Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol	IFS1.49
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G36220 496 / 6e-173 CYP91A1, CYP81D1 CYTOCHROME P450 91A1, cytochrome P450, family 81, subfamily D, polypeptide 1, cytochrome p450 81d1 (.1) AT4G37370 486 / 3e-169 CYP81D8 "cytochrome P450, family 81, subfamily D, polypeptide 8", cytochrome P450, family 81, subfamily D, polypeptide 8 (.1) AT4G37340 474 / 2e-164 CYP81D3 "cytochrome P450, family 81, subfamily D, polypeptide 3", cytochrome P450, family 81, subfamily D, polypeptide 3 (.1) AT4G37320 468 / 1e-161 CYP81D5 "cytochrome P450, family 81, subfamily D, polypeptide 5", cytochrome P450, family 81, subfamily D, polypeptide 5 (.1) AT5G57220 465 / 9e-161 CYP81F2 "cytochrome P450, family 81, subfamily F, polypeptide 2", cytochrome P450, family 81, subfamily F, polypeptide 2 (.1) AT2G23190 467 / 1e-160 CYP81D7 "cytochrome P450, family 81, subfamily D, polypeptide 7", cytochrome P450, family 81, subfamily D, polypeptide 7 (.1) AT4G37330 464 / 3e-160 CYP81D4 "cytochrome P450, family 81, subfamily D, polypeptide 4", cytochrome P450, family 81, subfamily D, polypeptide 4 (.1) AT4G37360 463 / 7e-160 CYP81D2 "cytochrome P450, family 81, subfamily D, polypeptide 2", cytochrome P450, family 81, subfamily D, polypeptide 2 (.1) AT4G37430 456 / 2e-157 CYP81F1, CYP91A2 "cytochrome P450, family 91, subfamily A, polypeptide 2", CYTOCHROME P450 MONOOXYGENASE 81F1, cytochrome P450, family 91, subfamily A, polypeptide 2 (.1) AT4G37310 457 / 3e-157 CYP81H1 "cytochrome P450, family 81, subfamily H, polypeptide 1", cytochrome P450, family 81, subfamily H, polypeptide 1 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.007G049900 [exp] 941 / 0 AT4G37370 490 / 1e-170 "cytochrome P450, family 81, subfamily D, polypeptide 8", cytochrome P450, family 81, subfamily D, polypeptide 8 (.1) Potri.007G115500 [exp] 640 / 0 AT4G37370 506 / 2e-176 "cytochrome P450, family 81, subfamily D, polypeptide 8", cytochrome P450, family 81, subfamily D, polypeptide 8 (.1) Potri.005G143900 [exp] 638 / 0 AT4G37370 511 / 5e-179 "cytochrome P450, family 81, subfamily D, polypeptide 8", cytochrome P450, family 81, subfamily D, polypeptide 8 (.1) Potri.005G143800 [exp] 604 / 0 AT4G37370 539 / 0.0 "cytochrome P450, family 81, subfamily D, polypeptide 8", cytochrome P450, family 81, subfamily D, polypeptide 8 (.1) Potri.003G008200 [exp] 592 / 0 AT4G37370 531 / 0.0 "cytochrome P450, family 81, subfamily D, polypeptide 8", cytochrome P450, family 81, subfamily D, polypeptide 8 (.1) Potri.003G007000 [exp] 586 / 0 AT4G37370 525 / 0.0 "cytochrome P450, family 81, subfamily D, polypeptide 8", cytochrome P450, family 81, subfamily D, polypeptide 8 (.1) Potri.008G205200 [exp] 586 / 0 AT4G37370 524 / 0.0 "cytochrome P450, family 81, subfamily D, polypeptide 8", cytochrome P450, family 81, subfamily D, polypeptide 8 (.1) Potri.003G006000 [exp] 584 / 0 AT4G37370 526 / 0.0 "cytochrome P450, family 81, subfamily D, polypeptide 8", cytochrome P450, family 81, subfamily D, polypeptide 8 (.1) Potri.003G007900 [exp] 562 / 0 AT4G37370 524 / 0.0 "cytochrome P450, family 81, subfamily D, polypeptide 8", cytochrome P450, family 81, subfamily D, polypeptide 8 (.1)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10020437 [exp] 519 / 0 AT4G37370 630 / 0.0 "cytochrome P450, family 81, subfamily D, polypeptide 8", cytochrome P450, family 81, subfamily D, polypeptide 8 (.1) Lus10011958 [exp] 487 / 3e-169 AT5G36220 548 / 0.0 CYTOCHROME P450 91A1, cytochrome P450, family 81, subfamily D, polypeptide 1, cytochrome p450 81d1 (.1) Lus10018717 [exp] 475 / 3e-164 AT4G37370 533 / 0.0 "cytochrome P450, family 81, subfamily D, polypeptide 8", cytochrome P450, family 81, subfamily D, polypeptide 8 (.1) Lus10024816 [exp] 442 / 2e-151 AT4G37370 506 / 2e-176 "cytochrome P450, family 81, subfamily D, polypeptide 8", cytochrome P450, family 81, subfamily D, polypeptide 8 (.1) Lus10024819 [exp] 441 / 1e-150 AT4G37320 493 / 3e-171 "cytochrome P450, family 81, subfamily D, polypeptide 5", cytochrome P450, family 81, subfamily D, polypeptide 5 (.1) Lus10027614 [exp] 433 / 6e-149 AT4G37370 496 / 6e-174 "cytochrome P450, family 81, subfamily D, polypeptide 8", cytochrome P450, family 81, subfamily D, polypeptide 8 (.1) Lus10024818 [exp] 421 / 3e-143 AT4G37320 480 / 2e-166 "cytochrome P450, family 81, subfamily D, polypeptide 5", cytochrome P450, family 81, subfamily D, polypeptide 5 (.1) Lus10018711 [exp] 419 / 1e-142 AT4G37370 441 / 5e-151 "cytochrome P450, family 81, subfamily D, polypeptide 8", cytochrome P450, family 81, subfamily D, polypeptide 8 (.1) Lus10024820 [exp] 407 / 8e-138 AT5G36220 493 / 2e-171 CYTOCHROME P450 91A1, cytochrome P450, family 81, subfamily D, polypeptide 1, cytochrome p450 81d1 (.1) Lus10041643 [exp] 400 / 1e-134 AT4G37320 433 / 6e-148 "cytochrome P450, family 81, subfamily D, polypeptide 5", cytochrome P450, family 81, subfamily D, polypeptide 5 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF00067 [poplar] [flax] p450 Cytochrome P450
Representative CDS sequence Show only first row Show all	>Potri.005G144000.1 pacid=42805624 polypeptide=Potri.005G144000.1.p locus=Potri.005G144000 ID=Potri.005G144000.1.v4.1 annot-version=v4.1 ATGGAAGAAATGATGCAGTACTCGCTTCTGGGGGGTTTCTTTCTTCTTCTTGCTGTTACCCTGCTGCAAAAAGCAAGAAAGCACCGCATGAAGCTCCCTC CAAGCCCACCAGGTCGCCTAATTTTAGGCCATCTTCCTCTCCTCAAACAGCCCAAGGCCATCCACCGAACTCTCCACGACATCTCACAAAAATATGGCCC AATTGTCACCCTTAAGTTTGGGTTCCGAACTGTGATCATCGTATCATCACCAGCTGCCGTAGAAGAATGTTTCACCAAGAACGATATTACCTTGGCCAAC CGCCCCCCCTTTCTAAATGGCAAGGTCCTGAATTACAACTTTACCACCCTTGCCGCAGCTCCATATGGTGATCATTGGCGCAACCTTCGCCGGCTTACTG CTATTGAAGTCTTCTCAGCAAGCCGCCTCAACACGTTCGCAAGCATCCGAAGAGAAGAAGTAAAGAATTTACTTCGTAAAATTCATAAACTTTGTGGTGA TGGTTCGGCCGTGATAGAGCTGAGGACAATGTTGTTGGACCTTAACTTTAATGTAATGATGAGAATGGTTGCAGGGAAGAAGTATTATGGCGAAGATGTT GACGGGCTTGAAGAGTCAAAGAGGTTTAAGGACATGATGCACGAGTTTTCTGAATGTACTAGGGTGACAAATCTGGGGGATTTGTTTCCCATTTTGCAGT GCATTGATTATGATGGATTTAAGAACAGGATGACTCAGCTAGGTAAGAGGATGGACGCTTTCTGGCAAGGACTTATTGATGAGCATAGAGTTGATAAGAC TAGGAATACCATGGTAAGCCATCTGCTCGCTTTGCAGGAATCGGAACCTGAATACTATACCGACGAAATCATCAAAGGCATTATTCTGATGATGTTGGTT GCAGGGACAAAAACCTCTGCTTTGTCTTTAGAATGGGCATTTTCCAACCTGCTGAATAATCCACATGCATTAAAGAAAGCAGTAGACGAAGTGGACACCC AAGTTGGAGAAGGCCGTTTGGCAGATGAACCAGATTTCGCTAATCTACATTACATTCAATGTATCATCCATGAAAACTTGAGACTGTGCCCACCAGCTCC GCTCTTGGTTCCACATGTGGCATCCGAGCGCTGCACCCTTGGAGGCTATGATATTCCATCAGGTGCCATGGTACTTGTAAATGCATGGTCCATTCATAGA AATCCAAACGTGTGGGATGATCCTTTAAGTTTTAAGCCTGAAAGATTTGAAAATGGGAAAGGTGAACCATACAGGCTACTGCCATTTGGGCTGGGAAGGA GAGGTTGTCCTGGAGAAGCTATGGCATTCAGAGTGATAAACTTGGTTATGAGCCAATTGCTTCAATGTTTTGAGTTCTCCACTGTTGATGGAAAGGAAGT CGATATGACAGAAACGGCTGCAACACTCATGTTGAAGATTACCCCTTTGCATCTCGTGTGTAAAGCTCGCCCAAACACTCACAACCTCCTCGCTTAA
AA sequence Show only first row Show all	>Potri.005G144000.1 pacid=42805624 polypeptide=Potri.005G144000.1.p locus=Potri.005G144000 ID=Potri.005G144000.1.v4.1 annot-version=v4.1 MEEMMQYSLLGGFFLLLAVTLLQKARKHRMKLPPSPPGRLILGHLPLLKQPKAIHRTLHDISQKYGPIVTLKFGFRTVIIVSSPAAVEECFTKNDITLAN RPPFLNGKVLNYNFTTLAAAPYGDHWRNLRRLTAIEVFSASRLNTFASIRREEVKNLLRKIHKLCGDGSAVIELRTMLLDLNFNVMMRMVAGKKYYGEDV DGLEESKRFKDMMHEFSECTRVTNLGDLFPILQCIDYDGFKNRMTQLGKRMDAFWQGLIDEHRVDKTRNTMVSHLLALQESEPEYYTDEIIKGIILMMLV AGTKTSALSLEWAFSNLLNNPHALKKAVDEVDTQVGEGRLADEPDFANLHYIQCIIHENLRLCPPAPLLVPHVASERCTLGGYDIPSGAMVLVNAWSIHR NPNVWDDPLSFKPERFENGKGEPYRLLPFGLGRRGCPGEAMAFRVINLVMSQLLQCFEFSTVDGKEVDMTETAATLMLKITPLHLVCKARPNTHNLLA

---

DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

---

Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT5G36220		CYP91A1, CYP81D...	CYTOCHROME P450 91A1, cytochro...		Potri.005G144000 [exp]	0	1	IFS1.49
AT5G06839	bZIP	TGA10, bZIP65	TGACG \(TGA\) motif-binding pr...		Potri.006G058800 [exp]	3.16	0.9420
AT2G03220		ATFUT1, ATFT1, ...	MURUS 2, ARABIDOPSIS THALIANA ...		Potri.001G034100 [exp]	4.00	0.9301
AT4G30230			unknown protein		Potri.010G218300 [exp]	4.47	0.9150
AT3G14280			unknown protein		Potri.003G072400 [exp]	6.63	0.9207
AT1G68450		PDE337	PIGMENT DEFECTIVE 337, VQ moti...		Potri.010G123700 [exp]	7.00	0.9251
AT5G02070			Protein kinase family protein ...		Potri.008G059900 [exp]	7.21	0.9106
AT4G27290			S-locus lectin protein kinase ...		Potri.011G125401 [exp]	8.71	0.9351
AT5G16990			Zinc-binding dehydrogenase fam...		Potri.006G070000 [exp]	9.79	0.9094
AT1G61560		ATMLO6, MLO6	MILDEW RESISTANCE LOCUS O 6, S...		Potri.010G220500 [exp]	10.00	0.9209
AT3G62150		ABCB21, PGP21	ATP-binding cassette B21, P-gl...		Potri.002G187400 [exp]	10.39	0.9160

Compare expression of checked genes

Potri.005G144000 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.