Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol	CYP94.8
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT3G48520 414 / 1e-140 CYP94B3 cytochrome P450, family 94, subfamily B, polypeptide 3 (.1) AT5G63450 409 / 2e-138 CYP94B1 "cytochrome P450, family 94, subfamily B, polypeptide 1", cytochrome P450, family 94, subfamily B, polypeptide 1 (.1) AT3G56630 405 / 4e-137 CYP94D2 "cytochrome P450, family 94, subfamily D, polypeptide 2", cytochrome P450, family 94, subfamily D, polypeptide 2 (.1) AT1G34540 401 / 2e-135 CYP94D1 "cytochrome P450, family 94, subfamily D, polypeptide 1", cytochrome P450, family 94, subfamily D, polypeptide 1 (.1) AT2G27690 387 / 5e-130 CYP94C1 "cytochrome P450, family 94, subfamily C, polypeptide 1", cytochrome P450, family 94, subfamily C, polypeptide 1 (.1) AT3G01900 381 / 9e-128 CYP94B2 "cytochrome P450, family 94, subfamily B, polypeptide 2", cytochrome P450, family 94, subfamily B, polypeptide 2 (.1) AT5G08250 318 / 4e-103 Cytochrome P450 superfamily protein (.1) AT5G58860 311 / 2e-100 CYP86A1 "cytochrome P450, family 86, subfamily A, polypeptide 1", cytochrome P450, family 86, subfamily A, polypeptide 1 (.1) AT5G23190 313 / 3e-100 CYP86B1 "cytochrome P450, family 86, subfamily B, polypeptide 1", cytochrome P450, family 86, subfamily B, polypeptide 1 (.1) AT1G63710 307 / 1e-98 CYP86A7 "cytochrome P450, family 86, subfamily A, polypeptide 7", cytochrome P450, family 86, subfamily A, polypeptide 7 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.005G220700 [exp] 866 / 0 AT3G48520 436 / 4e-149 cytochrome P450, family 94, subfamily B, polypeptide 3 (.1) Potri.002G042100 [exp] 796 / 0 AT3G48520 451 / 1e-154 cytochrome P450, family 94, subfamily B, polypeptide 3 (.1) Potri.002G042200 [exp] 776 / 0 AT5G63450 442 / 3e-151 "cytochrome P450, family 94, subfamily B, polypeptide 1", cytochrome P450, family 94, subfamily B, polypeptide 1 (.1) Potri.012G096800 [exp] 414 / 1e-140 AT3G48520 611 / 0.0 cytochrome P450, family 94, subfamily B, polypeptide 3 (.1) Potri.016G031700 [exp] 412 / 5e-140 AT3G56630 629 / 0.0 "cytochrome P450, family 94, subfamily D, polypeptide 2", cytochrome P450, family 94, subfamily D, polypeptide 2 (.1) Potri.001G331100 [exp] 395 / 5e-133 AT3G01900 597 / 0.0 "cytochrome P450, family 94, subfamily B, polypeptide 2", cytochrome P450, family 94, subfamily B, polypeptide 2 (.1) Potri.004G185300 [exp] 384 / 8e-129 AT2G27690 604 / 0.0 "cytochrome P450, family 94, subfamily C, polypeptide 1", cytochrome P450, family 94, subfamily C, polypeptide 1 (.1) Potri.006G033600 [exp] 380 / 3e-127 AT3G56630 576 / 0.0 "cytochrome P450, family 94, subfamily D, polypeptide 2", cytochrome P450, family 94, subfamily D, polypeptide 2 (.1) Potri.009G145400 [exp] 379 / 4e-127 AT2G27690 622 / 0.0 "cytochrome P450, family 94, subfamily C, polypeptide 1", cytochrome P450, family 94, subfamily C, polypeptide 1 (.1)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10014741 [exp] 650 / 0 AT5G63450 461 / 1e-158 "cytochrome P450, family 94, subfamily B, polypeptide 1", cytochrome P450, family 94, subfamily B, polypeptide 1 (.1) Lus10014742 [exp] 645 / 0 AT5G63450 451 / 8e-155 "cytochrome P450, family 94, subfamily B, polypeptide 1", cytochrome P450, family 94, subfamily B, polypeptide 1 (.1) Lus10033853 [exp] 643 / 0 AT5G63450 474 / 7e-164 "cytochrome P450, family 94, subfamily B, polypeptide 1", cytochrome P450, family 94, subfamily B, polypeptide 1 (.1) Lus10033852 [exp] 589 / 0 AT5G63450 457 / 4e-157 "cytochrome P450, family 94, subfamily B, polypeptide 1", cytochrome P450, family 94, subfamily B, polypeptide 1 (.1) Lus10036024 [exp] 392 / 2e-131 AT3G56630 380 / 3e-127 "cytochrome P450, family 94, subfamily D, polypeptide 2", cytochrome P450, family 94, subfamily D, polypeptide 2 (.1) Lus10041562 [exp] 390 / 2e-130 AT3G01900 597 / 0.0 "cytochrome P450, family 94, subfamily B, polypeptide 2", cytochrome P450, family 94, subfamily B, polypeptide 2 (.1) Lus10012531 [exp] 381 / 2e-127 AT3G01900 592 / 0.0 "cytochrome P450, family 94, subfamily B, polypeptide 2", cytochrome P450, family 94, subfamily B, polypeptide 2 (.1) Lus10040687 [exp] 318 / 6e-103 AT5G58860 803 / 0.0 "cytochrome P450, family 86, subfamily A, polypeptide 1", cytochrome P450, family 86, subfamily A, polypeptide 1 (.1) Lus10018217 [exp] 316 / 6e-102 AT5G58860 802 / 0.0 "cytochrome P450, family 86, subfamily A, polypeptide 1", cytochrome P450, family 86, subfamily A, polypeptide 1 (.1) Lus10032278 [exp] 304 / 1e-96 AT1G63710 792 / 0.0 "cytochrome P450, family 86, subfamily A, polypeptide 7", cytochrome P450, family 86, subfamily A, polypeptide 7 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF00067 [poplar] [flax] p450 Cytochrome P450
Representative CDS sequence Show only first row Show all	>Potri.005G220900.2 pacid=42805253 polypeptide=Potri.005G220900.2.p locus=Potri.005G220900 ID=Potri.005G220900.2.v4.1 annot-version=v4.1 ATGTCTATTATTGAGCTCTTAGCATCACTTGCCCTTTTACTTGTCCCACTCTTCTTCTATCTCACCAAGAATTCCAAGTCCAAAGCATCATCAAAATCTA ATCCAAACCTAAAATCATACCCCTTAATTGGATCCTCTGTAGCCATTTTTGCCAATAGAAACCGATTCATCCAGTGGACTTCAGATCTTATCCAAAACTC ACCCACTGCCACTGTTGTTATCCGCCGTTTCTTGGATCATAGCCGTGTTCTTACAGGAAACCCAGCAAATGTCCAACACATGCTTAAAACCCAGTTTTAC AACTATGAGAAAGGTAGCAAAGCTCGGCGAACCCTCTTTGATTTTCTTGGAAACGGTATCTTTAACACTGATGGTGATTCCTGGAAGTTTCAAAGACAAG TTTCCAGCCATGAATTCAACACCAAAGCATTGCGTAAATTCGTTGAGACCGTTGTCGATACTGAAGTATCTCAACGCTTAATCCCGATTCTCTCCACTGC TGCGGCTAACAATACAGTTCTTGATTTGCAAGACATACTTCAAAGATTCGCTTTTGACAACATCTGCAAGATCGCTTTCGGATACGATCCTGCATACTTG CTGCCTGATCTCCCCGAAGCCGCATTTGCGAAAACTTTTGAAGAAGCTGCCAAGATATCCAGTGACAGGCTCGCTACGATATTCCCCCTTCTTTGGAAGA TTAAGAGGGTCTTCAATATTGGATCAGAGAAACGCCTCAAAGAAGCATCCTCTGAATTACGTGAGTTCGCCAGAAACATCATCAAAGAAAAGAAGAAGGA ACTCAGCAACAAATCATCCCTCGAAACCGTAGATCTTCTATCACGTTTCTTGAGCTCAGGCCATTCTGACGAGGACTTTGTCACTGATATTGTCATCAGT TTTATACTAGCAGGCCGAGACACCACTTCCGCTGCCTTAACATGGTATTTCTGGCTACTCTCTCAAAACCCAGAAGTGGAAAAGGAAATAGTCGGAGAAA TAAATGACAAATCGGAGAGTCCAGTTTTTGAAGAAGTCAAGGACATGGTCTACACACATGCTTCTTTATGTGAGAGCATGAGGCTGTACCCTCCTGTCCC AAGGGATAGCAAGGTTGCAATGCAGGACGATGTCTTGCCCGACGGGACTGTGATTAAGAAGGGAATGAGAGTGTCTTACCATCCGTATGCAATGGGGAGG CTCGAGATGTTGTGGGGTCCGGACTGGGAAAAGTTCAAGCCAGAGAGATGGCTGCAGGGAGCTGGCGATGGAGTTAATAGTAATGGGAAGTGGAGTTTTG TAGGGAGGGACCCATACTCCTACCCTGTTTTTCAGGCCGGACCAAGGATTTGTTTGGGCAAGGACATGGCTTTCTTGCAAATGAAAAGGGTGGTAGCCGG GATTTTACGGAGGTTTAAGGTTGTTCCTGCTGCAGAGGAGGGTTTTGAGCCCGTGTTTGTCTCTTATTTGACGTCCAAAATGCAGGGTGGTTTTCCTGTG AGGTTCGAGGAGAGAGCTAATTAA
AA sequence Show only first row Show all	>Potri.005G220900.2 pacid=42805253 polypeptide=Potri.005G220900.2.p locus=Potri.005G220900 ID=Potri.005G220900.2.v4.1 annot-version=v4.1 MSIIELLASLALLLVPLFFYLTKNSKSKASSKSNPNLKSYPLIGSSVAIFANRNRFIQWTSDLIQNSPTATVVIRRFLDHSRVLTGNPANVQHMLKTQFY NYEKGSKARRTLFDFLGNGIFNTDGDSWKFQRQVSSHEFNTKALRKFVETVVDTEVSQRLIPILSTAAANNTVLDLQDILQRFAFDNICKIAFGYDPAYL LPDLPEAAFAKTFEEAAKISSDRLATIFPLLWKIKRVFNIGSEKRLKEASSELREFARNIIKEKKKELSNKSSLETVDLLSRFLSSGHSDEDFVTDIVIS FILAGRDTTSAALTWYFWLLSQNPEVEKEIVGEINDKSESPVFEEVKDMVYTHASLCESMRLYPPVPRDSKVAMQDDVLPDGTVIKKGMRVSYHPYAMGR LEMLWGPDWEKFKPERWLQGAGDGVNSNGKWSFVGRDPYSYPVFQAGPRICLGKDMAFLQMKRVVAGILRRFKVVPAAEEGFEPVFVSYLTSKMQGGFPV RFEERAN

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT3G48520		CYP94B3	cytochrome P450, family 94, su...		Potri.005G220900 [exp]	0	1	CYP94.8
AT1G67050			unknown protein		Potri.017G115801 [exp]	17.32	0.8812
AT1G58122		CPuORF45	conserved peptide upstream ope...		Potri.002G104450 [exp]	19.97	0.7918
AT4G20970	bHLH	bHLH162	basic helix-loop-helix (bHLH) ...		Potri.012G079100 [exp]	24.10	0.8392
AT4G27290			S-locus lectin protein kinase ...		Potri.011G125801 [exp]	24.41	0.8812
					Potri.001G388100 [exp]	25.33	0.8705
AT1G19670		CORI1, ATHCOR1,...	CORONATINE-INDUCED PROTEIN 1, ...		Potri.005G214200 [exp]	27.71	0.8208
					Potri.011G125551 [exp]	30.33	0.8737
AT3G61460		BRH1	brassinosteroid-responsive RIN...		Potri.010G133200 [exp]	33.76	0.7752
AT5G35110			unknown protein		Potri.018G113700 [exp]	35.55	0.7410
AT5G07990		CYP75B1, D501, ...	TRANSPARENT TESTA 7, CYTOCHROM...		Potri.001G167900 [exp]	40.12	0.7676

Compare expression of checked genes

Potri.005G220900 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.