Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol	Pt-MPK7.1
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G18170 662 / 0 ATMPK7 MAP kinase 7 (.1) AT1G10210 631 / 0 ATMPK1 mitogen-activated protein kinase 1 (.1.2) AT4G36450 619 / 0 ATMPK14 mitogen-activated protein kinase 14 (.1) AT1G59580 607 / 0 ATMPK2 mitogen-activated protein kinase homolog 2 (.1.2) AT1G07880 424 / 1e-148 ATMPK13 Protein kinase superfamily protein (.1.2) AT4G01370 421 / 4e-147 ATMPK4 MAP kinase 4 (.1) AT3G45640 414 / 3e-144 ATMAPK3, ATMPK3 mitogen-activated protein kinase 3 (.1) AT4G11330 409 / 2e-142 ATMPK5 MAP kinase 5 (.1) AT2G43790 408 / 9e-142 ATMAPK6, MAPK6, ATMPK6 MAP kinase 6 (.1) AT1G01560 397 / 1e-137 ATMPK11 MAP kinase 11 (.1.2)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.007G020100 [exp] 714 / 0 AT2G18170 654 / 0.0 MAP kinase 7 (.1) Potri.002G032100 [exp] 645 / 0 AT1G59580 624 / 0.0 mitogen-activated protein kinase homolog 2 (.1.2) Potri.005G231100 [exp] 643 / 0 AT1G59580 617 / 0.0 mitogen-activated protein kinase homolog 2 (.1.2) Potri.007G139800 [exp] 422 / 3e-147 AT2G43790 684 / 0.0 MAP kinase 6 (.1) Potri.003G131800 [exp] 418 / 1e-145 AT4G01370 656 / 0.0 MAP kinase 4 (.1) Potri.001G099900 [exp] 417 / 2e-145 AT4G01370 657 / 0.0 MAP kinase 4 (.1) Potri.017G010200 [exp] 417 / 2e-145 AT2G43790 677 / 0.0 MAP kinase 6 (.1) Potri.009G066100 [exp] 416 / 3e-145 AT3G45640 652 / 0.0 mitogen-activated protein kinase 3 (.1) Potri.002G162500 [exp] 416 / 4e-145 AT4G01370 684 / 0.0 MAP kinase 4 (.1)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10033197 [exp] 627 / 0 AT1G10210 660 / 0.0 mitogen-activated protein kinase 1 (.1.2) Lus10025986 [exp] 626 / 0 AT2G18170 617 / 0.0 MAP kinase 7 (.1) Lus10010637 [exp] 626 / 0 AT1G59580 657 / 0.0 mitogen-activated protein kinase homolog 2 (.1.2) Lus10014283 [exp] 620 / 0 AT2G18170 611 / 0.0 MAP kinase 7 (.1) Lus10017518 [exp] 426 / 4e-149 AT4G01370 632 / 0.0 MAP kinase 4 (.1) Lus10028765 [exp] 424 / 4e-148 AT4G01370 630 / 0.0 MAP kinase 4 (.1) Lus10024668 [exp] 423 / 8e-148 AT4G01370 657 / 0.0 MAP kinase 4 (.1) Lus10007921 [exp] 421 / 5e-147 AT4G01370 689 / 0.0 MAP kinase 4 (.1) Lus10018127 [exp] 417 / 2e-145 AT3G45640 652 / 0.0 mitogen-activated protein kinase 3 (.1) Lus10036136 [exp] 415 / 1e-144 AT3G45640 654 / 0.0 mitogen-activated protein kinase 3 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0016 [poplar] [flax] PKinase PF00069 [poplar] [flax] Pkinase Protein kinase domain
Representative CDS sequence Show only first row Show all	>Potri.005G119500.4 pacid=42804162 polypeptide=Potri.005G119500.4.p locus=Potri.005G119500 ID=Potri.005G119500.4.v4.1 annot-version=v4.1 ATGACAATTTGCAGGGAAATGGCAACTTTAGTGGAGCCTCCGAATGGAATTAGGCCAAGCGGGAAGCAATATTACTCAATGTGGCACACTGTATTTGAGC TTGATTCAAAGTATGTTCCAATTAAGCCTATAGGTAAAGGGGCTTATGGTGTTGTTTGCTCTTCGATTAATCGGGAAACAAATGAGAAAGTTGCCATCAA GAAAATCAATAATGTGTTTGAGAACAAGATTGATGCTTTGAGGACTCTGAGAGAGTTGAAGCTTCTTAGACATATCCGGCATGAGAATGTAATTGCTCTG AAGGATGTTTTGATGCCTATTCATAGGACAAGTTTCAAGGATGTGTATTTGGTTTATGAGCTCATGGATACAGATTTGCATCAGATTATCAAGTCCTCAC AACCACTTTCCAGTGATCATTGCAAGTATTTTATATTTCAGTTGCTACGTGGGCTGAATTATCTCCACTCTGCAAACATTCTTCATCGGGACCTGAAGCC TGGAAATCTCCTTGTCAATGCTAACTGCGACCTGAAGATATGTGATTTTGGGCTGGCACGAACAAGCAGAGGCAATGAACAGTTCATGACTGAGTATGTT GTTACCCGATGGTATCGTGCACCTGAGCTGCTACTCTGCTGTGACAATTATGGAACCTCCATTGATGTCTGGTCTGTCGGATGTATCTTTGCTGAGATTC TTGGCCGCAAACCTATCTTCCCTGGAACAGAATGTCTGAACCAGCTGAAGCTAATTATCAGTGTCCTCGGGAGCCAAAATGATACTGATCTAGAGTTCAT TGACAACCCAAAAGCCAGGAGGTACATCAAAACACTTCCTTATACAAGGGGAACCCATCTCTCACACCTGTACCCTCATGCTGATCCTCTGGCCTTAGAC TTGTTGCAAAGGATGCTGGTGTTTGATCCTAGCAAGAGAATTACAGTGACAGAAGCACTTCTACACCCTTACATATCAGGGCTGTACGATCCAAGACGCG ACCCACCAGCACAGGTTCCTATCAATCTTGACATAGATGAGAATCTTGGGGAACATATGATTAGGGAGATGATATGGGATGAGATGCTTCATTACCACCC TGAAGCTGTGTTAGCTCGTAGATAG
AA sequence Show only first row Show all	>Potri.005G119500.4 pacid=42804162 polypeptide=Potri.005G119500.4.p locus=Potri.005G119500 ID=Potri.005G119500.4.v4.1 annot-version=v4.1 MTICREMATLVEPPNGIRPSGKQYYSMWHTVFELDSKYVPIKPIGKGAYGVVCSSINRETNEKVAIKKINNVFENKIDALRTLRELKLLRHIRHENVIAL KDVLMPIHRTSFKDVYLVYELMDTDLHQIIKSSQPLSSDHCKYFIFQLLRGLNYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYV VTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVLGSQNDTDLEFIDNPKARRYIKTLPYTRGTHLSHLYPHADPLALD LLQRMLVFDPSKRITVTEALLHPYISGLYDPRRDPPAQVPINLDIDENLGEHMIREMIWDEMLHYHPEAVLARR

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT2G18170		ATMPK7	MAP kinase 7 (.1)		Potri.005G119500 [exp]	0	1	Pt-MPK7.1
AT4G38470		STY46	serine/threonine/tyrosine kina...		Potri.002G070000 [exp]	2.23	0.7664
AT1G17290		ALAAT1	alanine aminotransferas (.1)		Potri.001G162800 [exp]	13.07	0.6739	Pt-ALAAT1.1
AT4G27590			Heavy metal transport/detoxifi...		Potri.015G003800 [exp]	47.14	0.7325
					Potri.001G182801 [exp]	57.59	0.7208
AT1G60010			unknown protein		Potri.010G095400 [exp]	60.31	0.7351
AT5G05700		ATATE1, DLS1, A...	DELAYED LEAF SENESCENCE 1, arg...		Potri.008G067000 [exp]	69.04	0.6635	Pt-ATE1.3
AT5G59960			unknown protein		Potri.009G028500 [exp]	69.28	0.6917
AT3G48270		CYP71A26	"cytochrome P450, family 71, s...		Potri.015G085800 [exp]	69.91	0.7266	Pt-CYP71.2
AT3G47295			unknown protein		Potri.009G047200 [exp]	86.87	0.6796
AT1G22370		ATUGT85A5	UDP-glucosyl transferase 85A5 ...		Potri.006G023700 [exp]	87.41	0.7257

Compare expression of checked genes

Potri.005G119500 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.