Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol	CESA2.6
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G21770 1665 / 0 CESA09, CESA9 cellulose synthase A9 (.1) AT5G64740 1664 / 0 PRC1, IXR2, E112, CESA6 PROCUSTE 1, ISOXABEN RESISTANT 2, cellulose synthase 6 (.1) AT4G39350 1660 / 0 ATH-A, CESA2, ATCESA2 cellulose synthase A2 (.1) AT5G09870 1647 / 0 CESA5 cellulose synthase 5 (.1) AT5G17420 1353 / 0 ATCESA7, MUR10, IRX3 MURUS 10, IRREGULAR XYLEM 3, CELLULOSE SYNTHASE CATALYTIC SUBUNIT 7, Cellulose synthase family protein (.1) AT4G32410 1350 / 0 AtCESA1, RSW1, CESA1 RADIALLY SWOLLEN 1, cellulose synthase 1 (.1) AT5G05170 1335 / 0 IXR1, CEV1, ATH-B, ATCESA3, CESA3 ISOXABEN RESISTANT 1, CONSTITUTIVE EXPRESSION OF VSP 1, CELLULOSE SYNTHASE 3, Cellulose synthase family protein (.1) AT2G25540 1301 / 0 CESA10 cellulose synthase 10 (.1) AT4G18780 1177 / 0 LEW2, IRX1, ATCESA8, CESA8 LEAF WILTING 2, IRREGULAR XYLEM 1, CELLULOSE SYNTHASE 8, cellulose synthase family protein (.1) AT3G03050 776 / 0 RHD7, ATCSLD3, KJK, CSLD3 ROOT HAIR DEFECTIVE 7, KOJAK, CELLULOSE SYNTHASE LIKE D3, cellulose synthase-like D3 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.002G066600 [exp] 1943 / 0 AT4G39350 1655 / 0.0 cellulose synthase A2 (.1) Potri.007G076500 [exp] 1781 / 0 AT5G64740 1790 / 0.0 PROCUSTE 1, ISOXABEN RESISTANT 2, cellulose synthase 6 (.1) Potri.005G087500 [exp] 1754 / 0 AT5G64740 1785 / 0.0 PROCUSTE 1, ISOXABEN RESISTANT 2, cellulose synthase 6 (.1) Potri.005G027600 [exp] 1530 / 0 AT5G64740 1506 / 0.0 PROCUSTE 1, ISOXABEN RESISTANT 2, cellulose synthase 6 (.1) Potri.013G019800 [exp] 1526 / 0 AT5G64740 1512 / 0.0 PROCUSTE 1, ISOXABEN RESISTANT 2, cellulose synthase 6 (.1) Potri.006G181900 [exp] 1394 / 0 AT5G17420 1730 / 0.0 MURUS 10, IRREGULAR XYLEM 3, CELLULOSE SYNTHASE CATALYTIC SUBUNIT 7, Cellulose synthase family protein (.1) Potri.018G103900 [exp] 1391 / 0 AT5G17420 1730 / 0.0 MURUS 10, IRREGULAR XYLEM 3, CELLULOSE SYNTHASE CATALYTIC SUBUNIT 7, Cellulose synthase family protein (.1) Potri.018G029400 [exp] 1379 / 0 AT4G32410 1898 / 0.0 RADIALLY SWOLLEN 1, cellulose synthase 1 (.1) Potri.006G251900 [exp] 1374 / 0 AT4G32410 1899 / 0.0 RADIALLY SWOLLEN 1, cellulose synthase 1 (.1)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10041063 [exp] 1716 / 0 AT5G64740 1868 / 0.0 PROCUSTE 1, ISOXABEN RESISTANT 2, cellulose synthase 6 (.1) Lus10003526 [exp] 1708 / 0 AT5G64740 1863 / 0.0 PROCUSTE 1, ISOXABEN RESISTANT 2, cellulose synthase 6 (.1) Lus10002939 [exp] 1707 / 0 AT5G64740 1870 / 0.0 PROCUSTE 1, ISOXABEN RESISTANT 2, cellulose synthase 6 (.1) Lus10028597 [exp] 1355 / 0 AT4G32410 1922 / 0.0 RADIALLY SWOLLEN 1, cellulose synthase 1 (.1) Lus10018902 [exp] 1348 / 0 AT4G32410 1915 / 0.0 RADIALLY SWOLLEN 1, cellulose synthase 1 (.1) Lus10007538 [exp] 1334 / 0 AT5G05170 1772 / 0.0 ISOXABEN RESISTANT 1, CONSTITUTIVE EXPRESSION OF VSP 1, CELLULOSE SYNTHASE 3, Cellulose synthase family protein (.1) Lus10012198 [exp] 1332 / 0 AT5G05170 1774 / 0.0 ISOXABEN RESISTANT 1, CONSTITUTIVE EXPRESSION OF VSP 1, CELLULOSE SYNTHASE 3, Cellulose synthase family protein (.1) Lus10039607 [exp] 1325 / 0 AT5G05170 1820 / 0.0 ISOXABEN RESISTANT 1, CONSTITUTIVE EXPRESSION OF VSP 1, CELLULOSE SYNTHASE 3, Cellulose synthase family protein (.1) Lus10022449 [exp] 1200 / 0 AT4G18780 1286 / 0.0 LEAF WILTING 2, IRREGULAR XYLEM 1, CELLULOSE SYNTHASE 8, cellulose synthase family protein (.1) Lus10007296 [exp] 1181 / 0 AT4G18780 1671 / 0.0 LEAF WILTING 2, IRREGULAR XYLEM 1, CELLULOSE SYNTHASE 8, cellulose synthase family protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0110 [poplar] [flax] GT-A PF13632 [poplar] [flax] Glyco_trans_2_3 Glycosyl transferase family group 2 CL0229 [poplar] [flax] RING PF14569 [poplar] [flax] zf-UDP Zinc-binding RING-finger
Representative CDS sequence Show only first row Show all	>Potri.005G194200.1 pacid=42805295 polypeptide=Potri.005G194200.1.p locus=Potri.005G194200 ID=Potri.005G194200.1.v4.1 annot-version=v4.1 ATGGAGACCAAAGGGAGACTCATTGCTGGTTCTCACAATAGAAACGAGTTTGTTCTTATCAATGCGGATGAAATAGCAAGAGTCACATCTGTTAAAGAAT TAAGCGGGCAGATTTGCAAGATCTGCGGGGATGAGATAGAGATTACAGTAGATGGGGAGCCATTTGTTGCTTGCAATGAATGTGCATTCCCTGTGTGTAG ACCTTGCTATGAGTATGAAAGAAGAGAGGGCAATCAAGCCTGCCCTCAATGCCGAACCAGATACAAGCGTATCAAAGGGAGTCCTAGAGTTGACGGGGAT GAGGAAGAGGAGGATACGGATGATTTGGAGAATGAATTTGACATAGGAATCAATGACAGGAGAGACCCTCACCAGGTCGCTGAAGCCTTGCTAGCTGCTC GCCTCAACACTGGCCGTGGTTCCCAATCCAATGTTTCTGGGTTTGCCACACCATCTGAGTTCGACTCTGCTTCCGTTGTTCCTGAAATTCCTCTCCTGAC ATATGGTGAAGAGGATGTTGGAATCTCTTCTGATAAGCATGCCCTTATTATACCCCCATTTCGTGGAAAACGAATTCACCCAATGCCATTTCCGGATTCT TCCATGTCCTTGCCACCAAGGCCTATGGATCCTAATAAAGACTTGGCAGTGTATGGGTATGGAACGGTTGCATGGAAGGAAAGAATGGAGGAGTGGAGGA AAAAGCAGAGCGATAAACTTCAGGTGGTCAAGCACCAAGGAGGAAAGGGTGGTGAAAACAATGGTGGAGATGAATTGGATGATCCTGATTTGCCTATGAT GGATGAAGGAAGGCAGCCTCTTTCAAGGAAACTACCAATTTCTTCAAGCAAGATTAGCCCATACAGATTGATCATTATACTCAGGCTTGTGATTCTCAGC CTCTTTTTTCACTATAGAATTCTTCATCCAGTCAACGATGCCTATGGATTGTGGCTTACATCAGTAATTTGTGAAATATGGTTTGCCATATCATGGATAT TAGATCAGTTTCCAAAATGGTTCCCAATTGAGCGAGAAACATATCTTGATAGATTATCATTGAGGTATGAGAAAGAGGGGAAGCCATCTGAGTTAGCGAG TGTTGACGTATTTGTTAGTACTGTTGATCCTATGAAAGAACCTCCACTTATCACTGCAAACACAGTCTTGTCCATCCTTGCTGTAGATTATCCAGTCGAA AAAGTTGCGTGCTATGTTTCAGATGATGGTGCAGCCATGCTTACTTTCGAAGCTATCTCTGAGACATCCGAATTTGCAAGAAAGTGGGTCCCTTTCTGCA AGAGGTTCAGCATTGAGCCTCGGGCTCCAGAATGGTATTTTGCTAAGAAGGTTGACTATTTGAAAGACAAAGTAGATCCAGCATTTATCAGAGAGCGTCG TGCCATGAAGAGAGAATATGAAGAGTTCAAAGTTCGAATAAATGGATTAGTTGCTATGGCGCAGAAGGTTCCTGAGGATGGTTGGACAATGCAGGATGGC TCTCCATGGCCGGGGAATAATGTCAGAGATCATCCAGGAATGATTCAGGTTTTCCTTGGTCATAATGGAGTTCATGATGTTGAAGGAAATGAATTGCCCC GTCTAGTTTATGTGTCTCGTGAGAAGAGACCAGGATTTGATCACCACAAAAAAGCTGGGGCTATGAATGCTTTGGTGAGGGTCTCTGCAATCATATCAAA TGCTCCTTACATGCTGAATGTTGATTGTGATCACTATATAAACAATAGTAAGGCACTTCGCGAAGCCATGTGCTTCATGATGGACCCAACATCTGGAAAG AAAATTTGTTATGTTCAATTTCCACAAAGATTTGATGGGATTGATCGTCATGATAGATACTCAAATCGTAATGTTGTATTCTTTGATATCAATATGAAAG GATTGGATGGCATACAAGGTCCTATATATGTTGGTACTGGATGCGTTTTTAGGAGGCAAGCACTTTATGGATATGATGCCCCTGTCAAGAAGAAGCCCCC AGGGAGGACATGCAATTGCTTGCCAAGATGGTGCTGCTACTGTTGCCGATCTAAAAAGAAGAATAAGAAATCAAAATCAAAATCAAATGAAAAAAAGAAG AGCAAGGAGGCTTCTAAGCAGATACATGCATTAGAAAATATTGAGGAGGGTATTGAAGGGATAGATAATGAAAAATCAGCCTTGATGCCTCAGATAAAAT TTGAGAAAAAATTTGGACAGTCGTCAGTTTTCATAGCCGCTACACTTATGGAAGATGGTGGAGTTCCTAAAGGAGCAAGTTCTGCATCACTTTTGAAAGA AGCCATTCATGTCATTAGTTGTGGTTATGAAGATAAAACTGAATGGGGAAAAGAGATTGGGTGGATTTATGGCTCTGTTACTGAGGATATATTAACTGGC TTCAAGATGCATTGCCATGGCTGGCGATCAGTGTATTGCACGCCAAAAATACCTGCATTTAAAGGTTCAGCTCCAATAAACCTTTCAGATCGTCTACACC AGGTGCTCCGATGGGCACTGGGATCTGTTGAGATTTTATTGAGTAGACACTGTCCAATATGGTATGGATATGGATGTGGATTGAAATGGTTGGAACGCTT CTCTTATATAAACTCTGTTGTCTATCCATTGACATCGATCCCCTTGATTGCCTACTGTACCTTACCTGCTGTCTGTCTACTGACTGGGAAATTCATTGTT CCTGAGATTAGTAACTATGCCAGTATCATTTTCATGGCTCTCTTCATATCCATAGCTGCAACTGGTATCCTCGAAATGCAGTGGGGAGGTGTTGGCATCC ATGACTGGTGGAGAAATGAGCAGTTCTGGGTCATTGGTGGTGCATCATCTCATCTATTTGCTCTTTTCCAGGGTCTTCTTAAGGTATTGGCTGGAGTTAA CACCAATTTCACTGTTACCTCCAAAGCGGCTGATGATGGAGAATTTTCAGAGCTCTACCTATTTAAATGGACATCTCTGTTGATCCCTCCTATGACTTTG CTTATCATAAACATAATTGGAGTCGTAGTTGGAATTTCTGATGCCATCAATAATGGTTACGAGACTTGGGGTCCACTCTTTGGTAAGCTATTCTTTGCAT TGTGGGTAATTGTCCACCTTTACCCGTTCCTCAAGGGGTTGATAGGGAAACAAGACAGGCTTCCCACCATTATTGTTGTATGGTCGATCCTTCTAGCTTC TGTTTTAACACTCTTATGGGTTCGAATCAACCCATTTTTGTCGAAAGGTGGCATTGTCTTGGAAATTTGTGGGTTGAATTGTGATTAA
AA sequence Show only first row Show all	>Potri.005G194200.1 pacid=42805295 polypeptide=Potri.005G194200.1.p locus=Potri.005G194200 ID=Potri.005G194200.1.v4.1 annot-version=v4.1 METKGRLIAGSHNRNEFVLINADEIARVTSVKELSGQICKICGDEIEITVDGEPFVACNECAFPVCRPCYEYERREGNQACPQCRTRYKRIKGSPRVDGD EEEEDTDDLENEFDIGINDRRDPHQVAEALLAARLNTGRGSQSNVSGFATPSEFDSASVVPEIPLLTYGEEDVGISSDKHALIIPPFRGKRIHPMPFPDS SMSLPPRPMDPNKDLAVYGYGTVAWKERMEEWRKKQSDKLQVVKHQGGKGGENNGGDELDDPDLPMMDEGRQPLSRKLPISSSKISPYRLIIILRLVILS LFFHYRILHPVNDAYGLWLTSVICEIWFAISWILDQFPKWFPIERETYLDRLSLRYEKEGKPSELASVDVFVSTVDPMKEPPLITANTVLSILAVDYPVE KVACYVSDDGAAMLTFEAISETSEFARKWVPFCKRFSIEPRAPEWYFAKKVDYLKDKVDPAFIRERRAMKREYEEFKVRINGLVAMAQKVPEDGWTMQDG SPWPGNNVRDHPGMIQVFLGHNGVHDVEGNELPRLVYVSREKRPGFDHHKKAGAMNALVRVSAIISNAPYMLNVDCDHYINNSKALREAMCFMMDPTSGK KICYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYDAPVKKKPPGRTCNCLPRWCCYCCRSKKKNKKSKSKSNEKKK SKEASKQIHALENIEEGIEGIDNEKSALMPQIKFEKKFGQSSVFIAATLMEDGGVPKGASSASLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTG FKMHCHGWRSVYCTPKIPAFKGSAPINLSDRLHQVLRWALGSVEILLSRHCPIWYGYGCGLKWLERFSYINSVVYPLTSIPLIAYCTLPAVCLLTGKFIV PEISNYASIIFMALFISIAATGILEMQWGGVGIHDWWRNEQFWVIGGASSHLFALFQGLLKVLAGVNTNFTVTSKAADDGEFSELYLFKWTSLLIPPMTL LIINIIGVVVGISDAINNGYETWGPLFGKLFFALWVIVHLYPFLKGLIGKQDRLPTIIVVWSILLASVLTLLWVRINPFLSKGGIVLEICGLNCD

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT5G64740		PRC1, IXR2, E11...	PROCUSTE 1, ISOXABEN RESISTANT...		Potri.005G194200 [exp]	0	1	CESA2.6
AT4G39350		ATH-A, CESA2, A...	cellulose synthase A2 (.1)		Potri.002G066600 [exp]	3.16	0.7096
AT2G30360		PKS5, CIPK11, S...	SNF1-RELATED PROTEIN KINASE 3....		Potri.013G155600 [exp]	12.64	0.6291
AT1G20480			AMP-dependent synthetase and l...		Potri.003G210600 [exp]	14.69	0.6215
AT1G08500		AtENODL18	early nodulin-like protein 18 ...		Potri.001G273000 [exp]	26.15	0.6009
AT1G20480			AMP-dependent synthetase and l...		Potri.003G210701 [exp]	27.74	0.6366
AT3G02875		ILR1	IAA-LEUCINE RESISTANT 1, Pepti...		Potri.016G074100 [exp]	33.67	0.6259
AT5G35750		AHK2	histidine kinase 2 (.1)		Potri.014G164700 [exp]	35.49	0.6498
AT5G65640	bHLH	bHLH093	beta HLH protein 93 (.1.2)		Potri.002G108400 [exp]	47.62	0.5661
AT3G09920		PIP5K9	phosphatidyl inositol monophos...		Potri.006G121200 [exp]	55.85	0.5313
AT4G10380		AtNIP5;1, NIP5;...	NOD26-LIKE MIP 8, NOD26-LIKE M...		Potri.001G455000 [exp]	60.44	0.5850

Compare expression of checked genes

Potri.005G194200 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.