Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser] Popgenie AspWood
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT4G16310 1194 / 0 LDL3 LSD1-like 3 (.1) AT1G62830 328 / 6e-95 ATLSD1, ATSWP1, LDL1, SWP1 ARABIDOPSIS LYSINE-SPECIFIC HISTONE DEMETHYLASE, LSD1-like 1 (.1) AT3G10390 327 / 3e-94 FLD FLOWERING LOCUS D, Flavin containing amine oxidoreductase family protein (.1) AT3G13682 313 / 1e-90 LDL2 LSD1-like2 (.1) AT1G65840 237 / 2e-67 ATPAO4 polyamine oxidase 4 (.1) AT3G59050 224 / 4e-63 ATPAO3 polyamine oxidase 3 (.1) AT2G43020 219 / 4e-61 ATPAO2 polyamine oxidase 2 (.1) AT4G29720 152 / 4e-38 ATPAO5 polyamine oxidase 5 (.1) AT5G13700 92 / 6e-19 ATPAO1, APAO polyamine oxidase 1 (.1) AT1G63370 51 / 9e-06 Flavin-binding monooxygenase family protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.002G027100 [exp] 3023 / 0 AT4G16310 1504 / 0.0 LSD1-like 3 (.1) Potri.008G035200 [exp] 337 / 2e-97 AT3G10390 1152 / 0.0 FLOWERING LOCUS D, Flavin containing amine oxidoreductase family protein (.1) Potri.002G013100 [exp] 333 / 3e-97 AT1G62830 964 / 0.0 ARABIDOPSIS LYSINE-SPECIFIC HISTONE DEMETHYLASE, LSD1-like 1 (.1) Potri.010G227200 [exp] 330 / 4e-95 AT3G10390 1135 / 0.0 FLOWERING LOCUS D, Flavin containing amine oxidoreductase family protein (.1) Potri.011G127600 [exp] 312 / 2e-90 AT3G13682 959 / 0.0 LSD1-like2 (.1) Potri.004G075800 [exp] 232 / 1e-65 AT1G65840 728 / 0.0 polyamine oxidase 4 (.1) Potri.017G144001 [exp] 227 / 4e-64 AT1G65840 721 / 0.0 polyamine oxidase 4 (.1) Potri.005G207300 [exp] 212 / 7e-59 AT2G43020 820 / 0.0 polyamine oxidase 2 (.1) Potri.002G055300 [exp] 207 / 5e-57 AT2G43020 809 / 0.0 polyamine oxidase 2 (.1)
Flax homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10033928 [exp] 1780 / 0 AT4G16310 1391 / 0.0 LSD1-like 3 (.1) Lus10024311 [exp] 1406 / 0 AT4G16310 1471 / 0.0 LSD1-like 3 (.1) Lus10015996 [exp] 335 / 8e-98 AT1G62830 988 / 0.0 ARABIDOPSIS LYSINE-SPECIFIC HISTONE DEMETHYLASE, LSD1-like 1 (.1) Lus10017464 [exp] 337 / 2e-97 AT3G10390 1198 / 0.0 FLOWERING LOCUS D, Flavin containing amine oxidoreductase family protein (.1) Lus10012283 [exp] 334 / 3e-97 AT1G62830 984 / 0.0 ARABIDOPSIS LYSINE-SPECIFIC HISTONE DEMETHYLASE, LSD1-like 1 (.1) Lus10037885 [exp] 283 / 3e-80 AT3G13682 969 / 0.0 LSD1-like2 (.1) Lus10038587 [exp] 281 / 7e-80 AT3G13682 971 / 0.0 LSD1-like2 (.1) Lus10028817 [exp] 258 / 1e-73 AT3G10390 808 / 0.0 FLOWERING LOCUS D, Flavin containing amine oxidoreductase family protein (.1) Lus10029804 [exp] 209 / 6e-58 AT2G43020 790 / 0.0 polyamine oxidase 2 (.1) Lus10020726 [exp] 207 / 4e-57 AT2G43020 794 / 0.0 polyamine oxidase 2 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0123 [poplar] [flax] HTH PF04433 [poplar] [flax] SWIRM SWIRM domain CL0063 [poplar] [flax] NADP_Rossmann PF13450 [poplar] [flax] NAD_binding_8 NAD(P)-binding Rossmann-like domain
Representative CDS sequence Show only first row Show all	>Potri.005G235400.1 pacid=42802454 polypeptide=Potri.005G235400.1.p locus=Potri.005G235400 ID=Potri.005G235400.1.v4.1 annot-version=v4.1 ATGGAAAGTGATGATTTGTCGAATTGTAAGGATTTGGAAGCTAAGTTAGGGTCACAGAAGGGTTTGTCAAAGAATTTGTTGAAACCTAGGGTTAACAAAG GAATGGAGGAGCAGAAGGAATTGTTGGGGAAGCAAATTGAGTTTGGTATCGATTCAGATGATAATGAGCCTATTGGGTCTTTGTTCAGGTTGAAGAGACC TAGAAACCCTAAAAAGGTTAAGGTGGTTTTGGAGAAGATTGAAGTTAGGGAAGATAAATTGGTGACCGAGGATGAGGACTTGGGAGGAATGGATGATACA CTTGCGAGTTTTAAGAAGAAGTTGAAAGCTCCTAAGAAGGGTTTGGGATCTGTAAGTGCCATTCAAAATGAAGGTGATGAGTTATTGGATGGAAATGTGG AGAAAAAAGTACAAAACAAGCGTAAGGAGAGAGCGAGTAAAGTGGGGAGTGGTTGGAAGAGAGTGAGAACTGGGGGTGATGCTGCGGTTGATGATGATTC AGAGGGTTTGGGATCTCAGGGTGCTCTGTTAGAGAACCAAGAAGAGGAAAGTTTGTTGCCTGGTGAGAGTTCAAGTCAGTCTTTGGATAAGCTGGAAGAT TCAATATCAGCTTTTTATCAGAAGAAGCAATCGGGTTCGGTGAGGAAGTCTTGTGCAAATTCGAGTTCAAAGCAAATTAATAGGGTTCAGTGTTTGGAGG CCAGATTAAGCCCTGAAACTGGATTTGGTTCTGGGGGTTCCAAGGATGTGGATTTAAGTACATTCAGATCCAGTCCTGTCTCAAGTGTGGTCTGCAAAGA TCTGGAAGGTGGAGACAGTTCCCATATAGTTGCCAATTCGAGTTTGTTAGATTCTACCTCTAGACAAATTTTGAATACAAAAAACCAGAGGCTTGATAAT GGGTTTGGTGAAACTTCCTATTGCATAGAAGAAAACTCTGATAGAATCAAAGGGCTCTCTGTGAGCAAGGATGAAAGTATGAAATCCAATGACAAGAGAC ATGGTAAATCTTCAGAAGTTACTGCTGAGGTTGCTGCACCCGCATCTCCAGCATTGGGATCTCAACATGGGGTGATTGAAGATGAAGAAACGCAGGACCC ATGCATCTCAGATTTTAAAGGGGAACCTATGGGGAAACCTTGTAGTCCATATAGAATTTGGAATGAAAGTCATTCCGCTCCAGGCAATAATGATGGCTTG GAAGCTCAAACTTTAAAGAATGGGTTAAAGCTTTGTTCTGTGGGTAAAGTAAGCACGAGGAACACATTAGAACAACAATCTAAGGGTGTTTCAGCCGCAT GCATTTCAAATGCAGAACCTCAAATTTCAATATCTTCAGGCGGAAGAGAAGTCTCAGCCTCCTCTAGCCCTCATAGTCAAAATGATCTGCAGGATCTTGC TTCAGTTCCAAAAAAGGAAAATGTCGAAATATCTGATGTTAGGTTATCACCTTTTACTGTAACATCCAGAGAAGTCCACAAATGTACATTTTCTTTGTGC ATGAACCACAATGGGAACTCCTTGGATTATCTTTCCATCAATGAAGAGGCCAATGGACCATCTCCTCGATCTTTAACTCCAGAAGAAAATGAAAGTTATC CAGAAGATGCTGTATCAGTGCCAGATTCTGACATCAAAGATGGTCACTTAGCAGCTGTACATCGTGCTATGCGGAAGCCCAAAAAGCGTAGACTTGGAGA CATGGCTTATGAAGGGGATGCTGATTGGGAGACTTTGATAAATGAGCAACAATTTCTGGAAAATTACCAGGTTGTTGAAAGTGACCGATCTTTTAGAACC AGAGAGAAGTCTGATTCTTCTTCAAATAGTGCTGAGGCTGAAAATGGCGGGATCGCAGCAGTTTCAGCTGGATTGAAAGCACGTGCAGCAGGTCCAGTTG AAAAGATCAAGTTTAAGGAGGTCTTAAAGCGCAAAGGTGGGCTTCAAGAATATTTGGAGTGCAGGAATCGGATATTGGGTCTTTGGAGCAAAGACGTTAG CCGTATATTGCCTCTTGCAGACTGTGGCATCACTGAGACTCCTTCCCAGAATGAATCTCCCCGTGCTTCTTTAATAAGGCAAATCTATGAATTTCTTGAT CAGAGTGGCTATATAAATGCTGGAATTGCTTCTGAGAAAGAGAGTGCAGAACCTAGTGCCAATCACAATTATAAACTTGTCGAAGAAAAAACTTTTGAGG GAAATCCTGGAGCTTCAGTAGCCGATTTAGAAGATGGGGTCTCCTTTATCCTTGGTCAGGTTAAAAGTTCTCAAAATTCCTTGGAGCCAAAGGACAGAGT TCCAATGGATAACCAAGACCTGGCATTGAAAGCTTTGAAAAGTGGGAAGCTTGTTGATTTACCCAATGTCAAGGAATGTGAAGAATGGCCAGCTGAAGAT ATTAAGCAAAATAGTGTTAGCAATACAAAGTTATCTAATGGGCTGGCCAGTTTGGATGCTTTGAGTACTGATCCATCTTGCACAATGCTGGATAGCAGGA CGGCCCCTGTAATAAATCCAGAGTTAAGGAATGGCTTGCAGAGTGTTAAATCTAACTCTTGTGCTGAAATGGGAGGAAGTCATAAATTGCTGTGTGATTC CCAAGACAGAAAGAAAATAATTGTCATTGGAGCTGGTCCTGCTGGCTTAACTGCTGCACGTCACTTGCAACGTCAGGGTTTTTCTGTCACTATACTCGAG GCTCGGAGTAGAATTGGTGGTCGTGTTTATACAGATCACTCATCTCTTTCAGTCCCTGTAGATCTTGGGGCTAGTATTATAACTGGAGTTGAGGCTGATG TGACTACTGAAAGAAGACCAGACCCTTCCTCATTGATTTGTGCTCAGTTGGGCCTTGAGCTGACTGTGCTAAATAGTGACTGTCCTCTTTATGATATTGT GACTGGAGAAAAGGTTCCTACAGATCTGGATGAAGAATTGGAAGCAGAGTACAACAGCCTTCTTGATGACATGGTCTTGGTTATTGCTCAGAAAGGGCAA CATGCTATGAAAATGTCTCTGGAGGATGGTTTAAACTATGCCCTCAAGACACGTCGCATGGTACACCCTGGAGCCTTTTTCGATGAAACTGAATCAGGAA ATGCAGTGGATGCTTTATATGATTCCAAAACTTGTAGTGTTGATGGTGGAGCTCCTGAGAATTCCAAAGAGGAGATTCTGAGTCCTCTTGAGAGGAGGGT TATGGATTGGCATTTTGCTCATTTGGAGTATGGTTGTGCTGCTTCTCTCAAGGAAGTTTCTCTTCCCTACTGGAATCAAGATGATGTTTATGGAGGATTT GGAGGAGCTCATTGTATGATTAAAGGGGGTTACAGTAATGTTGTCGAGTCTCTTGGGGAACGACTCCCCATTCACTTGAACCATGTAGTCACAGATATTT CATATGGCATCAAAGATGCTAGAGCAAGCGTGAGTCATCGTAGCAAAGTCAAAGTCTGCACCTCGAATGGTAGCGAGTTTTTGGGAGATGCTGTGCTGAT TACCGTGCCTCTTGGGTGCCTGAAAGCAGAAGCCATCAAGTTTTCCCCTCCATTACCGCAATGGAAACGTTCTTCCATTCAGCGACTTGGTTTTGGAGTT CTTAATAAAGTAGTCCTTGAATTTCCAGATGTTTTCTGGGATGATTCAATGGATTACTTTGGTGCGACTGCTGAGGAAACTGATCGGAGGGGTCATTGTT TTATGTTCTGGAATGTCAAGAAAACTGTTGGGGCTCCTGTTCTTATAGCCCTAGTGGCTGGTAAGGCAGCTATTGATGGCCAAAGAATGAGCTCGTCTGA TCATGTAAGTCATGCACTAATGGTTCTTCGTAAACTTTTTGGGGAGGCTTTGGTACCTGATCCAGTTGCATCAGTGGTGACTGATTGGGGCAGGGATCCT TTCAGCTATGGTGCTTACTCCTATGTTGCCATTGGATCATCTGGAGAAGACTATGATATATTAGGCAGGCCTGTTGAGAACTGTGTATTTTTTGCGGGTG AAGCCACCTGCAAGGAGCATCCAGACACGGTTGGTGGTGCTATGATGAGTGGACTCCGGGAGGCAGTGCGTATAATTGACATATTGAGTATGGGAACTGA TTTTACGACAGAAGTAGAGGCAATGGAGGGGGCACAGAGACACTCAGAGGTTGAACGCGATGAAGTTAGAGACATAACAAAGAGACTTGAGGCAGTTGAG CTGTCCAATGTATTGTATAAGAATTCTCTAGATCGGGCCAGGCTTTTAACCAGGGAAGCTTTACTACGAGACATGTTCTTCAGTGCAAAAACCATCGCAG GACGTTTGCATCTGGCCAAAAAATTGTTGAATCTTCCTGTTGGAACTTTGAAGTCCTTTGCTGGGACCAGGAAAGGGCTTGCTATGCTCAACTCATGGAT TCTGGACTCAATGGGGAAGGATGGGACTCAACTCTTGCGTCACTGTGTTCGTCTTCTTGTGCTTGTTTCAACTGATTTACTTGCTGTGCGTTTGTCAGGC ATAGGGAAAACAGTGAAAGAAAAAGTGTGTGTGCACACAAGCCGTGATATACGTGCCATAGCAAGTCAGCTGGTTAGTGTGTGGCTTGAAGTCTTCCGCA GGGAAAAAGCTTCAAATGGTGGGGTAAAGTTATCAAGGCATGCAACTGCATTGGAGTCTTCAAAGAGGAAATCTTTCAACAATTCAACCTCACGAAAGCC ACCTTTGCACGCTCATCATGGTGCTTTGGAGAATAGTGGCAATCTGCAGGTTTCTACATCGACTAGAGGCCCCTTGCCATCAAACTCTAACATGGAAAAA GCAAAGAGCAAGCCAGAAACTCTGAAATGCTCAAGCAGACTGGGTATTGAGGTAGAGGAGGGTAACACAATTGCCATCTCTGAAGAAGAACAGGCTGCCT TAGCTGCAGAGGAGGCAGCTCGTGCTGCTGCCCATGTAGCTGCCCAGGCATATGCATCATCAGAAGCCAAGTTTAGCACATTGGTGCAGCTGCCTAAGAT ACCCTCATTTCACAAATTTGCTAGACGGGAACAATATGCACAGATGGATGAATATGATCTCAGAAGAAAGTGGTCTGGTGGTGTTCTGGGAAAACAAGAC TGTATATCAGAAACTGACTCAAGAAATTGCAGGGTTAGGGACTGGTCTGTTGATTTCTCTGCTGCCTATGCTAACTTTGATAGTTCAAGAATGTCGGGTG ATAACCTATCTCAGCGGAGCCATTCAAATGAGATTGCTTCACATATGAGTTTTAGAGAGCAGTCTGGAGAAAGTACAGCGGTGGACAGTAGCCTTTTTAC AAAAGCATGGGTGGATACTGCTGGTAGTGCAGGGATAAAGGGCTATCATGCCATTGAGAGATGGCAATGTCAGGCAGCGGCAGCTGATTCAGATTTTTTC CATCGGGCCATGCATATAAAAGATGAAGAGGATTCAAACACAAGTTCTAGACCACCTACCTGGAAGCATGATGGACGAGCAAATGAGAGCTCCATCTCAC AGGTCACTGTAAACAACGAGCCATCAAAACATCATTCTCGAGGTGCTGATCGTATTAAACAGGCTGTTGTTGATTTTGTTTCATCATTGCTCATGCCTGT TTATAAGGCTAGGAAAATTGACAAGGAGGGGTACAAATCAATAATGAAGAAAATATCAACTAAGGTCATGGAGAAGGCTACAGATATAGAAAAAGCCATG GCAGTTTCTGAGTTTCTTGATTCCAAGCGCAAGAATAAGATTCGTGCCTTTGTGGATAAATTGATTGAGAACCACATGGCAATGAAGCCAGCTGTTGAAC CTTGA
AA sequence Show only first row Show all	>Potri.005G235400.1 pacid=42802454 polypeptide=Potri.005G235400.1.p locus=Potri.005G235400 ID=Potri.005G235400.1.v4.1 annot-version=v4.1 MESDDLSNCKDLEAKLGSQKGLSKNLLKPRVNKGMEEQKELLGKQIEFGIDSDDNEPIGSLFRLKRPRNPKKVKVVLEKIEVREDKLVTEDEDLGGMDDT LASFKKKLKAPKKGLGSVSAIQNEGDELLDGNVEKKVQNKRKERASKVGSGWKRVRTGGDAAVDDDSEGLGSQGALLENQEEESLLPGESSSQSLDKLED SISAFYQKKQSGSVRKSCANSSSKQINRVQCLEARLSPETGFGSGGSKDVDLSTFRSSPVSSVVCKDLEGGDSSHIVANSSLLDSTSRQILNTKNQRLDN GFGETSYCIEENSDRIKGLSVSKDESMKSNDKRHGKSSEVTAEVAAPASPALGSQHGVIEDEETQDPCISDFKGEPMGKPCSPYRIWNESHSAPGNNDGL EAQTLKNGLKLCSVGKVSTRNTLEQQSKGVSAACISNAEPQISISSGGREVSASSSPHSQNDLQDLASVPKKENVEISDVRLSPFTVTSREVHKCTFSLC MNHNGNSLDYLSINEEANGPSPRSLTPEENESYPEDAVSVPDSDIKDGHLAAVHRAMRKPKKRRLGDMAYEGDADWETLINEQQFLENYQVVESDRSFRT REKSDSSSNSAEAENGGIAAVSAGLKARAAGPVEKIKFKEVLKRKGGLQEYLECRNRILGLWSKDVSRILPLADCGITETPSQNESPRASLIRQIYEFLD QSGYINAGIASEKESAEPSANHNYKLVEEKTFEGNPGASVADLEDGVSFILGQVKSSQNSLEPKDRVPMDNQDLALKALKSGKLVDLPNVKECEEWPAED IKQNSVSNTKLSNGLASLDALSTDPSCTMLDSRTAPVINPELRNGLQSVKSNSCAEMGGSHKLLCDSQDRKKIIVIGAGPAGLTAARHLQRQGFSVTILE ARSRIGGRVYTDHSSLSVPVDLGASIITGVEADVTTERRPDPSSLICAQLGLELTVLNSDCPLYDIVTGEKVPTDLDEELEAEYNSLLDDMVLVIAQKGQ HAMKMSLEDGLNYALKTRRMVHPGAFFDETESGNAVDALYDSKTCSVDGGAPENSKEEILSPLERRVMDWHFAHLEYGCAASLKEVSLPYWNQDDVYGGF GGAHCMIKGGYSNVVESLGERLPIHLNHVVTDISYGIKDARASVSHRSKVKVCTSNGSEFLGDAVLITVPLGCLKAEAIKFSPPLPQWKRSSIQRLGFGV LNKVVLEFPDVFWDDSMDYFGATAEETDRRGHCFMFWNVKKTVGAPVLIALVAGKAAIDGQRMSSSDHVSHALMVLRKLFGEALVPDPVASVVTDWGRDP FSYGAYSYVAIGSSGEDYDILGRPVENCVFFAGEATCKEHPDTVGGAMMSGLREAVRIIDILSMGTDFTTEVEAMEGAQRHSEVERDEVRDITKRLEAVE LSNVLYKNSLDRARLLTREALLRDMFFSAKTIAGRLHLAKKLLNLPVGTLKSFAGTRKGLAMLNSWILDSMGKDGTQLLRHCVRLLVLVSTDLLAVRLSG IGKTVKEKVCVHTSRDIRAIASQLVSVWLEVFRREKASNGGVKLSRHATALESSKRKSFNNSTSRKPPLHAHHGALENSGNLQVSTSTRGPLPSNSNMEK AKSKPETLKCSSRLGIEVEEGNTIAISEEEQAALAAEEAARAAAHVAAQAYASSEAKFSTLVQLPKIPSFHKFARREQYAQMDEYDLRRKWSGGVLGKQD CISETDSRNCRVRDWSVDFSAAYANFDSSRMSGDNLSQRSHSNEIASHMSFREQSGESTAVDSSLFTKAWVDTAGSAGIKGYHAIERWQCQAAAADSDFF HRAMHIKDEEDSNTSSRPPTWKHDGRANESSISQVTVNNEPSKHHSRGADRIKQAVVDFVSSLLMPVYKARKIDKEGYKSIMKKISTKVMEKATDIEKAM AVSEFLDSKRKNKIRAFVDKLIENHMAMKPAVEP

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DESeq2's median of ratios [POPLAR]

Mapped by: StringTie Salmon Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	NWA:WT	NWB:WT	NWA:OE-ARK2	NWB:OE-ARK2	NWA:miRNA-ARK2	NWB:miRNA-ARK2	NW 0hr	WT H20	WT-NW	TUA1dEY NW	TUA1dEY+TUB15 NW	TUA1dY+TUB9 NW	Pde NW	NWA:WT GA	NWBWT GA	TW:WT	TW:WT GA	NWA:OE-ARK2 GA	NWB:OE-ARK2 GA	TW:OE-ARK2	TW:OE-ARK2 GA	NWA:miRNA-ARK2 GA	NWB:miRNA-ARK2 GA	TW:miRNA-ARK2	TW:miRNA-ARK2 GA	TW 2hr	TW 8hr	TW 24hr	TW 48hr	TW 96hr	TW 336hr	WT ACC	35S::etr1-1 H20	35S::etr1-1 ACC	LMX5::etr1-1 H20	LMX5::etr1-1 ACC	WT-TW	TUA1dEY TW	TUA1dEY+TUB15 TW	TUA1dY+TUB9 TW	Pde TW	OW:WT	OW:WT GA	OW:OE-ARK2	OW:OE-ARK2 GA	OW:miRNA-ARK2	OW:miRNA-ARK2 GA	OW 2hr	OW 8hr	OW 24hr	OW 48hr	OW 96hr	OW 336hr	Root CTR	Root LongCold	Root LongDrougt	Root LongHeat	Root LongSalt	Root ShortCold	Root ShortDrougt	Root ShortHeat	Root ShortSalt	Ptr root	Leaf CTR	Leaf LongCold	Leaf LongDrougt	Leaf LongHeat	Leaf LongSalt	Leaf ShortCold	Leaf ShortDrougt	Leaf ShortHeat	Leaf ShortSalt	Ptr leaf	Stem CTR	Stem LongCold	Stem LongDrougt	Stem LongHeat	Stem LongSalt	Stem ShortCold	Stem ShortDrougt	Stem ShortHeat	Stem ShortSalt	Ptr shoot	Ptr xylem	Ptr phloem	Ptr fiber	Ptr vessel	Ptr fiber vessel ray
AT4G16310		LDL3	LSD1-like 3 (.1)		Potri.005G235400 [exp]	0	1
AT3G17740			unknown protein		Potri.015G033300 [exp]	1.73	0.9265
AT5G61990			Pentatricopeptide repeat (PPR)...		Potri.015G105400 [exp]	2.00	0.9249
AT3G45830			unknown protein		Potri.001G233800 [exp]	2.64	0.9232
AT5G23150		HUA2	ENHANCER OF AG-4 2, Tudor/PWWP...		Potri.005G092700 [exp]	3.16	0.9326
AT3G52250	MYB		Duplicated homeodomain-like su...		Potri.010G220000 [exp]	3.46	0.9245
AT5G60410		ATSIZ1, SIZ1	DNA-binding protein with MIZ/S...		Potri.010G219600 [exp]	4.35	0.9036
AT4G35800		RNA_POL_II_LSRN...	RNA polymerase II large subuni...		Potri.005G107600 [exp]	4.47	0.9248	Pt-RPB1.1
AT3G11540		SPY	SPINDLY, Tetratricopeptide rep...		Potri.006G208900 [exp]	5.65	0.9059	Pt-SPY.2
AT3G45830			unknown protein		Potri.009G026100 [exp]	5.65	0.9200
AT3G13300		VCS	VARICOSE, Transducin/WD40 repe...		Potri.001G469500 [exp]	7.41	0.9122	Pt-VCS.1

Compare expression of checked genes

Potri.005G235400 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.