Potri.005G213400 [POPLAR]


External link
JGI Phytozome v13PopgenieAspWood                  
Symbol
Arabidopsis homologues
Locus ID BLAST score/e-value TF class Alias TAIR10 short description
AT1G03080 1400 / 0 kinase interacting (KIP1-like) family protein (.1)
AT4G14760 946 / 0 kinase interacting (KIP1-like) family protein (.1)
AT3G22790 907 / 0 Kinase interacting (KIP1-like) family protein (.1)
AT4G02710 573 / 6e-180 Kinase interacting (KIP1-like) family protein (.1)
AT5G10500 153 / 2e-37 Kinase interacting (KIP1-like) family protein (.1)
AT2G22560 153 / 3e-37 Kinase interacting (KIP1-like) family protein (.1)
AT2G30500 145 / 5e-36 Kinase interacting (KIP1-like) family protein (.1), Kinase interacting (KIP1-like) family protein (.2)
AT1G09720 140 / 3e-33 Kinase interacting (KIP1-like) family protein (.1)
AT5G58320 132 / 1e-31 Kinase interacting (KIP1-like) family protein (.1), Kinase interacting (KIP1-like) family protein (.2), Kinase interacting (KIP1-like) family protein (.3)
AT1G58210 118 / 2e-26 EMB1674 EMBRYO DEFECTIVE 1674, kinase interacting family protein (.1)
Paralogs
Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description
Potri.002G049600 2840 / 0 AT1G03080 1229 / 0.0 kinase interacting (KIP1-like) family protein (.1)
Potri.010G083300 1248 / 0 AT3G22790 1306 / 0.0 Kinase interacting (KIP1-like) family protein (.1)
Potri.008G156200 715 / 0 AT3G22790 762 / 0.0 Kinase interacting (KIP1-like) family protein (.1)
Potri.008G156250 537 / 9e-174 AT3G22790 519 / 7e-168 Kinase interacting (KIP1-like) family protein (.1)
Potri.007G011300 153 / 3e-37 AT2G22560 851 / 0.0 Kinase interacting (KIP1-like) family protein (.1)
Potri.005G147300 153 / 3e-37 AT2G22560 421 / 2e-131 Kinase interacting (KIP1-like) family protein (.1)
Potri.013G158100 146 / 6e-36 AT2G30500 384 / 7e-127 Kinase interacting (KIP1-like) family protein (.1), Kinase interacting (KIP1-like) family protein (.2)
Potri.019G131000 143 / 6e-35 AT2G30500 389 / 4e-129 Kinase interacting (KIP1-like) family protein (.1), Kinase interacting (KIP1-like) family protein (.2)
Potri.002G106400 145 / 8e-35 AT1G58210 702 / 0.0 EMBRYO DEFECTIVE 1674, kinase interacting family protein (.1)
Flax homologues
Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description
Lus10022079 1649 / 0 AT1G03080 1179 / 0.0 kinase interacting (KIP1-like) family protein (.1)
Lus10039359 1150 / 0 AT3G22790 1402 / 0.0 Kinase interacting (KIP1-like) family protein (.1)
Lus10014687 1139 / 0 AT1G03080 938 / 0.0 kinase interacting (KIP1-like) family protein (.1)
Lus10006896 1095 / 0 AT1G03080 927 / 0.0 kinase interacting (KIP1-like) family protein (.1)
Lus10042627 649 / 0 AT4G02710 624 / 0.0 Kinase interacting (KIP1-like) family protein (.1)
Lus10021908 594 / 0 AT4G14760 710 / 0.0 kinase interacting (KIP1-like) family protein (.1)
Lus10041192 590 / 0 AT4G14760 744 / 0.0 kinase interacting (KIP1-like) family protein (.1)
Lus10006606 227 / 2e-62 AT3G22790 368 / 3e-111 Kinase interacting (KIP1-like) family protein (.1)
Lus10002655 145 / 1e-34 AT2G22560 511 / 9e-164 Kinase interacting (KIP1-like) family protein (.1)
Lus10025717 142 / 9e-34 AT2G22560 497 / 6e-158 Kinase interacting (KIP1-like) family protein (.1)
PFAM info
Clan ID Clan name Pfam ID Pfam name Pfam description
PF07765 KIP1 KIP1-like protein
Representative CDS sequence
>Potri.005G213400.4 pacid=42803688 polypeptide=Potri.005G213400.4.p locus=Potri.005G213400 ID=Potri.005G213400.4.v4.1 annot-version=v4.1
ATGGCTGCCAGGTCGCAAGCAGATTCTAAACGGAAGTATTCATGGTGGTGGAACAGCCACATCAGCCCAAAAAACTCAAAATGGCTTCAAGAGAATCTAA
CAGGTATGGATTTCAAAGTCAAACAAATGATCAAACTCCTTGAAGAAGACGCAGATTCCTTTGCAAGGAGGGCAGAGATGTACTATAAGAAACGCCCGGA
GCTTATGAAATTAGTTGAAGAGTTTTATAGAGCATATCGTGCATTGGCTGAAAGATATGATCATGCCACCGGGGCCCTTCGCCAGGCACATCGAACAATG
GCAGAAGCATTCCCCAACCAAGTCCCCCTTATGCTTGGCGATGATTCTCCTGCAGGTTCTGCTACTGATGGTGATCCCCGTACACCTGATATGCCACCAA
TACGTGCACCTTTTGACCCTGATGAGCTGCAAAAGGATGCTTTGGGTGTTTCACCATCTCATAGGAATGGAGCTTTTACTGAAGAATCAGATTCTGTTCC
TGGAAGAAAGGGTTTGAAACAGCTCAATGATCTTTTTGGGTCTGGAGATGGGGTGAACCATGCTAAATTTTCAGAAGGGAGGGCAAGAAAAGGCCTCAGT
TTCCATGATCCAGAGGAGAAAGAGCAAGGTGTGTGGAATGACAGTAGCCATGATCTCAAGGCTCGAATCCCATCCCAGTCTGAACGAGTGAGTCAAGCCG
AGCTAGAAATTTTAACTTTAAAGAATGCGCTTGCTAAACTAGAAGCTGAAAAAGAAGCTGACCTGCTTCGGTATGAGAATAGTTTGGAAAGATTGTCTAA
TCTGGAGTCAGAAGTCTCTCGTGCAACAGAGGATTCCAGGGGACTTAATGAACGAGCCAGCAAATCTGAAGCTGAAGTTCTAACTTTGAAGGAAGCCCTT
GCCGAGTTAGAGGCTGAAAAGAAATCTAGTTTTCTTCAATACCAGCATTGTTTGGAAAAAATATCTAATCTGGAGAACAGTATATCTCATGTCCAAAAGG
ATGCAGGAGAACAAAATGAGCGAGCTGGCAAGGCCGAAATTGAAGCTCAATCTCTAAAGCAAGACCTGGCTAGATTAGAAGCTGAAAAAAATGTTGTGCT
GGTTCAGTACAAACAATGTTTGGAGAAGATATCTGATCTAGAAGACCAATTACTGAATGCACAGGAAGATGCCAGGAGGTTCAGTGAGCGTGCGGGTGAT
GCTGAAAGGGAAATTGATACCTTGAAGCAAGCTTTGACCAAGCTAACTGAAGAGAAGGAAGCTGCTGTCACTCAGTACCAGCAGTGCTTGGCAACAATTG
TCAGCCTGGAGCATAAAATTACTTGTTTTGAGGAGGAAGCCCGAAGGCTTAACTCAGAGATAGATGATGGGGCTGTGAAGCTAAAGGATGCTGAAGAGAG
GTGTATTCTGTTGGTAAAATCAAATCAAACCATGCAGTCTGAGTTAGAGTCATTGGTGCAGAAAGTGGCAGCTCAAAGCGAAGAAGTTACGGAGAAGAAG
GAGGAGTTGGGGAGACTTTGGACTTGTGTACAAGAAGAGCGATTGAGATTCATTGAGGCTGAAACTGCTTTTCAAACTCTACAGCATCTGCACTCTCAAT
CTCAGGAAGAACTGAGATCTATGGCGGCTCAGCTTCAGAACAGGTCTCAAATTTTGGACGAACTGGAAGCCCGTAATCAGAGTTTAAAAGATGAAGTGGA
GCATGTCAAGGTGGAGAACAAGAGTGTAAGTGAAGTCAACTTATCCTCAGCTCTGACTATACAGAATCTGCAAGATGAGATTTCAAGCTTAAGGGAGACC
ATAACAAAACTTGAAGCAGAGGTTGAGCTTCGAGTGGACCAAAGAAATGCTCTTCAGCAAGAAATTTACTGTCTGAAGGAGGAGTTAAATGACCTTAACC
GGAAGCATCAGGCAATCATGGGGCAGGTGGAATCAGTTGGTTTCAGCCCAGAGTCCTTTGGGTTGTCTGTGAAGGATTTGCAAGATGCCAACATAAAGCT
AAAGGAGGTTTGTGAGCAAGACAGAAGTGAAAACGTAGCTCTTTTGGAAAAGTTGGAGATCATGGACAAACTTATTGAAAAAAATGCTCTCCTGGAGAAT
TCTTTATCAGATTTGAATGTTGAGCTAGAAGGGGTTAGAGAGAAGGTAAAGGAACTGGAAGAATCCTGTCAATCTCTTTTGGGAGAGAAATCCATTCTTG
TTTCTGAGAAGGCTTTGCTGGCCTCTGAGTTGCAATTTGTGACTGATAATTTGGAGAAACTTACAGAGAAGAACAGCGTTCTGGAGAATTTCCTCATTGC
TGCCAATGCTGAACTTGAGGGGCTGAGAGTAAAATCAAAGAGCTTAGAAGATTTATGCCTGCTGCATGAGAATGAGAAGTCTGACCTGGCCTCTATGAAA
GGAAGTTTAACTTCTCAGTTGGACATCACTGAGAAAAGCCTGAAGGATTTGGAGAAAAATTATAAAGAATTAGAAGAGAGATATTCCCTTCTGGAGAAAG
AGAGAGAATCCACACTTCATGAAGTAGAAGAATTACAGGTTTCTTTAGATGCCAAAAAGCAAGAACATGCTAATCTAGCCAAGTTGAGTGAGTCCCAATT
GGCTGGTATGGCATCACAGATCTGCTTTCTACAAGAAGAAGGTCAGTGCAGAAAGAAAGAATATGAAGAGGAGCTGGACAAAGCTGTGAATGCGGAGATT
GAGATCTTTATCTTGCAGAAAAGTGCACAAGAACTGGAAGAAAAGAATTTTTCCCTCTTGCTTGAGCATCAGAAGCTCCTGGAGGCATCTAAACTTTCAG
AGGAACAGATCTCTGATCTGAAACATGAAAATTGTGAACAACAAGTAGAGTTGAAATGCATCTCTGATCAAATTAACAATCTGAGAGTGGGACTTTATCA
GGTGTTGAAGGCTCTTGAACTTGATGCAAACCAGTGTGAAAATAAAACGGAGCAAGACCAAAAACTTGTGAACCATGTACTCAACAAACTTCAAGAAACA
CAAGAGTTTCTCTTCAAGATGCAAGATGAAAATCAACAGTTGGTCATCGAGAACTCTGTTCTAGTTACACTGCTTGGGCAACTTCAACTAGAGGTGGAAA
ATCTTGTGATGACTAAAAATATCCTTGATCAGGAGTTGACAACCAGGTCTGAGCAGTTCTTGGTTTTGAAGAATGAGAGCCAAAAGCTTTCAGGGATAAA
TGAAGTGATGAAATTGAAGTTAATAGAGGGAGACCACAAAGAGGAGGCTTTGAAGGTTGAACTAAGCAATCTTCACGGGCAGCTGTCAGACTTGCAAGGT
GCTCACCAGAACCTACAGGAATTGAACTGCAAGGTTCTTGATGAGCAGAGGTCCTTGATGAAATCATTTTCTGACGTGCTGATGGAGAAATGTAAACTAG
AAGAGGAAAACTGCTGCATTCTTTATGAAACTGTATCTCAAAGTACCCTTTCTCTAATTTTCAGGGATATCATCTGCGAAAAATCTGTGGAAACAAAAGG
CCTTGGTGAAAATCTAGATAAACTGTATCATGACAACAATGGTCTCAATGAGAAGGTGAAGATATTGGAGAAGGAGTTAGATAAGCTCTGTTCCTTAGAG
GATGAGAAGAGAGAGTTGTGTGAAATGGTGGAGGATCTTAAGTGCAAGTATGATGAGGTCGGGATGATACAATCAGATCAAGAAATGCAGATCATCAAAC
TATCTGGAGATTATGATCAGAAAAGTAAGGAGGCTGAAAAGTTTTGTGAAGTAAATCAGAAATTGGAGTCTGAAATGAGGAAATTGCATGAAGAATTTCA
AGAAGTTAAAGGCAGGGAGGAAAATTTGAGTAATGAACTGGTAAAGGGAAGAAATGAGATTGAATTACTAGAGTCTCAGGCTGTTGCATTGTTCGGTGAA
CTACAGATATCTGCTGTGCGAGAAGCCTTGTTTGAAGGAAAGATTCATGAGCTCCTTGAATTATGTGAGAGACTTGAAGATGGAAATTGCTCAAAAGACG
TGGAGATCAACCAGCTGAAAGAAAGAGTTGGTACTTTGGAAGGCGGAAATGCAGACCTCAAAGCTCTGATGGCTGCATATTTTCCAGCTTTCATGTCTTT
GAGGGATTGTGTAACATCACTGGAGAAGCACACTCTTTCAGATGTGACATTTAATGAAGTTGACAACAAGGAACCAAAGGATGCTGCAATGGTGGTGCAT
GCCAAAAGCTGTCAACAAATGAGTGAAGGACAGAGTAGCGTAGTACCAGGTGGAACTTTGGACTTCCAGGAATTGCAAATGAGGGTTATAGCCATTGAGA
AGGCAGTCATTGAGAAGGAGAGACTTGTTATGGTGGAAAACTTGAGTTCTCATTCCAAACTCGATGCTGCGATGAGGCAGATTGAGGAGTTGAAATCTGG
AAGCAGCTTGCATCTAGCAGGTATTGAAACAAGGAAGTATGCCAAGCCAAATCCGGAGCAAGAGGAACTGAGGGCCGTGCTCCGTGATGATCTCAGGCAG
CAGAAACAAACACGTGAAATCTCCGAGGATGGGAGTGAAGTGATGACAAAAGACATAATGCTTGATCAGATATCTGAATGTTCATCTTATAGAATAAGCA
GAAGAGAAACTATGGAGGCTGATTATCAGATGCTTGAAATATGGGAAACTGCTGACCGGAATGACAGCAATGACCTGACTGTTGGAAAAACTCAGAAGGT
GATTGCTTCACAGGCAGAGAAAAAACACACCAGGCAGCATCCCTCCACAGAATCAATGATTGAGAAGGAGGTGGGTGTGGACAAATTAGAGATCTCAAAG
ACATTATCAGGGTCTCGTCAAGAAGGAAATAAGAGGAAAATTCTAGAAAGACTTGATTCTGATGCTCAAAAGTTGACAAATCTTCAAATAACAGTTCAAG
ATTTGAAGAGTAAGGTGGAGATTACAGAGAAGAGCAAAAAGGGAAAGGGTATTGAATATGATAATGTGAAGGAGCAGCTGGAAGAATCCGAGGAGGCCAT
CATGGAGCTGTTAGAAGTCAATCGCAAATTAATGAAGACTGTTGAAGACGAGCCACTGTACTTTGATGAGAAGTCCACACTAATACCAGATGAGAGTGGC
ACTGTCAGGAGAGTAAAAATTTTAGAACAGGCAAGAAGAGGATCAGAGAACATTGGGCGTTTGCAGTTGGAGGTGCAGAAATTGCAGTTCCTTTTGCTGA
AACTCGATGGCGAAAACAGCAGTAGAGGAAAAACAAAAATCACAGAGCGAAAAACAAGAGTTTTACTGCGGGACTATCTGTATGGTGGAACAAGAACAAG
CCAGAAGCAGAAGAAAGGGCGCTTTTGTTCATGTGTGCAACCTCCAACTAAAGGAGATTGA
AA sequence
>Potri.005G213400.4 pacid=42803688 polypeptide=Potri.005G213400.4.p locus=Potri.005G213400 ID=Potri.005G213400.4.v4.1 annot-version=v4.1
MAARSQADSKRKYSWWWNSHISPKNSKWLQENLTGMDFKVKQMIKLLEEDADSFARRAEMYYKKRPELMKLVEEFYRAYRALAERYDHATGALRQAHRTM
AEAFPNQVPLMLGDDSPAGSATDGDPRTPDMPPIRAPFDPDELQKDALGVSPSHRNGAFTEESDSVPGRKGLKQLNDLFGSGDGVNHAKFSEGRARKGLS
FHDPEEKEQGVWNDSSHDLKARIPSQSERVSQAELEILTLKNALAKLEAEKEADLLRYENSLERLSNLESEVSRATEDSRGLNERASKSEAEVLTLKEAL
AELEAEKKSSFLQYQHCLEKISNLENSISHVQKDAGEQNERAGKAEIEAQSLKQDLARLEAEKNVVLVQYKQCLEKISDLEDQLLNAQEDARRFSERAGD
AEREIDTLKQALTKLTEEKEAAVTQYQQCLATIVSLEHKITCFEEEARRLNSEIDDGAVKLKDAEERCILLVKSNQTMQSELESLVQKVAAQSEEVTEKK
EELGRLWTCVQEERLRFIEAETAFQTLQHLHSQSQEELRSMAAQLQNRSQILDELEARNQSLKDEVEHVKVENKSVSEVNLSSALTIQNLQDEISSLRET
ITKLEAEVELRVDQRNALQQEIYCLKEELNDLNRKHQAIMGQVESVGFSPESFGLSVKDLQDANIKLKEVCEQDRSENVALLEKLEIMDKLIEKNALLEN
SLSDLNVELEGVREKVKELEESCQSLLGEKSILVSEKALLASELQFVTDNLEKLTEKNSVLENFLIAANAELEGLRVKSKSLEDLCLLHENEKSDLASMK
GSLTSQLDITEKSLKDLEKNYKELEERYSLLEKERESTLHEVEELQVSLDAKKQEHANLAKLSESQLAGMASQICFLQEEGQCRKKEYEEELDKAVNAEI
EIFILQKSAQELEEKNFSLLLEHQKLLEASKLSEEQISDLKHENCEQQVELKCISDQINNLRVGLYQVLKALELDANQCENKTEQDQKLVNHVLNKLQET
QEFLFKMQDENQQLVIENSVLVTLLGQLQLEVENLVMTKNILDQELTTRSEQFLVLKNESQKLSGINEVMKLKLIEGDHKEEALKVELSNLHGQLSDLQG
AHQNLQELNCKVLDEQRSLMKSFSDVLMEKCKLEEENCCILYETVSQSTLSLIFRDIICEKSVETKGLGENLDKLYHDNNGLNEKVKILEKELDKLCSLE
DEKRELCEMVEDLKCKYDEVGMIQSDQEMQIIKLSGDYDQKSKEAEKFCEVNQKLESEMRKLHEEFQEVKGREENLSNELVKGRNEIELLESQAVALFGE
LQISAVREALFEGKIHELLELCERLEDGNCSKDVEINQLKERVGTLEGGNADLKALMAAYFPAFMSLRDCVTSLEKHTLSDVTFNEVDNKEPKDAAMVVH
AKSCQQMSEGQSSVVPGGTLDFQELQMRVIAIEKAVIEKERLVMVENLSSHSKLDAAMRQIEELKSGSSLHLAGIETRKYAKPNPEQEELRAVLRDDLRQ
QKQTREISEDGSEVMTKDIMLDQISECSSYRISRRETMEADYQMLEIWETADRNDSNDLTVGKTQKVIASQAEKKHTRQHPSTESMIEKEVGVDKLEISK
TLSGSRQEGNKRKILERLDSDAQKLTNLQITVQDLKSKVEITEKSKKGKGIEYDNVKEQLEESEEAIMELLEVNRKLMKTVEDEPLYFDEKSTLIPDESG
TVRRVKILEQARRGSENIGRLQLEVQKLQFLLLKLDGENSSRGKTKITERKTRVLLRDYLYGGTRTSQKQKKGRFCSCVQPPTKGD

DESeq2's median of ratios [POPLAR]

Mapped by: Order by: Show schematic diagram

Coexpressed genes

Only top 10 genes are shown Show allDownload tab-delimited text
Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.
At best At TF class At alias At description Locus MR r Symbol NWA:WTNWB:WTNWA:OE-ARK2NWB:OE-ARK2NWA:miRNA-ARK2NWB:miRNA-ARK2NW 0hrWT H20WT-NWTUA1dEY NWTUA1dEY+TUB15 NWTUA1dY+TUB9 NWPde NWNWA:WT GANWBWT GATW:WTTW:WT GANWA:OE-ARK2 GANWB:OE-ARK2 GATW:OE-ARK2TW:OE-ARK2 GANWA:miRNA-ARK2 GANWB:miRNA-ARK2 GATW:miRNA-ARK2TW:miRNA-ARK2 GATW 2hrTW 8hrTW 24hrTW 48hrTW 96hrTW 336hrWT ACC35S::etr1-1 H2035S::etr1-1 ACCLMX5::etr1-1 H20LMX5::etr1-1 ACCWT-TWTUA1dEY TWTUA1dEY+TUB15 TWTUA1dY+TUB9 TWPde TWOW:WTOW:WT GAOW:OE-ARK2OW:OE-ARK2 GAOW:miRNA-ARK2OW:miRNA-ARK2 GAOW 2hrOW 8hrOW 24hrOW 48hrOW 96hrOW 336hrRoot CTRRoot LongColdRoot LongDrougtRoot LongHeatRoot LongSaltRoot ShortColdRoot ShortDrougtRoot ShortHeatRoot ShortSaltPtr rootLeaf CTRLeaf LongColdLeaf LongDrougtLeaf LongHeatLeaf LongSaltLeaf ShortColdLeaf ShortDrougtLeaf ShortHeatLeaf ShortSaltPtr leafStem CTRStem LongColdStem LongDrougtStem LongHeatStem LongSaltStem ShortColdStem ShortDrougtStem ShortHeatStem ShortSaltPtr shootPtr xylemPtr phloemPtr fiberPtr vesselPtr fiber vessel ray
AT1G03080 kinase interacting (KIP1-like)... Potri.005G213400 0 1
AT2G44730 Trihelix Alcohol dehydrogenase transcri... Potri.003G083800 2.23 0.7690
AT2G25430 epsin N-terminal homology (ENT... Potri.006G255000 2.44 0.7580
AT1G13980 VAN7, EMB30, GN VASCULAR NETWORK 7, GNOM, EMBR... Potri.017G078800 13.41 0.6911 GN.2
AT5G18610 Protein kinase superfamily pro... Potri.008G205700 13.74 0.6981
AT4G12780 Chaperone DnaJ-domain superfam... Potri.014G197600 13.78 0.7081
AT3G51770 ATEOL1, ETO1 ARABIDOPSIS ETHYLENE OVERPRODU... Potri.006G103400 15.36 0.7138
AT3G52115 AtCOM1, ATGR1 gamma response gene 1 (.1) Potri.001G269700 15.71 0.6514 Pt-GR1.2
AT3G15470 Transducin/WD40 repeat-like su... Potri.001G403400 17.66 0.7063
AT1G72160 Sec14p-like phosphatidylinosit... Potri.019G079300 18.00 0.6393
AT4G00800 SETH5 transducin family protein / WD... Potri.014G105601 20.59 0.6984

Potri.005G213400 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.