTGCTTCAGACTCTACAAATTTTCCCTTCGAGAAGGTTTTTCCTGTTTATGCGATGGGGTTTTTGAAGCCTGAATCAGACCCTGTTTTATT GCCGGCTGATTCCAGAGACCCCATCTGGGATGCTGTTAGAGAAGAGGCTAAGATAGAGGCGGAAAAAGAACCGATTTTGAGTAGCTTTTTGTATGCTAGT ATTTTGTCGCATGATTGCCTAGAGCAAGCATTGGCATTTGTTCTCGCAAATCGGCTGCAAAATCCTACTCTATTGGCAACCCAATTATTGGATACAATTT CTAATGTAATAATGAAGGATAGAGGTATTCAGCATTCTATTCGCCTAGATATGCAGGCATTTAAAGACCGAGATCCTGCCTGTTTGTCATATTGTTCTGC TCTATTGTATCTCAAGGGATACCATTCCCTGCAATCCTATAGAGTAGCACATGTTTTGTGGAACCAAGGACGGACAGTACTGGCCTTGGCATTGCAAAGC CGAATCAGCGAGGTTTTTGGCATTGACATACATCCAGCTTCCAGAATTGGAGAGGGCATATTATTGGATCATGGGACAGGGTGTGGTTGTCGGTGA
AA sequence Show only first row Show all	>Potri.005G099700.7 pacid=42804710 polypeptide=Potri.005G099700.7.p locus=Potri.005G099700 ID=Potri.005G099700.7.v4.1 annot-version=v4.1 MACLSDETWVSSMLSKRLSIQEGKEDGVKEEETTNSFASDSTNFPFEKVFPVYAMGFLKPESDPVLLPADSRDPIWDAVREEAKIEAEKEPILSSFLYAS ILSHDCLEQALAFVLANRLQNPTLLATQLLDTISNVIMKDRGIQHSIRLDMQAFKDRDPACLSYCSALLYLKGYHSLQSYRVAHVLWNQGRTVLALALQS RISEVFGIDIHPASRIGEGILLDHGTGCGCR

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT4G35640		ATSERAT3;2	serine acetyltransferase 3;2 (...		Potri.005G099700 [exp]	0	1	SAT.4
AT1G79810		PEX2, TED3, ATP...	ARABIDOPSIS PEROXIN 2, Pex2/Pe...		Potri.003G051500 [exp]	2.44	0.8888	TED3.1
AT2G17640		SAT-106, AtSera...	SERINE ACETYLTRANSFERASE 106, ...		Potri.011G068001 [exp]	5.00	0.8699
AT3G25070		RIN4	RPM1 interacting protein 4 (.1...		Potri.002G245400 [exp]	13.56	0.8723	RIN4.1
AT5G63050		EMB2759	embryo defective 2759 (.1.2)		Potri.012G088600 [exp]	18.54	0.8619
AT5G09830			BolA-like family protein (.1)		Potri.001G309200 [exp]	21.95	0.8805
AT2G05620		PGR5	proton gradient regulation 5 (...		Potri.008G171000 [exp]	23.30	0.8736	PGR5.2
AT4G03410			Peroxisomal membrane 22 kDa (M...		Potri.019G103200 [exp]	30.78	0.8697
AT3G12800		SDRB, DECR	short-chain dehydrogenase-redu...		Potri.012G125900 [exp]	38.10	0.8415
AT3G51030		ATTRX1, ATTRXH1	ARABIDOPSIS THALIANA THIOREDOX...		Potri.005G232700 [exp]	41.58	0.8104
AT5G01410		PDX1, ATPDX1.3,...	REDUCED SUGAR RESPONSE 4, ARAB...		Potri.006G100500 [exp]	49.47	0.8579	Pt-PDX1.1

Compare expression of checked genes

Potri.005G099700 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.