Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol	OEE2.1
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G06680 400 / 2e-142 PSII-P, OEE2, PSBP-1, OE23 OXYGEN-EVOLVING ENHANCER PROTEIN 2, OXYGEN EVOLVING COMPLEX SUBUNIT 23 KDA, photosystem II subunit P-1 (.1.2) AT2G30790 216 / 9e-72 PSBP-2 photosystem II subunit P-2 (.1) AT3G55330 47 / 5e-06 PPL1 PsbP-like protein 1 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.002G055700 [exp] 493 / 3e-179 AT1G06680 382 / 3e-135 OXYGEN-EVOLVING ENHANCER PROTEIN 2, OXYGEN EVOLVING COMPLEX SUBUNIT 23 KDA, photosystem II subunit P-1 (.1.2) Potri.010G210200 [exp] 46 / 1e-05 AT3G55330 299 / 2e-103 PsbP-like protein 1 (.1)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10020717 [exp] 382 / 3e-135 AT1G06680 380 / 2e-134 OXYGEN-EVOLVING ENHANCER PROTEIN 2, OXYGEN EVOLVING COMPLEX SUBUNIT 23 KDA, photosystem II subunit P-1 (.1.2) Lus10029823 [exp] 375 / 1e-132 AT1G06680 375 / 2e-132 OXYGEN-EVOLVING ENHANCER PROTEIN 2, OXYGEN EVOLVING COMPLEX SUBUNIT 23 KDA, photosystem II subunit P-1 (.1.2) Lus10030326 [exp] 47 / 5e-06 AT3G55330 268 / 7e-91 PsbP-like protein 1 (.1) Lus10003289 [exp] 46 / 1e-05 AT3G55330 267 / 7e-91 PsbP-like protein 1 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0619 [poplar] [flax] Mog1p_PsbP PF01789 [poplar] [flax] PsbP PsbP
Representative CDS sequence Show only first row Show all	>Potri.005G206700.2 pacid=42805525 polypeptide=Potri.005G206700.2.p locus=Potri.005G206700 ID=Potri.005G206700.2.v4.1 annot-version=v4.1 ATGGCCTCCACTTCATGCTTCTTGCACCACCATGCACTAACCACTCCTGCTAGATCAACCCCATCATCACAACGCCAAGTGGCTAACCTCAAGCCCACCC AGCTGGCTTGCAGAGCCCAAAAGCAGGCAGTACAGGAGGAGGATAATGGTGCTGTGTCTCGCAGATTGGCTCTCACAGTGCTCATTGGTGCTGCTGCCCT TGGCTCCAAGGTAGCTCCTGCTGATGCTGCCTATGGTGAATCTGCCAATATTTTCGGGAAGCCAAAGACAGACACAGATTTCTTGCCCTACAATGGAGAT GGATTCAAGTTGTCAGTTCCATCAAAATGGAATCCAAGCAAGGAGAGAGAGTTCCCTGGTCAGGTTCTTAGATACGAGGACAACTTCGATGCCACCAGCA ACGTTTCTGTCATGGTCATCCCAACCGATAAGAAATCCATCACCGACTACGGTTCCCCTGAGGAATTCCTCTCCAAGGTGGATTTCTTGCTTGGAAAACA ATCCTCCTTGTTTGCAACCGCATCTGAGGGTGGTTTCGACCCCAATACCGTGGCAACAGCTAACATATTGGAGACATCAACTCCAGTGGTTGGTGGGAAG CAATATTTCTTCTTGTCAGTACTGACAAGGACTGCTGATGGAGATGAAGGTGGCAAGCACCAACTGATCACAGCCACTGTGAAAGATGGCAAGCTTTACA TTTGCAAGGCACAAGCTGGAGACAAGAGGTGGTTCAAGGGAGCAAGAAAGTTCGTGGAGAGCACTGCAAGTTCTTTCAGTGTTGCTTAA
AA sequence Show only first row Show all	>Potri.005G206700.2 pacid=42805525 polypeptide=Potri.005G206700.2.p locus=Potri.005G206700 ID=Potri.005G206700.2.v4.1 annot-version=v4.1 MASTSCFLHHHALTTPARSTPSSQRQVANLKPTQLACRAQKQAVQEEDNGAVSRRLALTVLIGAAALGSKVAPADAAYGESANIFGKPKTDTDFLPYNGD GFKLSVPSKWNPSKEREFPGQVLRYEDNFDATSNVSVMVIPTDKKSITDYGSPEEFLSKVDFLLGKQSSLFATASEGGFDPNTVATANILETSTPVVGGK QYFFLSVLTRTADGDEGGKHQLITATVKDGKLYICKAQAGDKRWFKGARKFVESTASSFSVA

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT1G06680		PSII-P, OEE2, P...	OXYGEN-EVOLVING ENHANCER PROTE...		Potri.005G206700 [exp]	0	1	OEE2.1
AT3G63540			Mog1/PsbP/DUF1795-like photosy...		Potri.009G062500 [exp]	1.00	0.9832
AT1G03600		PSB27	photosystem II family protein ...		Potri.005G206200 [exp]	2.23	0.9779
AT1G55670		PSAG	photosystem I subunit G (.1)		Potri.011G168700 [exp]	2.82	0.9822	Pt-PSAG.2
AT4G16410			unknown protein		Potri.006G017500 [exp]	3.87	0.9801
AT3G08940		LHCB4.2	light harvesting complex photo...		Potri.006G099500 [exp]	4.00	0.9801	LHCB4.3,Lhcb4
AT3G08940		LHCB4.2	light harvesting complex photo...		Potri.016G115200 [exp]	6.92	0.9717	Pt-LHCB4.2
AT1G51400			Photosystem II 5 kD protein (....		Potri.001G256900 [exp]	10.58	0.9644
AT5G22460			alpha/beta-Hydrolases superfam...		Potri.009G164900 [exp]	10.58	0.9548
AT5G58250		EMB3143	EMBRYO DEFECTIVE 3143, unknown...		Potri.013G161000 [exp]	10.90	0.9640
AT3G54890		LHCA1	photosystem I light harvesting...		Potri.010G221100 [exp]	10.95	0.9703	1

Compare expression of checked genes

Potri.005G206700 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.