Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G11000 434 / 8e-147 ATMLO4, MLO4 MILDEW RESISTANCE LOCUS O 4, Seven transmembrane MLO family protein (.1) AT1G26700 377 / 5e-125 ATMLO14, MLO14 MILDEW RESISTANCE LOCUS O 14, Seven transmembrane MLO family protein (.1) AT5G53760 377 / 2e-124 ATMLO11, MLO11 MILDEW RESISTANCE LOCUS O 11, Seven transmembrane MLO family protein (.1.2) AT1G11310 274 / 7e-85 PMR2, ATMLO2, MLO2 POWDERY MILDEW RESISTANT 2, MILDEW RESISTANCE LOCUS O 2, Seven transmembrane MLO family protein (.1.2) AT2G39200 273 / 2e-84 ATMLO12, MLO12 MILDEW RESISTANCE LOCUS O 12, Seven transmembrane MLO family protein (.1) AT1G61560 271 / 9e-84 ATMLO6, MLO6 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) AT4G02600 263 / 6e-81 MLO1, ATMLO1 MILDEW RESISTANCE LOCUS O 1, Seven transmembrane MLO family protein (.1.2) AT2G44110 253 / 1e-77 ATMLO15, MLO15 MILDEW RESISTANCE LOCUS O 15, Seven transmembrane MLO family protein (.1.2) AT2G33670 252 / 2e-77 ATMLO5, MLO5 MILDEW RESISTANCE LOCUS O 5, Seven transmembrane MLO family protein (.1) AT1G42560 247 / 7e-76 MLO9, ATMLO9 ARABIDOPSIS THALIANA MILDEW RESISTANCE LOCUS O 9, Seven transmembrane MLO family protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.004G218500 [exp] 448 / 2e-152 AT1G11000 735 / 0.0 MILDEW RESISTANCE LOCUS O 4, Seven transmembrane MLO family protein (.1) Potri.001G402400 [exp] 368 / 3e-121 AT5G53760 828 / 0.0 MILDEW RESISTANCE LOCUS O 11, Seven transmembrane MLO family protein (.1.2) Potri.011G121600 [exp] 331 / 1e-106 AT5G53760 723 / 0.0 MILDEW RESISTANCE LOCUS O 11, Seven transmembrane MLO family protein (.1.2) Potri.009G011900 [exp] 292 / 3e-91 AT1G61560 603 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Potri.007G064200 [exp] 283 / 2e-88 AT2G39200 502 / 4e-173 MILDEW RESISTANCE LOCUS O 12, Seven transmembrane MLO family protein (.1) Potri.008G041400 [exp] 280 / 3e-87 AT1G61560 768 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Potri.005G099200 [exp] 268 / 1e-82 AT2G17480 624 / 0.0 MILDEW RESISTANCE LOCUS O 8, Seven transmembrane MLO family protein (.1) Potri.007G064300 [exp] 263 / 1e-80 AT2G17480 669 / 0.0 MILDEW RESISTANCE LOCUS O 8, Seven transmembrane MLO family protein (.1) Potri.004G050000 [exp] 257 / 1e-79 AT2G39200 490 / 4e-170 MILDEW RESISTANCE LOCUS O 12, Seven transmembrane MLO family protein (.1)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10028440 [exp] 535 / 0 AT1G11000 366 / 9e-120 MILDEW RESISTANCE LOCUS O 4, Seven transmembrane MLO family protein (.1) Lus10041893 [exp] 526 / 0 AT1G11000 353 / 1e-114 MILDEW RESISTANCE LOCUS O 4, Seven transmembrane MLO family protein (.1) Lus10032669 [exp] 340 / 2e-110 AT5G53760 777 / 0.0 MILDEW RESISTANCE LOCUS O 11, Seven transmembrane MLO family protein (.1.2) Lus10043085 [exp] 331 / 1e-106 AT5G53760 776 / 0.0 MILDEW RESISTANCE LOCUS O 11, Seven transmembrane MLO family protein (.1.2) Lus10040388 [exp] 279 / 3e-86 AT2G39200 735 / 0.0 MILDEW RESISTANCE LOCUS O 12, Seven transmembrane MLO family protein (.1) Lus10023506 [exp] 270 / 1e-82 AT2G39200 731 / 0.0 MILDEW RESISTANCE LOCUS O 12, Seven transmembrane MLO family protein (.1) Lus10036519 [exp] 269 / 2e-82 AT1G61560 763 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Lus10041410 [exp] 267 / 8e-82 AT1G61560 769 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Lus10001370 [exp] 263 / 3e-81 AT1G11000 406 / 1e-136 MILDEW RESISTANCE LOCUS O 4, Seven transmembrane MLO family protein (.1) Lus10019630 [exp] 259 / 1e-78 AT2G17480 711 / 0.0 MILDEW RESISTANCE LOCUS O 8, Seven transmembrane MLO family protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF03094 [poplar] [flax] Mlo Mlo family
Representative CDS sequence Show only first row Show all	>Potri.005G111400.1 pacid=42805362 polypeptide=Potri.005G111400.1.p locus=Potri.005G111400 ID=Potri.005G111400.1.v4.1 annot-version=v4.1 ATGGATAAAGAGTTATCTTTGGAGTTGACCCCTACATGGGCTGTGGTCACTGTGGTGGTGGTTATGGTTTCTCTTGGTTTCTTCTTTCAAGGCTCCTTGA AACAGCTTGCAAAGTGGCTGGATAGGACCAAGAGAAAAGCACTACTTTCAGCACTAGACAAGATCAAAGAAGAGCTAATGGTTTTTGGGCTTCTATCGTT GTTGATGGGTCATTGGATTGTTTTTGTGGCCAAGATTTGTGTTAAATCATCAACTTTGAACAGCACATTTTATCCATGCGTGGTGAAGAAGAATAATTTA ACACCAGGACAGCATGTTCTTTCAAGAGTAAAGTACCCAAACGATTCATTTGTTAAAGAGCTGGTGCACAAACAAAAGAATGAATATTGTCCCGAGGGTC ATGAATCCTTCGTTTCACATGAAAGTCTCGAACAGCTTCATCGTTTGATGTTTGTCCTGGGAGTTACCCATGTTTCTTACAGCTTTATTGCCATAGCCTT GGCCATGATCAAGATTTATAGCTGGAGAACATGGGAAAACCAGGCTAAGACTATGGCTCTTCAAAGTGTACTAGGATCACCTGAAGCTGCATTTGACGAA ACAAGGCAACTATCTACCTTCATTTGTCACCACACATCCCATCCATGGAGCCAGCACCGAGTTCTTGTTTGGCTGCTTTGTTTCAGCCGCCAGTTCTGGA GTTCCATAAACCAAGCTGACTATATGGCTTTGCGCTTGGGTTTCATCAGCAAACATCAACTTCCTCTGACATATGATTTCCATAATTATATGCTTCGAAG CATGGAGGAGGAATTCCGTGATATTGTTGGCATCAGTGTGCCTCTGTGGATTTATGGCATATGTTGCATTTTCCTCGAGTTTCACGGAACTGATCTTTAC TTTTGGCTTTCCTTTCTTCCAGCCATTTTAATCCTGCTAATTGGTACAAAACTGCACCGGGTGGTGGTGAAATTGGCTGTTGAAATTATGAATTTATTTC CATGGCTGGGAAATCGTCAGTTCAACCTGAGGGATGAGCTCTTCTGGTTTGGAAAGCCTAGACTTCTTCTGTGGTTGATACAATTCATATCATTTCAGAA CGCTTTTGAGATGTCAACATTCCTATGGTCCCTGTGGGAAATCAAAGAGTCTTCTTGTTTTATGGACAATGAGACGTACATTGCTATCCGCTTGGCTTGC GGGGTGGTCACACAATTCTGGTTTAGCTTTATCACGTTCCCACTCTATGTAATCATCACACAGATGGGCGCAAAGTTCAAGAAAACGGTAGTATCCGAAA ATGTGAGGAAATCACTGCATGGGTGGCAAAGGAGAGTGAAGGCCAAGCAAAGTTCATCTACTCCAAACCTTCTGGCTCTTCCATCAACTACATCTTTGGG GTTTTCGATGACAGATAGCAAACTCAATACCAACTTTAGCAGCATAGGCAGGAGCTCCTCGAGAGTCGTGGATAAATCAGCAACCTTGCAACATCAAGAG GCCTCTACTTCACAAGCAGTTACTTATGGAATATCAGAAGATAATGAAACGCTTGAGGTTTCACTTGGTTCTGGTACTCCTTGCTATGACACTTCTAGTG ATGAAGACGATGCTGGTGTTCATGATCTTGGTCATTAA
AA sequence Show only first row Show all	>Potri.005G111400.1 pacid=42805362 polypeptide=Potri.005G111400.1.p locus=Potri.005G111400 ID=Potri.005G111400.1.v4.1 annot-version=v4.1 MDKELSLELTPTWAVVTVVVVMVSLGFFFQGSLKQLAKWLDRTKRKALLSALDKIKEELMVFGLLSLLMGHWIVFVAKICVKSSTLNSTFYPCVVKKNNL TPGQHVLSRVKYPNDSFVKELVHKQKNEYCPEGHESFVSHESLEQLHRLMFVLGVTHVSYSFIAIALAMIKIYSWRTWENQAKTMALQSVLGSPEAAFDE TRQLSTFICHHTSHPWSQHRVLVWLLCFSRQFWSSINQADYMALRLGFISKHQLPLTYDFHNYMLRSMEEEFRDIVGISVPLWIYGICCIFLEFHGTDLY FWLSFLPAILILLIGTKLHRVVVKLAVEIMNLFPWLGNRQFNLRDELFWFGKPRLLLWLIQFISFQNAFEMSTFLWSLWEIKESSCFMDNETYIAIRLAC GVVTQFWFSFITFPLYVIITQMGAKFKKTVVSENVRKSLHGWQRRVKAKQSSSTPNLLALPSTTSLGFSMTDSKLNTNFSSIGRSSSRVVDKSATLQHQE ASTSQAVTYGISEDNETLEVSLGSGTPCYDTSSDEDDAGVHDLGH

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT1G11000		ATMLO4, MLO4	MILDEW RESISTANCE LOCUS O 4, S...		Potri.005G111400 [exp]	0	1
AT1G65590		HEXO3, ATHEX1	beta-hexosaminidase 3 (.1)		Potri.008G079400 [exp]	2.00	0.8972
AT5G04820	OFP	ATOFP13, OFP13	ARABIDOPSIS THALIANA OVATE FAM...		Potri.010G241500 [exp]	5.47	0.8868
AT1G12600			UDP-N-acetylglucosamine (UAA) ...		Potri.014G077500 [exp]	17.20	0.8825
AT2G15580			RING/U-box superfamily protein...		Potri.006G190300 [exp]	20.97	0.8875
AT1G29730			Leucine-rich repeat transmembr...		Potri.016G012300 [exp]	21.33	0.8874
AT5G04820	OFP	ATOFP13, OFP13	ARABIDOPSIS THALIANA OVATE FAM...		Potri.016G072900 [exp]	24.73	0.8778
AT1G60420			DC1 domain-containing protein ...		Potri.008G175600 [exp]	29.18	0.8071
AT3G59420		ACR4	crinkly4 (.1)		Potri.017G029900 [exp]	29.46	0.8749	Pt-ACR4.2
AT5G18080		SAUR24	small auxin up RNA 24, SAUR-li...		Potri.004G165400 [exp]	34.39	0.8855
AT2G25737			Sulfite exporter TauE/SafE fam...		Potri.003G053000 [exp]	35.49	0.8683

Compare expression of checked genes

Potri.005G111400 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.