Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G03060 5156 / 0 SPI SPIRRIG, Beige/BEACH domain ;WD domain, G-beta repeat protein (.1) AT4G02660 4611 / 0 Beige/BEACH domain ;WD domain, G-beta repeat protein (.1) AT2G45540 387 / 3e-107 WD-40 repeat family protein / beige-related (.1.2) AT1G58230 370 / 4e-102 binding (.1) AT3G60920 192 / 3e-48 unknown protein AT5G18525 111 / 9e-24 protein serine/threonine kinases;protein tyrosine kinases;ATP binding;protein kinases (.1) AT5G16750 51 / 2e-05 TOZ TORMOZEMBRYO DEFECTIVE, Transducin family protein / WD-40 repeat family protein (.1) AT3G49660 49 / 5e-05 AtWDR5a human WDR5 \(WD40 repeat\) homolog a, Transducin/WD40 repeat-like superfamily protein (.1) AT4G02730 48 / 9e-05 AtWDR5b human WDR5 \(WD40 repeat\) homolog b, Transducin/WD40 repeat-like superfamily protein (.1) AT1G49040 49 / 0.0001 SCD1 STOMATAL CYTOKINESIS-DEFECTIVE 1, stomatal cytokinesis defective / SCD1 protein (SCD1) (.1), stomatal cytokinesis defective / SCD1 protein (SCD1) (.2), stomatal cytokinesis defective / SCD1 protein (SCD1) (.3)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.002G047700 [exp] 6156 / 0 AT1G03060 5063 / 0.0 SPIRRIG, Beige/BEACH domain ;WD domain, G-beta repeat protein (.1) Potri.002G150000 [exp] 382 / 7e-106 AT2G45540 3620 / 0.0 WD-40 repeat family protein / beige-related (.1.2) Potri.014G072600 [exp] 378 / 1e-104 AT2G45540 3647 / 0.0 WD-40 repeat family protein / beige-related (.1.2) Potri.002G111000 [exp] 376 / 5e-104 AT1G58230 3474 / 0.0 binding (.1) Potri.010G153300 [exp] 111 / 9e-24 AT5G18525 1878 / 0.0 protein serine/threonine kinases;protein tyrosine kinases;ATP binding;protein kinases (.1) Potri.005G148500 [exp] 49 / 3e-05 AT3G49660 503 / 0.0 human WDR5 \(WD40 repeat\) homolog a, Transducin/WD40 repeat-like superfamily protein (.1) Potri.007G009500 [exp] 48 / 9e-05 AT3G49660 469 / 4e-168 human WDR5 \(WD40 repeat\) homolog a, Transducin/WD40 repeat-like superfamily protein (.1) Potri.003G060500 [exp] 47 / 0.0002 AT1G15440 1349 / 0.0 \(PERIODIC TRYPTOPHAN PROTEIN 2, periodic tryptophan protein 2 (.1.2) Potri.001G173500 [exp] 47 / 0.0002 AT1G15440 1342 / 0.0 \(PERIODIC TRYPTOPHAN PROTEIN 2, periodic tryptophan protein 2 (.1.2)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10024828 [exp] 4987 / 0 AT1G03060 4870 / 0.0 SPIRRIG, Beige/BEACH domain ;WD domain, G-beta repeat protein (.1) Lus10018743 [exp] 2717 / 0 AT1G03060 2704 / 0.0 SPIRRIG, Beige/BEACH domain ;WD domain, G-beta repeat protein (.1) Lus10018744 [exp] 2663 / 0 AT1G03060 2581 / 0.0 SPIRRIG, Beige/BEACH domain ;WD domain, G-beta repeat protein (.1) Lus10009305 [exp] 377 / 1e-106 AT2G45540 1969 / 0.0 WD-40 repeat family protein / beige-related (.1.2) Lus10015858 [exp] 354 / 7e-104 AT2G45540 1209 / 0.0 WD-40 repeat family protein / beige-related (.1.2) Lus10042866 [exp] 371 / 9e-103 AT1G58230 2871 / 0.0 binding (.1) Lus10028167 [exp] 359 / 8e-99 AT1G58230 3404 / 0.0 binding (.1) Lus10018458 [exp] 52 / 1e-05 AT1G11160 668 / 0.0 Transducin/WD40 repeat-like superfamily protein (.1) Lus10011224 [exp] 52 / 1e-05 AT1G11160 665 / 0.0 Transducin/WD40 repeat-like superfamily protein (.1) Lus10003487 [exp] 50 / 2e-05 AT3G49660 489 / 6e-176 human WDR5 \(WD40 repeat\) homolog a, Transducin/WD40 repeat-like superfamily protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0186 [poplar] [flax] Beta_propeller PF00400 [poplar] [flax] WD40 WD domain, G-beta repeat CL0186 [poplar] [flax] PF02138 [poplar] [flax] Beach Beige/BEACH domain CL0266 [poplar] [flax] PH PF14844 [poplar] [flax] PH_BEACH PH domain associated with Beige/BEACH
Representative CDS sequence Show only first row Show all	>Potri.005G215400.1 pacid=42803080 polypeptide=Potri.005G215400.1.p locus=Potri.005G215400 ID=Potri.005G215400.1.v4.1 annot-version=v4.1 ATGAAATGGGTAACATTGCTTAAGGACATAAAAGAGAAGGTCGGTTTAACTCAATCTCCTTCGCCTTCTAGTTCACCAGCTACTACTGCTTCTCCTCCTC CTTCTTCATCGCCTGCTAATTCACACAATGCTTCCTCTTCTACCACTTTTCATGACTTCCCTTCATCTCCTTCCAGAGATCGACATGAATTGGAATTGGA CTTCAAGAGATTTTGGGAGGAGTTCCGCTCATCCAGTTCCGAAAAGGAGAAAGAAATGGCCTTGAATTGGACTATAGATGCTTTTTGTAGATTAGTGAAG CAGCACGCTAATGTAGCTCAATTAGTTACCATGTTAGTTGAAACACATATATTCTCTTTTGTTGTGGGAAGAGCATTTGTAACCGATATTGATAAATTAA AAATCGGCAGCAAAACAAGATCTTTGGATGTAGAGAAAGTGTTGAGATTTTTCTCTGAAGTTACAAAGGATGGCATCGGTCCCGGTTCAAATTTGTTAAC TGCTGTTGAAGCTCTTGTATCCGGGCCTATTGATAAACAATCTCTCCTTGATTCTGGAATATTATGCTGTCTCATTCACATTCTCAGTGCCCTTCTGAGC ACTGAAACCAATCTAAGGCAAAAGCTTACAAACTCCGAAGGATCATTGCCATCTGAAAAAGATCAAGATGGTGCTTTAGGGCAAGTTCGCCGGCTTGAGG TGGAAGGAAGTGTAGTGCATATTATGAAAGCATTGGCAAACCATCCTTCAGCAGCACAAAGCTTGATTGAAGACAATTCACTTCAGTTGCTGTTTCAGAT GGTTGCTAATGGGTCTTTAACAATATTTTCTCGCTATAAAGAAGGTCTTGTTCCACTGCACAGCATACAACTTCATCGGCATGCAATGCAGATACTTGGT CTTCTTTTGGTCAACGACAATGGAAGCACTGCAAGATATATACGCAAACACCATCTGATAAAAGTTCTTTTAATGGCAGTTAAAGATTTCAATCCAGACT CTGGTGATTCTGCCTACACCATGAGCATTGTGGACTTGTTACTTGAATGTGTGGAATTGTCATACAGACAGGAAGCTGGTGGTGTCAGGCTCAGGGAAGA TATACATAATGCCCATGGTTACCAGTTCCTTGTGCAGTTTGCATTGGTTCTGTCCTCTGCACCACAAAATCAGGACTCTCAGTCTGTTTATTCCAAGACT TCTCCTGCCTTTGATGGCACAGAAGATGGTTCTCATGCAATGAATGATGAACAGAGACAGGAATTAACAGAAAAAGAAGACCCCTCATCAGCTCAATTAT CACCTGCATTGTCTAGGTTGCTTGATGTTCTTGTCAATCTATCTCAAACTGGTCCTGCTGAATCTACAGCATGGTCTGCAGGAAAAAGTTCCAAATCTTC TCACACTCGACCCAGCAGAAGTCGCACGTCATCTTTAGATCGAGTTGCTGATGAAAATTGGGAGAAAGACAACAGTAAAGTTAAAGACCTTGAAGCAGTC CAGATGTTGCAAGACATTTTGCTAAAGGCAGACAGTACAGTACTTCAGGCAGAAGTATTAAATAGAATGTTTAAGATATTCTCAAGTCATCTTGAAAACT ATAAGTTGTGTCAACAATTACGGACCGTTCCACTTTTCATCCTAAATATGGCTGGTTTCCCACCATCATTGCAAGAGATAATCTTGAAAATTCTAGAATA CGCTGTGACTGTTGTGAATTGTGTTCCTGAGCAAGAGTTGCTATCTCTTTGTTGCTTATTGCAGCAACCGATAGCATCAGAGCTGAAGCACACCATACTC TCTTTCTTTGTGAAACTTTTGTCATTTGATCAACAGTACAAGAAAGTCCTGCGAGAAGTTGGTGTGCTGGAAGTTCTGTTAGATGATCTGAAGCAGAACA AGTTTCTTTTGGGCCCAGAACAACAAACTGTTAGCCCTAATCAGTCAGACAAAAAATCTAGTTCTAGTTTCAAGAAACACTTGGACACTAAAGATACTAT TCTTTCTTCACCCAAGCTAATGGAATCTGGTGGCTCAGGGAAATTTCCTATTTTTGAAATTGAGGGTACAATATCTGTTGCATGGGATTGTATGGTCTCT TTAGTGAAGAAAGCTGAAGCTAGTCAAGCATTGTTCCGGTCAGCTAATGGTGTGACCATTGTTCTTCCTTTTATTGTGTCCAATGTTCATCGTCCTGGGG TTCTCCGGATATTGTCATGTTTGATCACTGAAGATATTGCACAGACTCATCATGAAGAACTAGGTGTACTTGTTGAGGTTCTCAAAAGTGGAATGGTTAC AAGCAGTGCTGGACATCAGTATAGGCTTCGAAGTGATGCAAAATGTGACACAATGGGTGCCTTGTGGCGCATATTGAGAGTTAATACTTCAGCTCAGAGG GTCTTTGGTGAAGCCACTGGCTTTTCTCTTATGCTGACAACACTCCATAGTTTCCAAGGTGATGGGGAACAGACAGAAGAATCTTCTTTAGAGGTTTCCA TGAAGTTGTTCACATACTTACTGCGCCTGATGACAGCTGGAGTGTGTGATAATGCTATTAACAGGATAAAATTGCATACTATTATGTCATCCCACACTTT CTATGAGCTTCTATCTGAATCTGGCTTGGTTTGTGTGGAATGTGAAAAGCAAGTTATACAGCTGTTGTTGGAGCTTGCTCTTGAAATTGTGCTTCCACCA TTCTTGTCAGCAGATAGTGATGTGCCAACTAATATGATGGAATCTGGGTCAGCTTGTTTTCTTCTTACTACCCCATCAGGCCTGTTAAATCCTGATAAGG AACGAGTGTACAATGCTGCGGCTGTTAGAGTTCTGATCCGCTCGCTGTTGCTCTTCACTCCCAAAGTGCAGTTAGAAGTACTGAATCTTATAGAAAGGCT TGCTCGTGCTGGCCCCTTTAATCAGGAAAATCTCACCTCAGTAGGCTGCGTGGAACTTCTATTGGAGACAATCCACCCCTTCCTATCAGGCTCATCTACG TTACTTCTGTACATGTTGAAGATTGTGGAAGTTCTTGGTGCATATAGGCTATCTGCATCAGAACTCAGACTGCTTATTAGATATATACTGCAAACGAGGC TTATGAATTCAGGCCATATTCTTGTTGATATGATGGAGAGGTTGATTCTCATGGAAGATATGGCCTCAGAAAATGTTTCTCTGGCACCGTTTGTTGAGAT GGATATGAGTAAAATTGGCCATGCTGCTGTTCAGGTGTCTCTGGGAGAAAGATCCTGGCCTCCTTCTGCGGGTTATTCATTTGTTTGTTGGTTCCAGTTT AAACATTTCTTGAGATCACAAGCAAAGGAAACAGAGCCGTCCAAAGCTGGCCCTTCAAAAAGGCGGAGTAGTTCAAATGGGCAGCAAAATGAACAGAATA TTCTCCGTATACTTTCTGTTGGTACGGCTAGCAATGAAAACACATTTTATGCAGAACTTTATCTTCAAGAGGATGGTGTTCTAACCCTTGCTACTAGCAA CTCTAGTGCCTTGTCTTTTTCTGGATTAGAATTGGAAGAAGGCAGATGGCATCACCTTGCAGTTGTTCATAGCAAACCAAATGCTCTTGCTGGACTATTT CAAGCTAGTGTTGCAAATGTGTATCTCAATGGAAAGCTAAAACACACAGGGAAACTAGGATATTCACCATCTCCGGCTGGAAAACCTTTGCAGGTCACCA TTGGGACACCAGTTAATTGTGCAAGGGTTAGTGAGTTGACATGGAAACTTCGTTCTTGCTACCTTTTTGAGGAGGTGCTTACATCAGGGTGTATTTGTTT CATGTACATTCTTGGCAGAGGATACAGAGGGCTCTTCCAAGACTCGAACCTTCTACGTTTTGTCCCCAACCAGGCTTGTGGTGGTGGTAGCATGGCCATC TTGGATTCATTAGATGCTGAATTGCCTTTGGCAACACAGAAGCTCGAGAGTGCTAGCAAGCAGGGGGATTCTAAAGCAGATGGTAGTGGGATTGTTTGGG ATTTGGAGAGATTAGGAAACCTCTCATTGCAGCTTTCTGGAAAGAAACTTATTTTTGCATTTGATGGAACATGTACTGAATCTGTTCGAGCATCTGGCAT ATTCTCATTGCTCAATCTGGTTGATCCTATGTCAGCTGCTGCCTCTCCTATCGGGGGTATACCACGATTTGGACGCCTTCATGGAGATATCTATGTTTGT AAGCAATCTGTAATTGGTGATGCAATCCGCCCTGTAGGTGGTATGGCTGTTGTCCTGGCCCTTGTTGAAGCTGCTGAAACCAGGGATATGCTTCACATGG CTTTGACATTACTTGCCTGTGCTCTTCATCAGAATCCCCAAAATGTGAAAGATATGAAAAAATATAGGGGATACCATTTGCTAGCTCTGTTTCTGCGTCG TAGAATGTCATTATTTGACATGCAATCTCTTGAGATATTTTTTCAAATTGCTGCATGTGAAGCTTCATTTTCTGAACCAAAGAAGTTGGAACGCAGGCAA GCTACTCTATCACCTGCTGCCACTTTGCAGGACACCAGCTTCGAGGAACTCAGCTTGTCAAAATTTCGTGATGAAATTTCTTCGGTTGGATCTCATGGGG ACATGGATGATTTTTCTGCACAAAAAGATTCATTTAGCCATATTTCTGAACTAGACAATTCTGATATGCTAGTTGAAACTTCAAATTGTATCGTCTTGTC AAATGCCGATATGGTTGAGCATGTCTTGTTGGACTGGACATTGTGGGTGACTGCCCCAGTTTCAATCCAAATTCAACTTCTAGGATTTCTGGAGCATTTG GTTTCCATGCATTGGTACAGGAATCATAACCTTACCGTTCTGCGTCGAATAAACCTTGTTCAGCATTTGCTAGTGACTTTGCAGCGTGGTGATGTTGAAG TTCCTGTTTTGGAGAAATTAGTGGTGTTGCTTGGGGTCATTTTGGAAGATGGGTTTCTGGCTTCTGAACTAGAGAATGTGGTGAGGTTTGTGATTATGAC ATTTGACCCACCTGAACTGAAACCAAGGCATCAAATAGCTCGAGAATCAATGGGTAAGCATGTAATTGTAAGGAATATGCTCCTAGAGATGCTTATTGAT CTACAAGTAACCATCAAATCAGACGAGTTACTTGAGCAGTGGCATAAGATTGTGTCATCAAAACTGGTAACATATTTTCTTGATGAAGCTGCCCATCCTA CAAGCATGAGATGGATCATGACTCTTCTTGGTGTGTCTCTCACTTCTTCTCCCACTTTTGCTCTTAAATTTCGCACCAGTGGTGGTTATCAGGGTCTTAT GCGGGTGCTTCCTAGTTTTTATGATTCTCCTGATATATATTATATTTTGTTCTGTCTGATATTTGGAAAGCCCGTGTACCCAAGACTACCAGAAGTGCGC ATGCTAGATTTTCATGCCCTTATGCCAAGTGATGGAAGCTATGTGGAGTTGAAATATGTGGAGCTATTGGAATCAGTGATTGTGATGGCAAAATCTACTT TTGATAGGTTAAGCATGCAGTCCGTGCTTGCTCATCAAACTGGTAATCTTTCCCAGATTGGTGCTAGCCTTGTCGCAGAGCTTGTGGAAGGAAATGCAGA CATGACAGGAGAGCTTCAAGGTGAAGCTTTGATGCATAAGACATATGCAGCGCGCTTAATGGGTGGTGAGGCATCAGCTCCTGCTGCTGCAACCGCAGTT CTGAGATTTATGGTTGATCTCGCAAAGATGTCTCCTCCCTTTTCAGCTGCTTGCAGAAGGCCTGAGTTTCTTGAAAGCTGCATCGACCTTTATTTTTCTT GCACCAGAGCAGCTTATGCAGTGAAGATGGTGAAAGCACTTTCTGAGAAGACAGAAGAAAAGGAGTTGAATGATGGTGATGATACCAGCAGTTCTCAGAA TACTTTCTCTAGCTTACCGCTTGAACAAGAACAATCTGCAAAGACCTCCATTAGTGCTGGAAGCTTTCCTCAAGGGCATGCAAGTACAAGTTCTGAAGAT ATGCTTGTGTCCCTAAATGATGTGGCTGATGTTAAAGCAGAGATTGCCATCTCTAATTCCCACGAGGAATTGAAAAAATCAGCCCAAGGTGTCCCAGCTG TTCAGAACTTTGTTGGGGATAATGTTGTTCAGAATTCTGCCATCTCCAGCTCAAATGAATTCAATATCCGTAATGTTGATGGCAATATGGATTCCTTTCG ACAGGCAGATTCCCTGAGTTCAGCATCTCTCAACATACCAGATTCTCCTATTATATCCGAGAAGTCGAGCACAAGAATCCCCCTCACACCACCATCATCA CCGGCCCTTGCATTGTCATCTTGGCTTGGCAGCGCGTCCCACAAAGAATCCAAAGCTTCATTACAAGCCACTCCTTCCATGGAGTCTTCTGTGTCTGGTA GTGAATTTGATCCATCGGCGGACTTGAAGGCTTGTTCCCCAGGGCCATCTGCTGCAAACTCATTTTTTGCAGTTAGCCCGAAGCTTCTCCTTGAAATGGA TGATTCTGGCTATGGGGGAGGACCGTGTTCTGCAGGAGCGAATGCTGTGTTAGATTTCATGGCAGAAGTTCTTTCTGATTTTATCACTGAGCAGATTAAA GCAGCACAGGTTATAGAGGGCATCTTGGAAACAGTACCTTTATATGTTGATGCTGAATCTGTATTGGTTTTTCAGGGTTTGTGCCTTAGCAGGTTGATGA ACTTTGTGGAAAGGCGTCTTTTGCGTGATGATGAGGAAGATGAGAAAAAGCTAGACAAAAGTCGATGGACCTCAAACCTGGATGCTTTATGTTGGATGAT AGTAGATCGTGTTTATATGGGCTCCTTTCCTCAACCTGCTGGTGTGTTGAAAACTCTGGAGTTCTTGTTGTCAATGTTACAGCTGGCAAATAAAGATGGT CGCATTGAAGAAGCAGCTCCTGCAGGAAAGAGTCTTTTATCTATCACAAGAGGAAGCAGGCAACTTGATACTTTTATAAATTCACTCCTTAAGAACACAA ATCGTATGATAATGTACTGTTTTTTGCCACCATTTTTGGTCACCATAGGAGAGGATGATCTTCTTTCATGCTTAGGTTTGTTTATTGAGCCCAAGAAAAG ATTACCATCCAATTCTTCACAAGATGATTCAGGAATTGATATCTGCACAGTTTTGCAGTTGCTAGTTGCTCACAAGCGCATTATTTTCTGTCCCAGCAAT GTTGATACTGATCTGAATTGCTGTCTTTGTGTAAATCTAATATCTCTTCTCCATGATCAAAGGCAAAACGTTCAGAACATGGCAGTCGATATTGTCAAGT ATCTGCTGGTGCACCGCAGGGCTGCGCTGGAAGACTTGCTTGTTTCTAAACCAAATCAAGGGCAGCACATAGATGTACTACATGGTGGCTTCGACAAATT ATTGACTGGAAGTTTGTCTACTTTCTTTGAGTGGTTTCAGAGTTCTGAACTGATGGTCAACAAAGTATTGGAGCAGTGTGCAGCCATTATGTGGGTTCAG TGTATTGCTGGATCGGCAAAATTTCCAGGAGTGAGAATTAAAGGTTTGGAGGTTCGTCGTAGGAGGGAAATGGGTAGAAGATCACGGGATATTTTGAAGT TGGACCAAAAACATTGGGAACAGGTAAATGAACGAAGATATGCATTGGACATGCTTCGTGATGCAATGTCTACTGAGTTAAGAGTTGTCCGCCAAGATAA GTATGGATGGGTTCTCCATGCTGAAAGTGAGTGGCAAACCCTTCTTCAACAACTTGTACATGAGCGTGGGATATTCCCACTGCAGAAATCCTCGGCAACT GAAGATCCTGAATGGCAGCTTTGTCCCATTGAAGGACCATACAGGATGCGCAAAAAGCTTGAGCGCTGCAAATTGAGGATCGACACTGTTCAAAATGTTC TTGATGGACAGTTTGAGTTAGGAGAAGCAGAGCTGTTGAAGGGAAAATATGAGGATGGCCCAGATGCTTCTGATACTGACACTGAATTGTTTTTTCATCT TTTAACTGATGGCGCCAAACAAAATGGTGTGGATGGTGATATGTATGGTGAATTTCTTAAAGAATCAGATGATGTGAAAGGTACAGCTTCTGTTAGAAGT GGATGGAATGATGACCGAGCTAGTGACATGAATGAAGCAAGTCTTCACTCAGCACTTGAATTTGGTGTCAAGTCTAGTACCGTGTCTGTCCCAATGTCAG AGAGCATGCATGAAAAATCAGACGTTGGAACTCCAATGCAATCATCGTCTAATAAAGCAGATGGAATCATTGTCACTGAAGATAAATCAGATAAAGAACT GAATGATAATGGTGAATATCTGATCCGACCATATTTGGAACCTCAAGAAAAGATACGATTCAAATATAACTGTGAGCGAGTTGTGGGTTTGGACAAGCAT GATGGTATATTTTTGATAGGGGAGCTTTCTTTATACATAATCGAGAATTTTTACGTTGATGATTCTGGGTGTATTTGTGAAAAAGAATGCGAGGATGAAC TCTCTGTTATTGATCAGGCTTTGGGTGTAAAGAAGGATGTTACTGGCAGTGCTGATTTCCAATCCAAGTCAACTTCATCCTGGATCACAACAGTAAAGGC ATGTGTTGGTGGAAGGGCATGGGCCTATAATGGTGGTGCATGGGGCAAGGAGAAAGTGTGTACTAGTGGTAATTTACCCCATCCCTGGCATATGTGGAAG CTCAACAGTGTTCATGAGATTCTGAAACGTGATTACCAGCTCCGACCTGTTGCTGTTGAGATATTCAGCATGGATGGATGCAATGATCTCCTCGTGTTCC ACAAAAAGGAGAGAGAAGAAGTATTCAAAAATCTGGTTGCCATGAATCTTCCAAGAAATAGCATGTTGGATACTACAATTTCTGGATCAGTAAAACAAGA AAGTAACGAGGGCAGTCGCTTATTTAAGATAATGGCTAAATCCTTCTCTAAAAGGTGGCAAAATGGAGAAATTAGCAATTTCCAATATCTCATGCATCTC AACACCTTGGCCGGTAGAGGATACAGTGATCTGACCCAATATCCAGTATTTCCATGGGTTCTCGCTGATTATGAGAGTGAAAATCTGGATTTGTCCAATC CTAAATCCTTTCGTAAGCTCGAGAAGCCAATGGGTTGTCAAACACAAGAGGGAGAAGATGAATTTAAGAAACGATATGAGACCTGGGATGATCCAGAGGT TCCAAAATTTCATTATGGTTCTCACTATTCTAGTGCCGGAATTGTCCTCTTCTACCTTTTACGCCTTCCACCATTCAGTGTAGAGAATCAGAAGCTGCAG GGTGGCCAATTTGATCATGCTGATCGTCTTTTCAACAGTATTCGAGATACTTGGTCAAGTGCAGCAGGGAAGGGAAATACATCTGATGTCAAGGAATTGA TTCCAGAATTCTTCTACATGCCAGAATTTCTGGAGAACATGTTCAATCTTGATCTGGGAGAGAAACAATCAGGAGAGAAGGTTAGTGATGTCCTCTTACC CCCATGGGCGAAAGGCAGTGCTAGAGATTTCATTAGGAAGCATAGAGAAGCACTGGAATCTGATTTTGTTTCAGAAAATCTTCATCATTGGATAGATCTC ATTTTTGGATATAAACAGAGAGGGAAGGCAGCTGAAGAAGCTGTTAATGTTTTCTATCATTACACATACGAGGGGAGTGTGGACATAGACTCGGTAACAG ATCCTTCAATGAAAGCCTCCATTCTAGCACAAATCAATCACTTTGGGCAGACACCCAAGCAGCTATTCCTCAAACCCCATGTGAAAAGACGTTCCAATAG AAGGATTCATCACCCACTCAAGTATTCATCCCATCTCACTCCACATGAAATACGCAAGAGCTCATCTGCCATAACCCAGATTGTTACTGTTCACGAGAAA ATTCTTGTGGCGGGCACAAATAGTTTGCTCAAGCCTACAACATATACCAAATATGTTGCTTGGGGTTTCCCAGATCGTAGTTTGAGATTTATGAGCTATG ATCAAGATAGACTCCTCTCAACTCATGAGAATCTTCACGGGGGCAGCCAGATTCAGTGTGCTGGTGCTAGTCATGATGGTCAAATTTTGGTTACAGGAGC TGATGATGGGTTACTCTGTGTTTGGAGAATCAGCAAGGATGGCCCCCGTGCGCTGCGGCATCTGCAGTTGGAGAATGCACTTTGTGGTCACACGGCCAAA ATCACATGCCTTCATGTTAGCCAGCCTTACATGCTGATTGTGAGTGGCTCTGATGACTGCACAGTTATTTTATGGGACCTCAGCTCCTTGGTTTTTGTTA GGCAACTGCCAGAGTTTCCTGTGCCAATTTCAGCAATTTATGTGAATGACTTGACTGGAGAGATTGTGACAGCAGCTGGAATTCTGCTTGCTGTCTGGAG CATCAATGGGGACTGCCTTGCAGTGATTAACACATCCCAACTGCCATCTGATTCTATTCTCTCAGTGACGAGCTGTACGTTTTCCGATTGGCTGGACACA AACTGGTATGTGACTGGCCACCAGAGTGGGGCAGTTAAGGTGTGGCACATGGTTCACTGCTCCAACCAAGAGAGTGCCTTAAGCAAATCTACCAGCAATT TGACGGGTGGGCTAAATTTAGGTGATAAGGTACCGGAGTACAGGTTACTTCTCCACAAGGTACTCAAGTTTCACAAACATCCAGTTACTTCCCTTCATCT CACGAGCGACCTGAAGCAGTTACTCAGTGGGGATTCTGGTGGGCATTTGCTCTCATGGACACTACCAGATGAGAGCTTGCTGACTTCATCTAATCGGGGG TGA
AA sequence Show only first row Show all	>Potri.005G215400.1 pacid=42803080 polypeptide=Potri.005G215400.1.p locus=Potri.005G215400 ID=Potri.005G215400.1.v4.1 annot-version=v4.1 MKWVTLLKDIKEKVGLTQSPSPSSSPATTASPPPSSSPANSHNASSSTTFHDFPSSPSRDRHELELDFKRFWEEFRSSSSEKEKEMALNWTIDAFCRLVK QHANVAQLVTMLVETHIFSFVVGRAFVTDIDKLKIGSKTRSLDVEKVLRFFSEVTKDGIGPGSNLLTAVEALVSGPIDKQSLLDSGILCCLIHILSALLS TETNLRQKLTNSEGSLPSEKDQDGALGQVRRLEVEGSVVHIMKALANHPSAAQSLIEDNSLQLLFQMVANGSLTIFSRYKEGLVPLHSIQLHRHAMQILG LLLVNDNGSTARYIRKHHLIKVLLMAVKDFNPDSGDSAYTMSIVDLLLECVELSYRQEAGGVRLREDIHNAHGYQFLVQFALVLSSAPQNQDSQSVYSKT SPAFDGTEDGSHAMNDEQRQELTEKEDPSSAQLSPALSRLLDVLVNLSQTGPAESTAWSAGKSSKSSHTRPSRSRTSSLDRVADENWEKDNSKVKDLEAV QMLQDILLKADSTVLQAEVLNRMFKIFSSHLENYKLCQQLRTVPLFILNMAGFPPSLQEIILKILEYAVTVVNCVPEQELLSLCCLLQQPIASELKHTIL SFFVKLLSFDQQYKKVLREVGVLEVLLDDLKQNKFLLGPEQQTVSPNQSDKKSSSSFKKHLDTKDTILSSPKLMESGGSGKFPIFEIEGTISVAWDCMVS LVKKAEASQALFRSANGVTIVLPFIVSNVHRPGVLRILSCLITEDIAQTHHEELGVLVEVLKSGMVTSSAGHQYRLRSDAKCDTMGALWRILRVNTSAQR VFGEATGFSLMLTTLHSFQGDGEQTEESSLEVSMKLFTYLLRLMTAGVCDNAINRIKLHTIMSSHTFYELLSESGLVCVECEKQVIQLLLELALEIVLPP FLSADSDVPTNMMESGSACFLLTTPSGLLNPDKERVYNAAAVRVLIRSLLLFTPKVQLEVLNLIERLARAGPFNQENLTSVGCVELLLETIHPFLSGSST LLLYMLKIVEVLGAYRLSASELRLLIRYILQTRLMNSGHILVDMMERLILMEDMASENVSLAPFVEMDMSKIGHAAVQVSLGERSWPPSAGYSFVCWFQF KHFLRSQAKETEPSKAGPSKRRSSSNGQQNEQNILRILSVGTASNENTFYAELYLQEDGVLTLATSNSSALSFSGLELEEGRWHHLAVVHSKPNALAGLF QASVANVYLNGKLKHTGKLGYSPSPAGKPLQVTIGTPVNCARVSELTWKLRSCYLFEEVLTSGCICFMYILGRGYRGLFQDSNLLRFVPNQACGGGSMAI LDSLDAELPLATQKLESASKQGDSKADGSGIVWDLERLGNLSLQLSGKKLIFAFDGTCTESVRASGIFSLLNLVDPMSAAASPIGGIPRFGRLHGDIYVC KQSVIGDAIRPVGGMAVVLALVEAAETRDMLHMALTLLACALHQNPQNVKDMKKYRGYHLLALFLRRRMSLFDMQSLEIFFQIAACEASFSEPKKLERRQ ATLSPAATLQDTSFEELSLSKFRDEISSVGSHGDMDDFSAQKDSFSHISELDNSDMLVETSNCIVLSNADMVEHVLLDWTLWVTAPVSIQIQLLGFLEHL VSMHWYRNHNLTVLRRINLVQHLLVTLQRGDVEVPVLEKLVVLLGVILEDGFLASELENVVRFVIMTFDPPELKPRHQIARESMGKHVIVRNMLLEMLID LQVTIKSDELLEQWHKIVSSKLVTYFLDEAAHPTSMRWIMTLLGVSLTSSPTFALKFRTSGGYQGLMRVLPSFYDSPDIYYILFCLIFGKPVYPRLPEVR MLDFHALMPSDGSYVELKYVELLESVIVMAKSTFDRLSMQSVLAHQTGNLSQIGASLVAELVEGNADMTGELQGEALMHKTYAARLMGGEASAPAAATAV LRFMVDLAKMSPPFSAACRRPEFLESCIDLYFSCTRAAYAVKMVKALSEKTEEKELNDGDDTSSSQNTFSSLPLEQEQSAKTSISAGSFPQGHASTSSED MLVSLNDVADVKAEIAISNSHEELKKSAQGVPAVQNFVGDNVVQNSAISSSNEFNIRNVDGNMDSFRQADSLSSASLNIPDSPIISEKSSTRIPLTPPSS PALALSSWLGSASHKESKASLQATPSMESSVSGSEFDPSADLKACSPGPSAANSFFAVSPKLLLEMDDSGYGGGPCSAGANAVLDFMAEVLSDFITEQIK AAQVIEGILETVPLYVDAESVLVFQGLCLSRLMNFVERRLLRDDEEDEKKLDKSRWTSNLDALCWMIVDRVYMGSFPQPAGVLKTLEFLLSMLQLANKDG RIEEAAPAGKSLLSITRGSRQLDTFINSLLKNTNRMIMYCFLPPFLVTIGEDDLLSCLGLFIEPKKRLPSNSSQDDSGIDICTVLQLLVAHKRIIFCPSN VDTDLNCCLCVNLISLLHDQRQNVQNMAVDIVKYLLVHRRAALEDLLVSKPNQGQHIDVLHGGFDKLLTGSLSTFFEWFQSSELMVNKVLEQCAAIMWVQ CIAGSAKFPGVRIKGLEVRRRREMGRRSRDILKLDQKHWEQVNERRYALDMLRDAMSTELRVVRQDKYGWVLHAESEWQTLLQQLVHERGIFPLQKSSAT EDPEWQLCPIEGPYRMRKKLERCKLRIDTVQNVLDGQFELGEAELLKGKYEDGPDASDTDTELFFHLLTDGAKQNGVDGDMYGEFLKESDDVKGTASVRS GWNDDRASDMNEASLHSALEFGVKSSTVSVPMSESMHEKSDVGTPMQSSSNKADGIIVTEDKSDKELNDNGEYLIRPYLEPQEKIRFKYNCERVVGLDKH DGIFLIGELSLYIIENFYVDDSGCICEKECEDELSVIDQALGVKKDVTGSADFQSKSTSSWITTVKACVGGRAWAYNGGAWGKEKVCTSGNLPHPWHMWK LNSVHEILKRDYQLRPVAVEIFSMDGCNDLLVFHKKEREEVFKNLVAMNLPRNSMLDTTISGSVKQESNEGSRLFKIMAKSFSKRWQNGEISNFQYLMHL NTLAGRGYSDLTQYPVFPWVLADYESENLDLSNPKSFRKLEKPMGCQTQEGEDEFKKRYETWDDPEVPKFHYGSHYSSAGIVLFYLLRLPPFSVENQKLQ GGQFDHADRLFNSIRDTWSSAAGKGNTSDVKELIPEFFYMPEFLENMFNLDLGEKQSGEKVSDVLLPPWAKGSARDFIRKHREALESDFVSENLHHWIDL IFGYKQRGKAAEEAVNVFYHYTYEGSVDIDSVTDPSMKASILAQINHFGQTPKQLFLKPHVKRRSNRRIHHPLKYSSHLTPHEIRKSSSAITQIVTVHEK ILVAGTNSLLKPTTYTKYVAWGFPDRSLRFMSYDQDRLLSTHENLHGGSQIQCAGASHDGQILVTGADDGLLCVWRISKDGPRALRHLQLENALCGHTAK ITCLHVSQPYMLIVSGSDDCTVILWDLSSLVFVRQLPEFPVPISAIYVNDLTGEIVTAAGILLAVWSINGDCLAVINTSQLPSDSILSVTSCTFSDWLDT NWYVTGHQSGAVKVWHMVHCSNQESALSKSTSNLTGGLNLGDKVPEYRLLLHKVLKFHKHPVTSLHLTSDLKQLLSGDSGGHLLSWTLPDESLLTSSNRG

---

DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

---

Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT1G03060		SPI	SPIRRIG, Beige/BEACH domain ;W...		Potri.005G215400 [exp]	0	1
AT4G32010	B3	HSL1, HSI2-L1, ...	VP1/ABI3-LIKE 2, HSI2-like 1 (...		Potri.006G108300 [exp]	1.41	0.8653
AT1G71010		FAB1C	FORMS APLOID AND BINUCLEATE CE...		Potri.008G128800 [exp]	2.00	0.8521
AT5G58000			Reticulon family protein (.1)		Potri.006G185700 [exp]	3.16	0.7978
AT1G30900		VSR6, VSR3;3, B...	VACUOLAR SORTING RECEPTOR 3;3,...		Potri.003G155300 [exp]	6.00	0.8001
					Potri.010G220800 [exp]	7.14	0.7622
AT5G47490			RGPR-related (.1)		Potri.001G157800 [exp]	7.48	0.7675
AT1G27850			unknown protein		Potri.008G178600 [exp]	8.94	0.8263
AT1G34260		FAB1D	FORMS APLOID AND BINUCLEATE CE...		Potri.019G087000 [exp]	9.48	0.7609
AT4G35300		TMT2	tonoplast monosaccharide trans...		Potri.005G255400 [exp]	10.67	0.7594
AT3G53260		PAL2, ATPAL2	phenylalanine ammonia-lyase 2 ...		Potri.010G224100 [exp]	10.90	0.8072	PAL.3

Compare expression of checked genes

Potri.005G215400 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.