Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G17930 6266 / 0 Phosphatidylinositol 3- and 4-kinase family protein with FAT domain (.1) AT4G36080 6080 / 0 phosphotransferases, alcohol group as acceptor;binding;inositol or phosphatidylinositol kinases (.1.2.3) AT1G50030 75 / 1e-12 TOR target of rapamycin (.1.2) AT5G40820 70 / 5e-11 ATATR, ATRAD3, ATR ARABIDOPSIS THALIANA ATAXIA TELANGIECTASIA-MUTATED AND RAD3-RELATED, Ataxia telangiectasia-mutated and RAD3-related (.1) AT3G48190 52 / 2e-05 PIG1, ATATM, ATM pcd in male gametogenesis 1, ARABIDOPSIS THALIANA ATAXIA-TELANGIECTASIA MUTATED, ataxia-telangiectasia mutated (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.007G057900 [exp] 5878 / 0 AT2G17930 5098 / 0.0 Phosphatidylinositol 3- and 4-kinase family protein with FAT domain (.1) Potri.007G057850 [exp] 1281 / 0 AT2G17930 1074 / 0.0 Phosphatidylinositol 3- and 4-kinase family protein with FAT domain (.1) Potri.004G179000 [exp] 89 / 6e-17 AT5G40820 3459 / 0.0 ARABIDOPSIS THALIANA ATAXIA TELANGIECTASIA-MUTATED AND RAD3-RELATED, Ataxia telangiectasia-mutated and RAD3-related (.1) Potri.001G289200 [exp] 83 / 4e-15 AT1G50030 4080 / 0.0 target of rapamycin (.1.2) Potri.009G084500 [exp] 82 / 1e-14 AT1G50030 4038 / 0.0 target of rapamycin (.1.2) Potri.015G076650 [exp] 70 / 5e-11 AT3G48190 3584 / 0.0 pcd in male gametogenesis 1, ARABIDOPSIS THALIANA ATAXIA-TELANGIECTASIA MUTATED, ataxia-telangiectasia mutated (.1) Potri.004G147800 [exp] 56 / 1e-06 AT1G50030 252 / 2e-66 target of rapamycin (.1.2)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10028458 [exp] 6582 / 0 AT2G17930 6325 / 0.0 Phosphatidylinositol 3- and 4-kinase family protein with FAT domain (.1) Lus10041910 [exp] 5353 / 0 AT2G17930 5862 / 0.0 Phosphatidylinositol 3- and 4-kinase family protein with FAT domain (.1) Lus10041911 [exp] 1040 / 0 AT2G17930 989 / 0.0 Phosphatidylinositol 3- and 4-kinase family protein with FAT domain (.1) Lus10023991 [exp] 95 / 1e-18 AT5G40820 3276 / 0.0 ARABIDOPSIS THALIANA ATAXIA TELANGIECTASIA-MUTATED AND RAD3-RELATED, Ataxia telangiectasia-mutated and RAD3-related (.1) Lus10025091 [exp] 94 / 3e-18 AT5G40820 3033 / 0.0 ARABIDOPSIS THALIANA ATAXIA TELANGIECTASIA-MUTATED AND RAD3-RELATED, Ataxia telangiectasia-mutated and RAD3-related (.1) Lus10037246 [exp] 76 / 6e-13 AT1G50030 4101 / 0.0 target of rapamycin (.1.2) Lus10035661 [exp] 71 / 2e-11 AT1G50030 2590 / 0.0 target of rapamycin (.1.2) Lus10019489 [exp] 61 / 2e-08 AT3G48190 3373 / 0.0 pcd in male gametogenesis 1, ARABIDOPSIS THALIANA ATAXIA-TELANGIECTASIA MUTATED, ataxia-telangiectasia mutated (.1) Lus10023840 [exp] 55 / 3e-06 AT1G50030 239 / 2e-62 target of rapamycin (.1.2)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0016 [poplar] [flax] PKinase PF00454 [poplar] [flax] PI3_PI4_kinase Phosphatidylinositol 3- and 4-kinase CL0020 [poplar] [flax] TPR PF02259 [poplar] [flax] FAT FAT domain CL0020 [poplar] [flax] PF02260 [poplar] [flax] FATC FATC domain
Representative CDS sequence Show only first row Show all	>Potri.005G114300.1 pacid=42804186 polypeptide=Potri.005G114300.1.p locus=Potri.005G114300 ID=Potri.005G114300.1.v4.1 annot-version=v4.1 ATGAGTCCAATTCAGAATTTCGAGCAGCATTCTCGCCATCTCGTGGAGCCTGACCTCCCGATTCAAACGAGGCTACAGATGGCTATGGAGGTGCGGGATA GTCTTGAGATTGCGCACACGGCGGAGTATTTGAATTTTCTTAAATGTTACTTCCCGGCATCTTCTATTATTCTGTTACAAATTACAAAACCGCAATTTGT AGATAATTCTGAGCATAAGTTACGAAATATTGTGGTGGAGATTCTGAATCGCTTACCGCATAGTGAGGTTCTTCGGCCCTTTGTTCAGGATCTTTTAAAA GTTGCAATGCAAGTGCTTACTACCGATAATGAAGAAAATGGGTTGATATGCATTCGTATTATTTTTGATCTTTTGAGGAATTTTAGGCCAACATTAGAAA ATGAGGTTCAGCCATTTTTAGACTTTGTATGTAAGATTTATCAGAATTTTAGATTGACTGTTAGCCATTTCTTTGATAACGCAAGTGCGGCTGTTGAGGA TGTTAAACCAATGGAAATTTCTACTTCTTCAGATCAAGGGCTTTTGAGTACTGGACACATTGGGAATGGCCAGCTTAATCCTAGTACTCGTTCATTTAAG ATAGTTACTGAGAGTCCACTTGTGGTTATGTTTCTGTTCCAATTGTATAGCCGTCTTGTACAAACTAATATTCCTCACTTATTGCCATTGATGGTTGCTG CAATATCTGTCCCGGGCCCTGACAAGGTTCCTCCCCATCTGAAAACTAACTTCATTGAACTGAAGGGTGCACAGGTTAAGACAGTTTCTTTCTTAACCTA CCTGTTGAAGAGTTTTGCTGACTATATTAGGCCACATGAAGAAAGTATATGTAAAAGCATTGTGAATTTGCTTGTTACATGCTCAGACTCTGTGGCCATT AGAAAGGAACTGCTAGTTGCCTTAAAACATGTTCTAGGGACAGATTTCAAGAGGGGTTTATTTCCTTTAATTGACACACTTTTAGAAGAGCGAGTTCTAG TTGGAACTGGTCGGGCATGCTATGAAACTCTGAGGCCATTGGCTTATAGCCTACTTGCAGAGATTGTTCATCATGTTCGGAGTGACCTTTCCTTATCACA GCTGTCACGGATTATTTACCTGTTCTCAAGTAACATGCATGATGCTTCATTATCTCTCAGCATCCACACCACCTGTGCCCGGTTAATGTTAAATCTGGTA GAGCCAATTTTTGAGAAAGGTGTGGACCATTCAACCATGGATGAAGCTCGGATTTTACTGGGGCGTATTTTGGATGCTTTTGTTGGCAAATTCAGCACTT TTAAGCGCACCATTCCGCAGCTGTTGGAGGAAGGGGAGGATGGAAAGGAGCGTGCTACTTTGAGGTCAAAGCTTGAACTCCCTGTGCAGGCAGTTTTGAA TTTGCAAGTTCCGGTGGAACATTCTAAGGAAGTCAGTGATTGTAAGAATTTGATCAAGACCTTAGTTATGGGAATGAAGACTATTATATGGAGCATCACT CATGCACATTTGCCACGATCACAGGTTTCTCCTTCCACGCATGGAACACATTCTCAAGTGCTTGTTTCACCGTCTTCTAGCTTACCGGCTCCCCAAGCAT TCAAAGGGATGAGAGAAGATGAGGTGTGGAAAGCCTCAGGTGTCCTGAAGAGTGGGGTGCATTGTTTAGCTCTCTTTAAGGAGAAGGATGAGGAGAGGGA CATGCTTAATCTATTTTCCCAAATACTGTCCATAATGGAACCTCGAGATCTTATGGACATGTTCTCATTGTGCATGCCTGAACTTTTTGAATGCATGATT AGCAATACTCAACTGGTTCACATTTTTTCTTCGCTTTTGCAATCTTCGAAAGTATATCGCCCATTTGCAGATGTCTTGGTTAACTTTCTTGTATGCAGCA AACTTGATGTTTTGAAGAACCCAGATTCACCTGCAGCAAAACTGGTTCTGAATCTCTTTCGGTTTATATTTGGTGCTGTCTCTAAAGCACCTGCAGAGTT TGAACGTATTTTGCAGCCTCATGTCCTTGTTATAATGGAAGTTTGCATGAAGAATGCTACTGAAGTTGAAAAACCTCTTGGTTATATGCAGCTTCTTCGA ACAATGTTTAGGGCTCTTGCTGGATGTAAATTTGAGCTTCTCCTCCGGGATCTGATTCCAATGTTACAGCCCTGCCTGAATATGTTATTGACAATGCTTG AGGGTCCAACTGGTGAAGATATGAGGGACCTTTTACTTGAACTATGCTTAACAATGCCTGCACGCTTAAGCTCATTGCTGCCGCACCTTCCACGTCTTAT GAGACCTCTTGTTTTGTGTCTGAAGGGAAGTGATGACCTAGTGAGTTTAGGTTTAAGAACACTTGAATTTTGGGTAGATAGTTTAAATCCTGATTTCCTG GAACCCAGTATGGCTAATGTCATGTCAGAGGTAATTTTATCCTTATGGTCTCACCTGAGGCCTGCACCTTATCCCTGGGGTGGAAAAGCTCTGCAACTCC TTGGCAAGTTAGGTGGCCGCAACAGACGTTTTCTTAAAGAGCCCCTTGCACCTGAATGCAAAGATAACCCAGAGCATGGGCTTCGTCTTATACTTACATT TGAGCCTTCAACTCCGTTTTTGGTGCCTTTGGATCGATGCATAAATCTTGCAGTAGCAGCTGTCATAAACAAAAACAGTGGCATGGATGCTTTCTACCGA AAACAGTCTTTGAAGTTCCTCCGTGTTTGCTTGTCATCTCAGCTTAATTTGCCTGGGAATGTTTCTGACGAGGGATATACAGCCAGAGAGCTGTCAACCA CCTTAGTTTCTGCAGTTGATTCATCCTGGCGTAGGTCCGAGACATCAGATATAAAGGCTGATTTAGGCGTGAAGACAAAAACCCAGCTTATGGCTGAGAA ATCAGTTTTCAAGATTCTGTTAATGACCATAATTGCTTCCAGTGCTGAACCAGATCTGCATGACCCCAAAGATGATTTTGTTGTCAATGTTTGCCGCCAT TTTGCTATGATATTTCATATAGATTATAACTCAAATAACCCTTCAATTCCAAGTGCTCTTGGTGGACCTATGCTTTCATCAAGTAGTAGTGTCAGTTCCA GGTCAAAGACTAGCACTAATCTGAAAGAGCTGGACCCTTTGATATTCTTGGATGCTTTGGTTGATGTGCTATCTGATGACAATAGGGTCCATGCCAAAGC TGCTCTAGGTGCTTTAAATATCTTTGCTGAAACACTTCTCTTCCTTGCTCGCTCAAAACATGGTGATGTGCTGATGTCAAGAGCAGGCCCTGGTACACCT ATGATTGTGTCTAGTCCATCAATGAATCCTGTATATTCACCACCCCCAAGTGTTTGCATCCCAGTTTTTGAGCAACTTCTTCCACGTCTTTTGCATTGTT GCTATGGAACGACATGGCAAGCACAGATGGGAGGTGTTATGGGACTTGGTGCTTTGGTGGGAAAGGTAACTGTTGAGACTCTGTGCCACTTCCAAGTAAG AATTGTGCGGGGTCTAGTCTATGTACTCAAAAGACTTCCTCCCTATGCAAGCAAAGAGCAGGATGAGACTAGTCAAGTGCTTACACAGGTTCTTCGTGTG GTGAATAATGTTGATGAAGCTAACAGTGAACCACGCAGGAAAAGTTTTCAAGGGGTAGTTGATTTTCTTGCTTCAGAATTGTTCAATCCCAATGCATCTA TTATTGTAAGAAAGAATGTGCAATCATGTTTGGCACTATTGGCTAGTAGGACTGGTAGTGAGGTATCAGAGTTACTTGAGCCTCTGTATCAGCCTTTGCT TCAGCCCCTTATCACACGGCCACTCAGGTCAAAGACTGTTGATCAACAGGTTGGGATAGTTACAGCTCTGAATTTTTGCCTGGCCTTGAGGCCGCCACTT CTCAAGTTGACTCAAGAGCTAGTTAACTTTCTGCAAGAAGCGTTGCAAATAGCAGAGGCTGATGAAAATGTATGGGCTGTGAAGTTTATGAACCCCAAGT ACACCTTGTCACTAAATAAGCTTCGAACAGCTTGCATTGAGCTACTCTGTACTGCTATGGCATGGGCTGATTTCAAGACTCAAAATCATTCTGAATTGCG TGCAAAGATCATTTCCATGTTCTTCAAGTCCTTGACATGTCGGACACCAGAAATTGTTGCTGTTGCCAAGGAGGGGTTACGCCAGGTTATTAACCAGCAA AGAATGCCGAAAGAACTTCTGCAGAGCAGCCTCAGGCCTATTCTAGTTAACTTGGCTCACACCAAGAATCTTAGCATGCCTCTTCTGCAAGGTCTGGCTC GCTTGCTTGAACTTTTGTCTAGCTGGTTTAATGTCACCCTGGGTGGTAAGCTGTTGGAGCACCTTAAGAAATGGATGGAACCTGACAAGCTTTCCCAGAG TATAAAGTCATGGAAGGCTGGTGAAGAGCCGAAAATTGCAGCAGCTATCATTGAGCTATTCCACTTACTTCCCCATGCTGCATCGAAGTTTCTTGATGAA CTTGTGACCTTGACTATTGATTTGGAAGGGGCTCTTCCTCCTGGACAAGTATACAGTGAAATTAACAGTCCATATCGTCTACCTCTTACAAAATTCTTAA ATCGATATGCAACACTAGCTGTTGATTATTTTCTTGCCCGATTAAGTGATCCAAAATACTTCAGGCGGTTCATGTACATTTTGAGATCAGATGCTGGCCA ACCATTGAGAGACGAGCTGGCTAAATCCCCCCAGAAAATACTTGCAAGTGCCTTTCCTGAGTTTCTGCCAAAATCAGACGTGGAGATGACTTCTAGCTCT TCAACTCCACCTTCTGCTTTGTTGGGTGAAGAAAGTCTTGTTGCCCCTCCAGCTGACGGTGCAAATTTACCATCTATCCCCACTGGTGCAACTTCGGATG CTTATTTTCAAGGTCTTGCACTTATTAAAATGCTGGTCAAATTGATACCGGGCTGGTTGCATAGTAATCAACTTGTGTTTGATACCTTGGTACTAGTATG GAAGTCACCCGCTAGAGTATCCCGTTTGCACAATGAACAGGAGTTAAACTTAGTGCAAGTTAAAGAAAGCAAATGGCTTGTCAAATGCTTCCTGAATTAC TTGCGTCATGACAAAAAAGAAGTTAATGTTCTCTTTGATATCCTCTCCATCTTCTTATTCCACAGTCGCATTGACTACACTTTTTTGAAGGAGTTTTATA TTATTGAGGTCGCAGAAGGATATCCGCCGAACATGAAGAGAGCGCTCCTCTTGCATTTCTTGAACCTTTTCCAATCAAAACAACTTGGTCATGATCATTT GGTGGTTGTTATGCAAATGCTCATTCTTCCGATGCTTGCTCATGCTTTCCAGAATGCCCAAAGCTGGGAGGTTGTTGACCCTGGTATTATAAAAACCATT GTTGACAAACTTCTTGATCCACCGGAAGAGGTTTCTGCTGAATATGATGAGCCTTTGAGGATAGAACTCTTGCAGCTCGCCACTTTACTGCTAAAATATC TCCAAAACGACCTTGTTCATCATCGGAAAGAGCTCATTAAATTTGGCTGGAATCATCTCAAACGTGAGGACAGTGCTAGTAAGCAGTGGGCATTTGTCAA TGTGTGCCATTTCTTGGAAGCCTATCAGGCCCCAGAAAAAATTATACTTCAGGTTTTTGTTGCACTTCTCAGAACTTGCCAGCCGGAAAATAAACTTCTG GTCAAGCAGGCTCTTGATATACTGATGCCAGCTTTACCACGGAGGTTGCCTCTCGGCGATTCTCGGATGCCAATTTGGATACGATACACAAAAAAAATTT TGGTTGAGGAAGGTCATTCGATTCCCAATCTGATTCACATTTTCCAGCTTATTGTGCGTCATTCAGATCTCTTCTACAGCTGCAGAGCACAGTTTGTTCC CCAAATGGTCAATTCTCTCAGTCGGCTTGGACTGCCATGCAACACAACAACAGAAAACAGGCGCCTTGCCATAGAACTTGCTGGGTTGGTCGTTGGCTGG GAAAGGCAAAGGCAACATGAAATGAAAGTCATGACTGATGGTGATGTCCCCAGTCAGTCTAATGATGGATTTAACCCTGGGTCTGCTGGTACTGATTCTA AGCGTGCTGTGGATGGATCTACCTTCCCTGAAGATGCAAGTAAGAGAGTTAAAGTGGAACCTGGTCTTCAATCCATCTGTGTCATGTCACCTGGTGTTGC CTCATCAATACCAAATATAGAAACCCCTGGACCTGGTGGCCAACCTGATGAAGAATTCAAGCCTAATGCTGCTATGGAAGAAATGATTATCAATTTTCTT ATAAGAGTTGCCTTGGTCATAGAGCCCAAGGACAAGGAAGCTACTACTATGTACAAACAAGCCTTGGAGCTACTTTCACAAGCTTTGGAGGTGTGGCCCA ATGCTAATGTTAAGTTCAATTACTTAGAAAAATTGTTCAACAGCATGCAACCATCACAGTCAAAGGATCCTTCTACAGCTCTTGCTCAGGGCTTGGATGT AATGAATAAGGTCTTGGAGAAGCAACCTCATTTGTTCATTAGAAATAACATAAACCAGATCTCTCAGATTCTAGAACCCTGTTTCAAGCAGAAAATGTTA GATGCTGGAAAGTCATTGTGCTCGCTGTTGAAGATGGTTTTTGTTGCTTTTCCACCAGATGTGGCCAGTACACCACCTGATGTGAAGCTATTGTATCAGA AGGTCGATGACTTGATACAGAAGCACATTGACTCTGTTACCTCTCCTCAGACATTGGGTGAGGATACATCTGTTAGTTCGATTTCCTTTGTACTGCTTGT CATCAAAACCCTGACAGAGGTGGGGAAGTACATTGAACCACCCATATTGGTTCGTATCCTTCAACGACTAGCACGTGATATGGGATCATCAGCAGGTTCT CATTTGAGACAAGGTCAGCGAACCGATCCGGATTCGGCAGTGTCTTCTTCTCGTCAAGGTGCTGATCTCGGAGCAGTCATCTGTAATCTAAAATCCGTGC TGAAGCTTATTTGTGAAAAAGTGATGGTTGTTCCTGATTGCAAACGATCTGTAACTCAAGTCTTGAATGCCTTGCTTTCAGAGAAGGGCACCGATTCTAG CGTGCTTCTTTGCATTTTAGATGTTATAAAAGGGTGGATTGAAGATGATTTCTGCAAACCAGGAAGAGTCACATCAAGCGGTTTTATCAGTCATAAGGAA ATAGTCTCTTTTCTTCAAAAGCTGTCACAAGTTGATAAGCAAAACTTCGGTCCTGATGCTCATGAAGATTGGGACAGGAAATATCTTCAGCTTCTTTATG GAATTTGTGCTGATTCAAAATATTTGTTGGCCCTACGCCAGGAGGTGTTTCAGAAGGTGGAAAGACAATTCATGCTTGGTTTACGAGCAAGAGATCCTGA CATTAGGAAGAAATTCTTTTTGCTTTATCATGAATCTCTTGGGAAATCATTGTTTACAAGACTGCAATATATTATCCAACTCCAGGACTGGGAAGCTTTA AGTGATGTTTTCTGGCTCAAACAGGGTCTTGATCTTCTTCTGGCAATCTTAGTTGAGGACAAACCAATCACTCTTGCCCCTAATTCTGCCAGGGTTCAGC CAGTTGTGGTCTCAAGTTCCCTTCCGGATAGTTCTGGGATGCAGCAACTGGTTGCTGATGTTCCAGAGGGTTCTGAGGAAGCTCCTCTCACTTTTGATAG TCTTGTTCTTAAGCATGCTCAGTTTCTGAATGAGATGAATAAACTTCAGGTGGCTGATCTGGTTATTCCATTAAGAGAACTGGCCCATACAGATGCAAAT GTCGCATACCAATTGTGGGTGCTGGTATTTCCCATTGTCTGGGTGACCCTGCACAAAGAAGAACAAGTTACATTAGCTAAACCAATGATTACTCTCTTAT CAAAAGATTATCACAAGAAGCAGCAAGCCAGTAGACCAAATGTGGTGCAAGCTCTCCTAGAAGGCCTTAAGTGGAGCCACCCACAACCTCGGATGCCAAG TGAGCTTATTAAGTACATTGGAAAAACATATAATGCATGGCACATAGCCTTGGCTTTGTTAGAAAGTCATGTCATGCTATTCATGAATGAAACAAAGTGC TCTGAGTCTCTGGCTGAGCTTTATCGTTTGCTCAATGAAGAAGATATGAGATGTGGGCTGTGGAAAAAGAGGTCAATCACTGCAGAAACTAGAGCTGGAC TTTCACTAGTTCAGCATGGTTACTGGCAGCGTGCTCAAAGCCTCTTTTATCAAGCCATGGTTAAGGCAACACAAGGCACGTATAATAACACAGTACCTAA GGCTGAGATGTGTCTCTGGGAAGAGCAGTGGCTTTACTGTGCAAGTCAATTGAGTCAGTGGGATGCATTGGTTGACTTTGGTAAAAGCATGGAGAATTAT GAAATTCTCCTTGATAGCCTCTGGAAATTGCCTGATTGGACGTATATGAAGGATCATGTGATCCCTAAGGCTCAAGTAGAAGAAACTCCAAAACTCCGTT TAATTCAAGCCTTTTTTGCGCTTCATGATAGAAATACAAATGGTGTGGGCGATGCAGAAAACACAGTGGGAAAAGGAGTTGATCTTGCTTTAGAACAGTG GTGGCAGTTGCCTGAAATGTCTGTACATTCCAGGATTCCTCTTTTGCAGCAATTCCAGCAGCTCATTGAAGTTCAAGAATCTGCTCGAATTCTTGTAGAC ATTGCAAATGGAAACAAACTTTCTAGCACTTCTGTTGGTGTGCATGGTAATCTCTATGCAGATCTCAAGGACATCCTTGAAACTTGGAGACTGAGAACCC CAAATGAATGGGATAACATGTCTGTTTGGTATGATCTGCTCCAGTGGCGTAATGAAATGTATAATTCTGTAATTGATGCATTCAAGGATTTTGTAACCAC AAATCCACAACTTTATCACCTCGGATTTCGTGACAAAGCATGGAATGTGAATAAGCTTGCTCATATTGCTCGTAAGCAAGGCCTTAATGATGTTTGTGTA ACAATTCTTGAAAAGATGTATGGCCATTCAACCATGGAAGTGCAGGAAGCTTTTGTTAAGATAAGAGAGCAGGCAAAGGCTTATCTAGAGATGAAGGGAG AGCTTACCAGTGGTCTCAATTTGATTAACAGCACAAATCTGGAATATTTTCCTGTGAAACACAAAGCTGAGATTTTTCGTCTTAGAGGGGATTTTTTGTT GAAGCTTAATGACTCTGAAGATGCCAATATTGCATATTCAAATGCTATCAGCGTTTTCAAAAACTTGCCTAAAGGATGGATAAGCTGGGGGAATTATTGT GACACGGCTTATCGAGATACTCAAGATGAAATTTGGCTGGAATATGCTGTTAGCTGCTTTCTTCAAGGTATCAAATTTGGTGTTTCCAATTCCAGAAGCC ATCTAGCTCGGGTGCTGTATCTTCTCAGCTTTGATACTCCCAGTGAATCTGTGGGGAGAGCATTTGATAAATACTTGGACCAAATACCCCACTGGGTTTG GCTTTCGTGGATTCCACAGCTATTACTTTCTTTGCAGAGGACAGAGGCACCTCATTGCAAACTTGTTCTACTGAAAATTGCCACGGTGTTTCCACAGGCT TTGTATTACTGGCTCCGCACATATTTGCTTGAGCGTCGTGATGTTGCAAATAAATCTGAACTAGGTAGATTGGCAATGGCTCAGCAAAGAATGCAGCAAA ATGCATCTGGTGCTGGGGCTGCTTCTCTTGGATTGACTGATGGAAATGCGAGAGTGCAGAGTCATGGAGGCGGTGGTGCTTTAGCCACAGACAATACTGT TCATCAAGGCACTCAGTCTAGTGGTGGGATTGGGTCTCATGATGGTGGAAACACTCATGGACATGAACCTGAAAGATCCACAGCAGTTGAAAGCAGTGTG CATGCGGGGAATGATCAAACTTTACAACAAAGTTCTTCGATGATCAGTGAAAGTGGTCAGAATGCTGTGAGGCGTAATGTTGCTTTGGGCTTTGTTGCTT CTGCTGCCAGTGCTTTTGAAGCTGCAAAGGAGATAATGGAGGCTCTTAGAAGCAAACACAGTAATTTGGCTAGTGAACTTGAGATTCTACTTACAGAAAT TGGTTCCCGGTTTGTGACTCTGCCAGAGGAGAGACTTCTTGCTGTGGTTAATGCACTGCTCCACCGCTGCTACAAGTACCCAACTGCCACTACAGGAGAG GTTCCCCAATCTCTCAAGAAAGAACTCTCTGGTGTTTGCAGGGCTTGCTTCTCTGTTGATGCTGTGAACAAGCATGTTGATTTTGTGAGAGATTACAAAC AGGATTTTGAGCGTGATCTTGATCCGGAAAGCATAGCTACTTTCCCTGCCACTCTTTCCGAACTGACTGCTCGATTGAAACATTGGAAAAATGTTCTACA GAGCAATGTAGAGGACCGGTTTCCAACTGTCTTGAAACTTGAAGAGGAAAGCAGGGTTCTGCGTGACTTTCATGTTGTTGATGTAGAGGTTCCAGGACAG TATTTTTGTGATCAGGAAATTGCACCAGACCACACAGTTAAGTTAGACAGGGTTGGAGCTGACATTCCAATTGTTCGAAGGCATGGAAGCAGCTTCAGGC GTCTGACTCTTATCGGTTCTGATGGTTCTCAACGTCATTTCATTGTCCAGACATCCTTGACCCCTAATGCAAGAAGTGATGAACGAATACTGCAGCTTTT CCGTGTAATGAACCAGATGTTTGATAAGCACAAAGAATCAAGACGTCGTCATATATGCATTCACACTCCAATCATCATTCCTGTTTGGTCCCAGGTCCGC ATGGTCGAAGATGATTTAATGTATAGCACTTTTCTTGAAGTGTATGAGAACCATTGTGCAAGGAATGACCGAGAAGCAGATCTCCCAATCACCTACTTCA AGGAGCAACTAAACCAAGCTATATCTGGCCAAATCTCTCCTGAAGCTGTTGTAGATCTTCGCCTCCAAGCTTACAATGAGATAACTAAGATTTATGTGTC TGATGGCATCTTTTCCCAGTATATGTACAAGACTCTTCTGAATGGCAATCATATGTGGGCTTTTAAAAAGCAATTTGCAATCCAGTTAGCGCTTTCAAGT TTCATGTCTTTCATGCTGCAGATCGGAGGAAGGTCCCCAAATAAGATACTATTTGCTAAGAACACTGGCAAGATTTTCCAGACAGATTTTCACCCTGCAT ATGATGCAAATGGCATGATTGAGTTCAATGAACCCGTTCCTTTTCGGCTAACAAGGAACATGCAGGCATTCTTCTCCCATTTTGGAGTAGAAGGTCTTAT TGTGTCTGCCATGTGTGCTGCAGCACAGGCTGTGGTTTCACCAAAACAAAGCAAACATTTATGGCATCAATTAGCCATGTTTTTCCGTGATGAACTTCTG TCTTGGTCTTGGAGACGACCACTTGGGTTGAATCTGGGACCTGCTGCCAGTGGGAGTAGTATGAACCCTGCTGATTTCAAGCATAAGGTCACTACCAACG TAGACAATGTCATCAACCGTATCACTGGAATTGCTCCACAGTATCTCTCTGAAGAGGAGGAAAATGCTGTGGACCCACCACAGTCGGTGCAGAGGGGTGT CACTGAGTTGGTAGAAGCTGCTTTGACACCAAGGAACTTGTGCATGATGGATCCAACATGGCATCCCTGGTTTTAA
AA sequence Show only first row Show all	>Potri.005G114300.1 pacid=42804186 polypeptide=Potri.005G114300.1.p locus=Potri.005G114300 ID=Potri.005G114300.1.v4.1 annot-version=v4.1 MSPIQNFEQHSRHLVEPDLPIQTRLQMAMEVRDSLEIAHTAEYLNFLKCYFPASSIILLQITKPQFVDNSEHKLRNIVVEILNRLPHSEVLRPFVQDLLK VAMQVLTTDNEENGLICIRIIFDLLRNFRPTLENEVQPFLDFVCKIYQNFRLTVSHFFDNASAAVEDVKPMEISTSSDQGLLSTGHIGNGQLNPSTRSFK IVTESPLVVMFLFQLYSRLVQTNIPHLLPLMVAAISVPGPDKVPPHLKTNFIELKGAQVKTVSFLTYLLKSFADYIRPHEESICKSIVNLLVTCSDSVAI RKELLVALKHVLGTDFKRGLFPLIDTLLEERVLVGTGRACYETLRPLAYSLLAEIVHHVRSDLSLSQLSRIIYLFSSNMHDASLSLSIHTTCARLMLNLV EPIFEKGVDHSTMDEARILLGRILDAFVGKFSTFKRTIPQLLEEGEDGKERATLRSKLELPVQAVLNLQVPVEHSKEVSDCKNLIKTLVMGMKTIIWSIT HAHLPRSQVSPSTHGTHSQVLVSPSSSLPAPQAFKGMREDEVWKASGVLKSGVHCLALFKEKDEERDMLNLFSQILSIMEPRDLMDMFSLCMPELFECMI SNTQLVHIFSSLLQSSKVYRPFADVLVNFLVCSKLDVLKNPDSPAAKLVLNLFRFIFGAVSKAPAEFERILQPHVLVIMEVCMKNATEVEKPLGYMQLLR TMFRALAGCKFELLLRDLIPMLQPCLNMLLTMLEGPTGEDMRDLLLELCLTMPARLSSLLPHLPRLMRPLVLCLKGSDDLVSLGLRTLEFWVDSLNPDFL EPSMANVMSEVILSLWSHLRPAPYPWGGKALQLLGKLGGRNRRFLKEPLAPECKDNPEHGLRLILTFEPSTPFLVPLDRCINLAVAAVINKNSGMDAFYR KQSLKFLRVCLSSQLNLPGNVSDEGYTARELSTTLVSAVDSSWRRSETSDIKADLGVKTKTQLMAEKSVFKILLMTIIASSAEPDLHDPKDDFVVNVCRH FAMIFHIDYNSNNPSIPSALGGPMLSSSSSVSSRSKTSTNLKELDPLIFLDALVDVLSDDNRVHAKAALGALNIFAETLLFLARSKHGDVLMSRAGPGTP MIVSSPSMNPVYSPPPSVCIPVFEQLLPRLLHCCYGTTWQAQMGGVMGLGALVGKVTVETLCHFQVRIVRGLVYVLKRLPPYASKEQDETSQVLTQVLRV VNNVDEANSEPRRKSFQGVVDFLASELFNPNASIIVRKNVQSCLALLASRTGSEVSELLEPLYQPLLQPLITRPLRSKTVDQQVGIVTALNFCLALRPPL LKLTQELVNFLQEALQIAEADENVWAVKFMNPKYTLSLNKLRTACIELLCTAMAWADFKTQNHSELRAKIISMFFKSLTCRTPEIVAVAKEGLRQVINQQ RMPKELLQSSLRPILVNLAHTKNLSMPLLQGLARLLELLSSWFNVTLGGKLLEHLKKWMEPDKLSQSIKSWKAGEEPKIAAAIIELFHLLPHAASKFLDE LVTLTIDLEGALPPGQVYSEINSPYRLPLTKFLNRYATLAVDYFLARLSDPKYFRRFMYILRSDAGQPLRDELAKSPQKILASAFPEFLPKSDVEMTSSS STPPSALLGEESLVAPPADGANLPSIPTGATSDAYFQGLALIKMLVKLIPGWLHSNQLVFDTLVLVWKSPARVSRLHNEQELNLVQVKESKWLVKCFLNY LRHDKKEVNVLFDILSIFLFHSRIDYTFLKEFYIIEVAEGYPPNMKRALLLHFLNLFQSKQLGHDHLVVVMQMLILPMLAHAFQNAQSWEVVDPGIIKTI VDKLLDPPEEVSAEYDEPLRIELLQLATLLLKYLQNDLVHHRKELIKFGWNHLKREDSASKQWAFVNVCHFLEAYQAPEKIILQVFVALLRTCQPENKLL VKQALDILMPALPRRLPLGDSRMPIWIRYTKKILVEEGHSIPNLIHIFQLIVRHSDLFYSCRAQFVPQMVNSLSRLGLPCNTTTENRRLAIELAGLVVGW ERQRQHEMKVMTDGDVPSQSNDGFNPGSAGTDSKRAVDGSTFPEDASKRVKVEPGLQSICVMSPGVASSIPNIETPGPGGQPDEEFKPNAAMEEMIINFL IRVALVIEPKDKEATTMYKQALELLSQALEVWPNANVKFNYLEKLFNSMQPSQSKDPSTALAQGLDVMNKVLEKQPHLFIRNNINQISQILEPCFKQKML DAGKSLCSLLKMVFVAFPPDVASTPPDVKLLYQKVDDLIQKHIDSVTSPQTLGEDTSVSSISFVLLVIKTLTEVGKYIEPPILVRILQRLARDMGSSAGS HLRQGQRTDPDSAVSSSRQGADLGAVICNLKSVLKLICEKVMVVPDCKRSVTQVLNALLSEKGTDSSVLLCILDVIKGWIEDDFCKPGRVTSSGFISHKE IVSFLQKLSQVDKQNFGPDAHEDWDRKYLQLLYGICADSKYLLALRQEVFQKVERQFMLGLRARDPDIRKKFFLLYHESLGKSLFTRLQYIIQLQDWEAL SDVFWLKQGLDLLLAILVEDKPITLAPNSARVQPVVVSSSLPDSSGMQQLVADVPEGSEEAPLTFDSLVLKHAQFLNEMNKLQVADLVIPLRELAHTDAN VAYQLWVLVFPIVWVTLHKEEQVTLAKPMITLLSKDYHKKQQASRPNVVQALLEGLKWSHPQPRMPSELIKYIGKTYNAWHIALALLESHVMLFMNETKC SESLAELYRLLNEEDMRCGLWKKRSITAETRAGLSLVQHGYWQRAQSLFYQAMVKATQGTYNNTVPKAEMCLWEEQWLYCASQLSQWDALVDFGKSMENY EILLDSLWKLPDWTYMKDHVIPKAQVEETPKLRLIQAFFALHDRNTNGVGDAENTVGKGVDLALEQWWQLPEMSVHSRIPLLQQFQQLIEVQESARILVD IANGNKLSSTSVGVHGNLYADLKDILETWRLRTPNEWDNMSVWYDLLQWRNEMYNSVIDAFKDFVTTNPQLYHLGFRDKAWNVNKLAHIARKQGLNDVCV TILEKMYGHSTMEVQEAFVKIREQAKAYLEMKGELTSGLNLINSTNLEYFPVKHKAEIFRLRGDFLLKLNDSEDANIAYSNAISVFKNLPKGWISWGNYC DTAYRDTQDEIWLEYAVSCFLQGIKFGVSNSRSHLARVLYLLSFDTPSESVGRAFDKYLDQIPHWVWLSWIPQLLLSLQRTEAPHCKLVLLKIATVFPQA LYYWLRTYLLERRDVANKSELGRLAMAQQRMQQNASGAGAASLGLTDGNARVQSHGGGGALATDNTVHQGTQSSGGIGSHDGGNTHGHEPERSTAVESSV HAGNDQTLQQSSSMISESGQNAVRRNVALGFVASAASAFEAAKEIMEALRSKHSNLASELEILLTEIGSRFVTLPEERLLAVVNALLHRCYKYPTATTGE VPQSLKKELSGVCRACFSVDAVNKHVDFVRDYKQDFERDLDPESIATFPATLSELTARLKHWKNVLQSNVEDRFPTVLKLEEESRVLRDFHVVDVEVPGQ YFCDQEIAPDHTVKLDRVGADIPIVRRHGSSFRRLTLIGSDGSQRHFIVQTSLTPNARSDERILQLFRVMNQMFDKHKESRRRHICIHTPIIIPVWSQVR MVEDDLMYSTFLEVYENHCARNDREADLPITYFKEQLNQAISGQISPEAVVDLRLQAYNEITKIYVSDGIFSQYMYKTLLNGNHMWAFKKQFAIQLALSS FMSFMLQIGGRSPNKILFAKNTGKIFQTDFHPAYDANGMIEFNEPVPFRLTRNMQAFFSHFGVEGLIVSAMCAAAQAVVSPKQSKHLWHQLAMFFRDELL SWSWRRPLGLNLGPAASGSSMNPADFKHKVTTNVDNVINRITGIAPQYLSEEEENAVDPPQSVQRGVTELVEAALTPRNLCMMDPTWHPWF

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT2G17930			Phosphatidylinositol 3- and 4-...		Potri.005G114300 [exp]	0	1
AT2G28290		CHR3, SYD	SPLAYED, CHROMATIN REMODELING ...		Potri.008G195900 [exp]	1.41	0.9291
AT1G24300			GYF domain-containing protein ...		Potri.001G326700 [exp]	2.44	0.9094
AT1G55860		UPL1	ubiquitin-protein ligase 1 (.1...		Potri.002G110500 [exp]	2.64	0.8923
AT1G48090			calcium-dependent lipid-bindin...		Potri.008G100600 [exp]	2.82	0.8998
AT1G24300			GYF domain-containing protein ...		Potri.017G069220 [exp]	3.00	0.9083
AT1G02080			transcription regulators (.1.2...		Potri.002G143000 [exp]	3.16	0.8855
AT1G55860		UPL1	ubiquitin-protein ligase 1 (.1...		Potri.001G368600 [exp]	3.16	0.8954
AT4G32820			Tetratricopeptide repeat (TPR)...		Potri.018G057900 [exp]	4.24	0.8933
AT3G24180			Beta-glucosidase, GBA2 type fa...		Potri.003G178000 [exp]	5.47	0.8600
AT1G02080			transcription regulators (.1.2...		Potri.014G058800 [exp]	7.21	0.8642

Compare expression of checked genes

Potri.005G114300 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.